AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0404560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0404560 MtrunA17_Chr3g0094681 90.649 524 32 2 1 524 1 507 0.0 951
Msa0404560 MtrunA17_Chr5g0441991 57.818 550 198 8 1 523 1 543 0.0 566
Msa0404560 MtrunA17_Chr4g0046591 49.231 65 31 1 13 75 24 88 3.10e-12 69.7
Msa0404560 MtrunA17_Chr2g0282771 50.909 55 27 0 21 75 43 97 1.05e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0404560 AT4G03250.1 38.909 550 254 21 6 523 7 506 4.61e-74 243
Msa0404560 AT1G28420.1 54.545 55 25 0 21 75 42 96 4.37e-13 72.8
Msa0404560 AT5G44180.2 49.153 59 30 0 17 75 16 74 5.05e-12 69.3
Msa0404560 AT5G44180.3 49.153 59 30 0 17 75 16 74 5.44e-12 69.3
Msa0404560 AT5G44180.1 49.153 59 30 0 17 75 16 74 5.44e-12 69.3

Find 183 sgRNAs with CRISPR-Local

Find 418 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATATCCTGTAGGATTTA+AGG 0.153067 3_2:-36713334 None:intergenic
TTAATATTGTTTGGTTAAAT+AGG 0.197207 3_2:-36716597 None:intergenic
CAACTTAGTTTGTTCCAATT+TGG 0.216976 3_2:+36716926 Msa0404560:three_prime_UTR
CAAACTGCAAATCCAGTTAA+TGG 0.227706 3_2:+36713501 Msa0404560:CDS
GCATAATTCTCGAATTTCTA+TGG 0.231441 3_2:+36715240 Msa0404560:CDS
TAAATTTGACCCTTTGATTA+AGG 0.233383 3_2:-36711184 None:intergenic
CACCTTCCATTTGTAAATCT+TGG 0.234276 3_2:-36714844 None:intergenic
ATGCAGCTGCTTGTGGTAAT+AGG 0.242596 3_2:+36716840 Msa0404560:three_prime_UTR
GTTGCAAACACATTCAAAAT+AGG 0.254802 3_2:-36716250 None:intergenic
TGGAATTGAAGCCCGGTTAT+TGG 0.266258 3_2:-36716675 None:intergenic
TGAATGTGTTTGCAACTAAA+TGG 0.272202 3_2:+36716257 Msa0404560:three_prime_UTR
TCATACAGGAGAGGCGGTTT+TGG 0.283158 3_2:-36716767 None:intergenic
CCTAAAACTTGGTGAAAATA+AGG 0.295780 3_2:+36711297 Msa0404560:five_prime_UTR
AGCTGATTGTTGCATGGTTT+TGG 0.297545 3_2:+36716388 Msa0404560:three_prime_UTR
CATGCATGATTCTGATTTCC+AGG 0.310702 3_2:+36714880 Msa0404560:CDS
TTCCAAGCAACCAACCAAAT+TGG 0.311640 3_2:-36716940 None:intergenic
TTTAGACACGATTGCCTGTT+TGG 0.320667 3_2:-36714290 None:intergenic
ACCATGACTCTCAACCTCTT+TGG 0.325414 3_2:-36713118 None:intergenic
CAAGACCGTGTCAGTGGACT+AGG 0.327708 3_2:+36713045 Msa0404560:CDS
ACACTCAAAACCGCTGCAAT+AGG 0.335544 3_2:-36716284 None:intergenic
GGCAAATGATTGGTATGAAT+TGG 0.347033 3_2:-36714953 None:intergenic
ATAAAGAAATAGTAACAAAA+TGG 0.348700 3_2:-36716571 None:intergenic
TTAGACACGATTGCCTGTTT+GGG 0.351618 3_2:-36714289 None:intergenic
AGCCCGGTTATTGGTGGTCT+TGG 0.352113 3_2:-36716666 None:intergenic
TAAAACCCCTGCACAGCTTA+TGG 0.357510 3_2:+36712595 Msa0404560:CDS
ATAGTAAACCTACCATTAAC+TGG 0.358625 3_2:-36713513 None:intergenic
TTTGGTGTTACGTGTCTATA+AGG 0.369262 3_2:-36713297 None:intergenic
TTATATCCTGTAGGATTTAA+GGG 0.371721 3_2:-36713333 None:intergenic
ACCTTCCATTTGTAAATCTT+GGG 0.373107 3_2:-36714843 None:intergenic
CTGTTTGGGGCAGAGTCATC+TGG 0.373119 3_2:-36714275 None:intergenic
CTTGGTTCAATCTCAGCAAC+AGG 0.374473 3_2:-36715875 None:intergenic
CCCTGCACAGCTTATGGCCT+TGG 0.376056 3_2:+36712601 Msa0404560:CDS
CCATGACTCTCAACCTCTTT+GGG 0.381347 3_2:-36713117 None:intergenic
CACTCAACCCATGGAGGAAC+TGG 0.387048 3_2:-36716060 None:intergenic
GGGTGGTTTCTCTAAGTCAT+GGG 0.394871 3_2:+36716106 Msa0404560:three_prime_UTR
TGCAGCTGCTTGTGGTAATA+GGG 0.395943 3_2:+36716841 Msa0404560:three_prime_UTR
GAATTATGCATTGTATTTGA+AGG 0.397343 3_2:-36715226 None:intergenic
AGGACAGGATCCATATGATA+TGG 0.397603 3_2:+36713272 Msa0404560:CDS
ATGCATTGTATTTGAAGGTT+CGG 0.397770 3_2:-36715221 None:intergenic
TGTCCAAGACCACCAATAAC+CGG 0.401381 3_2:+36716663 Msa0404560:three_prime_UTR
AGATCATGTAGTTCGGAATC+AGG 0.401639 3_2:-36716718 None:intergenic
ACCGTTGAGATCGAGTTGTT+TGG 0.403519 3_2:+36716322 Msa0404560:three_prime_UTR
CTCGTGATAGCGATGATCAC+TGG 0.417810 3_2:-36715107 None:intergenic
GGGGAAGCACCTTCTTATAA+TGG 0.419829 3_2:+36715016 Msa0404560:CDS
CACTCAAAACCGCTGCAATA+GGG 0.422460 3_2:-36716283 None:intergenic
CTATAAGGCTCCATATCATA+TGG 0.423768 3_2:-36713282 None:intergenic
GATTTGAACGTAGACTCAAC+TGG 0.424081 3_2:+36714995 Msa0404560:CDS
TGACATGTATATACTGCATT+TGG 0.427579 3_2:-36716866 None:intergenic
GCATGGTGAGTACAGGTGTT+TGG 0.431803 3_2:+36713092 Msa0404560:CDS
TCCAAGGCCATAAGCTGTGC+AGG 0.439233 3_2:-36712602 None:intergenic
GTGGCTCCCATTGTGTGAAT+AGG 0.441276 3_2:-36716167 None:intergenic
TTGTTCTTTGTTGAATAAGC+TGG 0.441613 3_2:-36714916 None:intergenic
TAAATTCCTATTCACACAAT+GGG 0.441635 3_2:+36716161 Msa0404560:three_prime_UTR
TTGCAGGAAGAAAAGTTCAA+TGG 0.441671 3_2:+36715401 Msa0404560:intron
GGAACAATGAAGAAGGTAGA+TGG 0.443357 3_2:-36716477 None:intergenic
TGCAGGAAGAAAAGTTCAAT+GGG 0.443717 3_2:+36715402 Msa0404560:intron
AAAGGTGAAGTATGTGCTAA+TGG 0.444429 3_2:+36712994 Msa0404560:CDS
CAGATGACTCTGCCCCAAAC+AGG 0.449852 3_2:+36714276 Msa0404560:CDS
GTTCTTGCCAGGCAAATGAT+TGG 0.454021 3_2:-36714963 None:intergenic
TGGGTGGTTTCTCTAAGTCA+TGG 0.456030 3_2:+36716105 Msa0404560:three_prime_UTR
TATCATATGGATCCTGTCCT+TGG 0.459663 3_2:-36713269 None:intergenic
TCAACTTTCATTTCCTCTGT+GGG 0.466436 3_2:-36712889 None:intergenic
AAAGAGAGGGGTTTGCATCA+TGG 0.471242 3_2:-36714244 None:intergenic
ACAAATGGAAGGTGGTGACT+TGG 0.472755 3_2:+36714853 Msa0404560:CDS
TATAGACACGTAACACCAAA+TGG 0.476346 3_2:+36713300 Msa0404560:CDS
TCAAAATCTACATTAAGTAG+TGG 0.476441 3_2:-36713450 None:intergenic
TGAAGAAGGTAGATGGATGG+AGG 0.483571 3_2:-36716470 None:intergenic
AAGGGTGGAAGAGCTCCATT+TGG 0.483958 3_2:-36713315 None:intergenic
AACCGCCTCTCCTGTATGAC+GGG 0.484717 3_2:+36716771 Msa0404560:three_prime_UTR
GCACCTTTACCCCTAAAACT+TGG 0.487533 3_2:+36711286 Msa0404560:five_prime_UTR
ACTGCTGTTAAGAATCGGTT+AGG 0.488521 3_2:+36713405 Msa0404560:CDS
CTTCCACCCTTAAATCCTAC+AGG 0.493600 3_2:+36713327 Msa0404560:CDS
CTACTACATGGCTACAATAA+CGG 0.493623 3_2:+36715160 Msa0404560:CDS
ATTTCTCATGCAGCTGCTTG+TGG 0.496344 3_2:+36716833 Msa0404560:three_prime_UTR
ATGACTGATCTTAAAATTGT+GGG 0.496477 3_2:+36716086 Msa0404560:three_prime_UTR
GGCACTAGAAATCATAGAAT+AGG 0.497964 3_2:+36715037 Msa0404560:CDS
CTATAACTGCTGTTAAGAAT+CGG 0.502559 3_2:+36713400 Msa0404560:CDS
ATTCATACCAATCATTTGCC+TGG 0.506282 3_2:+36714956 Msa0404560:CDS
GGATCTGACTTCATAATCGC+CGG 0.509626 3_2:-36715136 None:intergenic
TACAGAAAATGATAGTGAAA+CGG 0.510234 3_2:+36713197 Msa0404560:CDS
