Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404940 | XP_013459622.1 | 97.246 | 581 | 16 | 0 | 1 | 581 | 1 | 581 | 0.0 | 1153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404940 | sp|Q9FNN2|WDR26_ARATH | 58.404 | 589 | 231 | 4 | 1 | 577 | 1 | 587 | 0.0 | 722 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404940 | A0A072UX44 | 97.246 | 581 | 16 | 0 | 1 | 581 | 1 | 581 | 0.0 | 1153 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0256500 | Msa0404940 | 0.813685 | 2.258223e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404940 | MtrunA17_Chr3g0095501 | 97.246 | 581 | 16 | 0 | 1 | 581 | 1 | 581 | 0.0 | 1153 |
| Msa0404940 | MtrunA17_Chr5g0442391 | 76.603 | 577 | 127 | 4 | 1 | 577 | 1 | 569 | 0.0 | 882 |
| Msa0404940 | MtrunA17_Chr1g0183051 | 46.154 | 507 | 263 | 3 | 52 | 556 | 6 | 504 | 9.51e-161 | 469 |
| Msa0404940 | MtrunA17_Chr3g0095471 | 67.474 | 289 | 85 | 3 | 1 | 288 | 1 | 281 | 8.53e-111 | 333 |
| Msa0404940 | MtrunA17_Chr1g0185501 | 30.132 | 302 | 201 | 7 | 259 | 555 | 16 | 312 | 1.14e-38 | 144 |
| Msa0404940 | MtrunA17_Chr4g0067151 | 26.623 | 308 | 213 | 7 | 259 | 555 | 16 | 321 | 2.82e-30 | 121 |
| Msa0404940 | MtrunA17_Chr8g0383711 | 22.819 | 298 | 224 | 5 | 258 | 555 | 6 | 297 | 7.53e-22 | 96.3 |
| Msa0404940 | MtrunA17_Chr7g0253861 | 23.179 | 302 | 215 | 10 | 263 | 554 | 48 | 342 | 3.16e-20 | 92.4 |
| Msa0404940 | MtrunA17_Chr5g0401661 | 26.879 | 346 | 200 | 13 | 263 | 573 | 328 | 655 | 2.55e-19 | 92.0 |
| Msa0404940 | MtrunA17_Chr3g0136971 | 33.143 | 175 | 110 | 4 | 268 | 439 | 459 | 629 | 7.91e-19 | 90.5 |
| Msa0404940 | MtrunA17_Chr5g0401671 | 25.970 | 335 | 215 | 11 | 263 | 573 | 240 | 565 | 9.67e-18 | 86.7 |
| Msa0404940 | MtrunA17_Chr1g0200901 | 26.421 | 299 | 201 | 10 | 266 | 558 | 119 | 404 | 1.57e-17 | 85.1 |
| Msa0404940 | MtrunA17_Chr4g0053651 | 25.074 | 339 | 225 | 10 | 257 | 573 | 217 | 548 | 7.41e-17 | 84.0 |
| Msa0404940 | MtrunA17_Chr1g0176241 | 25.868 | 317 | 197 | 12 | 256 | 558 | 150 | 442 | 3.72e-16 | 81.3 |
| Msa0404940 | MtrunA17_Chr5g0405851 | 29.444 | 180 | 119 | 5 | 263 | 439 | 288 | 462 | 3.30e-14 | 75.1 |
| Msa0404940 | MtrunA17_Chr1g0172501 | 30.460 | 174 | 113 | 5 | 269 | 439 | 397 | 565 | 5.46e-14 | 74.7 |
| Msa0404940 | MtrunA17_Chr3g0103361 | 25.000 | 288 | 202 | 9 | 268 | 550 | 17 | 295 | 7.17e-14 | 72.8 |
| Msa0404940 | MtrunA17_Chr3g0093681 | 30.460 | 174 | 113 | 5 | 269 | 439 | 397 | 565 | 1.17e-13 | 73.9 |
| Msa0404940 | MtrunA17_Chr4g0058091 | 24.522 | 314 | 209 | 11 | 255 | 555 | 215 | 513 | 1.27e-13 | 73.6 |
| Msa0404940 | MtrunA17_Chr6g0448921 | 26.115 | 157 | 111 | 3 | 260 | 415 | 91 | 243 | 2.97e-13 | 72.8 |
| Msa0404940 | MtrunA17_Chr7g0266251 | 24.917 | 301 | 170 | 9 | 278 | 557 | 77 | 342 | 3.67e-13 | 71.2 |
