Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388860 | AES75170.2 | 95.608 | 296 | 11 | 1 | 1 | 296 | 1 | 294 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388860 | sp|Q93YX4|APRL5_ARATH | 47.440 | 293 | 145 | 3 | 8 | 294 | 8 | 297 | 3.31e-93 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388860 | G7KPL3 | 95.608 | 296 | 11 | 1 | 1 | 296 | 1 | 294 | 0.0 | 568 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0298310 | Msa0388860 | 0.833854 | 4.198977e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388860 | MtrunA17_Chr6g0461321 | 95.608 | 296 | 11 | 1 | 1 | 296 | 60 | 353 | 0.0 | 567 |
| Msa0388860 | MtrunA17_Chr3g0115861 | 34.615 | 234 | 140 | 5 | 71 | 296 | 80 | 308 | 1.78e-34 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388860 | AT3G03860.1 | 47.440 | 293 | 145 | 3 | 8 | 294 | 8 | 297 | 3.37e-94 | 281 |
| Msa0388860 | AT5G18120.1 | 44.755 | 286 | 150 | 2 | 9 | 294 | 9 | 286 | 2.35e-83 | 253 |
| Msa0388860 | AT5G18120.2 | 48.333 | 240 | 116 | 2 | 55 | 294 | 8 | 239 | 1.40e-79 | 241 |
| Msa0388860 | AT5G18120.3 | 50.450 | 222 | 102 | 2 | 73 | 294 | 10 | 223 | 1.59e-75 | 231 |
| Msa0388860 | AT1G34780.1 | 33.766 | 231 | 137 | 5 | 67 | 291 | 78 | 298 | 1.13e-34 | 128 |
| Msa0388860 | AT4G08930.1 | 31.950 | 241 | 134 | 7 | 53 | 286 | 61 | 278 | 8.47e-26 | 103 |
| Msa0388860 | AT1G34780.2 | 29.004 | 231 | 119 | 6 | 67 | 291 | 78 | 269 | 5.26e-21 | 90.9 |
Find 100 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCACGTCTCCGAGCTTTC+TGG | 0.132242 | 3_1:-93332940 | Msa0388860:CDS |
| GAACTAAGAGCTTCAAATTT+AGG | 0.163201 | 3_1:+93334031 | None:intergenic |
| TGCAGCTTATATTCAAAATA+TGG | 0.207828 | 3_1:-93333416 | Msa0388860:intron |
| AGCTCTTAGTTCCATGTTTC+CGG | 0.212131 | 3_1:-93334020 | Msa0388860:CDS |
| GTCTTTGGCTTCTGTTTCTC+TGG | 0.219543 | 3_1:-93332753 | Msa0388860:CDS |
| GGAAGCATTCTGCGGGAAAA+TGG | 0.226560 | 3_1:+93334052 | None:intergenic |
| GGGCAAGGAGTGCTCGGGTT+TGG | 0.250181 | 3_1:-93332781 | Msa0388860:CDS |
| ATAACCAAATGCTCTATTTC+CGG | 0.269637 | 3_1:+93334001 | None:intergenic |
| GGCAAGGAGTGCTCGGGTTT+GGG | 0.269943 | 3_1:-93332780 | Msa0388860:CDS |
| TCGGGTTTGGGCTTCGTCTT+TGG | 0.276429 | 3_1:-93332768 | Msa0388860:CDS |
| AATTTGCAGCTTAGTATAAT+AGG | 0.291127 | 3_1:+93338338 | None:intergenic |
| CTATACTCTTCTATGCTTCC+TGG | 0.293178 | 3_1:-93334078 | Msa0388860:CDS |
| TGGAGGGATGCAGGCGGAGG+CGG | 0.319091 | 3_1:+93338121 | None:intergenic |
| ATCACGTCTCCGAGCTTTCT+GGG | 0.321911 | 3_1:-93332939 | Msa0388860:CDS |
| GCAGGCGGAGGCGGAGGCGG+AGG | 0.326385 | 3_1:+93338130 | None:intergenic |
| ACAGACCCATCAACGATTTC+AGG | 0.327489 | 3_1:+93333056 | None:intergenic |
| TGATTGATGTGAGGAGGATT+TGG | 0.333705 | 3_1:-93332844 | Msa0388860:CDS |
| CCAATCCAATCCTCCTCTTC+AGG | 0.337351 | 3_1:-93338051 | Msa0388860:intron |
| GAGGATGGAGAAAGCGGTTA+TGG | 0.344033 | 3_1:+93338160 | None:intergenic |
| CTGTGATGTTTATCTGTTTG+AGG | 0.349811 | 3_1:-93332991 | Msa0388860:CDS |
| GATGCAGGCGGAGGCGGAGG+CGG | 0.355913 | 3_1:+93338127 | None:intergenic |
| GTTTCCGGAAATAGAGCATT+TGG | 0.357492 | 3_1:-93334005 | Msa0388860:CDS |
| GGCGGAGGCGGAGGCGGAGG+TGG | 0.363874 | 3_1:+93338133 | None:intergenic |
| AGGGATGCAGGCGGAGGCGG+AGG | 0.368568 | 3_1:+93338124 | None:intergenic |
| GGATGGGAAATAAGTGAAAA+AGG | 0.386956 | 3_1:+93338224 | None:intergenic |
| TAGTATAATAGGAATTGAAT+TGG | 0.391769 | 3_1:+93338349 | None:intergenic |
| TGAGGGTAAAACGGGAATAA+AGG | 0.399895 | 3_1:+93338247 | None:intergenic |
| GGAAGGTGGTGGAGGGATGC+AGG | 0.404744 | 3_1:+93338112 | None:intergenic |
| TCGGAGACGTGATACGATCT+TGG | 0.417626 | 3_1:+93332949 | None:intergenic |
| ATAGGAATTGAATTGGGAAA+TGG | 0.418259 | 3_1:+93338356 | None:intergenic |
| CCTGAACCTGAAATCGTTGA+TGG | 0.418788 | 3_1:-93333062 | Msa0388860:CDS |
| TGGTGGAGGGATGCAGGCGG+AGG | 0.419701 | 3_1:+93338118 | None:intergenic |
| AGGCGGAGGCGGAGGTGGAT+TGG | 0.425354 | 3_1:+93338138 | None:intergenic |
| CCATCAACGATTTCAGGTTC+AGG | 0.436117 | 3_1:+93333062 | None:intergenic |
| TTCGTTGACGAAGTTCTATC+TGG | 0.441060 | 3_1:-93334124 | Msa0388860:CDS |
| AGTATAATAGGAATTGAATT+GGG | 0.442056 | 3_1:+93338350 | None:intergenic |
| CATGTTCAGATGAGGAATAC+AGG | 0.444748 | 3_1:+93332913 | None:intergenic |
| TCTTCACTCATCATGCTGCT+TGG | 0.446640 | 3_1:+93333094 | None:intergenic |
| GAAGCATTCTGCGGGAAAAT+GGG | 0.446680 | 3_1:+93334053 | None:intergenic |
| CATCTGAACATGCAAATATT+CGG | 0.449743 | 3_1:-93332902 | Msa0388860:CDS |
| AGGATTGGATTGGATGAAGA+TGG | 0.454397 | 3_1:+93338061 | None:intergenic |
| ATTTGATTTATTCAGGTGGA+TGG | 0.455758 | 3_1:-93334151 | Msa0388860:intron |
| TTCCCATCCCTACCCTTCCA+TGG | 0.456136 | 3_1:-93338210 | Msa0388860:exon |
| AAGAGAAAGGAAGGTGGTGG+AGG | 0.459693 | 3_1:+93338104 | None:intergenic |
| CGGAGGCGGAGGTGGATTGG+AGG | 0.463555 | 3_1:+93338141 | None:intergenic |
| TGAAGATGAAAGAGAAAGGA+AGG | 0.466413 | 3_1:+93338095 | None:intergenic |
| TCTTTGGCTTCTGTTTCTCT+GGG | 0.469374 | 3_1:-93332752 | Msa0388860:CDS |
| CATCACAGAGAAAACTAAGT+AGG | 0.470439 | 3_1:+93333006 | None:intergenic |
| AGTTTGAAGATGAAAGAGAA+AGG | 0.472257 | 3_1:+93338091 | None:intergenic |
| GTGGTGTGTGTTTGTGGCGG+TGG | 0.480685 | 3_1:+93338285 | None:intergenic |
| AGGTGGTGGAGGGATGCAGG+CGG | 0.482320 | 3_1:+93338115 | None:intergenic |
| TGAAAGAGAAAGGAAGGTGG+TGG | 0.486413 | 3_1:+93338101 | None:intergenic |
| AGGAACCTGAAGAGGAGGAT+TGG | 0.486992 | 3_1:+93338046 | None:intergenic |
| GTGGCGGTGGTTGAATTTGA+CGG | 0.488363 | 3_1:+93338298 | None:intergenic |
| GCCCTCATAACGACATTGTA+AGG | 0.490223 | 3_1:+93332683 | None:intergenic |
| ACGAGAGGGCAAGGAGTGCT+CGG | 0.491829 | 3_1:-93332787 | Msa0388860:CDS |
| TGGAAGAAGCGGAGAAGCCA+TGG | 0.492807 | 3_1:+93338193 | None:intergenic |
| GGTGTTGTGGTGTGTGTTTG+TGG | 0.502205 | 3_1:+93338279 | None:intergenic |
| CGAGAGGGCAAGGAGTGCTC+GGG | 0.502825 | 3_1:-93332786 | Msa0388860:CDS |
| AAGGTTGTTAGTTCAAACCT+TGG | 0.506273 | 3_1:+93332702 | None:intergenic |
| TACAGGAAACCCAGAAAGCT+CGG | 0.508316 | 3_1:+93332930 | None:intergenic |
| AAGCCATGGAAGGGTAGGGA+TGG | 0.509686 | 3_1:+93338207 | None:intergenic |