TTTCTAGTGCCATTATAAGA+AGG 0.512283 3_2:-36715025 None:intergenic
CAAATGGAAGGTGGTGACTT+GGG 0.512635 3_2:+36714854 Msa0404560:CDS
TCCACAGGAAAGTTCTTGCC+AGG 0.512885 3_2:-36714974 None:intergenic
AAGGAAAATGCAGAAATATG+TGG 0.515172 3_2:-36711212 None:intergenic
CCTACAGGATATAAACCATC+AGG 0.515416 3_2:+36713342 Msa0404560:CDS
TTCAACTTTCATTTCCTCTG+TGG 0.515681 3_2:-36712890 None:intergenic
CTATGGATTCTGAAGAAAGA+GGG 0.519430 3_2:+36715257 Msa0404560:CDS
GCTGGCGGGATTTCTTATCC+TGG 0.525159 3_2:-36714898 None:intergenic
GAAGAAGGTAGATGGATGGA+GGG 0.525397 3_2:-36716469 None:intergenic
GCCGCTCAGATCATGTAGTT+CGG 0.526113 3_2:-36716725 None:intergenic
TGATGAAACCAGTTCCTCCA+TGG 0.527407 3_2:+36716052 Msa0404560:CDS
AAAGGTGCAAACTTTATCAC+TGG 0.528541 3_2:-36711271 None:intergenic
GCACTAAGCATGGTGAGTAC+AGG 0.530782 3_2:+36713085 Msa0404560:CDS
GATGACTGATCTTAAAATTG+TGG 0.534155 3_2:+36716085 Msa0404560:three_prime_UTR
TGCAAAGATGAGCTACTCTC+AGG 0.534507 3_2:-36713231 None:intergenic
TTGACAGAAAAGCAAATCTC+GGG 0.535331 3_2:+36712931 Msa0404560:CDS
GTTGACAGAAAAGCAAATCT+CGG 0.536727 3_2:+36712930 Msa0404560:CDS
GTTTGAAATTCAAATGCCCC+TGG 0.538643 3_2:-36713483 None:intergenic
AAAGAATATCATGAGTCAGA+TGG 0.539635 3_2:+36715440 Msa0404560:CDS
AGGAAAATGCAGAAATATGT+GGG 0.540357 3_2:-36711211 None:intergenic
CAACACATGGAATTGAAGCC+CGG 0.541580 3_2:-36716682 None:intergenic
TCTTCTAATTGCAACTCCAT+CGG 0.542711 3_2:-36712533 None:intergenic
TCCCAAGATTTACAAATGGA+AGG 0.543378 3_2:+36714842 Msa0404560:CDS
TGTTAACACAATACCTTCCA+TGG 0.550566 3_2:-36711343 None:intergenic
AATTGAAGCCCGGTTATTGG+TGG 0.550959 3_2:-36716672 None:intergenic
CAAAATCTACATTAAGTAGT+GGG 0.551836 3_2:-36713449 None:intergenic
GAGTCTACGTTCAAATCCAC+AGG 0.553549 3_2:-36714989 None:intergenic
TCTGGAGAATTTGAAAGAGA+GGG 0.555797 3_2:-36714257 None:intergenic
AAGTTCCCAAGATTTACAAA+TGG 0.561294 3_2:+36714838 Msa0404560:CDS
GTTTGAAGGAACAATGAAGA+AGG 0.561722 3_2:-36716484 None:intergenic
CCAAGGCCATAAGCTGTGCA+GGG 0.562140 3_2:-36712601 None:intergenic
TCTATGGATTCTGAAGAAAG+AGG 0.562753 3_2:+36715256 Msa0404560:CDS
ACGGTATTATCTCCAAGGAC+AGG 0.562785 3_2:+36713257 Msa0404560:CDS
TTCTTTGTTGAATAAGCTGG+CGG 0.564732 3_2:-36714913 None:intergenic
AAGAAAGAGGGCTTTCTGAA+AGG 0.565873 3_2:+36715269 Msa0404560:CDS
GTAATGTGAAGAATGTACTA+AGG 0.567502 3_2:+36715182 Msa0404560:CDS
AAGAGGGCTTTCTGAAAGGA+TGG 0.567622 3_2:+36715273 Msa0404560:CDS
CAATGAAGAAGGTAGATGGA+TGG 0.568212 3_2:-36716473 None:intergenic
CTGGAGAATTTGAAAGAGAG+GGG 0.568291 3_2:-36714256 None:intergenic
CAACTTTCATTTCCTCTGTG+GGG 0.569792 3_2:-36712888 None:intergenic
TATATCTGTGTGTGATGACA+TGG 0.569995 3_2:-36716541 None:intergenic
ATCTGGAGAATTTGAAAGAG+AGG 0.570870 3_2:-36714258 None:intergenic
CTCACCACAGTTTCTCTCAA+AGG 0.571956 3_2:-36715473 None:intergenic
GTCCAAGACCACCAATAACC+GGG 0.574528 3_2:+36716664 Msa0404560:three_prime_UTR
GCCTGGCAAGAACTTTCCTG+TGG 0.575905 3_2:+36714973 Msa0404560:CDS
TCGTGATAGCGATGATCACT+GGG 0.576108 3_2:-36715106 None:intergenic
CCCAAAGAGGTTGAGAGTCA+TGG 0.576918 3_2:+36713117 Msa0404560:CDS
AGTCATCAGCACTCAACCCA+TGG 0.576920 3_2:-36716069 None:intergenic
CAAGAACGGTATTATCTCCA+AGG 0.580779 3_2:+36713252 Msa0404560:CDS
AAACCGCCTCTCCTGTATGA+CGG 0.582921 3_2:+36716770 Msa0404560:three_prime_UTR
CTTAATGTAGTCGCAACACA+TGG 0.584200 3_2:-36716695 None:intergenic
AGAAGACAATACAACCTCTA+CGG 0.585953 3_2:+36712550 Msa0404560:CDS
TTAAATTCCTATTCACACAA+TGG 0.587437 3_2:+36716160 Msa0404560:three_prime_UTR
CTGTTAAGAATCGGTTAGGA+AGG 0.588262 3_2:+36713409 Msa0404560:CDS
GATGAAACCAGTTCCTCCAT+GGG 0.588465 3_2:+36716053 Msa0404560:CDS
CAGGTGTTTGGATCCCAAAG+AGG 0.589068 3_2:+36713104 Msa0404560:CDS
GTAGCTCATCTTTGCAAGAA+CGG 0.592344 3_2:+36713238 Msa0404560:CDS
ATTTGAACGTAGACTCAACT+GGG 0.593202 3_2:+36714996 Msa0404560:CDS
AAAGATAAGAGACTGATGAA+AGG 0.596779 3_2:+36712976 Msa0404560:CDS
AATTGAAGCTGATTGTTGCA+TGG 0.600057 3_2:+36716382 Msa0404560:three_prime_UTR
TAGACACGATTGCCTGTTTG+GGG 0.604461 3_2:-36714288 None:intergenic
CATAGAATAGGCACTAAGCA+TGG 0.605322 3_2:+36715049 Msa0404560:CDS
AAGTCAGATCCACTACTACA+TGG 0.608206 3_2:+36715148 Msa0404560:CDS
CCTGATGGTTTATATCCTGT+AGG 0.609287 3_2:-36713342 None:intergenic
GGTGGTTTCTCTAAGTCATG+GGG 0.609728 3_2:+36716107 Msa0404560:three_prime_UTR
TGGAGGGAGTGAAGAAAATG+TGG 0.610492 3_2:-36716453 None:intergenic
GATCTGACTTCATAATCGCC+GGG 0.612811 3_2:-36715135 None:intergenic
CAGAAAAGCAAATCTCGGGA+TGG 0.614233 3_2:+36712935 Msa0404560:CDS
CTGGAAATCAGAATCATGCA+TGG 0.616257 3_2:-36714879 None:intergenic
CAAGATTTACAAATGGAAGG+TGG 0.616333 3_2:+36714845 Msa0404560:CDS
TTCCCGTCATACAGGAGAGG+CGG 0.620401 3_2:-36716773 None:intergenic
ACCCATTTGAACAAAACCAA+AGG 0.621979 3_2:-36711231 None:intergenic
TTATTGTAGCCATGTAGTAG+TGG 0.623018 3_2:-36715157 None:intergenic
GCTTTCTGAAAGGATGGCAA+AGG 0.632256 3_2:+36715279 Msa0404560:CDS
TCATGTGGAAGCACTAAGCA+TGG 0.632594 3_2:+36713075 Msa0404560:CDS
CAAGGCCATAAGCTGTGCAG+GGG 0.634076 3_2:-36712600 None:intergenic
TTTGGGTGTCGAGGCAACAG+CGG 0.639243 3_2:-36716749 None:intergenic
GAAGAAAGAGATAGAGCATG+CGG 0.640968 3_2:+36713377 Msa0404560:CDS
AAATGGAAACCCTATTGCAG+CGG 0.642090 3_2:+36716274 Msa0404560:three_prime_UTR
TCATCCTCACTAAAGCTAGA+CGG 0.642459 3_2:-36716023 None:intergenic
AAGACCGTGTCAGTGGACTA+GGG 0.645299 3_2:+36713046 Msa0404560:CDS
GTTGTTCAAGACCGTGTCAG+TGG 0.646069 3_2:+36713039 Msa0404560:CDS
TCTTTGTTGAATAAGCTGGC+GGG 0.646615 3_2:-36714912 None:intergenic
TCCAAACAACTCGATCTCAA+CGG 0.648231 3_2:-36716323 None:intergenic
ACTGATCTTAAAATTGTGGG+TGG 0.650124 3_2:+36716089 Msa0404560:three_prime_UTR
GTGAAGAATGTACTAAGGTG+TGG 0.652203 3_2:+36715187 Msa0404560:CDS
GGACGACAAGATCGATCAAG+TGG 0.652409 3_2:+36713015 Msa0404560:CDS
TGAAATTCAAATGCCCCTGG+AGG 0.656858 3_2:-36713480 None:intergenic
GTTTGGAATCAAGCTTACTG+TGG 0.659751 3_2:+36716339 Msa0404560:three_prime_UTR
CTTGCCCTAGTCCACTGACA+CGG 0.661193 3_2:-36713050 None:intergenic
GGACTAGGGCAAGATTCATG+TGG 0.663027 3_2:+36713060 Msa0404560:CDS
TCGCTATCACGAGAATAACC+CGG 0.675003 3_2:+36715117 Msa0404560:CDS
ATGATAATGTAGATCTGCTG+TGG 0.688279 3_2:+36715995 Msa0404560:intron
TATCCTGTAGGATTTAAGGG+TGG 0.688920 3_2:-36713330 None:intergenic