| Msa0404940 | MtrunA17_Chr8g0361561 | 25.077 | 323 | 215 | 11 | 252 | 555 | 101 | 415 | 5.58e-13 | 71.2 |
| Msa0404940 | MtrunA17_Chr3g0116561 | 23.759 | 282 | 163 | 11 | 278 | 555 | 275 | 508 | 2.06e-11 | 66.6 |
| Msa0404940 | MtrunA17_Chr3g0138311 | 26.761 | 284 | 188 | 12 | 277 | 555 | 628 | 896 | 2.66e-11 | 66.6 |
| Msa0404940 | MtrunA17_Chr2g0281451 | 21.656 | 157 | 120 | 1 | 260 | 416 | 90 | 243 | 5.72e-11 | 65.9 |
| Msa0404940 | MtrunA17_Chr1g0171711 | 23.860 | 285 | 196 | 12 | 277 | 555 | 516 | 785 | 6.44e-11 | 65.5 |
| Msa0404940 | MtrunA17_Chr8g0392701 | 27.835 | 194 | 130 | 5 | 372 | 557 | 31 | 222 | 7.10e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404940 | AT5G08560.1 | 58.404 | 589 | 231 | 4 | 1 | 577 | 1 | 587 | 0.0 | 722 |
| Msa0404940 | AT5G08560.2 | 58.404 | 589 | 231 | 4 | 1 | 577 | 1 | 587 | 0.0 | 722 |
| Msa0404940 | AT5G08560.3 | 58.404 | 589 | 231 | 4 | 1 | 577 | 1 | 587 | 0.0 | 722 |
| Msa0404940 | AT5G43920.1 | 47.945 | 511 | 256 | 5 | 53 | 556 | 7 | 514 | 1.53e-161 | 471 |
| Msa0404940 | AT4G02730.1 | 31.023 | 303 | 198 | 9 | 259 | 555 | 32 | 329 | 9.57e-34 | 131 |
| Msa0404940 | AT3G49660.1 | 28.000 | 300 | 209 | 6 | 264 | 558 | 18 | 315 | 1.97e-31 | 124 |
| Msa0404940 | AT3G49660.1 | 34.328 | 134 | 83 | 3 | 261 | 391 | 146 | 277 | 1.47e-13 | 72.4 |
| Msa0404940 | AT2G43770.1 | 24.000 | 300 | 215 | 9 | 263 | 554 | 46 | 340 | 1.88e-23 | 102 |
| Msa0404940 | AT5G64730.1 | 24.585 | 301 | 219 | 6 | 256 | 555 | 4 | 297 | 1.38e-21 | 95.9 |
| Msa0404940 | AT5G25150.1 | 39.496 | 119 | 69 | 1 | 268 | 386 | 458 | 573 | 2.65e-19 | 92.4 |
| Msa0404940 | AT5G25150.1 | 23.182 | 220 | 158 | 5 | 261 | 475 | 409 | 622 | 9.27e-14 | 74.7 |
| Msa0404940 | AT5G25150.2 | 39.496 | 119 | 69 | 1 | 268 | 386 | 458 | 573 | 3.06e-19 | 92.0 |
| Msa0404940 | AT5G25150.2 | 23.182 | 220 | 158 | 5 | 261 | 475 | 409 | 622 | 1.20e-13 | 74.3 |
| Msa0404940 | AT1G71840.1 | 24.149 | 323 | 220 | 8 | 262 | 574 | 62 | 369 | 2.21e-16 | 82.0 |
| Msa0404940 | AT5G67320.1 | 24.561 | 342 | 225 | 12 | 256 | 573 | 251 | 583 | 3.32e-16 | 82.4 |
| Msa0404940 | AT2G41500.1 | 30.645 | 124 | 83 | 1 | 263 | 386 | 332 | 452 | 4.10e-14 | 75.9 |
| Msa0404940 | AT2G41500.1 | 23.232 | 297 | 178 | 6 | 260 | 555 | 288 | 535 | 3.90e-12 | 69.3 |
| Msa0404940 | AT2G41500.2 | 30.645 | 124 | 83 | 1 | 263 | 386 | 332 | 452 | 4.10e-14 | 75.9 |
| Msa0404940 | AT2G41500.2 | 23.232 | 297 | 178 | 6 | 260 | 555 | 288 | 535 | 3.90e-12 | 69.3 |
| Msa0404940 | AT1G73720.1 | 19.847 | 524 | 372 | 16 | 61 | 555 | 5 | 509 | 1.04e-13 | 74.3 |
| Msa0404940 | AT5G60940.1 | 19.792 | 384 | 269 | 11 | 208 | 555 | 45 | 425 | 2.06e-13 | 72.8 |