| CGGAGACGTGATACGATCTT+GGG | 0.511733 | 3_1:+93332950 | None:intergenic |
| CGGAGAAGCCATGGAAGGGT+AGG | 0.511902 | 3_1:+93338202 | None:intergenic |
| GATATCTCAACCTTGAGGTC+TGG | 0.512424 | 3_1:+93333360 | None:intergenic |
| TGGTTCACGAGTATAATAGA+AGG | 0.513250 | 3_1:+93333380 | None:intergenic |
| GAAGCACACGTCCCATCACT+TGG | 0.519068 | 3_1:+93332870 | None:intergenic |
| CCTGAAGAGGAGGATTGGAT+TGG | 0.519427 | 3_1:+93338051 | None:intergenic |
| CGGCGAGACAAGCCAAGTGA+TGG | 0.520311 | 3_1:-93332882 | Msa0388860:CDS |
| TTCAAGCTGTAGGTGATGCT+TGG | 0.521340 | 3_1:-93332628 | Msa0388860:intron |
| AGGAGGATTTGGACAAAGCT+AGG | 0.531228 | 3_1:-93332833 | Msa0388860:CDS |
| GGATTGGATTGGATGAAGAT+GGG | 0.534080 | 3_1:+93338062 | None:intergenic |
| GGCGGAGGTGGATTGGAGGA+TGG | 0.537391 | 3_1:+93338145 | None:intergenic |
| AGAGAAAGGAAGGTGGTGGA+GGG | 0.538699 | 3_1:+93338105 | None:intergenic |
| ATGCTCTATTTCCGGAAACA+TGG | 0.539291 | 3_1:+93334009 | None:intergenic |
| ATCACAGAGAAAACTAAGTA+GGG | 0.552653 | 3_1:+93333007 | None:intergenic |
| AAATTTAGGAAGCATTCTGC+GGG | 0.564708 | 3_1:+93334045 | None:intergenic |
| AGCCATGGAAGGGTAGGGAT+GGG | 0.583197 | 3_1:+93338208 | None:intergenic |
| CAAATTTAGGAAGCATTCTG+CGG | 0.584243 | 3_1:+93334044 | None:intergenic |
| TACTCGTGAACCAGACCTCA+AGG | 0.584811 | 3_1:-93333370 | Msa0388860:CDS |
| AATATTTGCATGTTCAGATG+AGG | 0.592345 | 3_1:+93332905 | None:intergenic |
| GGCGAGACAAGCCAAGTGAT+GGG | 0.592459 | 3_1:-93332881 | Msa0388860:CDS |
| TTCGGAAGAGGAACCTGAAG+AGG | 0.593703 | 3_1:+93338038 | None:intergenic |
| CTGAACCTGAAATCGTTGAT+GGG | 0.599456 | 3_1:-93333061 | Msa0388860:CDS |
| TCAGCTAGATAATCATTCCA+AGG | 0.599525 | 3_1:-93332719 | Msa0388860:exon |
| GGAGAAGCCATGGAAGGGTA+GGG | 0.599980 | 3_1:+93338203 | None:intergenic |
| AGAAGCGGAGAAGCCATGGA+AGG | 0.602273 | 3_1:+93338197 | None:intergenic |
| TCTGCGGGAAAATGGGCACC+AGG | 0.602668 | 3_1:+93334060 | None:intergenic |
| AGCAATCATCAGCTTTACCA+AGG | 0.608417 | 3_1:-93333976 | Msa0388860:intron |
| GGATTGGAGGATGGAGAAAG+CGG | 0.609036 | 3_1:+93338154 | None:intergenic |
| ACCTCAAGGTTGAGATATCG+TGG | 0.618624 | 3_1:-93333356 | Msa0388860:CDS |
| GAAGCGGAGAAGCCATGGAA+GGG | 0.633446 | 3_1:+93338198 | None:intergenic |
| AGATGAAAGAGAAAGGAAGG+TGG | 0.641265 | 3_1:+93338098 | None:intergenic |
| TTCAAGTGATTGATGTGAGG+AGG | 0.644023 | 3_1:-93332850 | Msa0388860:CDS |
| GGAAGAGGAACCTGAAGAGG+AGG | 0.646944 | 3_1:+93338041 | None:intergenic |
| GTATAATAGAAGGCAGACGA+TGG | 0.656284 | 3_1:+93333390 | None:intergenic |
| AGCTAGGACTATGCAAGACG+AGG | 0.667492 | 3_1:-93332817 | Msa0388860:CDS |
| GTTGTGGTGTGTGTTTGTGG+CGG | 0.671663 | 3_1:+93338282 | None:intergenic |
| TGCTTCAAGTGATTGATGTG+AGG | 0.686871 | 3_1:-93332853 | Msa0388860:CDS |
| ACCACGATATCTCAACCTTG+AGG | 0.689343 | 3_1:+93333355 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAGATAGAAAAATTA+GGG | + | chr3_1:93332967-93332986 | None:intergenic | 10.0% |
| !! | TTATTATTATTATGTGAAAT+TGG | - | chr3_1:93333119-93333138 | Msa0388860:CDS | 10.0% |
| !! | AAAATATTAATTTACTTTAG+TGG | - | chr3_1:93333261-93333280 | Msa0388860:intron | 10.0% |
| !!! | AAATTTTATTTTGAATGAAT+TGG | - | chr3_1:93334000-93334019 | Msa0388860:CDS | 10.0% |
| !! | TTAAATTTAAATAAAAATGC+CGG | + | chr3_1:93336653-93336672 | None:intergenic | 10.0% |
| !! | ATTGATTAAAAATTACTTAA+TGG | + | chr3_1:93337185-93337204 | None:intergenic | 10.0% |
| !!! | TTAATCAATTTTTTAAAAAC+CGG | - | chr3_1:93337196-93337215 | Msa0388860:intron | 10.0% |
| !! | GAAAATTAGATAGAAAAATT+AGG | + | chr3_1:93332968-93332987 | None:intergenic | 15.0% |
| !!! | TTTGATTTATTATGTGAAAA+TGG | - | chr3_1:93333297-93333316 | Msa0388860:intron | 15.0% |
| !!! | TGGTAATTTGATTTTAAAAA+TGG | - | chr3_1:93333843-93333862 | Msa0388860:intron | 15.0% |
| !!! | TACACTTTTATAATCAATTT+TGG | - | chr3_1:93334273-93334292 | Msa0388860:intron | 15.0% |
| !! | TAAAATGTGAATTGTATAAT+TGG | + | chr3_1:93334316-93334335 | None:intergenic | 15.0% |
| !!! | TTCATGTAATATTTTTAGTT+TGG | - | chr3_1:93334407-93334426 | Msa0388860:intron | 15.0% |
| !!! | ATTTTTAGTTTGGAATTTTT+TGG | - | chr3_1:93334417-93334436 | Msa0388860:intron | 15.0% |
| !! | AAATAAAAGTTATAGGAAAT+GGG | + | chr3_1:93335174-93335193 | None:intergenic | 15.0% |
| !! | AAAATAAAAGTTATAGGAAA+TGG | + | chr3_1:93335175-93335194 | None:intergenic | 15.0% |
| !!! | ATTTCCTATAACTTTTATTT+TGG | - | chr3_1:93335174-93335193 | Msa0388860:intron | 15.0% |
| !! | ACAGACTTAAAAATTAATTT+AGG | - | chr3_1:93335548-93335567 | Msa0388860:intron | 15.0% |
| !! | ATAAATCTAATACTATTCAT+AGG | + | chr3_1:93336016-93336035 | None:intergenic | 15.0% |
| !!! | AATCTGAATTTTGAATTAAT+TGG | - | chr3_1:93336040-93336059 | Msa0388860:intron | 15.0% |
| !! | AGGTATAAATTTACATTATA+AGG | + | chr3_1:93337807-93337826 | None:intergenic | 15.0% |
| !! | AGTATAATAGGAATTGAATT+GGG | + | chr3_1:93332632-93332651 | None:intergenic | 20.0% |
| !! | TAGTATAATAGGAATTGAAT+TGG | + | chr3_1:93332633-93332652 | None:intergenic | 20.0% |
| !!! | ATTTTCATGATTTTTGATAC+AGG | - | chr3_1:93332982-93333001 | Msa0388860:CDS | 20.0% |
| !!! | TAAAGATACAAATTTGTTAG+TGG | - | chr3_1:93333528-93333547 | Msa0388860:intron | 20.0% |
| !!! | AAAGATACAAATTTGTTAGT+GGG | - | chr3_1:93333529-93333548 | Msa0388860:intron | 20.0% |
| !! | TTGAGCTTATTCAAATAAAT+AGG | + | chr3_1:93333577-93333596 | None:intergenic | 20.0% |
| !!! | TTTTGATTAGTATGTGAAAA+TGG | - | chr3_1:93333730-93333749 | Msa0388860:intron | 20.0% |
| !! | AATTAAGCACTAATATTTGT+CGG | - | chr3_1:93333792-93333811 | Msa0388860:intron | 20.0% |
| !! | AAAAATGGATAATAATTAGC+TGG | - | chr3_1:93333858-93333877 | Msa0388860:intron | 20.0% |
| !!! | AATTTCTGATTTTGTAGAAT+TGG | - | chr3_1:93334344-93334363 | Msa0388860:intron | 20.0% |
| !!! | ATTTCTGATTTTGTAGAATT+GGG | - | chr3_1:93334345-93334364 | Msa0388860:intron | 20.0% |
| !!! | TTTTGTATGAATTGGTATAT+CGG | - | chr3_1:93334598-93334617 | Msa0388860:intron | 20.0% |
| !!! | AAAAGAGTAAACATTCATTT+TGG | + | chr3_1:93334963-93334982 | None:intergenic | 20.0% |
| !!! | GTCTGATTTTTTTGTTTTAA+CGG | - | chr3_1:93335830-93335849 | Msa0388860:intron | 20.0% |