GGAAAATGCAGAAATATGTG+GGG 0.697050 3_2:-36711210 None:intergenic
CATCAGCACTCAACCCATGG+AGG 0.702201 3_2:-36716066 None:intergenic
ATTGCCTTTGAGAGAAACTG+TGG 0.709138 3_2:+36715469 Msa0404560:CDS
GTTGCCGTCTAGCTTTAGTG+AGG 0.710155 3_2:+36716019 Msa0404560:CDS
TTGAACCAAGGAAAACTCAG+AGG 0.722923 3_2:+36715888 Msa0404560:CDS
CTGTTGCTGAGATTGAACCA+AGG 0.733986 3_2:+36715876 Msa0404560:CDS
TCCGAACTACATGATCTGAG+CGG 0.745600 3_2:+36716724 Msa0404560:three_prime_UTR
TTTGAACGTAGACTCAACTG+GGG 0.792830 3_2:+36714997 Msa0404560:CDS
AGAGCACAAATACCCCACAG+AGG 0.803915 3_2:+36712876 Msa0404560:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAACATTACCTAATAAA+AGG - chr3_2:36711645-36711664 None:intergenic 15.0%
!!! TGAGCTTTTTTTTTTTTTTT+TGG + chr3_2:36711666-36711685 Msa0404560:intron 15.0%
!!! TAACTTATGTAAAGTATTTT+TGG + chr3_2:36712081-36712100 Msa0404560:intron 15.0%
!!! TTTTATAGTATAGTAAAATG+CGG + chr3_2:36712693-36712712 Msa0404560:intron 15.0%
!!! ATTTATGTTTTGATTATTTG+AGG + chr3_2:36713685-36713704 Msa0404560:intron 15.0%
!!! TTTGAAATTTTCACTATTAA+TGG + chr3_2:36713741-36713760 Msa0404560:intron 15.0%
!! AAACAAAACAATATTTCTTT+GGG - chr3_2:36713914-36713933 None:intergenic 15.0%
!! AATAAGATGATGAAAAATAA+AGG - chr3_2:36714347-36714366 None:intergenic 15.0%
!!! TTGATAATTTGATTTTCTAT+CGG + chr3_2:36715530-36715549 Msa0404560:intron 15.0%
!! ATAAAGAAATAGTAACAAAA+TGG - chr3_2:36716574-36716593 None:intergenic 15.0%
!! TTAATATTGTTTGGTTAAAT+AGG - chr3_2:36716600-36716619 None:intergenic 15.0%
!!! TAATATTCTTTTTCAGTGAT+AGG + chr3_2:36711069-36711088 Msa0404560:five_prime_UTR 20.0%
!! GATTAAGGTTAGAAAAATTA+GGG - chr3_2:36711172-36711191 None:intergenic 20.0%
!! TGATTAAGGTTAGAAAAATT+AGG - chr3_2:36711173-36711192 None:intergenic 20.0%
!!! ATTTTTCTAACCTTAATCAA+AGG + chr3_2:36711174-36711193 Msa0404560:five_prime_UTR 20.0%
!!! TTTTTCTAACCTTAATCAAA+GGG + chr3_2:36711175-36711194 Msa0404560:five_prime_UTR 20.0%
!! GAAAAAACAAGTTCAAATTA+GGG - chr3_2:36711591-36711610 None:intergenic 20.0%
!! AGAAAAAACAAGTTCAAATT+AGG - chr3_2:36711592-36711611 None:intergenic 20.0%
!!! CTTGTTTTTTCTTTTGTTAT+TGG + chr3_2:36711600-36711619 Msa0404560:intron 20.0%
!!! CATACACATTTTTTCTTTTT+TGG - chr3_2:36712058-36712077 None:intergenic 20.0%
!! TCAACAACTTAAGATTATTA+GGG + chr3_2:36712270-36712289 Msa0404560:intron 20.0%
!! ATAATCAAAACATAAATGCA+AGG - chr3_2:36713682-36713701 None:intergenic 20.0%
!! AACATGTTAAAAATTCATTC+AGG - chr3_2:36713712-36713731 None:intergenic 20.0%
!! AATAGTGAAAATTTCAAACA+AGG - chr3_2:36713739-36713758 None:intergenic 20.0%
!! GAAACAAAACAATATTTCTT+TGG - chr3_2:36713915-36713934 None:intergenic 20.0%
!! TTCTCAAAACAAATGAATTA+TGG + chr3_2:36713944-36713963 Msa0404560:intron 20.0%
!! ATGATACATTAATCATAAGT+AGG + chr3_2:36714376-36714395 Msa0404560:intron 20.0%
!! GTTAATGTTAAGAAAAGATA+AGG - chr3_2:36715795-36715814 None:intergenic 20.0%
!!! TTTTCTTAACATTAACACTT+AGG + chr3_2:36715799-36715818 Msa0404560:intron 20.0%
!!! CTTTTAGAATCTAGAATTTT+TGG + chr3_2:36716798-36716817 Msa0404560:three_prime_UTR 20.0%
!!! ATATACATGTCATTATTTTG+TGG + chr3_2:36716877-36716896 Msa0404560:three_prime_UTR 20.0%
!! TTTTTATCTTTGTGCATGAA+TGG - chr3_2:36711132-36711151 None:intergenic 25.0%
! GAAAAATTAGGGTGAAAAAA+GGG - chr3_2:36711161-36711180 None:intergenic 25.0%
! AGAAAAATTAGGGTGAAAAA+AGG - chr3_2:36711162-36711181 None:intergenic 25.0%
! TAAATTTGACCCTTTGATTA+AGG - chr3_2:36711187-36711206 None:intergenic 25.0%
!!! TTATTTTCACCAAGTTTTAG+GGG - chr3_2:36711298-36711317 None:intergenic 25.0%
!!! CTTATTTTCACCAAGTTTTA+GGG - chr3_2:36711299-36711318 None:intergenic 25.0%
!!! TAATGGTGGATTATTTTTCA+GGG + chr3_2:36711451-36711470 Msa0404560:intron 25.0%
!! TTCTTTCAAATCACATGTTT+TGG + chr3_2:36711717-36711736 Msa0404560:intron 25.0%
!!! AATCACATGTTTTGGTTTTA+TGG + chr3_2:36711725-36711744 Msa0404560:intron 25.0%
! ATGTATATGAGATAAATCCA+AGG + chr3_2:36711773-36711792 Msa0404560:intron 25.0%
! TGTATATGAGATAAATCCAA+GGG + chr3_2:36711774-36711793 Msa0404560:intron 25.0%
!!! TGTAAAGTATTTTTGGTGAA+TGG + chr3_2:36712088-36712107 Msa0404560:intron 25.0%
! AAAAGAATTTCATTCTTAGC+TGG - chr3_2:36712215-36712234 None:intergenic 25.0%
! CTCAACAACTTAAGATTATT+AGG + chr3_2:36712269-36712288 Msa0404560:intron 25.0%
! CAACAACTTAAGATTATTAG+GGG + chr3_2:36712271-36712290 Msa0404560:intron 25.0%
! TACTGAAAAGAAATTGTGAA+AGG - chr3_2:36712338-36712357 None:intergenic 25.0%
! ATTCGAATCAGTTTAATGTT+GGG - chr3_2:36712438-36712457 None:intergenic 25.0%
!! GCCTTGGAAAATTTTTATAA+CGG + chr3_2:36712617-36712636 Msa0404560:CDS 25.0%
!! ACCGTTATAAAAATTTTCCA+AGG - chr3_2:36712621-36712640 None:intergenic 25.0%
!!! CTTTTCATGGTTTTAAATAG+TGG + chr3_2:36712651-36712670 Msa0404560:intron 25.0%
!!! AGAAGCATATTTTTAAACTG+CGG - chr3_2:36712780-36712799 None:intergenic 25.0%
!! AATATGCTTCTTTTGTCATA+TGG + chr3_2:36712789-36712808 Msa0404560:intron 25.0%
!! TACAGAAAATGATAGTGAAA+CGG + chr3_2:36713197-36713216 Msa0404560:CDS 25.0%
! TTATATCCTGTAGGATTTAA+GGG - chr3_2:36713336-36713355 None:intergenic 25.0%
! TTTATATCCTGTAGGATTTA+AGG - chr3_2:36713337-36713356 None:intergenic 25.0%
!!! TTCACTTTTAAATATCCTGA+TGG - chr3_2:36713360-36713379 None:intergenic 25.0%
! CAAAATCTACATTAAGTAGT+GGG - chr3_2:36713452-36713471 None:intergenic 25.0%
! TCAAAATCTACATTAAGTAG+TGG - chr3_2:36713453-36713472 None:intergenic 25.0%
! TAAAATTACATATGTTCGAG+AGG + chr3_2:36713768-36713787 Msa0404560:intron 25.0%
!! ATTTTGTCATAACTTATGTG+AGG + chr3_2:36714092-36714111 Msa0404560:intron 25.0%
!! TTTTGTCATAACTTATGTGA+GGG + chr3_2:36714093-36714112 Msa0404560:intron 25.0%
!!! AATCACTTTTGAATCCAAAT+TGG + chr3_2:36714624-36714643 Msa0404560:intron 25.0%
!!! ATCACTTTTGAATCCAAATT+GGG + chr3_2:36714625-36714644 Msa0404560:intron 25.0%
!! TCAACAAAGAACAAATTTTC+AGG + chr3_2:36714925-36714944 Msa0404560:CDS 25.0%
! GAATTATGCATTGTATTTGA+AGG - chr3_2:36715229-36715248 None:intergenic 25.0%
! GTAGAATTATTGTCAAATAG+CGG - chr3_2:36715622-36715641 None:intergenic 25.0%
! TTGACAATAATTCTACCAAT+TGG + chr3_2:36715626-36715645 Msa0404560:intron 25.0%
! AATTGAAATTCATGCTGTTA+AGG - chr3_2:36715975-36715994 None:intergenic 25.0%
! ATGACTGATCTTAAAATTGT+GGG + chr3_2:36716086-36716105 Msa0404560:three_prime_UTR 25.0%