| Msa0404940 | AT1G10580.1 | 21.725 | 313 | 229 | 10 | 252 | 555 | 267 | 572 | 2.91e-13 | 73.2 |
| Msa0404940 | AT5G60940.2 | 20.795 | 327 | 235 | 10 | 250 | 555 | 10 | 333 | 1.80e-12 | 69.3 |
| Msa0404940 | AT5G52820.1 | 21.379 | 435 | 244 | 15 | 206 | 555 | 50 | 471 | 2.60e-12 | 69.7 |
| Msa0404940 | AT5G08390.1 | 24.359 | 156 | 115 | 1 | 260 | 415 | 91 | 243 | 8.24e-12 | 68.9 |
| Msa0404940 | AT5G54520.1 | 24.444 | 315 | 221 | 8 | 255 | 555 | 145 | 456 | 1.05e-11 | 67.8 |
| Msa0404940 | AT5G23430.1 | 23.718 | 156 | 116 | 1 | 260 | 415 | 91 | 243 | 4.87e-11 | 66.2 |
| Msa0404940 | AT5G23430.3 | 23.718 | 156 | 116 | 1 | 260 | 415 | 91 | 243 | 4.91e-11 | 66.2 |
| Msa0404940 | AT5G23430.2 | 23.718 | 156 | 116 | 1 | 260 | 415 | 91 | 243 | 4.91e-11 | 66.2 |
Find 162 sgRNAs with CRISPR-Local
Find 562 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTGGAAAATTGTTATATA+TGG | 0.117089 | 3_2:-38251279 | Msa0404940:five_prime_UTR |
| AAGCATCTTGTTGCAAAATT+AGG | 0.127762 | 3_2:+38250559 | None:intergenic |
| CAGTCTCAAAATAACCTTTA+TGG | 0.135341 | 3_2:-38244070 | Msa0404940:three_prime_UTR |
| TGTGGAAAGTATATACTTTC+TGG | 0.200681 | 3_2:-38245311 | Msa0404940:CDS |
| ATTTGTTCCTTCACTACTTT+TGG | 0.218711 | 3_2:-38251335 | Msa0404940:five_prime_UTR |
| AACCCTCAAGATTTCTGATT+TGG | 0.228555 | 3_2:-38245219 | Msa0404940:CDS |
| GATGCGTTGCCCGGTCATTC+TGG | 0.234741 | 3_2:-38244375 | Msa0404940:CDS |
| TATGGTTCATTTAAGCGTTT+TGG | 0.266229 | 3_2:-38244052 | Msa0404940:three_prime_UTR |
| ATGACCGGACAGTCCGGATA+TGG | 0.290731 | 3_2:-38244293 | Msa0404940:CDS |
| AAACAGATGAAACAGATTTC+TGG | 0.290772 | 3_2:+38245471 | None:intergenic |
| AATCTGTTTCATCTGTTTCC+TGG | 0.293813 | 3_2:-38245466 | Msa0404940:CDS |
| AGCATCTTGTTGCAAAATTA+GGG | 0.298828 | 3_2:+38250560 | None:intergenic |
| AAAATAAGAAAGAAAGAAAT+TGG | 0.314171 | 3_2:-38251926 | Msa0404940:five_prime_UTR |
| TATTCCAAAGATGTATTTCC+TGG | 0.324628 | 3_2:+38245033 | None:intergenic |
| ATTTCTGATTTGGAAATAAC+AGG | 0.332254 | 3_2:-38245209 | Msa0404940:CDS |
| AACGAAGTTGTTGGTTCAAA+AGG | 0.341842 | 3_2:-38251086 | Msa0404940:CDS |
| CTAACCTGTAATGTTCTAGA+TGG | 0.343914 | 3_2:+38250465 | None:intergenic |
| TGAACCAGGAAATACATCTT+TGG | 0.345081 | 3_2:-38245037 | Msa0404940:CDS |
| CGTTGTCCCCTTCAGATGAT+AGG | 0.345670 | 3_2:+38251105 | None:intergenic |
| GTACGCACGTTGAATAAAAT+TGG | 0.352238 | 3_2:-38250897 | Msa0404940:CDS |
| TCCGACCAATGTGGTTCTTC+TGG | 0.354530 | 3_2:-38250696 | Msa0404940:CDS |
| TCTTCTGTGGAGCGTGTTGT+AGG | 0.357737 | 3_2:-38251155 | Msa0404940:CDS |
| GTAAGAAGCTCTTGGCCATT+AGG | 0.359812 | 3_2:+38245440 | None:intergenic |
| ATGATCGAACTGCAATCATT+TGG | 0.365648 | 3_2:-38246759 | Msa0404940:CDS |
| GTTTATGAAAAGAATGGTTC+TGG | 0.368635 | 3_2:-38245359 | Msa0404940:CDS |