| !!! | TGTTGGCTTAAATATTATAT+GGG | - | chr3_1:93335886-93335905 | Msa0388860:intron | 20.0% |
| !!! | GTTGGATTTAAAATGTTTAT+TGG | - | chr3_1:93335963-93335982 | Msa0388860:intron | 20.0% |
| !!! | TTTTATTGAGTTCAAGAAAA+TGG | - | chr3_1:93336066-93336085 | Msa0388860:intron | 20.0% |
| !!! | TATTTTTTGGTTCATTTTGT+TGG | - | chr3_1:93336157-93336176 | Msa0388860:intron | 20.0% |
| !!! | TTTTATTGAAAGATTGAGAA+AGG | + | chr3_1:93336439-93336458 | None:intergenic | 20.0% |
| !! | GGTATGATATATTAATTGTT+AGG | + | chr3_1:93336494-93336513 | None:intergenic | 20.0% |
| !!! | ACTTTTCATTTGATTTATTC+AGG | - | chr3_1:93336821-93336840 | Msa0388860:intron | 20.0% |
| !!! | GTTTTAAAAATATAGCATAC+TGG | - | chr3_1:93337117-93337136 | Msa0388860:intron | 20.0% |
| !! | TTTATAATCAAATTCAACTG+TGG | + | chr3_1:93337281-93337300 | None:intergenic | 20.0% |
| !! | GTAAGTAAGTATTAAAAAGA+AGG | - | chr3_1:93337319-93337338 | Msa0388860:intron | 20.0% |
| !!! | TTTTATTTTAGTAGAACCTA+TGG | - | chr3_1:93337476-93337495 | Msa0388860:intron | 20.0% |
| ! | AATTTGCAGCTTAGTATAAT+AGG | + | chr3_1:93332644-93332663 | None:intergenic | 25.0% |
| ! | TAGATAGAAAAATTAGGGTT+CGG | + | chr3_1:93332962-93332981 | None:intergenic | 25.0% |
| !!! | ATACTAATTTGTTCGATACT+GGG | - | chr3_1:93333142-93333161 | Msa0388860:intron | 25.0% |
| ! | TGTGAAAATGGATGATAATT+AGG | - | chr3_1:93333309-93333328 | Msa0388860:CDS | 25.0% |
| ! | CCTATAGCAAAATAGATTTA+GGG | - | chr3_1:93333423-93333442 | Msa0388860:intron | 25.0% |
| ! | AAAATAAGCCTATTCCAAAT+GGG | - | chr3_1:93333595-93333614 | Msa0388860:intron | 25.0% |
| !!! | AATTGAGTTGAATGTAAAAG+TGG | - | chr3_1:93333695-93333714 | Msa0388860:intron | 25.0% |
| ! | ACTTACAAAATTAACCACTA+TGG | - | chr3_1:93333937-93333956 | Msa0388860:intron | 25.0% |
| !!! | CATAATCTATTTTTCCATAG+TGG | + | chr3_1:93333954-93333973 | None:intergenic | 25.0% |
| !!! | GAAGTGAGTTTTTTTTTTGA+AGG | - | chr3_1:93334092-93334111 | Msa0388860:CDS | 25.0% |
| !!! | TTTCAAGTTAGAATCAATTC+AGG | - | chr3_1:93334198-93334217 | Msa0388860:intron | 25.0% |
| !! | GAGGAAAAGTCAATTTTTAT+TGG | - | chr3_1:93334220-93334239 | Msa0388860:intron | 25.0% |
| !!! | ATAATTGGTTCCAATTTTAG+CGG | + | chr3_1:93334301-93334320 | None:intergenic | 25.0% |
| ! | ATTGGGAATAACATAAGTAT+TGG | - | chr3_1:93334362-93334381 | Msa0388860:intron | 25.0% |
| !!! | TAACATAAGTATTGGAGTAA+AGG | - | chr3_1:93334370-93334389 | Msa0388860:intron | 25.0% |
| !!! | ATTTTTTGTTTCCACTTTAG+AGG | - | chr3_1:93334506-93334525 | Msa0388860:intron | 25.0% |
| !!! | TTTGTGCTTTTTGTATGAAT+TGG | - | chr3_1:93334590-93334609 | Msa0388860:intron | 25.0% |
| ! | TTTGTATGAATTGGTATATC+GGG | - | chr3_1:93334599-93334618 | Msa0388860:intron | 25.0% |
| ! | ATTTAATAAAGCCTTACTAG+TGG | - | chr3_1:93334708-93334727 | Msa0388860:intron | 25.0% |
| !! | AATGAATGTTTACTCTTTTG+TGG | - | chr3_1:93334964-93334983 | Msa0388860:intron | 25.0% |
| !! | TTTTGTGGAAAATAAGATGA+TGG | - | chr3_1:93334979-93334998 | Msa0388860:intron | 25.0% |
| ! | CACACCAAAATAAAAGTTAT+AGG | + | chr3_1:93335181-93335200 | None:intergenic | 25.0% |
| !!! | CTATAACTTTTATTTTGGTG+TGG | - | chr3_1:93335179-93335198 | Msa0388860:intron | 25.0% |
| ! | TAAAAATGTGAAGTGAACAT+CGG | - | chr3_1:93335269-93335288 | Msa0388860:intron | 25.0% |
| !!! | ATTTTTAAGTCTGTGAATTC+AGG | + | chr3_1:93335542-93335561 | None:intergenic | 25.0% |
| !! | TTCTTTTTATATGCTTAGCA+TGG | - | chr3_1:93335634-93335653 | Msa0388860:intron | 25.0% |
| !! | ATCTAAAACCTTAAGCTATT+AGG | - | chr3_1:93335691-93335710 | Msa0388860:intron | 25.0% |
| ! | CAAATTAAGAAATCCCTTAT+CGG | + | chr3_1:93335764-93335783 | None:intergenic | 25.0% |
| ! | TTCAAGAAGTTAATCAGAAA+AGG | - | chr3_1:93335859-93335878 | Msa0388860:intron | 25.0% |
| !!! | GTGTTGGCTTAAATATTATA+TGG | - | chr3_1:93335885-93335904 | Msa0388860:intron | 25.0% |
| !! | GTTGGCTTAAATATTATATG+GGG | - | chr3_1:93335887-93335906 | Msa0388860:intron | 25.0% |
| ! | TTGGCTTAAATATTATATGG+GGG | - | chr3_1:93335888-93335907 | Msa0388860:intron | 25.0% |
| ! | TTAAATATTATATGGGGGTT+AGG | - | chr3_1:93335893-93335912 | Msa0388860:intron | 25.0% |
| ! | TAAATATTATATGGGGGTTA+GGG | - | chr3_1:93335894-93335913 | Msa0388860:intron | 25.0% |
| ! | TTCTTCATTGCAAAATGATT+TGG | - | chr3_1:93335941-93335960 | Msa0388860:intron | 25.0% |
| !! | AAGAAAATGGTCTCTTTTTA+TGG | - | chr3_1:93336079-93336098 | Msa0388860:intron | 25.0% |
| ! | TTGGTGTAAAAATCAAAGAT+GGG | - | chr3_1:93336176-93336195 | Msa0388860:intron | 25.0% |
| ! | TATTAGTTAATGGGATAGTT+AGG | - | chr3_1:93336265-93336284 | Msa0388860:intron | 25.0% |
| ! | TAGGATTATCATGTATCAAT+AGG | - | chr3_1:93336284-93336303 | Msa0388860:intron | 25.0% |
| ! | AGGATTATCATGTATCAATA+GGG | - | chr3_1:93336285-93336304 | Msa0388860:intron | 25.0% |
| ! | TAGAATTGATATGAAAGGAA+TGG | + | chr3_1:93336466-93336485 | None:intergenic | 25.0% |
| ! | ATTCCTTTCATATCAATTCT+AGG | - | chr3_1:93336465-93336484 | Msa0388860:intron | 25.0% |
| ! | TTCCTTTCATATCAATTCTA+GGG | - | chr3_1:93336466-93336485 | Msa0388860:intron | 25.0% |
| ! | ATTAATATATCATACCATGC+TGG | - | chr3_1:93336498-93336517 | Msa0388860:intron | 25.0% |
| ! | AGTTTAAACATCTCGTAATT+TGG | - | chr3_1:93336709-93336728 | Msa0388860:intron | 25.0% |
| ! | AAAGTTAAATACTTTGTCGT+TGG | + | chr3_1:93336806-93336825 | None:intergenic | 25.0% |
| !! | TTTCATTTGATTTATTCAGG+TGG | - | chr3_1:93336824-93336843 | Msa0388860:intron | 25.0% |
| ! | AGGAAATTAAAAATAGAACC+GGG | + | chr3_1:93337042-93337061 | None:intergenic | 25.0% |
| ! | CAGGAAATTAAAAATAGAAC+CGG | + | chr3_1:93337043-93337062 | None:intergenic | 25.0% |
| ! | TGAGTTCATAATTATTATCC+AGG | + | chr3_1:93337062-93337081 | None:intergenic | 25.0% |
| !! | AAAAATATAGCATACTGGTT+CGG | - | chr3_1:93337122-93337141 | Msa0388860:intron | 25.0% |
| ! | TGCAGCTTATATTCAAAATA+TGG | - | chr3_1:93337563-93337582 | Msa0388860:intron | 25.0% |
| !! | TAAGTTTTCAAACAAGAATC+AGG | + | chr3_1:93337706-93337725 | None:intergenic | 25.0% |
| !!! | TATTTTGTACAGCCATTTTT+TGG | - | chr3_1:93337734-93337753 | Msa0388860:intron | 25.0% |
| ! | ATATAATATCTTCAAGCTGT+AGG | - | chr3_1:93338341-93338360 | Msa0388860:five_prime_UTR | 25.0% |