! TTAAATTCCTATTCACACAA+TGG + chr3_2:36716160-36716179 Msa0404560:three_prime_UTR 25.0%
! TAAATTCCTATTCACACAAT+GGG + chr3_2:36716161-36716180 Msa0404560:three_prime_UTR 25.0%
! TAGTTTAGTAGATGAAAAAG+AGG - chr3_2:36716512-36716531 None:intergenic 25.0%
! TTGCTAGAATCAAATTTTGC+AGG - chr3_2:36711106-36711125 None:intergenic 30.0%
AGGAAAATGCAGAAATATGT+GGG - chr3_2:36711214-36711233 None:intergenic 30.0%
AAGGAAAATGCAGAAATATG+TGG - chr3_2:36711215-36711234 None:intergenic 30.0%
!! CATATTTCTGCATTTTCCTT+TGG + chr3_2:36711215-36711234 Msa0404560:five_prime_UTR 30.0%
!!! TTCCTTTGGTTTTGTTCAAA+TGG + chr3_2:36711229-36711248 Msa0404560:five_prime_UTR 30.0%
!!! TCCTTTGGTTTTGTTCAAAT+GGG + chr3_2:36711230-36711249 Msa0404560:five_prime_UTR 30.0%
!!! CCTTATTTTCACCAAGTTTT+AGG - chr3_2:36711300-36711319 None:intergenic 30.0%
! CCTAAAACTTGGTGAAAATA+AGG + chr3_2:36711297-36711316 Msa0404560:five_prime_UTR 30.0%
! TTCATGCATTGTTTGCATTT+TGG + chr3_2:36711415-36711434 Msa0404560:intron 30.0%
! TCATGCATTGTTTGCATTTT+GGG + chr3_2:36711416-36711435 Msa0404560:intron 30.0%
!!! GTAATGGTGGATTATTTTTC+AGG + chr3_2:36711450-36711469 Msa0404560:intron 30.0%
! TCTGTATGTTGCCTTTTATT+AGG + chr3_2:36711631-36711650 Msa0404560:intron 30.0%
GTATATGAGATAAATCCAAG+GGG + chr3_2:36711775-36711794 Msa0404560:intron 30.0%
TATATGAGATAAATCCAAGG+GGG + chr3_2:36711776-36711795 Msa0404560:intron 30.0%
CAGAGACAATGCATAATATA+TGG + chr3_2:36711801-36711820 Msa0404560:intron 30.0%
GACAATGCATAATATATGGA+AGG + chr3_2:36711805-36711824 Msa0404560:intron 30.0%
TGCATAATATATGGAAGGTT+CGG + chr3_2:36711810-36711829 Msa0404560:intron 30.0%
ACTACCAAAAAACAATCCTA+GGG + chr3_2:36711849-36711868 Msa0404560:intron 30.0%
!!! CTTTTTTGGAAACTCATATC+CGG - chr3_2:36712044-36712063 None:intergenic 30.0%
! AATCTTAAGTTGTTGAGAAG+TGG - chr3_2:36712266-36712285 None:intergenic 30.0%
GATTCGAATCAGTTTAATGT+TGG - chr3_2:36712439-36712458 None:intergenic 30.0%
!!! CTTAACTTGTGCTTTTCTTT+TGG + chr3_2:36712501-36712520 Msa0404560:intron 30.0%
!! TTTACTATTTTTCTCCGTAG+AGG - chr3_2:36712567-36712586 None:intergenic 30.0%
!!! ATGGTTTTAAATAGTGGTTG+CGG + chr3_2:36712657-36712676 Msa0404560:intron 30.0%
ACCTAAAAACCGTTATATTG+CGG + chr3_2:36712747-36712766 Msa0404560:intron 30.0%
AAAGATAAGAGACTGATGAA+AGG + chr3_2:36712976-36712995 Msa0404560:CDS 30.0%
! CACTATCATTTTCTGTACAA+TGG - chr3_2:36713194-36713213 None:intergenic 30.0%
CTATAACTGCTGTTAAGAAT+CGG + chr3_2:36713400-36713419 Msa0404560:CDS 30.0%
!! ATTTTGATACAATTCCTCCA+GGG + chr3_2:36713466-36713485 Msa0404560:CDS 30.0%
ATAGTAAACCTACCATTAAC+TGG - chr3_2:36713516-36713535 None:intergenic 30.0%
TTGAACGGGACTTAAAAAAT+TGG - chr3_2:36713554-36713573 None:intergenic 30.0%
ACGTTTATAAGTTCAGAACT+TGG - chr3_2:36713822-36713841 None:intergenic 30.0%
TCTTTATCAGATGATGCTAT+GGG + chr3_2:36713869-36713888 Msa0404560:intron 30.0%
!!! TGCTATGGGTTTTTTTTTGA+AGG + chr3_2:36713883-36713902 Msa0404560:intron 30.0%
ATGAATTATGGCTGTGAAAA+TGG + chr3_2:36713956-36713975 Msa0404560:intron 30.0%
AGACACATTGTCAAAAAGAT+GGG - chr3_2:36714018-36714037 None:intergenic 30.0%
AAGACACATTGTCAAAAAGA+TGG - chr3_2:36714019-36714038 None:intergenic 30.0%
TGCAATCAGATAATAGATCA+AGG - chr3_2:36714155-36714174 None:intergenic 30.0%
CTGATCTTATGAATATGCTT+TGG + chr3_2:36714211-36714230 Msa0404560:intron 30.0%
CAATGGTAACATTAAAGATC+AGG - chr3_2:36714409-36714428 None:intergenic 30.0%
AAGTTCCCAAGATTTACAAA+TGG + chr3_2:36714838-36714857 Msa0404560:CDS 30.0%
ACCTTCCATTTGTAAATCTT+GGG - chr3_2:36714846-36714865 None:intergenic 30.0%
TTGTTCTTTGTTGAATAAGC+TGG - chr3_2:36714919-36714938 None:intergenic 30.0%
! TTTCTAGTGCCATTATAAGA+AGG - chr3_2:36715028-36715047 None:intergenic 30.0%
GTAATGTGAAGAATGTACTA+AGG + chr3_2:36715182-36715201 Msa0404560:CDS 30.0%
ATGCATTGTATTTGAAGGTT+CGG - chr3_2:36715224-36715243 None:intergenic 30.0%
GCATAATTCTCGAATTTCTA+TGG + chr3_2:36715240-36715259 Msa0404560:CDS 30.0%
! AGAAAGCACAAGTATATTTG+TGG - chr3_2:36715306-36715325 None:intergenic 30.0%
AAACTGATGATTACACGAAA+AGG - chr3_2:36715337-36715356 None:intergenic 30.0%
AAAGAATATCATGAGTCAGA+TGG + chr3_2:36715440-36715459 Msa0404560:CDS 30.0%
TTTGCTACCTTATAGTCATA+TGG + chr3_2:36715678-36715697 Msa0404560:intron 30.0%
TATACACAAGCATGGAATAT+GGG - chr3_2:36715757-36715776 None:intergenic 30.0%
ATATACACAAGCATGGAATA+TGG - chr3_2:36715758-36715777 None:intergenic 30.0%
AATCAAGATATACACAAGCA+TGG - chr3_2:36715765-36715784 None:intergenic 30.0%
GATGACTGATCTTAAAATTG+TGG + chr3_2:36716085-36716104 Msa0404560:three_prime_UTR 30.0%
GTTGCAAACACATTCAAAAT+AGG - chr3_2:36716253-36716272 None:intergenic 30.0%
TGAATGTGTTTGCAACTAAA+TGG + chr3_2:36716257-36716276 Msa0404560:three_prime_UTR 30.0%
TTTAGTAGATGAAAAAGAGG+AGG - chr3_2:36716509-36716528 None:intergenic 30.0%
TGACATGTATATACTGCATT+TGG - chr3_2:36716869-36716888 None:intergenic 30.0%
!! ACATGTCATTATTTTGTGGA+TGG + chr3_2:36716881-36716900 Msa0404560:three_prime_UTR 30.0%
!!! TTTTGTGGATGGTTTTATCA+TGG + chr3_2:36716892-36716911 Msa0404560:three_prime_UTR 30.0%
GGAAAATGCAGAAATATGTG+GGG - chr3_2:36711213-36711232 None:intergenic 35.0%
ACCCATTTGAACAAAACCAA+AGG - chr3_2:36711234-36711253 None:intergenic 35.0%
! AAAGGTGCAAACTTTATCAC+TGG - chr3_2:36711274-36711293 None:intergenic 35.0%
TGTTAACACAATACCTTCCA+TGG - chr3_2:36711346-36711365 None:intergenic 35.0%
! CATGCATTGTTTGCATTTTG+GGG + chr3_2:36711417-36711436 Msa0404560:intron 35.0%
! ATGCATTGTTTGCATTTTGG+GGG + chr3_2:36711418-36711437 Msa0404560:intron 35.0%
! TTGGGGGAAGATTTTTGTAA+TGG + chr3_2:36711434-36711453 Msa0404560:intron 35.0%
GCATAATATATGGAAGGTTC+GGG + chr3_2:36711811-36711830 Msa0404560:intron 35.0%
CATAATATATGGAAGGTTCG+GGG + chr3_2:36711812-36711831 Msa0404560:intron 35.0%
!!! CTAGGATTGTTTTTTGGTAG+TGG - chr3_2:36711850-36711869 None:intergenic 35.0%
CACTACCAAAAAACAATCCT+AGG + chr3_2:36711848-36711867 Msa0404560:intron 35.0%
CTACCAAAAAACAATCCTAG+GGG + chr3_2:36711850-36711869 Msa0404560:intron 35.0%
TACCAAAAAACAATCCTAGG+GGG + chr3_2:36711851-36711870 Msa0404560:intron 35.0%
! TGGACTAACACAAGTATTGT+TGG - chr3_2:36711935-36711954 None:intergenic 35.0%
ACTTTGCTCTGACTTCAATT+GGG + chr3_2:36711966-36711985 Msa0404560:intron 35.0%
