AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0396280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0396280 MtrunA17_Chr3g0082821 86.885 61 7 1 1 60 1 61 3.06e-31 103
Msa0396280 MtrunA17_Chr3g0082851 64.151 53 18 1 6 57 5 57 1.78e-18 71.6
Msa0396280 MtrunA17_Chr3g0082801 52.174 69 29 2 1 65 4 72 1.14e-16 67.0
Msa0396280 MtrunA17_Chr3g0082831 50.877 57 26 2 1 57 1 55 3.08e-13 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 48 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCATAATTCATCTATTTA+AGG 0.177671 3_2:+14174408 None:intergenic
TGTTGTAAATTCTCTTAAAT+TGG 0.217012 3_2:-14174276 Msa0396280:five_prime_UTR
ATTATAACCTTCTTCAAATA+AGG 0.229225 3_2:+14174239 None:intergenic
TACCACATACACTAAACTTA+TGG 0.261532 3_2:+14174490 None:intergenic
TTTCACCATCGTGATAATTC+TGG 0.271166 3_2:+14173514 None:intergenic
TTCTATTATTAATAATTATT+AGG 0.280220 3_2:-14174538 Msa0396280:five_prime_UTR
AAGAGTAATACTTACTTGTT+TGG 0.327595 3_2:+14174129 None:intergenic
AATATTACATAATATATATA+GGG 0.371048 3_2:-14174465 Msa0396280:five_prime_UTR
GAATATTACATAATATATAT+AGG 0.376666 3_2:-14174466 Msa0396280:five_prime_UTR
AGGAGGAGGAGACGGACGAG+GGG 0.379978 3_2:+14173568 None:intergenic
GGAGGAGGAGGAGACGGACG+AGG 0.386528 3_2:+14173566 None:intergenic
AAGTTGACAACGAATAATAA+AGG 0.395846 3_2:-14173486 Msa0396280:three_prime_UTR
ACCACATACACTAAACTTAT+GGG 0.397332 3_2:+14174491 None:intergenic
TACTTACTTGTTTGGTGATG+GGG 0.415555 3_2:+14174137 None:intergenic
TCAGTAGTACTCATAATATT+CGG 0.423798 3_2:+14173383 None:intergenic
GGAGGAGGAGACGGACGAGG+GGG 0.429097 3_2:+14173569 None:intergenic
AGAAGTGAATGAGGATTAGA+TGG 0.430273 3_2:+14174315 None:intergenic
CTTATGGGACTACGAGTACT+AGG 0.432091 3_2:+14174506 None:intergenic
AATATTCGGATACAACTCAT+AGG 0.432225 3_2:+14173397 None:intergenic
GTAAATTCTCTTAAATTGGC+AGG 0.446870 3_2:-14174272 Msa0396280:five_prime_UTR
AATACTTACTTGTTTGGTGA+TGG 0.447759 3_2:+14174135 None:intergenic
TCGTGATAATTCTGGTGCTC+TGG 0.463310 3_2:+14173522 None:intergenic
ATACATGCCTTATTTGAAGA+AGG 0.465132 3_2:-14174246 Msa0396280:exon
ATACTTACTTGTTTGGTGAT+GGG 0.468098 3_2:+14174136 None:intergenic
TAATCACGAACAGCAAAGTC+AGG 0.475555 3_2:+14174213 None:intergenic
GTTCGTGATTATCTTGTCAA+TGG 0.480879 3_2:-14174201 Msa0396280:CDS
CATCATGGACGAGGAGGAGG+AGG 0.496519 3_2:+14173554 None:intergenic
GATTATCTTGTCAATGGAAG+TGG 0.498618 3_2:-14174195 Msa0396280:CDS
TCCCATAAGTTTAGTGTATG+TGG 0.500319 3_2:-14174492 Msa0396280:five_prime_UTR
AGTTGACAACGAATAATAAA+GGG 0.503141 3_2:-14173485 Msa0396280:three_prime_UTR
CTCTGGATTCATCAGCATCA+TGG 0.516113 3_2:+14173539 None:intergenic
CATCATCAACAATATAAAGT+AGG 0.517741 3_2:+14173624 None:intergenic
CAGCATCATGGACGAGGAGG+AGG 0.520582 3_2:+14173551 None:intergenic