| ATAGGAATTGAATTGGGAAA+TGG | + | chr3_1:93332626-93332645 | None:intergenic | 30.0% | |
| GAAATAAGTGAAAAAGGTGA+GGG | + | chr3_1:93332752-93332771 | None:intergenic | 30.0% | |
| AGTTTGAAGATGAAAGAGAA+AGG | + | chr3_1:93332891-93332910 | None:intergenic | 30.0% | |
| ! | CAGGTGTAATTTTCATGATT+TGG | - | chr3_1:93333001-93333020 | Msa0388860:CDS | 30.0% |
| !! | GATACTAATTTGTTCGATAC+TGG | - | chr3_1:93333141-93333160 | Msa0388860:intron | 30.0% |
| ATGGATGATAATTAGGATAG+TGG | - | chr3_1:93333316-93333335 | Msa0388860:CDS | 30.0% | |
| AGTATTGTGTAGGAGATTTA+GGG | - | chr3_1:93333360-93333379 | Msa0388860:CDS | 30.0% | |
| CTTAATCTCATTAGTAGCAT+AGG | + | chr3_1:93333391-93333410 | None:intergenic | 30.0% | |
| GCCTATAGCAAAATAGATTT+AGG | - | chr3_1:93333422-93333441 | Msa0388860:intron | 30.0% | |
| !! | CCCTAAATCTATTTTGCTAT+AGG | + | chr3_1:93333426-93333445 | None:intergenic | 30.0% |
| CAAAATAAGCCTATTCCAAA+TGG | - | chr3_1:93333594-93333613 | Msa0388860:intron | 30.0% | |
| TAGATTCAAAGTTTGATCGA+TGG | - | chr3_1:93333760-93333779 | Msa0388860:intron | 30.0% | |
| AAAGTAGATTTAGCAAGTGT+TGG | - | chr3_1:93333823-93333842 | Msa0388860:intron | 30.0% | |
| GGATAATAATTAGCTGGTAT+AGG | - | chr3_1:93333864-93333883 | Msa0388860:intron | 30.0% | |
| AATAATTAGCTGGTATAGGT+TGG | - | chr3_1:93333868-93333887 | Msa0388860:intron | 30.0% | |
| ATAATTAGCTGGTATAGGTT+GGG | - | chr3_1:93333869-93333888 | Msa0388860:intron | 30.0% | |
| ! | GTTAATTTTGTAAGTTGCAG+AGG | + | chr3_1:93333932-93333951 | None:intergenic | 30.0% |
| ATAGATTATGTGTGTGTGTT+TGG | - | chr3_1:93333964-93333983 | Msa0388860:intron | 30.0% | |
| !! | AATTTTGGTACCGCTAAAAT+TGG | - | chr3_1:93334288-93334307 | Msa0388860:intron | 30.0% |
| TTATTGTAGTGTCCTTTCTT+TGG | - | chr3_1:93334474-93334493 | Msa0388860:intron | 30.0% | |
| AATCTACAAAGTCCAAAGAA+AGG | + | chr3_1:93334489-93334508 | None:intergenic | 30.0% | |
| ! | TTTTTCTGAGTTCATGATTG+AGG | - | chr3_1:93334685-93334704 | Msa0388860:intron | 30.0% |
| ! | CAATAAATTCATTGACTGTC+AGG | + | chr3_1:93334777-93334796 | None:intergenic | 30.0% |
| ATGACTATTATGAATCTGTG+AGG | - | chr3_1:93334917-93334936 | Msa0388860:intron | 30.0% | |
| TGACTATTATGAATCTGTGA+GGG | - | chr3_1:93334918-93334937 | Msa0388860:intron | 30.0% | |
| TTCCAACTATCAACTCAATT+TGG | + | chr3_1:93335217-93335236 | None:intergenic | 30.0% | |
| AGGAAGAAATAGAAACATGA+GGG | - | chr3_1:93335312-93335331 | Msa0388860:intron | 30.0% | |
| AGGTAACTAGTAAATGAAGT+AGG | - | chr3_1:93335376-93335395 | Msa0388860:intron | 30.0% | |
| ! | ATAGTGAATTTTCTCGTCTA+TGG | + | chr3_1:93335459-93335478 | None:intergenic | 30.0% |
| TCAAACTCAAAATGCTAAGA+AGG | - | chr3_1:93335609-93335628 | Msa0388860:intron | 30.0% | |
| ! | TAATCAGAAAAGGAAAGTGT+TGG | - | chr3_1:93335869-93335888 | Msa0388860:intron | 30.0% |
| ! | CATTTTGCAATGAAGAATCA+AGG | + | chr3_1:93335938-93335957 | None:intergenic | 30.0% |
| !! | TCATTGCAAAATGATTTGGT+TGG | - | chr3_1:93335945-93335964 | Msa0388860:intron | 30.0% |
| ! | AGAAAGCAATAGATTTGGTT+TGG | - | chr3_1:93336127-93336146 | Msa0388860:intron | 30.0% |
| !!! | GTTTGGAACTGTGTATTTTT+TGG | - | chr3_1:93336144-93336163 | Msa0388860:intron | 30.0% |
| GTTGGTGTAAAAATCAAAGA+TGG | - | chr3_1:93336175-93336194 | Msa0388860:intron | 30.0% | |
| ! | TGCTTTTCTCTCATTTTGTT+AGG | - | chr3_1:93336237-93336256 | Msa0388860:intron | 30.0% |
| ! | GCTTTTCTCTCATTTTGTTA+GGG | - | chr3_1:93336238-93336257 | Msa0388860:intron | 30.0% |
| TTAGGGAAGCTATTAGTTAA+TGG | - | chr3_1:93336255-93336274 | Msa0388860:intron | 30.0% | |
| TAGGGAAGCTATTAGTTAAT+GGG | - | chr3_1:93336256-93336275 | Msa0388860:intron | 30.0% | |
| ATTATCATGTATCAATAGGG+AGG | - | chr3_1:93336288-93336307 | Msa0388860:intron | 30.0% | |
| AACCCTAGAATTGATATGAA+AGG | + | chr3_1:93336471-93336490 | None:intergenic | 30.0% | |
| AAAATATACCATACCATGTC+CGG | - | chr3_1:93336631-93336650 | Msa0388860:intron | 30.0% | |
| TTAAATAAAAATGCCGGACA+TGG | + | chr3_1:93336647-93336666 | None:intergenic | 30.0% | |
| TTAGTCAGCAAAACATAACT+CGG | + | chr3_1:93336760-93336779 | None:intergenic | 30.0% | |
| ! | ATTTGATTTATTCAGGTGGA+TGG | - | chr3_1:93336828-93336847 | Msa0388860:intron | 30.0% |
| GAACTAAGAGCTTCAAATTT+AGG | + | chr3_1:93336951-93336970 | None:intergenic | 30.0% | |
| ATAACCAAATGCTCTATTTC+CGG | + | chr3_1:93336981-93337000 | None:intergenic | 30.0% | |
| GGAAATTAAAAATAGAACCG+GGG | + | chr3_1:93337041-93337060 | None:intergenic | 30.0% | |
| !!! | CGGTTCTATTTTTAATTTCC+TGG | - | chr3_1:93337041-93337060 | Msa0388860:intron | 30.0% |
| ACTCAATTTCTTGTGTTGTA+TGG | - | chr3_1:93337077-93337096 | Msa0388860:intron | 30.0% | |
| ! | AAATGATTTTCTCTCTCTAG+TGG | - | chr3_1:93337649-93337668 | Msa0388860:intron | 30.0% |
| ATCACAGAGAAAACTAAGTA+GGG | + | chr3_1:93337975-93337994 | None:intergenic | 30.0% | |
| AATATTTGCATGTTCAGATG+AGG | + | chr3_1:93338077-93338096 | None:intergenic | 30.0% | |
| CATCTGAACATGCAAATATT+CGG | - | chr3_1:93338077-93338096 | Msa0388860:CDS | 30.0% | |
| !!! | CGGGAATAAAGGTTTTGTTT+CGG | + | chr3_1:93332724-93332743 | None:intergenic | 35.0% |
| TGAAAAAGGTGAGGGTAAAA+CGG | + | chr3_1:93332744-93332763 | None:intergenic | 35.0% | |
| GGAAATAAGTGAAAAAGGTG+AGG | + | chr3_1:93332753-93332772 | None:intergenic | 35.0% | |
| GGATGGGAAATAAGTGAAAA+AGG | + | chr3_1:93332758-93332777 | None:intergenic | 35.0% | |
| TGAAGATGAAAGAGAAAGGA+AGG | + | chr3_1:93332887-93332906 | None:intergenic | 35.0% | |
| ! | GAGTATTGTGTAGGAGATTT+AGG | - | chr3_1:93333359-93333378 | Msa0388860:CDS | 35.0% |
| AAAATAAGCCTGATCCAAAC+GGG | + | chr3_1:93333449-93333468 | None:intergenic | 35.0% | |
| CAAAATAAGCCTGATCCAAA+CGG | + | chr3_1:93333450-93333469 | None:intergenic | 35.0% | |
| !!! | TTTGGATCAGGCTTATTTTG+AGG | - | chr3_1:93333450-93333469 | Msa0388860:intron | 35.0% |
| CACTAATATTTGTCGGTCTA+TGG | - | chr3_1:93333799-93333818 | Msa0388860:intron | 35.0% | |
| TAATTAGCTGGTATAGGTTG+GGG | - | chr3_1:93333870-93333889 | Msa0388860:intron | 35.0% | |
| TGTGTGTGTGTTTGGTTATT+TGG | - | chr3_1:93333972-93333991 | Msa0388860:intron | 35.0% | |
| AAACCACTTTACATGCAACT+CGG | + | chr3_1:93334051-93334070 | None:intergenic | 35.0% | |