! GTGAATGGTTTTTGTGAAGA+AGG + chr3_2:36712103-36712122 Msa0404560:intron 35.0%
! TTTTGTGAAGAAGGATTGTG+AGG + chr3_2:36712112-36712131 Msa0404560:intron 35.0%
TTTGTGAAGAAGGATTGTGA+GGG + chr3_2:36712113-36712132 Msa0404560:intron 35.0%
ATTGTGAGGGTAGAAAGAAA+TGG + chr3_2:36712126-36712145 Msa0404560:intron 35.0%
CAACTTAAGATTATTAGGGG+AGG + chr3_2:36712274-36712293 Msa0404560:intron 35.0%
TTCTGCTTCTAGATCAGAAA+AGG + chr3_2:36712378-36712397 Msa0404560:intron 35.0%
GTTAAGTACGCATGTTAGAA+TGG - chr3_2:36712487-36712506 None:intergenic 35.0%
TCTTCTAATTGCAACTCCAT+CGG - chr3_2:36712536-36712555 None:intergenic 35.0%
AGAAGACAATACAACCTCTA+CGG + chr3_2:36712550-36712569 Msa0404560:CDS 35.0%
!!! GGTAAGAGTACTTCTTTTCA+TGG + chr3_2:36712638-36712657 Msa0404560:intron 35.0%
! GCTTCTTTTGTCATATGGAT+AGG + chr3_2:36712794-36712813 Msa0404560:intron 35.0%
TCAAGAACTAAAGCTTAGCA+AGG - chr3_2:36712830-36712849 None:intergenic 35.0%
!! TTGCTAAGCTTTAGTTCTTG+AGG + chr3_2:36712829-36712848 Msa0404560:intron 35.0%
TCAACTTTCATTTCCTCTGT+GGG - chr3_2:36712892-36712911 None:intergenic 35.0%
TTCAACTTTCATTTCCTCTG+TGG - chr3_2:36712893-36712912 None:intergenic 35.0%
GTTGACAGAAAAGCAAATCT+CGG + chr3_2:36712930-36712949 Msa0404560:CDS 35.0%
TTGACAGAAAAGCAAATCTC+GGG + chr3_2:36712931-36712950 Msa0404560:CDS 35.0%
AAAGGTGAAGTATGTGCTAA+TGG + chr3_2:36712994-36713013 Msa0404560:CDS 35.0%
CTATAAGGCTCCATATCATA+TGG - chr3_2:36713285-36713304 None:intergenic 35.0%
!! TTTGGTGTTACGTGTCTATA+AGG - chr3_2:36713300-36713319 None:intergenic 35.0%
TATAGACACGTAACACCAAA+TGG + chr3_2:36713300-36713319 Msa0404560:CDS 35.0%
!! GATTTTGATACAATTCCTCC+AGG + chr3_2:36713465-36713484 Msa0404560:CDS 35.0%
! TTTTGATACAATTCCTCCAG+GGG + chr3_2:36713467-36713486 Msa0404560:CDS 35.0%
CAAACTGCAAATCCAGTTAA+TGG + chr3_2:36713501-36713520 Msa0404560:CDS 35.0%
TCTTGCAAAGCTAATTGAAC+GGG - chr3_2:36713568-36713587 None:intergenic 35.0%
GTCTTGCAAAGCTAATTGAA+CGG - chr3_2:36713569-36713588 None:intergenic 35.0%
! AGACTAGTTATATCTTCTGC+AGG + chr3_2:36713585-36713604 Msa0404560:intron 35.0%
AGTCTACATAGACTCATGAA+AGG - chr3_2:36713645-36713664 None:intergenic 35.0%
ATAAACGTTGTAGCTTGACT+TGG + chr3_2:36713834-36713853 Msa0404560:intron 35.0%
CTCTTTATCAGATGATGCTA+TGG + chr3_2:36713868-36713887 Msa0404560:intron 35.0%
GCATATTCATAAGATCAGAG+AGG - chr3_2:36714209-36714228 None:intergenic 35.0%
TCTGGAGAATTTGAAAGAGA+GGG - chr3_2:36714260-36714279 None:intergenic 35.0%
ATCTGGAGAATTTGAAAGAG+AGG - chr3_2:36714261-36714280 None:intergenic 35.0%
TGATTCGTGATTGACAACAA+TGG - chr3_2:36714426-36714445 None:intergenic 35.0%
CACTGCTAAATAATAGATCG+CGG + chr3_2:36714488-36714507 Msa0404560:intron 35.0%
! CTTTTGAATCCAAATTGGGT+TGG + chr3_2:36714629-36714648 Msa0404560:intron 35.0%
CATATCTCTGCAAATACGTA+TGG - chr3_2:36714799-36714818 None:intergenic 35.0%
TCCCAAGATTTACAAATGGA+AGG + chr3_2:36714842-36714861 Msa0404560:CDS 35.0%
CACCTTCCATTTGTAAATCT+TGG - chr3_2:36714847-36714866 None:intergenic 35.0%
CAAGATTTACAAATGGAAGG+TGG + chr3_2:36714845-36714864 Msa0404560:CDS 35.0%
TTCTTTGTTGAATAAGCTGG+CGG - chr3_2:36714916-36714935 None:intergenic 35.0%
GGCAAATGATTGGTATGAAT+TGG - chr3_2:36714956-36714975 None:intergenic 35.0%
ATTCATACCAATCATTTGCC+TGG + chr3_2:36714956-36714975 Msa0404560:CDS 35.0%
ATTTGAACGTAGACTCAACT+GGG + chr3_2:36714996-36715015 Msa0404560:CDS 35.0%
GGCACTAGAAATCATAGAAT+AGG + chr3_2:36715037-36715056 Msa0404560:CDS 35.0%
TTATTGTAGCCATGTAGTAG+TGG - chr3_2:36715160-36715179 None:intergenic 35.0%
CTACTACATGGCTACAATAA+CGG + chr3_2:36715160-36715179 Msa0404560:CDS 35.0%
! TCTATGGATTCTGAAGAAAG+AGG + chr3_2:36715256-36715275 Msa0404560:CDS 35.0%
! CTATGGATTCTGAAGAAAGA+GGG + chr3_2:36715257-36715276 Msa0404560:CDS 35.0%
GATGACTTAACATGTATGCT+TGG + chr3_2:36715369-36715388 Msa0404560:intron 35.0%
TTGCAGGAAGAAAAGTTCAA+TGG + chr3_2:36715401-36715420 Msa0404560:intron 35.0%
TGCAGGAAGAAAAGTTCAAT+GGG + chr3_2:36715402-36715421 Msa0404560:intron 35.0%
GCATAACTTACTTTCATCTG+TGG + chr3_2:36715504-36715523 Msa0404560:intron 35.0%
TGTTGTAGCACTGTTTATAG+TGG - chr3_2:36715599-36715618 None:intergenic 35.0%
TTCTACCAATTGGTGTATCA+CGG + chr3_2:36715636-36715655 Msa0404560:intron 35.0%
TGTAGCACCATATGACTATA+AGG - chr3_2:36715688-36715707 None:intergenic 35.0%
ATACACAAGCATGGAATATG+GGG - chr3_2:36715756-36715775 None:intergenic 35.0%
! ATGATAATGTAGATCTGCTG+TGG + chr3_2:36715995-36716014 Msa0404560:intron 35.0%
ACTGATCTTAAAATTGTGGG+TGG + chr3_2:36716089-36716108 Msa0404560:three_prime_UTR 35.0%
!!! AGCCACTTTTTGTAGGATTT+TGG + chr3_2:36716184-36716203 Msa0404560:three_prime_UTR 35.0%
TGCCAAAATCCTACAAAAAG+TGG - chr3_2:36716189-36716208 None:intergenic 35.0%
AATTGAAGCTGATTGTTGCA+TGG + chr3_2:36716382-36716401 Msa0404560:three_prime_UTR 35.0%
GTTTGAAGGAACAATGAAGA+AGG - chr3_2:36716487-36716506 None:intergenic 35.0%
ATGAAAAAGAGGAGGTTTGA+AGG - chr3_2:36716501-36716520 None:intergenic 35.0%
TATATCTGTGTGTGATGACA+TGG - chr3_2:36716544-36716563 None:intergenic 35.0%
! TAAAAGTTTTCCCGTCATAC+AGG - chr3_2:36716784-36716803 None:intergenic 35.0%
!!! TCACCAAGTTTTAGGGGTAA+AGG - chr3_2:36711292-36711311 None:intergenic 40.0%
! ACCAGAATTTTTCACAGCCA+TGG + chr3_2:36711326-36711345 Msa0404560:exon 40.0%
TCCATGGCTGTGAAAAATTC+TGG - chr3_2:36711330-36711349 None:intergenic 40.0%
! GAATTTTTCACAGCCATGGA+AGG + chr3_2:36711330-36711349 Msa0404560:exon 40.0%
! GGGGAAGATTTTTGTAATGG+TGG + chr3_2:36711437-36711456 Msa0404560:intron 40.0%
!!! TTGTTTTTTGGTAGTGGTCG+AGG - chr3_2:36711844-36711863 None:intergenic 40.0%
!!! AACCCCCTAGGATTGTTTTT+TGG - chr3_2:36711856-36711875 None:intergenic 40.0%
AAAAAACAATCCTAGGGGGT+TGG + chr3_2:36711855-36711874 Msa0404560:intron 40.0%
TTTGAACCTCAGACCTATAG+AGG - chr3_2:36711901-36711920 None:intergenic 40.0%
GAGCAAAGTCATGTATGAAC+TGG - chr3_2:36711955-36711974 None:intergenic 40.0%
GACTTTGCTCTGACTTCAAT+TGG + chr3_2:36711965-36711984 Msa0404560:intron 40.0%
! AATCTCATTGTGGACTAACG+GGG - chr3_2:36711994-36712013 None:intergenic 40.0%
! CAATCTCATTGTGGACTAAC+GGG - chr3_2:36711995-36712014 None:intergenic 40.0%
! CCAATCTCATTGTGGACTAA+CGG - chr3_2:36711996-36712015 None:intergenic 40.0%
ATAAGAAGCGACTAATCCGA+GGG - chr3_2:36712020-36712039 None:intergenic 40.0%