ACGAGTGTGAGAAGTGAATG+AGG 0.527105 3_2:+14174306 None:intergenic
AGGTGAACAAGTAAGATGTA+CGG 0.529721 3_2:+14174428 None:intergenic
GGTGAACAAGTAAGATGTAC+GGG 0.534862 3_2:+14174429 None:intergenic
GAGGAGGAGGAGACGGACGA+GGG 0.541003 3_2:+14173567 None:intergenic
GGGGAGGAGGAGACTTATAG+TGG 0.542726 3_2:+14173588 None:intergenic
ATTCATCAGCATCATGGACG+AGG 0.579537 3_2:+14173545 None:intergenic
TGGAAGTGGCAACAACAGCA+AGG 0.598443 3_2:-14174181 Msa0396280:CDS
GACTTATAGTGGTGGCCGTG+TGG 0.602172 3_2:+14173599 None:intergenic
ATAAGTTTAGTGTATGTGGT+AGG 0.609367 3_2:-14174488 Msa0396280:five_prime_UTR
GGAAGTGGCAACAACAGCAA+GGG 0.653375 3_2:-14174180 Msa0396280:CDS
CATCAGCATCATGGACGAGG+AGG 0.669707 3_2:+14173548 None:intergenic
ATTGTTGATGATGTTCCACA+CGG 0.674884 3_2:-14173614 Msa0396280:CDS
GAGGAGGAGACTTATAGTGG+TGG 0.702600 3_2:+14173591 None:intergenic
CAACAGCAAGGGTACCACCG+TGG 0.716923 3_2:-14174169 Msa0396280:CDS
GAGCACCAGAATTATCACGA+TGG 0.765204 3_2:-14173519 Msa0396280:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATATTACATAATATATAT+AGG - chr3_2:14173501-14173520 Msa0396280:three_prime_UTR 10.0%
!!! TTTTTTTTAAATTAGATTAG+TGG + chr3_2:14173591-14173610 None:intergenic 10.0%
!! GAATATTACATAATATATAT+AGG - chr3_2:14173501-14173520 Msa0396280:three_prime_UTR 10.0%
!!! TTTTTTTTAAATTAGATTAG+TGG + chr3_2:14173591-14173610 None:intergenic 10.0%
!!! ATAAAAAGTTAAATTTTCGT+TGG + chr3_2:14173385-14173404 None:intergenic 15.0%
!! ATTCATAATTCATCTATTTA+AGG + chr3_2:14173562-14173581 None:intergenic 15.0%
!!! TGATTAATAATTGATTTAGT+CGG - chr3_2:14173944-14173963 Msa0396280:intron 15.0%
!!! ATAAAAAGTTAAATTTTCGT+TGG + chr3_2:14173385-14173404 None:intergenic 15.0%
!! ATTCATAATTCATCTATTTA+AGG + chr3_2:14173562-14173581 None:intergenic 15.0%
!!! TGATTAATAATTGATTTAGT+CGG - chr3_2:14173944-14173963 Msa0396280:intron 15.0%
!! TGTTGTAAATTCTCTTAAAT+TGG - chr3_2:14173691-14173710 Msa0396280:intron 20.0%
!! ATTATAACCTTCTTCAAATA+AGG + chr3_2:14173731-14173750 None:intergenic 20.0%
!!! AATCAGATTTTACTTATTTC+TGG + chr3_2:14173929-14173948 None:intergenic 20.0%
!!! GTGGTTTTTTTTAGTAAAAA+TGG - chr3_2:14174215-14174234 Msa0396280:CDS 20.0%
!! AAGCATACATAAATTTCAAA+TGG + chr3_2:14174267-14174286 None:intergenic 20.0%
!! TGTTGTAAATTCTCTTAAAT+TGG - chr3_2:14173691-14173710 Msa0396280:intron 20.0%
!! ATTATAACCTTCTTCAAATA+AGG + chr3_2:14173731-14173750 None:intergenic 20.0%
!!! AATCAGATTTTACTTATTTC+TGG + chr3_2:14173929-14173948 None:intergenic 20.0%
!!! GTGGTTTTTTTTAGTAAAAA+TGG - chr3_2:14174215-14174234 Msa0396280:CDS 20.0%
!! AAGCATACATAAATTTCAAA+TGG + chr3_2:14174267-14174286 None:intergenic 20.0%
! AAGAGTAATACTTACTTGTT+TGG + chr3_2:14173841-14173860 None:intergenic 25.0%