| CAAGTTAGAATCAATTCAGG+AGG | - | chr3_1:93334201-93334220 | Msa0388860:intron | 35.0% | |
| !! | ATAAGTATTGGAGTAAAGGC+AGG | - | chr3_1:93334374-93334393 | Msa0388860:intron | 35.0% |
| !! | TTTTGTTTCCACTTTAGAGG+AGG | - | chr3_1:93334509-93334528 | Msa0388860:intron | 35.0% |
| ! | TTTGTTTCCACTTTAGAGGA+GGG | - | chr3_1:93334510-93334529 | Msa0388860:intron | 35.0% |
| ! | CATCACTATGCTTTATTGCT+TGG | - | chr3_1:93334537-93334556 | Msa0388860:intron | 35.0% |
| ! | CTATGCTTTATTGCTTGGAA+TGG | - | chr3_1:93334542-93334561 | Msa0388860:intron | 35.0% |
| TAATAAAGCCTTACTAGTGG+AGG | - | chr3_1:93334711-93334730 | Msa0388860:intron | 35.0% | |
| AATAAAGCCTTACTAGTGGA+GGG | - | chr3_1:93334712-93334731 | Msa0388860:intron | 35.0% | |
| TTTGGTCCATAAAGTCACTT+GGG | + | chr3_1:93334816-93334835 | None:intergenic | 35.0% | |
| ATTTGGTCCATAAAGTCACT+TGG | + | chr3_1:93334817-93334836 | None:intergenic | 35.0% | |
| GTGTCTACTCTTACTCAATT+TGG | + | chr3_1:93334834-93334853 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTCTCGATGAGAG+CGG | + | chr3_1:93335052-93335071 | None:intergenic | 35.0% |
| !! | TGCCAAATTGAGTTGATAGT+TGG | - | chr3_1:93335212-93335231 | Msa0388860:intron | 35.0% |
| !! | AGTTGGAAGCTCTGTTTTAA+TGG | - | chr3_1:93335229-93335248 | Msa0388860:intron | 35.0% |
| GAGGAAGAAATAGAAACATG+AGG | - | chr3_1:93335311-93335330 | Msa0388860:intron | 35.0% | |
| ! | TTCTCGTCTATGGTTCATTT+TGG | + | chr3_1:93335449-93335468 | None:intergenic | 35.0% |
| !! | AATTCAGGTTGTTGTTAGTC+AGG | + | chr3_1:93335527-93335546 | None:intergenic | 35.0% |
| GGAAAGGAATTGACTAATTG+AGG | + | chr3_1:93335743-93335762 | None:intergenic | 35.0% | |
| TAGTCAATTCCTTTCCGATA+AGG | - | chr3_1:93335747-93335766 | Msa0388860:intron | 35.0% | |
| AGTCAATTCCTTTCCGATAA+GGG | - | chr3_1:93335748-93335767 | Msa0388860:intron | 35.0% | |
| TAAGAAATCCCTTATCGGAA+AGG | + | chr3_1:93335759-93335778 | None:intergenic | 35.0% | |
| CTATCACTTAAAAGGTCTTC+TGG | + | chr3_1:93335799-93335818 | None:intergenic | 35.0% | |
| !! | CAGAAGACCTTTTAAGTGAT+AGG | - | chr3_1:93335797-93335816 | Msa0388860:intron | 35.0% |
| CCAGTTTCCTATCACTTAAA+AGG | + | chr3_1:93335807-93335826 | None:intergenic | 35.0% | |
| !! | CCTTTTAAGTGATAGGAAAC+TGG | - | chr3_1:93335804-93335823 | Msa0388860:intron | 35.0% |
| ! | AATGGTCTCTTTTTATGGAC+TGG | - | chr3_1:93336084-93336103 | Msa0388860:intron | 35.0% |
| AATGAGAGAAAAGCAAAGCA+TGG | + | chr3_1:93336232-93336251 | None:intergenic | 35.0% | |
| ! | ATGTATCAATAGGGAGGTTT+TGG | - | chr3_1:93336294-93336313 | Msa0388860:intron | 35.0% |
| AGTAGTGACTCTATTGTGAA+GGG | - | chr3_1:93336372-93336391 | Msa0388860:intron | 35.0% | |
| GAGAAAGGATAAACGAGAAT+AGG | + | chr3_1:93336424-93336443 | None:intergenic | 35.0% | |
| CATCTCGTAATTTGGACAAA+TGG | - | chr3_1:93336717-93336736 | Msa0388860:intron | 35.0% | |
| GGAAATCAGAATATGCAAAC+TGG | + | chr3_1:93336785-93336804 | None:intergenic | 35.0% | |
| !! | AAATTTAGGAAGCATTCTGC+GGG | + | chr3_1:93336937-93336956 | None:intergenic | 35.0% |
| !! | CAAATTTAGGAAGCATTCTG+CGG | + | chr3_1:93336938-93336957 | None:intergenic | 35.0% |
| TATGGTATGCTATATCTGCT+TGG | - | chr3_1:93337095-93337114 | Msa0388860:intron | 35.0% | |
| CATCATTTAGCCTAACCAAT+AGG | + | chr3_1:93337162-93337181 | None:intergenic | 35.0% | |
| AATTCAGACCATGATTCAGT+TGG | - | chr3_1:93337241-93337260 | Msa0388860:intron | 35.0% | |
| TGATTGAACCAACTGAATCA+TGG | + | chr3_1:93337252-93337271 | None:intergenic | 35.0% | |
| AATCAGATTGCTGTACAACT+GGG | - | chr3_1:93337363-93337382 | Msa0388860:intron | 35.0% | |
| !!! | AATGTTTTAACAACCGAACC+AGG | + | chr3_1:93337407-93337426 | None:intergenic | 35.0% |
| TATAACCGTAGCTAACTGAA+TGG | + | chr3_1:93337504-93337523 | None:intergenic | 35.0% | |
| CATCACAGAGAAAACTAAGT+AGG | + | chr3_1:93337976-93337995 | None:intergenic | 35.0% | |
| CTGTGATGTTTATCTGTTTG+AGG | - | chr3_1:93337988-93338007 | Msa0388860:intron | 35.0% | |
| TCAGCTAGATAATCATTCCA+AGG | - | chr3_1:93338260-93338279 | Msa0388860:five_prime_UTR | 35.0% | |
| AAGGTTGTTAGTTCAAACCT+TGG | + | chr3_1:93338280-93338299 | None:intergenic | 35.0% | |
| AACCTTACAATGTCGTTATG+AGG | - | chr3_1:93338294-93338313 | Msa0388860:five_prime_UTR | 35.0% | |
| ACCTTACAATGTCGTTATGA+GGG | - | chr3_1:93338295-93338314 | Msa0388860:five_prime_UTR | 35.0% | |
| !!! | AAGGTTTTGTTTCGGTGTTG+TGG | + | chr3_1:93332716-93332735 | None:intergenic | 40.0% |
| TGAGGGTAAAACGGGAATAA+AGG | + | chr3_1:93332735-93332754 | None:intergenic | 40.0% | |
| GAAAAAGGTGAGGGTAAAAC+GGG | + | chr3_1:93332743-93332762 | None:intergenic | 40.0% | |
| GAGAGAAAAAGTGGAAGAAG+CGG | + | chr3_1:93332800-93332819 | None:intergenic | 40.0% | |
| AGATGAAAGAGAAAGGAAGG+TGG | + | chr3_1:93332884-93332903 | None:intergenic | 40.0% | |
| ! | GGATTGGATTGGATGAAGAT+GGG | + | chr3_1:93332920-93332939 | None:intergenic | 40.0% |
| ! | AGGATTGGATTGGATGAAGA+TGG | + | chr3_1:93332921-93332940 | None:intergenic | 40.0% |
| GAAAAATTAGGGTTCGGAAG+AGG | + | chr3_1:93332956-93332975 | None:intergenic | 40.0% | |
| !! | CTAATTTGTTCGATACTGGG+TGG | - | chr3_1:93333145-93333164 | Msa0388860:intron | 40.0% |
| ! | CCAGACTTTACTGACCTTTT+CGG | - | chr3_1:93333182-93333201 | Msa0388860:intron | 40.0% |
| ! | AATCTAGAGTTCAGCCGAAA+AGG | + | chr3_1:93333199-93333218 | None:intergenic | 40.0% |
| GGCTGAACTCTAGATTATCA+GGG | - | chr3_1:93333203-93333222 | Msa0388860:intron | 40.0% | |
| GGTATAGATTGAGACGATGA+AGG | - | chr3_1:93333337-93333356 | Msa0388860:CDS | 40.0% | |
| !! | ACGATGAAGGAGTATTGTGT+AGG | - | chr3_1:93333350-93333369 | Msa0388860:CDS | 40.0% |
| ! | AAATAGATTTAGGGCCCGTT+TGG | - | chr3_1:93333432-93333451 | Msa0388860:intron | 40.0% |
| ! | ATTAAGGGCCCATTTGGAAT+AGG | + | chr3_1:93333606-93333625 | None:intergenic | 40.0% |
| CATGACCAGACACACATTAA+GGG | + | chr3_1:93333621-93333640 | None:intergenic | 40.0% | |
| ACATGACCAGACACACATTA+AGG | + | chr3_1:93333622-93333641 | None:intergenic | 40.0% | |
| TTAATGTGTGTCTGGTCATG+TGG | - | chr3_1:93333621-93333640 | Msa0388860:intron | 40.0% | |
| ! | AATTAGCTGGTATAGGTTGG+GGG | - | chr3_1:93333871-93333890 | Msa0388860:intron | 40.0% |