AGGATCTATCTCATTGAAGC+AGG + chr3_2:36712294-36712313 Msa0404560:intron 40.0%
! TGAAAGGAGCATGCATAACT+AGG - chr3_2:36712322-36712341 None:intergenic 40.0%
GATCAGAAAAGGCAGATTTC+TGG + chr3_2:36712389-36712408 Msa0404560:intron 40.0%
!!! CTTTTGGTTTTCAGAACCGA+TGG + chr3_2:36712517-36712536 Msa0404560:intron 40.0%
!!! CGGTTTTTAGGTATTCGCAA+TGG - chr3_2:36712739-36712758 None:intergenic 40.0%
! GCCGCAATATAACGGTTTTT+AGG - chr3_2:36712751-36712770 None:intergenic 40.0%
CAACTTTCATTTCCTCTGTG+GGG - chr3_2:36712891-36712910 None:intergenic 40.0%
GTAGCTCATCTTTGCAAGAA+CGG + chr3_2:36713238-36713257 Msa0404560:CDS 40.0%
CAAGAACGGTATTATCTCCA+AGG + chr3_2:36713252-36713271 Msa0404560:CDS 40.0%
TATCATATGGATCCTGTCCT+TGG - chr3_2:36713272-36713291 None:intergenic 40.0%
AGGACAGGATCCATATGATA+TGG + chr3_2:36713272-36713291 Msa0404560:CDS 40.0%
TATCCTGTAGGATTTAAGGG+TGG - chr3_2:36713333-36713352 None:intergenic 40.0%
CCTGATGGTTTATATCCTGT+AGG - chr3_2:36713345-36713364 None:intergenic 40.0%
CCTACAGGATATAAACCATC+AGG + chr3_2:36713342-36713361 Msa0404560:CDS 40.0%
GAAGAAAGAGATAGAGCATG+CGG + chr3_2:36713377-36713396 Msa0404560:CDS 40.0%
ACTGCTGTTAAGAATCGGTT+AGG + chr3_2:36713405-36713424 Msa0404560:CDS 40.0%
CTGTTAAGAATCGGTTAGGA+AGG + chr3_2:36713409-36713428 Msa0404560:CDS 40.0%
!!! TCGGTTAGGAAGGTATTTTC+TGG + chr3_2:36713419-36713438 Msa0404560:CDS 40.0%
!!! GGAAGGTATTTTCTGGAAGA+TGG + chr3_2:36713426-36713445 Msa0404560:CDS 40.0%
! GTTTGAAATTCAAATGCCCC+TGG - chr3_2:36713486-36713505 None:intergenic 40.0%
CTGCAAATCCAGTTAATGGT+AGG + chr3_2:36713505-36713524 Msa0404560:intron 40.0%
TCAAAAAGATGGGCATGTGA+TGG - chr3_2:36714008-36714027 None:intergenic 40.0%
! CAATGTGTCTTCGCTTGTTT+TGG + chr3_2:36714028-36714047 Msa0404560:intron 40.0%
CTGGAGAATTTGAAAGAGAG+GGG - chr3_2:36714259-36714278 None:intergenic 40.0%
TTAGACACGATTGCCTGTTT+GGG - chr3_2:36714292-36714311 None:intergenic 40.0%
TTTAGACACGATTGCCTGTT+TGG - chr3_2:36714293-36714312 None:intergenic 40.0%
CAAAACTAGCTCACCGAAAT+CGG - chr3_2:36714724-36714743 None:intergenic 40.0%
CTGGAAATCAGAATCATGCA+TGG - chr3_2:36714882-36714901 None:intergenic 40.0%
CATGCATGATTCTGATTTCC+AGG + chr3_2:36714880-36714899 Msa0404560:CDS 40.0%
TCTTTGTTGAATAAGCTGGC+GGG - chr3_2:36714915-36714934 None:intergenic 40.0%
GATTTGAACGTAGACTCAAC+TGG + chr3_2:36714995-36715014 Msa0404560:CDS 40.0%
TTTGAACGTAGACTCAACTG+GGG + chr3_2:36714997-36715016 Msa0404560:CDS 40.0%
CATAGAATAGGCACTAAGCA+TGG + chr3_2:36715049-36715068 Msa0404560:CDS 40.0%
!!! GCACTAAGCATGGTTTTGAA+AGG + chr3_2:36715059-36715078 Msa0404560:CDS 40.0%
AAGTCAGATCCACTACTACA+TGG + chr3_2:36715148-36715167 Msa0404560:CDS 40.0%
GTGAAGAATGTACTAAGGTG+TGG + chr3_2:36715187-36715206 Msa0404560:CDS 40.0%
AAGAAAGAGGGCTTTCTGAA+AGG + chr3_2:36715269-36715288 Msa0404560:CDS 40.0%
!!! TGCTTGGTTGCATTTTTTGC+AGG + chr3_2:36715385-36715404 Msa0404560:intron 40.0%
! ATTGCCTTTGAGAGAAACTG+TGG + chr3_2:36715469-36715488 Msa0404560:CDS 40.0%
!! TCTATCGGTGTTGTCAATTG+TGG + chr3_2:36715545-36715564 Msa0404560:intron 40.0%
ATTGTGGTCGCAGAAAATAG+CGG + chr3_2:36715561-36715580 Msa0404560:intron 40.0%
TTGTTCCGTGATACACCAAT+TGG - chr3_2:36715644-36715663 None:intergenic 40.0%
TTGAACCAAGGAAAACTCAG+AGG + chr3_2:36715888-36715907 Msa0404560:CDS 40.0%
TCATCCTCACTAAAGCTAGA+CGG - chr3_2:36716026-36716045 None:intergenic 40.0%
AAATGGAAACCCTATTGCAG+CGG + chr3_2:36716274-36716293 Msa0404560:three_prime_UTR 40.0%
TCCAAACAACTCGATCTCAA+CGG - chr3_2:36716326-36716345 None:intergenic 40.0%
! GTTTGGAATCAAGCTTACTG+TGG + chr3_2:36716339-36716358 Msa0404560:three_prime_UTR 40.0%
! AGCTGATTGTTGCATGGTTT+TGG + chr3_2:36716388-36716407 Msa0404560:three_prime_UTR 40.0%
CAATGAAGAAGGTAGATGGA+TGG - chr3_2:36716476-36716495 None:intergenic 40.0%
GGAACAATGAAGAAGGTAGA+TGG - chr3_2:36716480-36716499 None:intergenic 40.0%
CTTAATGTAGTCGCAACACA+TGG - chr3_2:36716698-36716717 None:intergenic 40.0%
AGATCATGTAGTTCGGAATC+AGG - chr3_2:36716721-36716740 None:intergenic 40.0%
! GTTTTATCATGGCAGTGCTT+TGG + chr3_2:36716903-36716922 Msa0404560:three_prime_UTR 40.0%
GCACCTTTACCCCTAAAACT+TGG + chr3_2:36711286-36711305 Msa0404560:five_prime_UTR 45.0%
! ACAAGTATTGTTGGCACCTG+GGG - chr3_2:36711926-36711945 None:intergenic 45.0%
! CACAAGTATTGTTGGCACCT+GGG - chr3_2:36711927-36711946 None:intergenic 45.0%
! ACACAAGTATTGTTGGCACC+TGG - chr3_2:36711928-36711947 None:intergenic 45.0%
CCGTTAGTCCACAATGAGAT+TGG + chr3_2:36711993-36712012 Msa0404560:intron 45.0%
CATAAGAAGCGACTAATCCG+AGG - chr3_2:36712021-36712040 None:intergenic 45.0%
!! GGATTAGTCGCTTCTTATGC+CGG + chr3_2:36712022-36712041 Msa0404560:intron 45.0%
TGAGGGTAGAAAGAAATGGC+TGG + chr3_2:36712130-36712149 Msa0404560:intron 45.0%
GTAGAAAGAAATGGCTGGCA+TGG + chr3_2:36712135-36712154 Msa0404560:intron 45.0%
TAAAACCCCTGCACAGCTTA+TGG + chr3_2:36712595-36712614 Msa0404560:CDS 45.0%
TGGCATCACAACAGCAATAG+CGG - chr3_2:36712719-36712738 None:intergenic 45.0%
CAGAAAAGCAAATCTCGGGA+TGG + chr3_2:36712935-36712954 Msa0404560:CDS 45.0%
!! TCATGTGGAAGCACTAAGCA+TGG + chr3_2:36713075-36713094 Msa0404560:CDS 45.0%
CCATGACTCTCAACCTCTTT+GGG - chr3_2:36713120-36713139 None:intergenic 45.0%
ACCATGACTCTCAACCTCTT+TGG - chr3_2:36713121-36713140 None:intergenic 45.0%
TGCAAAGATGAGCTACTCTC+AGG - chr3_2:36713234-36713253 None:intergenic 45.0%
ACGGTATTATCTCCAAGGAC+AGG + chr3_2:36713257-36713276 Msa0404560:CDS 45.0%
CTTCCACCCTTAAATCCTAC+AGG + chr3_2:36713327-36713346 Msa0404560:CDS 45.0%
TGAAATTCAAATGCCCCTGG+AGG - chr3_2:36713483-36713502 None:intergenic 45.0%
TAGACTCATGAAAGGTCCGT+TGG - chr3_2:36713637-36713656 None:intergenic 45.0%
AAAGAGAGGGGTTTGCATCA+TGG - chr3_2:36714247-36714266 None:intergenic 45.0%
TAGACACGATTGCCTGTTTG+GGG - chr3_2:36714291-36714310 None:intergenic 45.0%
AATAGATCGCGGAACAAGAG+TGG + chr3_2:36714499-36714518 Msa0404560:intron 45.0%
CTTGAGAGGATTACACTCCA+AGG - chr3_2:36714676-36714695 None:intergenic 45.0%
CTTGGAGTGTAATCCTCTCA+AGG + chr3_2:36714674-36714693 Msa0404560:intron 45.0%
TGTAATCCTCTCAAGGTCTC+AGG + chr3_2:36714681-36714700 Msa0404560:intron 45.0%
ATTGAACCTGAGACCTTGAG+AGG - chr3_2:36714690-36714709 None:intergenic 45.0%
ACAAATGGAAGGTGGTGACT+TGG + chr3_2:36714853-36714872 Msa0404560:CDS 45.0%
CAAATGGAAGGTGGTGACTT+GGG + chr3_2:36714854-36714873 Msa0404560:CDS 45.0%