| TCTTGATGGGGATAAGGTTA+TGG | 0.373088 | 3_2:-38250808 | Msa0404940:CDS |
| ACTGGAAAATTGTTATATAT+GGG | 0.373532 | 3_2:-38251278 | Msa0404940:five_prime_UTR |
| GATACCATCTAGAACATTAC+AGG | 0.375880 | 3_2:-38250469 | Msa0404940:intron |
| GAAGGAGATCTTAAGCTTGT+TGG | 0.378421 | 3_2:-38245008 | Msa0404940:CDS |
| ATGCCCATGACGATGAAGTA+TGG | 0.396463 | 3_2:-38246828 | Msa0404940:CDS |
| TGAGCTTCTTGATGGGGATA+AGG | 0.399511 | 3_2:-38250814 | Msa0404940:CDS |
| TCTGTTTCCTGGAGTCCTAA+TGG | 0.400766 | 3_2:-38245455 | Msa0404940:CDS |
| AAGGAGATCTTAAGCTTGTT+GGG | 0.403127 | 3_2:-38245007 | Msa0404940:CDS |
| TACATATGGCACAGAAGCTC+AGG | 0.404511 | 3_2:-38244408 | Msa0404940:CDS |
| AACGCTTAAATGAACCATAA+AGG | 0.405942 | 3_2:+38244056 | None:intergenic |
| ATGTTTGCTAGGTTTACATA+TGG | 0.410206 | 3_2:-38244422 | Msa0404940:intron |
| GTTATTAGATCTTGCTTTGG+AGG | 0.410907 | 3_2:-38244954 | Msa0404940:CDS |
| GCACAGAAGCTCAGGGGACT+TGG | 0.415521 | 3_2:-38244400 | Msa0404940:CDS |
| TTTGTTATTAGATCTTGCTT+TGG | 0.415973 | 3_2:-38244957 | Msa0404940:CDS |
| AAAAGATAGCAGATTCTTGT+TGG | 0.417178 | 3_2:-38245069 | Msa0404940:CDS |
| TGATCGAACTGCAATCATTT+GGG | 0.424105 | 3_2:-38246758 | Msa0404940:CDS |
| AGCAAGATCTAATAACAAAC+CGG | 0.429270 | 3_2:+38244961 | None:intergenic |
| ATACATCTTTGGAATATAGA+AGG | 0.440068 | 3_2:-38245026 | Msa0404940:CDS |
| CGAACGAAATTGTTGTGTAA+AGG | 0.440077 | 3_2:-38251203 | Msa0404940:CDS |
| ACGGTCATCACTGCAATTGT+AGG | 0.443034 | 3_2:-38244221 | Msa0404940:CDS |
| GAAACCATGCACAGGAGATC+AGG | 0.443605 | 3_2:+38245336 | None:intergenic |
| ACCGATCGCTCATCGGATTC+CGG | 0.447639 | 3_2:-38251891 | Msa0404940:five_prime_UTR |
| CTGCAAGTTTATGAAAAGAA+TGG | 0.450397 | 3_2:-38245365 | Msa0404940:CDS |
| TGACCGGACAGTCCGGATAT+GGG | 0.451392 | 3_2:-38244292 | Msa0404940:CDS |
| GTTTCACAACTCATTGGATA+AGG | 0.458365 | 3_2:-38250532 | Msa0404940:CDS |
| CTCTTGGCCATTAGGACTCC+AGG | 0.461420 | 3_2:+38245448 | None:intergenic |
| ATTCCAGCTCACACAGTTAA+CGG | 0.464206 | 3_2:+38244350 | None:intergenic |
| AGCAGGTACTTGATGGTGAT+TGG | 0.465527 | 3_2:-38250929 | Msa0404940:CDS |
| AGATGTTCCAATCTCTTCTC+AGG | 0.467671 | 3_2:+38250594 | None:intergenic |
| CTTCTATAGGTAGACACAAA+TGG | 0.468900 | 3_2:-38245527 | Msa0404940:intron |
| AGGATCTTCGAGTGACTTGA+TGG | 0.472498 | 3_2:-38251135 | Msa0404940:CDS |
| GTTGTCCCCTTCAGATGATA+GGG | 0.475139 | 3_2:+38251106 | None:intergenic |
| TTGCTCGTTTCACAACTCAT+TGG | 0.475980 | 3_2:-38250538 | Msa0404940:CDS |
| GGAGGAAGCTGTTAGGCGTT+GGG | 0.478080 | 3_2:-38245408 | Msa0404940:CDS |
| GTGGAGTGGAGGAAGCTGTT+AGG | 0.478153 | 3_2:-38245415 | Msa0404940:CDS |
| TTATTAGATCTTGCTTTGGA+GGG | 0.480774 | 3_2:-38244953 | Msa0404940:CDS |