| TCTCCTGCATAATACTCCTT+CGG | + | chr3_1:93333897-93333916 | None:intergenic | 40.0% | |
| AAACCGAGTTGCATGTAAAG+TGG | - | chr3_1:93334045-93334064 | Msa0388860:CDS | 40.0% | |
| TATTGGAGTAAAGGCAGGTT+GGG | - | chr3_1:93334379-93334398 | Msa0388860:intron | 40.0% | |
| !! | GTATATCGGGTCAGTTTTGT+TGG | - | chr3_1:93334612-93334631 | Msa0388860:intron | 40.0% |
| !!! | GTCAGTTTTGTTGGAAAAGC+AGG | - | chr3_1:93334621-93334640 | Msa0388860:intron | 40.0% |
| TTTGTTGGAAAAGCAGGAGT+TGG | - | chr3_1:93334627-93334646 | Msa0388860:intron | 40.0% | |
| CTAATTACCCTCCACTAGTA+AGG | + | chr3_1:93334722-93334741 | None:intergenic | 40.0% | |
| AACATCCCCAAGTGACTTTA+TGG | - | chr3_1:93334807-93334826 | Msa0388860:intron | 40.0% | |
| TTGGTCCATAAAGTCACTTG+GGG | + | chr3_1:93334815-93334834 | None:intergenic | 40.0% | |
| TCAACTCAATTTGGCACACA+CGG | + | chr3_1:93335208-93335227 | None:intergenic | 40.0% | |
| TGAAGTGAACATCGGATAGA+AGG | - | chr3_1:93335277-93335296 | Msa0388860:intron | 40.0% | |
| GAAGTGAACATCGGATAGAA+GGG | - | chr3_1:93335278-93335297 | Msa0388860:intron | 40.0% | |
| AAGTGAACATCGGATAGAAG+GGG | - | chr3_1:93335279-93335298 | Msa0388860:intron | 40.0% | |
| ATAGAAGGGGAGATTTCTTG+AGG | - | chr3_1:93335292-93335311 | Msa0388860:intron | 40.0% | |
| AGCTTCATGCACAACCAAAT+TGG | + | chr3_1:93335346-93335365 | None:intergenic | 40.0% | |
| TTTGGTTGTGCATGAAGCTT+AGG | - | chr3_1:93335347-93335366 | Msa0388860:intron | 40.0% | |
| GCATGAAGCTTAGGTTATGA+AGG | - | chr3_1:93335356-93335375 | Msa0388860:intron | 40.0% | |
| ! | GTTGTTGTTAGTCAGGTGTA+GGG | + | chr3_1:93335520-93335539 | None:intergenic | 40.0% |
| CACTGCCAATTTATTGGGTT+AGG | - | chr3_1:93335574-93335593 | Msa0388860:intron | 40.0% | |
| TGCAGCCTAACCCAATAAAT+TGG | + | chr3_1:93335582-93335601 | None:intergenic | 40.0% | |
| TTAGCATGGAACTGATGTTG+TGG | - | chr3_1:93335648-93335667 | Msa0388860:intron | 40.0% | |
| TAGCATGGAACTGATGTTGT+GGG | - | chr3_1:93335649-93335668 | Msa0388860:intron | 40.0% | |
| CACGCAAACCTAATAGCTTA+AGG | + | chr3_1:93335702-93335721 | None:intergenic | 40.0% | |
| TGCTTTCTCTGCCTTAACAA+TGG | + | chr3_1:93336115-93336134 | None:intergenic | 40.0% | |
| GGCAGAGAAAGCAATAGATT+TGG | - | chr3_1:93336122-93336141 | Msa0388860:intron | 40.0% | |
| GAGTAGTGACTCTATTGTGA+AGG | - | chr3_1:93336371-93336390 | Msa0388860:intron | 40.0% | |
| GTAGTGACTCTATTGTGAAG+GGG | - | chr3_1:93336373-93336392 | Msa0388860:intron | 40.0% | |
| CTGAATTAGCCAACCCAAAT+TGG | + | chr3_1:93336600-93336619 | None:intergenic | 40.0% | |
| TAAAAATGCCGGACATGGTA+TGG | + | chr3_1:93336642-93336661 | None:intergenic | 40.0% | |
| TTCGTTGACGAAGTTCTATC+TGG | - | chr3_1:93336855-93336874 | Msa0388860:intron | 40.0% | |
| CTATACTCTTCTATGCTTCC+TGG | - | chr3_1:93336901-93336920 | Msa0388860:intron | 40.0% | |
| AGCTCTTAGTTCCATGTTTC+CGG | - | chr3_1:93336959-93336978 | Msa0388860:intron | 40.0% | |
| ATGCTCTATTTCCGGAAACA+TGG | + | chr3_1:93336973-93336992 | None:intergenic | 40.0% | |
| ! | GTTTCCGGAAATAGAGCATT+TGG | - | chr3_1:93336974-93336993 | Msa0388860:intron | 40.0% |
| AGCAATCATCAGCTTTACCA+AGG | - | chr3_1:93337003-93337022 | Msa0388860:intron | 40.0% | |
| !! | CAAGGTTTTTAAGCTATCCC+CGG | - | chr3_1:93337021-93337040 | Msa0388860:intron | 40.0% |
| GCAATACCTGAGTTTCCTAT+TGG | - | chr3_1:93337144-93337163 | Msa0388860:intron | 40.0% | |
| ! | ACCTGAGTTTCCTATTGGTT+AGG | - | chr3_1:93337149-93337168 | Msa0388860:intron | 40.0% |
| TCATGGTCTGAATTTCTCAC+TGG | + | chr3_1:93337235-93337254 | None:intergenic | 40.0% | |
| CAATCTGATTGAACCATGGT+TGG | + | chr3_1:93337353-93337372 | None:intergenic | 40.0% | |
| ACAGCAATCTGATTGAACCA+TGG | + | chr3_1:93337357-93337376 | None:intergenic | 40.0% | |
| CAATCAGATTGCTGTACAAC+TGG | - | chr3_1:93337362-93337381 | Msa0388860:intron | 40.0% | |
| CGAGTCGTAACTCCAAAAAA+TGG | + | chr3_1:93337749-93337768 | None:intergenic | 40.0% | |
| CTGAACCTGAAATCGTTGAT+GGG | - | chr3_1:93337918-93337937 | Msa0388860:intron | 40.0% | |
| CATGTTCAGATGAGGAATAC+AGG | + | chr3_1:93338069-93338088 | None:intergenic | 40.0% | |
| TGCTTCAAGTGATTGATGTG+AGG | - | chr3_1:93338126-93338145 | Msa0388860:CDS | 40.0% | |
| TTCAAGTGATTGATGTGAGG+AGG | - | chr3_1:93338129-93338148 | Msa0388860:CDS | 40.0% | |
| TGATTGATGTGAGGAGGATT+TGG | - | chr3_1:93338135-93338154 | Msa0388860:CDS | 40.0% | |
| ! | TCTTTGGCTTCTGTTTCTCT+GGG | - | chr3_1:93338227-93338246 | Msa0388860:five_prime_UTR | 40.0% |
| GCGGTTATGGAGAGAAAAAG+TGG | + | chr3_1:93332809-93332828 | None:intergenic | 45.0% | |
| TGAAAGAGAAAGGAAGGTGG+TGG | + | chr3_1:93332881-93332900 | None:intergenic | 45.0% | |
| CCGAAAAGGTCAGTAAAGTC+TGG | + | chr3_1:93333185-93333204 | None:intergenic | 45.0% | |
| CGGCTGAACTCTAGATTATC+AGG | - | chr3_1:93333202-93333221 | Msa0388860:intron | 45.0% | |
| ACACACATTAAGGGCCCATT+TGG | + | chr3_1:93333612-93333631 | None:intergenic | 45.0% | |
| GTATTGGAGTAAAGGCAGGT+TGG | - | chr3_1:93334378-93334397 | Msa0388860:intron | 45.0% | |
| ATTGGAGTAAAGGCAGGTTG+GGG | - | chr3_1:93334380-93334399 | Msa0388860:intron | 45.0% | |
| ! | ATGACTACCCTCCTCTAAAG+TGG | + | chr3_1:93334520-93334539 | None:intergenic | 45.0% |
| GACAGCAACTCACATGGTTA+GGG | + | chr3_1:93334755-93334774 | None:intergenic | 45.0% | |
| CAACTCAATTTGGCACACAC+GGG | + | chr3_1:93335207-93335226 | None:intergenic | 45.0% | |
| TGAGGGCAGTGTAACCAATT+TGG | - | chr3_1:93335329-93335348 | Msa0388860:intron | 45.0% | |
| ! | GTGTAGGGTGTAATGGGATA+GGG | + | chr3_1:93335505-93335524 | None:intergenic | 45.0% |
| AGTCAGGTGTAGGGTGTAAT+GGG | + | chr3_1:93335511-93335530 | None:intergenic | 45.0% | |
| TAGTCAGGTGTAGGGTGTAA+TGG | + | chr3_1:93335512-93335531 | None:intergenic | 45.0% | |
| ! | GGTTGTTGTTAGTCAGGTGT+AGG | + | chr3_1:93335521-93335540 | None:intergenic | 45.0% |
| AGGTCGCACTGCCAATTTAT+TGG | - | chr3_1:93335568-93335587 | Msa0388860:intron | 45.0% | |
| GGTCGCACTGCCAATTTATT+GGG | - | chr3_1:93335569-93335588 | Msa0388860:intron | 45.0% | |
| TGGAACTGATGTTGTGGGTT+TGG | - | chr3_1:93335654-93335673 | Msa0388860:intron | 45.0% | |
| GACTGGAGTGACCATTGTTA+AGG | - | chr3_1:93336101-93336120 | Msa0388860:intron | 45.0% | |