GTTCTTGCCAGGCAAATGAT+TGG - chr3_2:36714966-36714985 None:intergenic 45.0%
GAGTCTACGTTCAAATCCAC+AGG - chr3_2:36714992-36715011 None:intergenic 45.0%
!! GGGGAAGCACCTTCTTATAA+TGG + chr3_2:36715016-36715035 Msa0404560:CDS 45.0%
! TCGTGATAGCGATGATCACT+GGG - chr3_2:36715109-36715128 None:intergenic 45.0%
TCGCTATCACGAGAATAACC+CGG + chr3_2:36715117-36715136 Msa0404560:CDS 45.0%
GATCTGACTTCATAATCGCC+GGG - chr3_2:36715138-36715157 None:intergenic 45.0%
GGATCTGACTTCATAATCGC+CGG - chr3_2:36715139-36715158 None:intergenic 45.0%
! AAGAGGGCTTTCTGAAAGGA+TGG + chr3_2:36715273-36715292 Msa0404560:CDS 45.0%
! GCTTTCTGAAAGGATGGCAA+AGG + chr3_2:36715279-36715298 Msa0404560:CDS 45.0%
CTCACCACAGTTTCTCTCAA+AGG - chr3_2:36715476-36715495 None:intergenic 45.0%
AGAGAAACTGTGGTGAGTCT+TGG + chr3_2:36715479-36715498 Msa0404560:intron 45.0%
AAGCATGGAATATGGGGAAC+GGG - chr3_2:36715750-36715769 None:intergenic 45.0%
CAAGCATGGAATATGGGGAA+CGG - chr3_2:36715751-36715770 None:intergenic 45.0%
CTTGGTTCAATCTCAGCAAC+AGG - chr3_2:36715878-36715897 None:intergenic 45.0%
CTGTTGCTGAGATTGAACCA+AGG + chr3_2:36715876-36715895 Msa0404560:CDS 45.0%
! TGTCACCTCTGAGTTTTCCT+TGG - chr3_2:36715896-36715915 None:intergenic 45.0%
TGATGAAACCAGTTCCTCCA+TGG + chr3_2:36716052-36716071 Msa0404560:CDS 45.0%
GATGAAACCAGTTCCTCCAT+GGG + chr3_2:36716053-36716072 Msa0404560:CDS 45.0%
TGGGTGGTTTCTCTAAGTCA+TGG + chr3_2:36716105-36716124 Msa0404560:three_prime_UTR 45.0%
GGGTGGTTTCTCTAAGTCAT+GGG + chr3_2:36716106-36716125 Msa0404560:three_prime_UTR 45.0%
GGTGGTTTCTCTAAGTCATG+GGG + chr3_2:36716107-36716126 Msa0404560:three_prime_UTR 45.0%
!!! CAATGGGAGCCACTTTTTGT+AGG + chr3_2:36716177-36716196 Msa0404560:three_prime_UTR 45.0%
CACTCAAAACCGCTGCAATA+GGG - chr3_2:36716286-36716305 None:intergenic 45.0%
ACACTCAAAACCGCTGCAAT+AGG - chr3_2:36716287-36716306 None:intergenic 45.0%
! ACCGTTGAGATCGAGTTGTT+TGG + chr3_2:36716322-36716341 Msa0404560:three_prime_UTR 45.0%
TGGAGGGAGTGAAGAAAATG+TGG - chr3_2:36716456-36716475 None:intergenic 45.0%
GAAGAAGGTAGATGGATGGA+GGG - chr3_2:36716472-36716491 None:intergenic 45.0%
TGAAGAAGGTAGATGGATGG+AGG - chr3_2:36716473-36716492 None:intergenic 45.0%
TGTCCAAGACCACCAATAAC+CGG + chr3_2:36716663-36716682 Msa0404560:three_prime_UTR 45.0%
AATTGAAGCCCGGTTATTGG+TGG - chr3_2:36716675-36716694 None:intergenic 45.0%
TGGAATTGAAGCCCGGTTAT+TGG - chr3_2:36716678-36716697 None:intergenic 45.0%
CAACACATGGAATTGAAGCC+CGG - chr3_2:36716685-36716704 None:intergenic 45.0%
TCCGAACTACATGATCTGAG+CGG + chr3_2:36716724-36716743 Msa0404560:three_prime_UTR 45.0%
ATTTCTCATGCAGCTGCTTG+TGG + chr3_2:36716833-36716852 Msa0404560:three_prime_UTR 45.0%
ATGCAGCTGCTTGTGGTAAT+AGG + chr3_2:36716840-36716859 Msa0404560:three_prime_UTR 45.0%
TGCAGCTGCTTGTGGTAATA+GGG + chr3_2:36716841-36716860 Msa0404560:three_prime_UTR 45.0%
!!! TATTTAAAATATAATTTCTT+AGG + chr3_2:36711497-36711516 Msa0404560:intron 5.0%
!!! CTAAATATTTATTTTATATT+TGG - chr3_2:36711546-36711565 None:intergenic 5.0%
!!! TTTTTTTTTTTAATATTGTT+TGG - chr3_2:36716609-36716628 None:intergenic 5.0%
! GTGAAGGCTTGCTCCTCTAT+AGG + chr3_2:36711885-36711904 Msa0404560:intron 50.0%
CTTGCTCCTCTATAGGTCTG+AGG + chr3_2:36711892-36711911 Msa0404560:intron 50.0%
! CAAGTATTGTTGGCACCTGG+GGG - chr3_2:36711925-36711944 None:intergenic 50.0%
! CCACAATGAGATTGGTCCCT+CGG + chr3_2:36712001-36712020 Msa0404560:intron 50.0%
GGTCTGCAGCCGCAATATAA+CGG - chr3_2:36712759-36712778 None:intergenic 50.0%
! TCTGTGGGGTATTTGTGCTC+TGG - chr3_2:36712877-36712896 None:intergenic 50.0%
AGAGCACAAATACCCCACAG+AGG + chr3_2:36712876-36712895 Msa0404560:intron 50.0%
GGACGACAAGATCGATCAAG+TGG + chr3_2:36713015-36713034 Msa0404560:CDS 50.0%
GTTGTTCAAGACCGTGTCAG+TGG + chr3_2:36713039-36713058 Msa0404560:CDS 50.0%
!! AAGACCGTGTCAGTGGACTA+GGG + chr3_2:36713046-36713065 Msa0404560:CDS 50.0%
GGACTAGGGCAAGATTCATG+TGG + chr3_2:36713060-36713079 Msa0404560:CDS 50.0%
GCACTAAGCATGGTGAGTAC+AGG + chr3_2:36713085-36713104 Msa0404560:CDS 50.0%
GCATGGTGAGTACAGGTGTT+TGG + chr3_2:36713092-36713111 Msa0404560:CDS 50.0%
CAGGTGTTTGGATCCCAAAG+AGG + chr3_2:36713104-36713123 Msa0404560:CDS 50.0%
CCCAAAGAGGTTGAGAGTCA+TGG + chr3_2:36713117-36713136 Msa0404560:CDS 50.0%
AAGGGTGGAAGAGCTCCATT+TGG - chr3_2:36713318-36713337 None:intergenic 50.0%
! GAGTTCACGAGTTGAGCCAA+CGG + chr3_2:36713618-36713637 Msa0404560:intron 50.0%
GATTGTTCGAGCTGCAGACA+AGG + chr3_2:36713790-36713809 Msa0404560:intron 50.0%
GATTACACTCCAAGGTCCCA+AGG - chr3_2:36714668-36714687 None:intergenic 50.0%
GTCTCAGGTTCAATTCTCCC+TGG + chr3_2:36714696-36714715 Msa0404560:intron 50.0%
!! ATTCTCCCTGGTGCCGATTT+CGG + chr3_2:36714708-36714727 Msa0404560:intron 50.0%
TCCACAGGAAAGTTCTTGCC+AGG - chr3_2:36714977-36714996 None:intergenic 50.0%
! CTCGTGATAGCGATGATCAC+TGG - chr3_2:36715110-36715129 None:intergenic 50.0%
!! GTTGCCGTCTAGCTTTAGTG+AGG + chr3_2:36716019-36716038 Msa0404560:CDS 50.0%
AGTCATCAGCACTCAACCCA+TGG - chr3_2:36716072-36716091 None:intergenic 50.0%
GTGGCTCCCATTGTGTGAAT+AGG - chr3_2:36716170-36716189 None:intergenic 50.0%
GTCCAAGACCACCAATAACC+GGG + chr3_2:36716664-36716683 Msa0404560:three_prime_UTR 50.0%
GCCGCTCAGATCATGTAGTT+CGG - chr3_2:36716728-36716747 None:intergenic 50.0%
! CATACAGGAGAGGCGGTTTT+GGG - chr3_2:36716769-36716788 None:intergenic 50.0%
! TCATACAGGAGAGGCGGTTT+TGG - chr3_2:36716770-36716789 None:intergenic 50.0%
AAACCGCCTCTCCTGTATGA+CGG + chr3_2:36716770-36716789 Msa0404560:three_prime_UTR 50.0%
! GTTTTCCCGTCATACAGGAG+AGG - chr3_2:36716779-36716798 None:intergenic 50.0%
AGGAGCAAGCCTTCACCACT+AGG - chr3_2:36711881-36711900 None:intergenic 55.0%
! GTCTGAGGTTCAAATCCCCC+AGG + chr3_2:36711907-36711926 Msa0404560:intron 55.0%
CCGAGGGACCAATCTCATTG+TGG - chr3_2:36712004-36712023 None:intergenic 55.0%
AAGAAATGGCTGGCATGGCG+TGG + chr3_2:36712140-36712159 Msa0404560:intron 55.0%
CAAGGCCATAAGCTGTGCAG+GGG - chr3_2:36712603-36712622 None:intergenic 55.0%
CCAAGGCCATAAGCTGTGCA+GGG - chr3_2:36712604-36712623 None:intergenic 55.0%
TCCAAGGCCATAAGCTGTGC+AGG - chr3_2:36712605-36712624 None:intergenic 55.0%
! CAAGACCGTGTCAGTGGACT+AGG + chr3_2:36713045-36713064 Msa0404560:CDS 55.0%