!! CTTTTTGATCTAATAACTCT+CGG - chr3_2:14173858-14173877 Msa0396280:intron 25.0%
!! TTTTTGATCTAATAACTCTC+GGG - chr3_2:14173859-14173878 Msa0396280:intron 25.0%
!!! TGTCATTTTTCTACATATCT+AGG - chr3_2:14174091-14174110 Msa0396280:intron 25.0%
! CATCATCAACAATATAAAGT+AGG + chr3_2:14174346-14174365 None:intergenic 25.0%
! AAGTTGACAACGAATAATAA+AGG - chr3_2:14174481-14174500 Msa0396280:five_prime_UTR 25.0%
! AGTTGACAACGAATAATAAA+GGG - chr3_2:14174482-14174501 Msa0396280:five_prime_UTR 25.0%
! TCAGTAGTACTCATAATATT+CGG + chr3_2:14174587-14174606 None:intergenic 25.0%
! AAGAGTAATACTTACTTGTT+TGG + chr3_2:14173841-14173860 None:intergenic 25.0%
!! CTTTTTGATCTAATAACTCT+CGG - chr3_2:14173858-14173877 Msa0396280:intron 25.0%
!! TTTTTGATCTAATAACTCTC+GGG - chr3_2:14173859-14173878 Msa0396280:intron 25.0%
!!! TGTCATTTTTCTACATATCT+AGG - chr3_2:14174091-14174110 Msa0396280:intron 25.0%
! CATCATCAACAATATAAAGT+AGG + chr3_2:14174346-14174365 None:intergenic 25.0%
! AAGTTGACAACGAATAATAA+AGG - chr3_2:14174481-14174500 Msa0396280:five_prime_UTR 25.0%
! AGTTGACAACGAATAATAAA+GGG - chr3_2:14174482-14174501 Msa0396280:five_prime_UTR 25.0%
! TCAGTAGTACTCATAATATT+CGG + chr3_2:14174587-14174606 None:intergenic 25.0%
ACCACATACACTAAACTTAT+GGG + chr3_2:14173479-14173498 None:intergenic 30.0%
TACCACATACACTAAACTTA+TGG + chr3_2:14173480-14173499 None:intergenic 30.0%
ATAAGTTTAGTGTATGTGGT+AGG - chr3_2:14173479-14173498 Msa0396280:three_prime_UTR 30.0%
GTAAATTCTCTTAAATTGGC+AGG - chr3_2:14173695-14173714 Msa0396280:intron 30.0%
!! ATACATGCCTTATTTGAAGA+AGG - chr3_2:14173721-14173740 Msa0396280:intron 30.0%
! ATACTTACTTGTTTGGTGAT+GGG + chr3_2:14173834-14173853 None:intergenic 30.0%
! AATACTTACTTGTTTGGTGA+TGG + chr3_2:14173835-14173854 None:intergenic 30.0%
! GTTATTCAAGTTTCGATTTG+TGG - chr3_2:14174196-14174215 Msa0396280:CDS 30.0%
AATATTCGGATACAACTCAT+AGG + chr3_2:14174573-14174592 None:intergenic 30.0%
ACCACATACACTAAACTTAT+GGG + chr3_2:14173479-14173498 None:intergenic 30.0%
TACCACATACACTAAACTTA+TGG + chr3_2:14173480-14173499 None:intergenic 30.0%
ATAAGTTTAGTGTATGTGGT+AGG - chr3_2:14173479-14173498 Msa0396280:three_prime_UTR 30.0%
GTAAATTCTCTTAAATTGGC+AGG - chr3_2:14173695-14173714 Msa0396280:intron 30.0%
!! ATACATGCCTTATTTGAAGA+AGG - chr3_2:14173721-14173740 Msa0396280:intron 30.0%
! ATACTTACTTGTTTGGTGAT+GGG + chr3_2:14173834-14173853 None:intergenic 30.0%
! AATACTTACTTGTTTGGTGA+TGG + chr3_2:14173835-14173854 None:intergenic 30.0%
! GTTATTCAAGTTTCGATTTG+TGG - chr3_2:14174196-14174215 Msa0396280:CDS 30.0%
AATATTCGGATACAACTCAT+AGG + chr3_2:14174573-14174592 None:intergenic 30.0%
TCCCATAAGTTTAGTGTATG+TGG - chr3_2:14173475-14173494 Msa0396280:three_prime_UTR 35.0%