| !!! | AGGGAGGTTTTGGAGTTAGA+AGG | - | chr3_1:93336304-93336323 | Msa0388860:intron | 45.0% |
| TATTGTGAAGGGGAAACCCT+TGG | - | chr3_1:93336383-93336402 | Msa0388860:intron | 45.0% | |
| TATATCATACCATGCTGGCC+TGG | - | chr3_1:93336503-93336522 | Msa0388860:intron | 45.0% | |
| ! | GAAGCATTCTGCGGGAAAAT+GGG | + | chr3_1:93336929-93336948 | None:intergenic | 45.0% |
| CGGGGATAGCTTAAAAACCT+TGG | + | chr3_1:93337023-93337042 | None:intergenic | 45.0% | |
| GCCTAACCAATAGGAAACTC+AGG | + | chr3_1:93337153-93337172 | None:intergenic | 45.0% | |
| !! | CACTGGTTCAATCTTCAGTC+CGG | + | chr3_1:93337218-93337237 | None:intergenic | 45.0% |
| GAAGGTAGATGAACCAACCA+TGG | - | chr3_1:93337337-93337356 | Msa0388860:intron | 45.0% | |
| GTACAACTGGGATAGCAAAC+TGG | - | chr3_1:93337375-93337394 | Msa0388860:intron | 45.0% | |
| TTAACAACCGAACCAGGAAC+CGG | + | chr3_1:93337401-93337420 | None:intergenic | 45.0% | |
| !! | AGCTAACTGAATGGTGCCAT+AGG | + | chr3_1:93337495-93337514 | None:intergenic | 45.0% |
| TGGCACCATTCAGTTAGCTA+CGG | - | chr3_1:93337496-93337515 | Msa0388860:intron | 45.0% | |
| GATATCTCAACCTTGAGGTC+TGG | + | chr3_1:93337622-93337641 | None:intergenic | 45.0% | |
| ACCTCAAGGTTGAGATATCG+TGG | - | chr3_1:93337623-93337642 | Msa0388860:intron | 45.0% | |
| ACCACGATATCTCAACCTTG+AGG | + | chr3_1:93337627-93337646 | None:intergenic | 45.0% | |
| AGACAGACGCGTGTAAATAC+AGG | + | chr3_1:93337827-93337846 | None:intergenic | 45.0% | |
| TATTTACACGCGTCTGTCTC+AGG | - | chr3_1:93337828-93337847 | Msa0388860:intron | 45.0% | |
| TCTTCACTCATCATGCTGCT+TGG | + | chr3_1:93337888-93337907 | None:intergenic | 45.0% | |
| !! | CCATCAACGATTTCAGGTTC+AGG | + | chr3_1:93337920-93337939 | None:intergenic | 45.0% |
| CCTGAACCTGAAATCGTTGA+TGG | - | chr3_1:93337917-93337936 | Msa0388860:intron | 45.0% | |
| ACAGACCCATCAACGATTTC+AGG | + | chr3_1:93337926-93337945 | None:intergenic | 45.0% | |
| TACAGGAAACCCAGAAAGCT+CGG | + | chr3_1:93338052-93338071 | None:intergenic | 45.0% | |
| AGGAGGATTTGGACAAAGCT+AGG | - | chr3_1:93338146-93338165 | Msa0388860:CDS | 45.0% | |
| ! | AGACGAGGAATTTTCACGAG+AGG | - | chr3_1:93338177-93338196 | Msa0388860:CDS | 45.0% |
| ! | GACGAGGAATTTTCACGAGA+GGG | - | chr3_1:93338178-93338197 | Msa0388860:CDS | 45.0% |
| ! | GTCTTTGGCTTCTGTTTCTC+TGG | - | chr3_1:93338226-93338245 | Msa0388860:five_prime_UTR | 45.0% |
| GCCCTCATAACGACATTGTA+AGG | + | chr3_1:93338299-93338318 | None:intergenic | 45.0% | |
| TTCAAGCTGTAGGTGATGCT+TGG | - | chr3_1:93338351-93338370 | Msa0388860:five_prime_UTR | 45.0% | |
| !! | TTATTGAATTAATTAATTTA+TGG | - | chr3_1:93333038-93333057 | Msa0388860:CDS | 5.0% |
| GTGGCGGTGGTTGAATTTGA+CGG | + | chr3_1:93332684-93332703 | None:intergenic | 50.0% | |
| GTTGTGGTGTGTGTTTGTGG+CGG | + | chr3_1:93332700-93332719 | None:intergenic | 50.0% | |
| ! | GGTGTTGTGGTGTGTGTTTG+TGG | + | chr3_1:93332703-93332722 | None:intergenic | 50.0% |
| GAGGATGGAGAAAGCGGTTA+TGG | + | chr3_1:93332822-93332841 | None:intergenic | 50.0% | |
| GGATTGGAGGATGGAGAAAG+CGG | + | chr3_1:93332828-93332847 | None:intergenic | 50.0% | |
| !! | AGAGAAAGGAAGGTGGTGGA+GGG | + | chr3_1:93332877-93332896 | None:intergenic | 50.0% |
| ! | AAGAGAAAGGAAGGTGGTGG+AGG | + | chr3_1:93332878-93332897 | None:intergenic | 50.0% |
| CCTGAAGAGGAGGATTGGAT+TGG | + | chr3_1:93332931-93332950 | None:intergenic | 50.0% | |
| CCAATCCAATCCTCCTCTTC+AGG | - | chr3_1:93332928-93332947 | Msa0388860:CDS | 50.0% | |
| AGGAACCTGAAGAGGAGGAT+TGG | + | chr3_1:93332936-93332955 | None:intergenic | 50.0% | |
| TTCGGAAGAGGAACCTGAAG+AGG | + | chr3_1:93332944-93332963 | None:intergenic | 50.0% | |
| ! | ATTTAGGGCCCGTTTGGATC+AGG | - | chr3_1:93333438-93333457 | Msa0388860:intron | 50.0% |
| ATGGGCCCTTAATGTGTGTC+TGG | - | chr3_1:93333613-93333632 | Msa0388860:intron | 50.0% | |
| GGACAGCAACTCACATGGTT+AGG | + | chr3_1:93334756-93334775 | None:intergenic | 50.0% | |
| TGTCAGGACAGCAACTCACA+TGG | + | chr3_1:93334761-93334780 | None:intergenic | 50.0% | |
| !! | GAGGGCGTTTCACACATGTA+AGG | - | chr3_1:93334936-93334955 | Msa0388860:intron | 50.0% |
| ! | GGTGTAGGGTGTAATGGGAT+AGG | + | chr3_1:93335506-93335525 | None:intergenic | 50.0% |
| GAAAAGCAAAGCATGGCGCA+TGG | + | chr3_1:93336225-93336244 | None:intergenic | 50.0% | |
| GAGAGAAGTCTCTCCTCCAA+GGG | + | chr3_1:93336402-93336421 | None:intergenic | 50.0% | |
| ! | AGGAGCACACTACAACTCCA+AGG | + | chr3_1:93336545-93336564 | None:intergenic | 50.0% |
| TTGTAGTGTGCTCCTCCTCA+AGG | - | chr3_1:93336550-93336569 | Msa0388860:intron | 50.0% | |
| GAATTGGACCTGAGACCTTG+AGG | + | chr3_1:93336568-93336587 | None:intergenic | 50.0% | |
| ! | AAATTGGCACCGGGGAGAAT+TGG | + | chr3_1:93336584-93336603 | None:intergenic | 50.0% |
| ! | AATTCTCCCCGGTGCCAATT+TGG | - | chr3_1:93336583-93336602 | Msa0388860:intron | 50.0% |
| ! | ATTCTCCCCGGTGCCAATTT+GGG | - | chr3_1:93336584-93336603 | Msa0388860:intron | 50.0% |
| TAGCCAACCCAAATTGGCAC+CGG | + | chr3_1:93336594-93336613 | None:intergenic | 50.0% | |
| !! | GGAAGCATTCTGCGGGAAAA+TGG | + | chr3_1:93336930-93336949 | None:intergenic | 50.0% |
| AACTGGGATAGCAAACTGGC+CGG | - | chr3_1:93337379-93337398 | Msa0388860:intron | 50.0% | |
| TACTCGTGAACCAGACCTCA+AGG | - | chr3_1:93337609-93337628 | Msa0388860:intron | 50.0% | |
| CGGAGACGTGATACGATCTT+GGG | + | chr3_1:93338032-93338051 | None:intergenic | 50.0% | |
| TCGGAGACGTGATACGATCT+TGG | + | chr3_1:93338033-93338052 | None:intergenic | 50.0% | |
| TATCACGTCTCCGAGCTTTC+TGG | - | chr3_1:93338039-93338058 | Msa0388860:intron | 50.0% | |
| ATCACGTCTCCGAGCTTTCT+GGG | - | chr3_1:93338040-93338059 | Msa0388860:intron | 50.0% | |
| AGCTAGGACTATGCAAGACG+AGG | - | chr3_1:93338162-93338181 | Msa0388860:CDS | 50.0% | |
| ! | GGAATTTTCACGAGAGGGCA+AGG | - | chr3_1:93338183-93338202 | Msa0388860:CDS | 50.0% |
| TTCCCATCCCTACCCTTCCA+TGG | - | chr3_1:93332769-93332788 | Msa0388860:CDS | 55.0% | |
| AGCCATGGAAGGGTAGGGAT+GGG | + | chr3_1:93332774-93332793 | None:intergenic | 55.0% | |
| AAGCCATGGAAGGGTAGGGA+TGG | + | chr3_1:93332775-93332794 | None:intergenic | 55.0% | |
| GGAGAAGCCATGGAAGGGTA+GGG | + | chr3_1:93332779-93332798 | None:intergenic | 55.0% | |