CTTGCCCTAGTCCACTGACA+CGG - chr3_2:36713053-36713072 None:intergenic 55.0%
!! GGGCATGTGATGGACATGTG+TGG - chr3_2:36713998-36714017 None:intergenic 55.0%
! CTGTTTGGGGCAGAGTCATC+TGG - chr3_2:36714278-36714297 None:intergenic 55.0%
CAGATGACTCTGCCCCAAAC+AGG + chr3_2:36714276-36714295 Msa0404560:CDS 55.0%
GTTGTCAGACTGCTGCGATG+CGG - chr3_2:36714469-36714488 None:intergenic 55.0%
!! TCCAAATTGGGTTGGCCTCG+TGG + chr3_2:36714637-36714656 Msa0404560:intron 55.0%
ACCACGAGGCCAACCCAATT+TGG - chr3_2:36714641-36714660 None:intergenic 55.0%
!! TTGGCCTCGTGGTGTTACCT+TGG + chr3_2:36714648-36714667 Msa0404560:intron 55.0%
!! TGGCCTCGTGGTGTTACCTT+GGG + chr3_2:36714649-36714668 Msa0404560:intron 55.0%
!! GTGGTGTTACCTTGGGACCT+TGG + chr3_2:36714656-36714675 Msa0404560:intron 55.0%
GCTGGCGGGATTTCTTATCC+TGG - chr3_2:36714901-36714920 None:intergenic 55.0%
GCCTGGCAAGAACTTTCCTG+TGG + chr3_2:36714973-36714992 Msa0404560:CDS 55.0%
CACTCAACCCATGGAGGAAC+TGG - chr3_2:36716063-36716082 None:intergenic 55.0%
CATCAGCACTCAACCCATGG+AGG - chr3_2:36716069-36716088 None:intergenic 55.0%
! AGCCCGGTTATTGGTGGTCT+TGG - chr3_2:36716669-36716688 None:intergenic 55.0%
!! TTTGGGTGTCGAGGCAACAG+CGG - chr3_2:36716752-36716771 None:intergenic 55.0%
AACCGCCTCTCCTGTATGAC+GGG + chr3_2:36716771-36716790 Msa0404560:three_prime_UTR 55.0%
TTCCCGTCATACAGGAGAGG+CGG - chr3_2:36716776-36716795 None:intergenic 55.0%
GCATTGTCTCTGAGCCCCCT+TGG - chr3_2:36711793-36711812 None:intergenic 60.0%
!! ATCCTAGGGGGTTGGCCTAG+TGG + chr3_2:36711863-36711882 Msa0404560:intron 60.0%
CCCTGCACAGCTTATGGCCT+TGG + chr3_2:36712601-36712620 Msa0404560:CDS 60.0%
GGTCCCAAGGTAACACCACG+AGG - chr3_2:36714655-36714674 None:intergenic 60.0%
GCTCACCGAAATCGGCACCA+GGG - chr3_2:36714716-36714735 None:intergenic 60.0%
AGCTCACCGAAATCGGCACC+AGG - chr3_2:36714717-36714736 None:intergenic 60.0%
!!! AGAGGCGGTTTTGGGTGTCG+AGG - chr3_2:36716761-36716780 None:intergenic 60.0%
CACCACTAGGCCAACCCCCT+AGG - chr3_2:36711868-36711887 None:intergenic 65.0%
!! GGGGGTTGGCCTAGTGGTGA+AGG + chr3_2:36711869-36711888 Msa0404560:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 36711050 36716947 36711050 ID=Msa0404560;Name=Msa0404560
chr3_2 mRNA 36711050 36716947 36711050 ID=Msa0404560-mRNA-1;Parent=Msa0404560;Name=Msa0404560-mRNA-1;_AED=0.03;_eAED=0.03;_QI=295|1|1|1|0.85|0.87|8|868|524
chr3_2 exon 36711050 36711351 36711050 ID=Msa0404560-mRNA-1:exon:7327;Parent=Msa0404560-mRNA-1
chr3_2 exon 36712531 36712638 36712531 ID=Msa0404560-mRNA-1:exon:7328;Parent=Msa0404560-mRNA-1
chr3_2 exon 36712878 36713522 36712878 ID=Msa0404560-mRNA-1:exon:7329;Parent=Msa0404560-mRNA-1
chr3_2 exon 36714237 36714316 36714237 ID=Msa0404560-mRNA-1:exon:7330;Parent=Msa0404560-mRNA-1
chr3_2 exon 36714812 36715300 36714812 ID=Msa0404560-mRNA-1:exon:7331;Parent=Msa0404560-mRNA-1
chr3_2 exon 36715407 36715490 36715407 ID=Msa0404560-mRNA-1:exon:7332;Parent=Msa0404560-mRNA-1
chr3_2 exon 36715821 36715909 36715821 ID=Msa0404560-mRNA-1:exon:7333;Parent=Msa0404560-mRNA-1
chr3_2 exon 36716007 36716947 36716007 ID=Msa0404560-mRNA-1:exon:7334;Parent=Msa0404560-mRNA-1
chr3_2 five_prime_UTR 36711050 36711344 36711050 ID=Msa0404560-mRNA-1:five_prime_utr;Parent=Msa0404560-mRNA-1
chr3_2 CDS 36711345 36711351 36711345 ID=Msa0404560-mRNA-1:cds;Parent=Msa0404560-mRNA-1
chr3_2 CDS 36712531 36712638 36712531 ID=Msa0404560-mRNA-1:cds;Parent=Msa0404560-mRNA-1
chr3_2 CDS 36712878 36713522 36712878 ID=Msa0404560-mRNA-1:cds;Parent=Msa0404560-mRNA-1
chr3_2 CDS 36714237 36714316 36714237 ID=Msa0404560-mRNA-1:cds;Parent=Msa0404560-mRNA-1
chr3_2 CDS 36714812 36715300 36714812 ID=Msa0404560-mRNA-1:cds;Parent=Msa0404560-mRNA-1
chr3_2 CDS 36715407 36715490 36715407 ID=Msa0404560-mRNA-1:cds;Parent=Msa0404560-mRNA-1
chr3_2 CDS 36715821 36715909 36715821 ID=Msa0404560-mRNA-1:cds;Parent=Msa0404560-mRNA-1
chr3_2 CDS 36716007 36716079 36716007 ID=Msa0404560-mRNA-1:cds;Parent=Msa0404560-mRNA-1
chr3_2 three_prime_UTR 36716080 36716947 36716080 ID=Msa0404560-mRNA-1:three_prime_utr;Parent=Msa0404560-mRNA-1
Gene Sequence

>Msa0404560

ATGGAAGAACCGATGGAGTTGCAATTAGAAGACAATACAACCTCTACGGAGAAAAATAGTAAAAGAAAGCTTAAAACCCCTGCACAGCTTATGGCCTTGGAAAATTTTTATAACGAGCACAAATACCCCACAGAGGAAATGAAAGTTGAACTTGCTAATGAACTAGCGTTGACAGAAAAGCAAATCTCGGGATGGTTTTGTCATAGAAGATTAAAAGATAAGAGACTGATGAAAGGTGAAGTATGTGCTAATGGACGACAAGATCGATCAAGTGGTGTTGTTCAAGACCGTGTCAGTGGACTAGGGCAAGATTCATGTGGAAGCACTAAGCATGGTGAGTACAGGTGTTTGGATCCCAAAGAGGTTGAGAGTCATGGTCTCTATAATCATGAAGTGTTAGTTGCAGATATGAAATATGTTCATAGAAACCATTGTACAGAAAATGATAGTGAAACGGATAACTCATCACCTGAGAGTAGCTCATCTTTGCAAGAACGGTATTATCTCCAAGGACAGGATCCATATGATATGGAGCCTTATAGACACGTAACACCAAATGGAGCTCTTCCACCCTTAAATCCTACAGGATATAAACCATCAGGATATTTAAAAGTGAAGAAAGAGATAGAGCATGCGGCTATAACTGCTGTTAAGAATCGGTTAGGAAGGTATTTTCTGGAAGATGGCCCACTACTTAATGTAGATTTTGATACAATTCCTCCAGGGGCATTTGAATTTCAAACTGCAAATCCAGTTAATGAAACATACCATGATGCAAACCCCTCTCTTTCAAATTCTCCAGATGACTCTGCCCCAAACAGGCAATCGTGTCTAAACTCTAGATATGATTTACATATGAACAGATTAAGTTCCCAAGATTTACAAATGGAAGGTGGTGACTTGGGCTCCATGCATGATTCTGATTTCCAGGATAAGAAATCCCGCCAGCTTATTCAACAAAGAACAAATTTTCAGGATCGTCCAATTCATACCAATCATTTGCCTGGCAAGAACTTTCCTGTGGATTTGAACGTAGACTCAACTGGGGAAGCACCTTCTTATAATGGCACTAGAAATCATAGAATAGGCACTAAGCATGGTTTTGAAAGGATGAGATCTGATTCTGCTTCTAATCCCAGTGATCATCGCTATCACGAGAATAACCCGGCGATTATGAAGTCAGATCCACTACTACATGGCTACAATAACGGTAATGTGAAGAATGTACTAAGGTGTGGATATATAAAATCCGAACCTTCAAATACAATGCATAATTCTCGAATTTCTATGGATTCTGAAGAAAGAGGGCTTTCTGAAAGGATGGCAAAGGAAGAAAAGTTCAATGGGACTAGAAAGATTAAAAAAGAATATCATGAGTCAGATGGAGTAAGATTGCCTTTGAGAGAAACTGTGGTTGCAAAGCGAGCTAAGTTTGATTTACTTCATCAATATCATATTAAACAAGAACCTGTTGCTGAGATTGAACCAAGGAAAACTCAGAGATCTGCTGTGGTGTTGCCGTCTAGCTTTAGTGAGGATGATGAAACTGATGAAACCAGTTCCTCCATGGGTTGA
Protein sequence

>Msa0404560

MEEPMELQLEDNTTSTEKNSKRKLKTPAQLMALENFYNEHKYPTEEMKVELANELALTEKQISGWFCHRRLKDKRLMKGEVCANGRQDRSSGVVQDRVSGLGQDSCGSTKHGEYRCLDPKEVESHGLYNHEVLVADMKYVHRNHCTENDSETDNSSPESSSSLQERYYLQGQDPYDMEPYRHVTPNGALPPLNPTGYKPSGYLKVKKEIEHAAITAVKNRLGRYFLEDGPLLNVDFDTIPPGAFEFQTANPVNETYHDANPSLSNSPDDSAPNRQSCLNSRYDLHMNRLSSQDLQMEGGDLGSMHDSDFQDKKSRQLIQQRTNFQDRPIHTNHLPGKNFPVDLNVDSTGEAPSYNGTRNHRIGTKHGFERMRSDSASNPSDHRYHENNPAIMKSDPLLHGYNNGNVKNVLRCGYIKSEPSNTMHNSRISMDSEERGLSERMAKEEKFNGTRKIKKEYHESDGVRLPLRETVVAKRAKFDLLHQYHIKQEPVAEIEPRKTQRSAVVLPSSFSEDDETDETSSSMG*