AGGTGAACAAGTAAGATGTA+CGG + chr3_2:14173542-14173561 None:intergenic 35.0%
AGAAGTGAATGAGGATTAGA+TGG + chr3_2:14173655-14173674 None:intergenic 35.0%
GTTCGTGATTATCTTGTCAA+TGG - chr3_2:14173766-14173785 Msa0396280:intron 35.0%
GATTATCTTGTCAATGGAAG+TGG - chr3_2:14173772-14173791 Msa0396280:intron 35.0%
!! TACTTACTTGTTTGGTGATG+GGG + chr3_2:14173833-14173852 None:intergenic 35.0%
! TCTAATAACTCTCGGGTTTT+TGG - chr3_2:14173866-14173885 Msa0396280:intron 35.0%
! CTAATAACTCTCGGGTTTTT+GGG - chr3_2:14173867-14173886 Msa0396280:intron 35.0%
!! ATTGTTGATGATGTTCCACA+CGG - chr3_2:14174353-14174372 Msa0396280:five_prime_UTR 35.0%
TTTCACCATCGTGATAATTC+TGG + chr3_2:14174456-14174475 None:intergenic 35.0%
TCCCATAAGTTTAGTGTATG+TGG - chr3_2:14173475-14173494 Msa0396280:three_prime_UTR 35.0%
AGGTGAACAAGTAAGATGTA+CGG + chr3_2:14173542-14173561 None:intergenic 35.0%
AGAAGTGAATGAGGATTAGA+TGG + chr3_2:14173655-14173674 None:intergenic 35.0%
GTTCGTGATTATCTTGTCAA+TGG - chr3_2:14173766-14173785 Msa0396280:intron 35.0%
GATTATCTTGTCAATGGAAG+TGG - chr3_2:14173772-14173791 Msa0396280:intron 35.0%
!! TACTTACTTGTTTGGTGATG+GGG + chr3_2:14173833-14173852 None:intergenic 35.0%
! TCTAATAACTCTCGGGTTTT+TGG - chr3_2:14173866-14173885 Msa0396280:intron 35.0%
! CTAATAACTCTCGGGTTTTT+GGG - chr3_2:14173867-14173886 Msa0396280:intron 35.0%
!! ATTGTTGATGATGTTCCACA+CGG - chr3_2:14174353-14174372 Msa0396280:five_prime_UTR 35.0%
TTTCACCATCGTGATAATTC+TGG + chr3_2:14174456-14174475 None:intergenic 35.0%
GGTGAACAAGTAAGATGTAC+GGG + chr3_2:14173541-14173560 None:intergenic 40.0%
TAATCACGAACAGCAAAGTC+AGG + chr3_2:14173757-14173776 None:intergenic 40.0%
AGCTAGCAAGAATCAAGAAC+TGG - chr3_2:14174174-14174193 Msa0396280:CDS 40.0%
TTGAGATTCCCAAACAGACA+TGG + chr3_2:14174314-14174333 None:intergenic 40.0%
CTGTTTGGGAATCTCAAAGA+TGG - chr3_2:14174317-14174336 Msa0396280:five_prime_UTR 40.0%
GGTGAACAAGTAAGATGTAC+GGG + chr3_2:14173541-14173560 None:intergenic 40.0%
TAATCACGAACAGCAAAGTC+AGG + chr3_2:14173757-14173776 None:intergenic 40.0%
AGCTAGCAAGAATCAAGAAC+TGG - chr3_2:14174174-14174193 Msa0396280:CDS 40.0%
TTGAGATTCCCAAACAGACA+TGG + chr3_2:14174314-14174333 None:intergenic 40.0%
CTGTTTGGGAATCTCAAAGA+TGG - chr3_2:14174317-14174336 Msa0396280:five_prime_UTR 40.0%
CTTATGGGACTACGAGTACT+AGG + chr3_2:14173464-14173483 None:intergenic 45.0%
ACGAGTGTGAGAAGTGAATG+AGG + chr3_2:14173664-14173683 None:intergenic 45.0%
! TGATGGGGCTCAATTTTCCA+CGG + chr3_2:14173818-14173837 None:intergenic 45.0%
AAACAGACATGGCAGCAACA+TGG + chr3_2:14174303-14174322 None:intergenic 45.0%
ATGTTGCTGCCATGTCTGTT+TGG - chr3_2:14174302-14174321 Msa0396280:five_prime_UTR 45.0%
TGTTGCTGCCATGTCTGTTT+GGG - chr3_2:14174303-14174322 Msa0396280:five_prime_UTR 45.0%