| GATATGGGGCTTAAAGTGTC+TGG | 0.481401 | 3_2:-38244277 | Msa0404940:CDS |
| CGGTCATCACTGCAATTGTA+GGG | 0.482058 | 3_2:-38244220 | Msa0404940:CDS |
| AAGTATATACTTTCTGGCCT+CGG | 0.485551 | 3_2:-38245305 | Msa0404940:CDS |
| AATGATACCTGAGAAGAGAT+TGG | 0.486595 | 3_2:-38250601 | Msa0404940:CDS |
| TTTCCAAATCAGAAATCTTG+AGG | 0.489920 | 3_2:+38245216 | None:intergenic |
| ACGGGAAAGAAGTTGAGTCT+TGG | 0.492609 | 3_2:-38245253 | Msa0404940:CDS |
| AGCCCCATATCCGGACTGTC+CGG | 0.492790 | 3_2:+38244289 | None:intergenic |
| CTTGCTGAGGCCAACATGTG+GGG | 0.492988 | 3_2:+38244318 | None:intergenic |
| TAGGCGTTGGGATGTCAGTA+CGG | 0.493450 | 3_2:-38245396 | Msa0404940:CDS |
| TCTCAGGTATCATTACAGTC+GGG | 0.493837 | 3_2:+38250610 | None:intergenic |
| GAAAACCTAGAGGAGGAGTC+TGG | 0.494898 | 3_2:-38250990 | Msa0404940:CDS |
| TTTATGCAGCAGGTACTTGA+TGG | 0.495020 | 3_2:-38250936 | Msa0404940:CDS |
| CTGGCCTGATCTCCTGTGCA+TGG | 0.495260 | 3_2:-38245340 | Msa0404940:CDS |
| GAAGGGGACAACGAAGTTGT+TGG | 0.495553 | 3_2:-38251095 | Msa0404940:CDS |
| GACTTGGTAGATGCGTTGCC+CGG | 0.495687 | 3_2:-38244384 | Msa0404940:CDS |
| GACACTTTAAGCCCCATATC+CGG | 0.496823 | 3_2:+38244280 | None:intergenic |
| TTCCAAATCAGAAATCTTGA+GGG | 0.500940 | 3_2:+38245217 | None:intergenic |
| CTCCACATGTAAGAAGCTCT+TGG | 0.503254 | 3_2:+38245432 | None:intergenic |
| TGGCCTCAGCAAGCGATGAC+CGG | 0.503603 | 3_2:-38244308 | Msa0404940:CDS |
| TTCTCAGGTATCATTACAGT+CGG | 0.505834 | 3_2:+38250609 | None:intergenic |
| TCCTGTGCATGGTTTCCTTG+TGG | 0.507321 | 3_2:-38245329 | Msa0404940:CDS |
| TGGAGGAAGCTGTTAGGCGT+TGG | 0.508032 | 3_2:-38245409 | Msa0404940:CDS |
| GCAGGTACTTGATGGTGATT+GGG | 0.509356 | 3_2:-38250928 | Msa0404940:CDS |
| CGCTTGCTGAGGCCAACATG+TGG | 0.509685 | 3_2:+38244316 | None:intergenic |
| ACGAAGTTGTTGGTTCAAAA+GGG | 0.512756 | 3_2:-38251085 | Msa0404940:CDS |
| GCTTGCTGAGGCCAACATGT+GGG | 0.517243 | 3_2:+38244317 | None:intergenic |
| AAGCAATCGTTTATTGCTAG+TGG | 0.517938 | 3_2:-38244927 | Msa0404940:CDS |
| GTGTCTACTTGTAACTTGTA+AGG | 0.518013 | 3_2:+38244123 | None:intergenic |
| CAAGCGATGACCGGACAGTC+CGG | 0.518133 | 3_2:-38244299 | Msa0404940:CDS |
| GAGGACTCGCTTGAAACTGC+TGG | 0.526102 | 3_2:-38250655 | Msa0404940:CDS |
| CTCTACCACCGATCGCTCAT+CGG | 0.530084 | 3_2:-38251898 | Msa0404940:five_prime_UTR |
| TTTGCATGTGGGAATTAGAC+GGG | 0.530130 | 3_2:-38245271 | Msa0404940:CDS |
| GTTGGTTAATCTTCTGAACC+AGG | 0.530280 | 3_2:-38245051 | Msa0404940:CDS |
| ATTTGGAAATAACAGGTGAC+GGG | 0.531109 | 3_2:-38245202 | Msa0404940:CDS |
| GATTTGGAAATAACAGGTGA+CGG | 0.534740 | 3_2:-38245203 | Msa0404940:CDS |
| ACGAAGGCATTGTATTCTCT+CGG | 0.535490 | 3_2:-38251029 | Msa0404940:CDS |
| CTCTAACGGTTCATCTTCTG+TGG | 0.542353 | 3_2:-38251168 | Msa0404940:CDS |