| GAAGCGGAGAAGCCATGGAA+GGG | + | chr3_1:93332784-93332803 | None:intergenic | 55.0% | |
| AGAAGCGGAGAAGCCATGGA+AGG | + | chr3_1:93332785-93332804 | None:intergenic | 55.0% | |
| TGGAAGAAGCGGAGAAGCCA+TGG | + | chr3_1:93332789-93332808 | None:intergenic | 55.0% | |
| GGAAGAGGAACCTGAAGAGG+AGG | + | chr3_1:93332941-93332960 | None:intergenic | 55.0% | |
| ! | AGGGCCGCTTTCGTGAGAAT+CGG | - | chr3_1:93333222-93333241 | Msa0388860:intron | 55.0% |
| CCCTCCGATTCTCACGAAAG+CGG | + | chr3_1:93333229-93333248 | None:intergenic | 55.0% | |
| CCGCTTTCGTGAGAATCGGA+GGG | - | chr3_1:93333226-93333245 | Msa0388860:intron | 55.0% | |
| !! | GGGCCGAAGGAGTATTATGC+AGG | - | chr3_1:93333891-93333910 | Msa0388860:intron | 55.0% |
| TGTGAAGGGGAAACCCTTGG+AGG | - | chr3_1:93336386-93336405 | Msa0388860:intron | 55.0% | |
| GGAGAGAAGTCTCTCCTCCA+AGG | + | chr3_1:93336403-93336422 | None:intergenic | 55.0% | |
| ! | ATCATACCATGCTGGCCTGG+TGG | - | chr3_1:93336506-93336525 | Msa0388860:intron | 55.0% |
| !! | TGGCCTGGTGGTGTTGGTTT+GGG | - | chr3_1:93336518-93336537 | Msa0388860:intron | 55.0% |
| !! | GTGGTGTTGGTTTGGGACCT+TGG | - | chr3_1:93336525-93336544 | Msa0388860:intron | 55.0% |
| TTGGACCTGAGACCTTGAGG+AGG | + | chr3_1:93336565-93336584 | None:intergenic | 55.0% | |
| GTCTCAGGTCCAATTCTCCC+CGG | - | chr3_1:93336572-93336591 | Msa0388860:intron | 55.0% | |
| AGCCAACCCAAATTGGCACC+GGG | + | chr3_1:93336593-93336612 | None:intergenic | 55.0% | |
| ! | ATAGCAAACTGGCCGGTTCC+TGG | - | chr3_1:93337386-93337405 | Msa0388860:intron | 55.0% |
| ! | AAACTGGCCGGTTCCTGGTT+CGG | - | chr3_1:93337391-93337410 | Msa0388860:intron | 55.0% |
| GGCGAGACAAGCCAAGTGAT+GGG | - | chr3_1:93338098-93338117 | Msa0388860:CDS | 55.0% | |
| GAAGCACACGTCCCATCACT+TGG | + | chr3_1:93338112-93338131 | None:intergenic | 55.0% | |
| TCGGGTTTGGGCTTCGTCTT+TGG | - | chr3_1:93338211-93338230 | Msa0388860:exon | 55.0% | |
| GTGGTGTGTGTTTGTGGCGG+TGG | + | chr3_1:93332697-93332716 | None:intergenic | 60.0% | |
| CGGAGAAGCCATGGAAGGGT+AGG | + | chr3_1:93332780-93332799 | None:intergenic | 60.0% | |
| ! | GCCGCTTTCGTGAGAATCGG+AGG | - | chr3_1:93333225-93333244 | Msa0388860:intron | 60.0% |
| ! | TGGTATAGGTTGGGGGCCGA+AGG | - | chr3_1:93333878-93333897 | Msa0388860:intron | 60.0% |
| !! | CTGGCCTGGTGGTGTTGGTT+TGG | - | chr3_1:93336517-93336536 | Msa0388860:intron | 60.0% |
| GGTCCCAAACCAACACCACC+AGG | + | chr3_1:93336524-93336543 | None:intergenic | 60.0% | |
| GTGCTCCTCCTCAAGGTCTC+AGG | - | chr3_1:93336557-93336576 | Msa0388860:intron | 60.0% | |
| ! | TCCCCGGTGCCAATTTGGGT+TGG | - | chr3_1:93336588-93336607 | Msa0388860:intron | 60.0% |
| GCCAACCCAAATTGGCACCG+GGG | + | chr3_1:93336592-93336611 | None:intergenic | 60.0% | |
| TCTGCGGGAAAATGGGCACC+AGG | + | chr3_1:93336922-93336941 | None:intergenic | 60.0% | |
| CGGCGAGACAAGCCAAGTGA+TGG | - | chr3_1:93338097-93338116 | Msa0388860:CDS | 60.0% | |
| !! | ACGAGAGGGCAAGGAGTGCT+CGG | - | chr3_1:93338192-93338211 | Msa0388860:CDS | 60.0% |
| !! | GGCAAGGAGTGCTCGGGTTT+GGG | - | chr3_1:93338199-93338218 | Msa0388860:exon | 60.0% |
| !! | GGCGGAGGTGGATTGGAGGA+TGG | + | chr3_1:93332837-93332856 | None:intergenic | 65.0% |
| !! | AGGTGGTGGAGGGATGCAGG+CGG | + | chr3_1:93332867-93332886 | None:intergenic | 65.0% |
| !! | GGAAGGTGGTGGAGGGATGC+AGG | + | chr3_1:93332870-93332889 | None:intergenic | 65.0% |
| CCAACACCACCAGGCCAGCA+TGG | + | chr3_1:93336515-93336534 | None:intergenic | 65.0% | |
| ! | CCATGCTGGCCTGGTGGTGT+TGG | - | chr3_1:93336512-93336531 | Msa0388860:intron | 65.0% |
| !! | CGAGAGGGCAAGGAGTGCTC+GGG | - | chr3_1:93338193-93338212 | Msa0388860:CDS | 65.0% |
| !! | GGGCAAGGAGTGCTCGGGTT+TGG | - | chr3_1:93338198-93338217 | Msa0388860:exon | 65.0% |
| !! | CGGAGGCGGAGGTGGATTGG+AGG | + | chr3_1:93332841-93332860 | None:intergenic | 70.0% |
| AGGCGGAGGCGGAGGTGGAT+TGG | + | chr3_1:93332844-93332863 | None:intergenic | 70.0% | |
| TGGAGGGATGCAGGCGGAGG+CGG | + | chr3_1:93332861-93332880 | None:intergenic | 70.0% | |
| TGGTGGAGGGATGCAGGCGG+AGG | + | chr3_1:93332864-93332883 | None:intergenic | 70.0% | |
| GATGCAGGCGGAGGCGGAGG+CGG | + | chr3_1:93332855-93332874 | None:intergenic | 75.0% | |
| AGGGATGCAGGCGGAGGCGG+AGG | + | chr3_1:93332858-93332877 | None:intergenic | 75.0% | |
| ! | GGCGGAGGCGGAGGCGGAGG+TGG | + | chr3_1:93332849-93332868 | None:intergenic | 85.0% |
| ! | GCAGGCGGAGGCGGAGGCGG+AGG | + | chr3_1:93332852-93332871 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 93332607 | 93338394 | 93332607 | ID=Msa0388860;Name=Msa0388860 |
| chr3_1 | mRNA | 93332607 | 93338394 | 93332607 | ID=Msa0388860-mRNA-1;Parent=Msa0388860;Name=Msa0388860-mRNA-1;_AED=0.13;_eAED=0.13;_QI=181|1|1|1|0.75|0.6|5|75|296 |
| chr3_1 | exon | 93332607 | 93332644 | 93332607 | ID=Msa0388860-mRNA-1:exon:26412;Parent=Msa0388860-mRNA-1 |
| chr3_1 | exon | 93332693 | 93333151 | 93332693 | ID=Msa0388860-mRNA-1:exon:26411;Parent=Msa0388860-mRNA-1 |
| chr3_1 | exon | 93333309 | 93333433 | 93333309 | ID=Msa0388860-mRNA-1:exon:26410;Parent=Msa0388860-mRNA-1 |
| chr3_1 | exon | 93333977 | 93334158 | 93333977 | ID=Msa0388860-mRNA-1:exon:26409;Parent=Msa0388860-mRNA-1 |
| chr3_1 | exon | 93338052 | 93338394 | 93338052 | ID=Msa0388860-mRNA-1:exon:26408;Parent=Msa0388860-mRNA-1 |
| chr3_1 | five_prime_UTR | 93338214 | 93338394 | 93338214 | ID=Msa0388860-mRNA-1:five_prime_utr;Parent=Msa0388860-mRNA-1 |
| chr3_1 | CDS | 93338052 | 93338213 | 93338052 | ID=Msa0388860-mRNA-1:cds;Parent=Msa0388860-mRNA-1 |
| chr3_1 | CDS | 93333977 | 93334158 | 93333977 | ID=Msa0388860-mRNA-1:cds;Parent=Msa0388860-mRNA-1 |
| chr3_1 | CDS | 93333309 | 93333433 | 93333309 | ID=Msa0388860-mRNA-1:cds;Parent=Msa0388860-mRNA-1 |
| chr3_1 | CDS | 93332730 | 93333151 | 93332730 | ID=Msa0388860-mRNA-1:cds;Parent=Msa0388860-mRNA-1 |
| chr3_1 | three_prime_UTR | 93332693 | 93332729 | 93332693 | ID=Msa0388860-mRNA-1:three_prime_utr;Parent=Msa0388860-mRNA-1 |
| chr3_1 | three_prime_UTR | 93332607 | 93332644 | 93332607 | ID=Msa0388860-mRNA-1:three_prime_utr;Parent=Msa0388860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