ATTCATCAGCATCATGGACG+AGG + chr3_2:14174425-14174444 None:intergenic 45.0%
CTCTGGATTCATCAGCATCA+TGG + chr3_2:14174431-14174450 None:intergenic 45.0%
TCGTGATAATTCTGGTGCTC+TGG + chr3_2:14174448-14174467 None:intergenic 45.0%
GAGCACCAGAATTATCACGA+TGG - chr3_2:14174448-14174467 Msa0396280:five_prime_UTR 45.0%
CTTATGGGACTACGAGTACT+AGG + chr3_2:14173464-14173483 None:intergenic 45.0%
ACGAGTGTGAGAAGTGAATG+AGG + chr3_2:14173664-14173683 None:intergenic 45.0%
! TGATGGGGCTCAATTTTCCA+CGG + chr3_2:14173818-14173837 None:intergenic 45.0%
AAACAGACATGGCAGCAACA+TGG + chr3_2:14174303-14174322 None:intergenic 45.0%
ATGTTGCTGCCATGTCTGTT+TGG - chr3_2:14174302-14174321 Msa0396280:five_prime_UTR 45.0%
TGTTGCTGCCATGTCTGTTT+GGG - chr3_2:14174303-14174322 Msa0396280:five_prime_UTR 45.0%
ATTCATCAGCATCATGGACG+AGG + chr3_2:14174425-14174444 None:intergenic 45.0%
CTCTGGATTCATCAGCATCA+TGG + chr3_2:14174431-14174450 None:intergenic 45.0%
TCGTGATAATTCTGGTGCTC+TGG + chr3_2:14174448-14174467 None:intergenic 45.0%
GAGCACCAGAATTATCACGA+TGG - chr3_2:14174448-14174467 Msa0396280:five_prime_UTR 45.0%
!! TTCTATTATTAATAATTATT+AGG - chr3_2:14173429-14173448 Msa0396280:three_prime_UTR 5.0%
!! AATATTACATAATATATATA+GGG - chr3_2:14173502-14173521 Msa0396280:three_prime_UTR 5.0%
!! TTCTATTATTAATAATTATT+AGG - chr3_2:14173429-14173448 Msa0396280:three_prime_UTR 5.0%
!! AATATTACATAATATATATA+GGG - chr3_2:14173502-14173521 Msa0396280:three_prime_UTR 5.0%
TGGAAGTGGCAACAACAGCA+AGG - chr3_2:14173786-14173805 Msa0396280:intron 50.0%
GGAAGTGGCAACAACAGCAA+GGG - chr3_2:14173787-14173806 Msa0396280:intron 50.0%
!! ACTCTCGGGTTTTTGGGAGA+AGG - chr3_2:14173873-14173892 Msa0396280:intron 50.0%
GAGGAGGAGACTTATAGTGG+TGG + chr3_2:14174379-14174398 None:intergenic 50.0%
TGGAAGTGGCAACAACAGCA+AGG - chr3_2:14173786-14173805 Msa0396280:intron 50.0%
GGAAGTGGCAACAACAGCAA+GGG - chr3_2:14173787-14173806 Msa0396280:intron 50.0%
!! ACTCTCGGGTTTTTGGGAGA+AGG - chr3_2:14173873-14173892 Msa0396280:intron 50.0%
GAGGAGGAGACTTATAGTGG+TGG + chr3_2:14174379-14174398 None:intergenic 50.0%
! TGGGGCTCAATTTTCCACGG+TGG + chr3_2:14173815-14173834 None:intergenic 55.0%
GACTTATAGTGGTGGCCGTG+TGG + chr3_2:14174371-14174390 None:intergenic 55.0%
GGGGAGGAGGAGACTTATAG+TGG + chr3_2:14174382-14174401 None:intergenic 55.0%
CATCAGCATCATGGACGAGG+AGG + chr3_2:14174422-14174441 None:intergenic 55.0%
! TGGGGCTCAATTTTCCACGG+TGG + chr3_2:14173815-14173834 None:intergenic 55.0%
GACTTATAGTGGTGGCCGTG+TGG + chr3_2:14174371-14174390 None:intergenic 55.0%
GGGGAGGAGGAGACTTATAG+TGG + chr3_2:14174382-14174401 None:intergenic 55.0%
CATCAGCATCATGGACGAGG+AGG + chr3_2:14174422-14174441 None:intergenic 55.0%