| AAACCATACTTCATCGTCAT+GGG | 0.547234 | 3_2:+38246825 | None:intergenic |
| ATTTGCATGTGGGAATTAGA+CGG | 0.554899 | 3_2:-38245272 | Msa0404940:CDS |
| GCCGGAATCCGATGAGCGAT+CGG | 0.554994 | 3_2:+38251890 | None:intergenic |
| ACCAGAAGAACCACATTGGT+CGG | 0.557604 | 3_2:+38250695 | None:intergenic |
| TACTCAAATGCCTACAGCAA+TGG | 0.558729 | 3_2:-38244246 | Msa0404940:CDS |
| GTTAACGGCTCCAGAATGAC+CGG | 0.560282 | 3_2:+38244365 | None:intergenic |
| TCTATGAAGCATAAATTATG+TGG | 0.562604 | 3_2:-38245497 | Msa0404940:CDS |
| GAGCCGTTAACTGTGTGAGC+TGG | 0.567883 | 3_2:-38244353 | Msa0404940:CDS |
| ATATGCCAGACTCCTCCTCT+AGG | 0.569079 | 3_2:+38250985 | None:intergenic |
| TAGTGGAAGTGAGGATTCAC+AGG | 0.569174 | 3_2:-38244910 | Msa0404940:intron |
| TTGTAGGGGAACTTAGATGA+AGG | 0.569237 | 3_2:-38244205 | Msa0404940:exon |
| GCTCGGCCCCTATCATCTGA+AGG | 0.573835 | 3_2:-38251113 | Msa0404940:CDS |
| TGGATGCATTGAAGACATTG+AGG | 0.574890 | 3_2:-38250788 | Msa0404940:CDS |
| CTCGGCCCCTATCATCTGAA+GGG | 0.575430 | 3_2:-38251112 | Msa0404940:CDS |
| CTTCGAGTGACTTGATGGCT+CGG | 0.576791 | 3_2:-38251130 | Msa0404940:CDS |
| GGTAAATGTGTTTATGCAGC+AGG | 0.577455 | 3_2:-38250946 | Msa0404940:CDS |
| AGGCGTTGGGATGTCAGTAC+GGG | 0.578210 | 3_2:-38245395 | Msa0404940:CDS |
| GGCCAAGAGCTTCTTACATG+TGG | 0.581552 | 3_2:-38245434 | Msa0404940:CDS |
| TGTCCGGTCATCGCTTGCTG+AGG | 0.582564 | 3_2:+38244305 | None:intergenic |
| CTCAGGTATCATTACAGTCG+GGG | 0.583773 | 3_2:+38250611 | None:intergenic |
| GTAACTTGTAAGGACAGTAA+AGG | 0.585436 | 3_2:+38244133 | None:intergenic |
| ATAAAAGTCATAGACGCTCC+CGG | 0.592625 | 3_2:-38244980 | Msa0404940:CDS |
| AATGCCTCCAAAAGTAGTGA+AGG | 0.593813 | 3_2:+38251328 | None:intergenic |
| AGTTCGATCATTTGATGCTG+TGG | 0.594560 | 3_2:+38246771 | None:intergenic |
| GTTTATTGCTAGTGGAAGTG+AGG | 0.595056 | 3_2:-38244919 | Msa0404940:CDS |
| GAAGAACCACATTGGTCGGA+TGG | 0.599754 | 3_2:+38250699 | None:intergenic |
| AAAAGCGATCTGAAGTTCGC+CGG | 0.603308 | 3_2:+38251872 | None:intergenic |
| GCTTCTTACATGTGGAGTGG+AGG | 0.605122 | 3_2:-38245426 | Msa0404940:CDS |
| AAATTGTTATATATGGGCTG+AGG | 0.607076 | 3_2:-38251272 | Msa0404940:five_prime_UTR |
| GACCGGACAGTCCGGATATG+GGG | 0.607301 | 3_2:-38244291 | Msa0404940:CDS |
| ATAAGAAAGAAAGAAATTGG+CGG | 0.607653 | 3_2:-38251923 | Msa0404940:five_prime_UTR |
| GTGACAAAAGCATTTGCATG+TGG | 0.612110 | 3_2:-38245283 | Msa0404940:CDS |
| TGACAAAAGCATTTGCATGT+GGG | 0.613809 | 3_2:-38245282 | Msa0404940:CDS |
| CAAACCATACTTCATCGTCA+TGG | 0.614532 | 3_2:+38246824 | None:intergenic |
| TCCACAAGGAAACCATGCAC+AGG | 0.616331 | 3_2:+38245328 | None:intergenic |
| AGAGCTTCTTACATGTGGAG+TGG | 0.628710 | 3_2:-38245429 | Msa0404940:CDS |
| ACATATGGCACAGAAGCTCA+GGG | 0.629533 | 3_2:-38244407 | Msa0404940:CDS |
| TTGCTGAGGCCAACATGTGG+GGG | 0.630797 | 3_2:+38244319 | None:intergenic |
| GCTCTTCAATAAAGAAACGA+AGG | 0.630901 | 3_2:-38245141 | Msa0404940:CDS |
| AAAGAAGTTGAGTCTTGGAA+AGG | 0.635577 | 3_2:-38245248 | Msa0404940:CDS |
| GGATTAAACAGTCTCTCTAA+CGG | 0.639200 | 3_2:-38251182 | Msa0404940:CDS |
| TTGTCCCCTTCAGATGATAG+GGG | 0.640840 | 3_2:+38251107 | None:intergenic |
| GGTACTTGATGGTGATTGGG+AGG | 0.643190 | 3_2:-38250925 | Msa0404940:CDS |
| ATGACCGTTGCCATTGCTGT+AGG | 0.644794 | 3_2:+38244236 | None:intergenic |
| GCAAGATCTAATAACAAACC+GGG | 0.647814 | 3_2:+38244962 | None:intergenic |
| AATGCCTACAGCAATGGCAA+CGG | 0.648036 | 3_2:-38244240 | Msa0404940:CDS |
| GACTCGCTTGAAACTGCTGG+AGG | 0.656969 | 3_2:-38250652 | Msa0404940:CDS |
| TCGGCCCCTATCATCTGAAG+GGG | 0.658928 | 3_2:-38251111 | Msa0404940:CDS |
| GACCGGGGAAAACCTAGAGG+AGG | 0.668456 | 3_2:-38250997 | Msa0404940:CDS |
| GGAATCCGATGAGCGATCGG+TGG | 0.670652 | 3_2:+38251893 | None:intergenic |
| TTGTCACCATCCGACCAATG+TGG | 0.673046 | 3_2:-38250705 | Msa0404940:CDS |
| CATATCGTTGAATTCGTCTG+TGG | 0.675488 | 3_2:-38250967 | Msa0404940:CDS |
| CTCGACCAGAAGAACCACAT+TGG | 0.680833 | 3_2:+38250691 | None:intergenic |
| TCGAACTGCAATCATTTGGG+AGG | 0.684790 | 3_2:-38246755 | Msa0404940:intron |
| TCAGGTATCATTACAGTCGG+GGG | 0.685221 | 3_2:+38250612 | None:intergenic |
| TTAACGGCTCCAGAATGACC+GGG | 0.689998 | 3_2:+38244366 | None:intergenic |
| CTATAGGTAGACACAAATGG+TGG | 0.695509 | 3_2:-38245524 | Msa0404940:intron |
| GGTCATCACTGCAATTGTAG+GGG | 0.702846 | 3_2:-38244219 | Msa0404940:CDS |
| GAAAGTATATACTTTCCACA+AGG | 0.711786 | 3_2:+38245314 | None:intergenic |
| AAAGACCGGGGAAAACCTAG+AGG | 0.721392 | 3_2:-38251000 | Msa0404940:CDS |
| GTTTGTAAGGATAATCACGA+AGG | 0.722929 | 3_2:-38251045 | Msa0404940:CDS |
| CATATGGCACAGAAGCTCAG+GGG | 0.737243 | 3_2:-38244406 | Msa0404940:CDS |
| TTTGGAAATAACAGGTGACG+GGG | 0.738612 | 3_2:-38245201 | Msa0404940:CDS |
| TTATATTCAGATCATCACTG+TGG | 0.742830 | 3_2:-38250501 | Msa0404940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTAAAATTTGTTATTTAATT+AGG | + | chr3_2:38246808-38246827 | None:intergenic | 10.0% |
| !!! | TTAGTTAATTTTATAGATTA+AGG | - | chr3_2:38248102-38248121 | Msa0404940:intron | 10.0% |
| !! | AAAATAAGAAAGAAAGAAAT+TGG | - | chr3_2:38244073-38244092 | Msa0404940:three_prime_UTR | 15.0% |
| !!! | TTTTTGAGTTATAAGTTTAA+TGG | - | chr3_2:38244432-38244451 | Msa0404940:intron | 15.0% |
| !!! | GATTTTGTAAATATTTAATG+CGG | - | chr3_2:38246222-38246241 | Msa0404940:intron | 15.0% |
| !! | TAAAGTTGTAGAATAAATTA+TGG | + | chr3_2:38246493-38246512 | None:intergenic | 15.0% |
| !! | TAGAAAAAATAAAACATACA+TGG | - | chr3_2:38248315-38248334 | Msa0404940:intron | 15.0% |