!! CAACAGCAAGGGTACCACCG+TGG - chr3_2:14173798-14173817 Msa0396280:intron 60.0%
CATCATGGACGAGGAGGAGG+AGG + chr3_2:14174416-14174435 None:intergenic 60.0%
CAGCATCATGGACGAGGAGG+AGG + chr3_2:14174419-14174438 None:intergenic 60.0%
!! CAACAGCAAGGGTACCACCG+TGG - chr3_2:14173798-14173817 Msa0396280:intron 60.0%
CATCATGGACGAGGAGGAGG+AGG + chr3_2:14174416-14174435 None:intergenic 60.0%
CAGCATCATGGACGAGGAGG+AGG + chr3_2:14174419-14174438 None:intergenic 60.0%
AGGAGGAGGAGACGGACGAG+GGG + chr3_2:14174402-14174421 None:intergenic 65.0%
GAGGAGGAGGAGACGGACGA+GGG + chr3_2:14174403-14174422 None:intergenic 65.0%
GGACGAGGAGGAGGAGGAGA+CGG + chr3_2:14174410-14174429 None:intergenic 65.0%
AGGAGGAGGAGACGGACGAG+GGG + chr3_2:14174402-14174421 None:intergenic 65.0%
GAGGAGGAGGAGACGGACGA+GGG + chr3_2:14174403-14174422 None:intergenic 65.0%
GGACGAGGAGGAGGAGGAGA+CGG + chr3_2:14174410-14174429 None:intergenic 65.0%
GGAGGAGGAGACGGACGAGG+GGG + chr3_2:14174401-14174420 None:intergenic 70.0%
GGAGGAGGAGGAGACGGACG+AGG + chr3_2:14174404-14174423 None:intergenic 70.0%
GGAGGAGGAGACGGACGAGG+GGG + chr3_2:14174401-14174420 None:intergenic 70.0%
GGAGGAGGAGGAGACGGACG+AGG + chr3_2:14174404-14174423 None:intergenic 70.0%
GGAGACGGACGAGGGGGAGG+AGG + chr3_2:14174395-14174414 None:intergenic 75.0%
GGAGGAGACGGACGAGGGGG+AGG + chr3_2:14174398-14174417 None:intergenic 75.0%
GGAGACGGACGAGGGGGAGG+AGG + chr3_2:14174395-14174414 None:intergenic 75.0%
GGAGGAGACGGACGAGGGGG+AGG + chr3_2:14174398-14174417 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 14173371 14174618 14173371 ID=Msa0396280;Name=Msa0396280
chr3_2 mRNA 14173371 14174618 14173371 ID=Msa0396280-mRNA-1;Parent=Msa0396280;Name=Msa0396280-mRNA-1;_AED=0.37;_eAED=0.37;_QI=354|1|1|1|1|1|2|185|72
chr3_2 exon 14173371 14173653 14173371 ID=Msa0396280-mRNA-1:exon:3270;Parent=Msa0396280-mRNA-1
chr3_2 exon 14174144 14174618 14174144 ID=Msa0396280-mRNA-1:exon:3269;Parent=Msa0396280-mRNA-1
chr3_2 five_prime_UTR 14174265 14174618 14174265 ID=Msa0396280-mRNA-1:five_prime_utr;Parent=Msa0396280-mRNA-1
chr3_2 CDS 14174144 14174264 14174144 ID=Msa0396280-mRNA-1:cds;Parent=Msa0396280-mRNA-1
chr3_2 CDS 14173556 14173653 14173556 ID=Msa0396280-mRNA-1:cds;Parent=Msa0396280-mRNA-1
chr3_2 three_prime_UTR 14173371 14173555 14173371 ID=Msa0396280-mRNA-1:three_prime_utr;Parent=Msa0396280-mRNA-1
Gene Sequence

>Msa0396280

ATGCCTTATTTGAAGAAGGTTATAATTAACCTGACTTTGCTGTTCGTGATTATCTTGTCAATGGAAGTGGCAACAACAGCAAGGGTACCACCGTGGAAAATTGAGCCCCATCACCAAACAAATGGACGCCTACTTTATATTGTTGATGATGTTCCACACGGCCACCACTATAAGTCTCCTCCTCCCCCTCGTCCGTCTCCTCCTCCTCCTCGTCCATGA
Protein sequence

>Msa0396280

MPYLKKVIINLTLLFVIILSMEVATTARVPPWKIEPHHQTNGRLLYIVDDVPHGHHYKSPPPPRPSPPPPRP*