| !! | TAAATGTTATAATAGATTTG+TGG | - | chr3_2:38248493-38248512 | Msa0404940:intron | 15.0% |
| !!! | AATTTTGATATGATTCTAAA+TGG | - | chr3_2:38248627-38248646 | Msa0404940:intron | 15.0% |
| !!! | ATTTTGATATGATTCTAAAT+GGG | - | chr3_2:38248628-38248647 | Msa0404940:intron | 15.0% |
| !!! | AATTTTTACTTTATTTGGAA+TGG | - | chr3_2:38250082-38250101 | Msa0404940:intron | 15.0% |
| !! | AAAACATAATAACTATCAAA+AGG | + | chr3_2:38250238-38250257 | None:intergenic | 15.0% |
| !!! | ATTTTGAATATTAAACCATA+AGG | - | chr3_2:38251382-38251401 | Msa0404940:intron | 15.0% |
| !!! | CTTTGAAAATTATAAATTCT+TGG | + | chr3_2:38251459-38251478 | None:intergenic | 15.0% |
| !! | ATAGAATTTATAGAAATTGT+AGG | + | chr3_2:38251528-38251547 | None:intergenic | 15.0% |
| !!! | TCTTTCTTTCTTATTTTCTT+TGG | + | chr3_2:38244070-38244089 | None:intergenic | 20.0% |
| !!! | TCCATTTTCTCTATATTATA+TGG | - | chr3_2:38244592-38244611 | Msa0404940:intron | 20.0% |
| !! | ACCATATAATATAGAGAAAA+TGG | + | chr3_2:38244596-38244615 | None:intergenic | 20.0% |
| !! | TACTGGAAAATTGTTATATA+TGG | - | chr3_2:38244720-38244739 | Msa0404940:intron | 20.0% |
| !! | ACTGGAAAATTGTTATATAT+GGG | - | chr3_2:38244721-38244740 | Msa0404940:intron | 20.0% |
| !! | AAAAGGGATCATAAAAAAAA+AGG | - | chr3_2:38244930-38244949 | Msa0404940:CDS | 20.0% |
| !! | TAAAAAAAAAGGAGTTTGTA+AGG | - | chr3_2:38244941-38244960 | Msa0404940:CDS | 20.0% |
| !! | TAGATGTACTAAATTTCTAA+AGG | - | chr3_2:38246183-38246202 | Msa0404940:intron | 20.0% |
| !!! | TTTGGTCTTTTATTATTTAC+AGG | + | chr3_2:38246261-38246280 | None:intergenic | 20.0% |
| !! | TGAAACATGTGATTAAATTT+GGG | + | chr3_2:38246713-38246732 | None:intergenic | 20.0% |
| !! | ATATTTATTTATGTACTCTC+TGG | + | chr3_2:38247059-38247078 | None:intergenic | 20.0% |
| !!! | ATATTATCTTGTTTTCTAAC+TGG | - | chr3_2:38247075-38247094 | Msa0404940:intron | 20.0% |
| !!! | ATGTTAATTTTGAGTTCAAT+AGG | - | chr3_2:38247522-38247541 | Msa0404940:intron | 20.0% |
| !! | TATAAATAGAACATAGTGTT+AGG | - | chr3_2:38247566-38247585 | Msa0404940:intron | 20.0% |
| !!! | ATATCTTTTACTCTTTGTTT+TGG | - | chr3_2:38247844-38247863 | Msa0404940:intron | 20.0% |
| !!! | TATCTTTTACTCTTTGTTTT+GGG | - | chr3_2:38247845-38247864 | Msa0404940:intron | 20.0% |
| !! | TAATATAGTATTCTTTACCT+TGG | - | chr3_2:38248137-38248156 | Msa0404940:intron | 20.0% |
| !! | AAGTTTCGAAAAAAATAGAT+GGG | - | chr3_2:38248237-38248256 | Msa0404940:intron | 20.0% |
| !! | TATGAATAACAACTTACAAT+TGG | + | chr3_2:38249332-38249351 | None:intergenic | 20.0% |
| !! | AACATGTATTACATCAATTT+GGG | + | chr3_2:38249358-38249377 | None:intergenic | 20.0% |
| !!! | TTTGTTATTGATAGTTTACA+TGG | + | chr3_2:38249699-38249718 | None:intergenic | 20.0% |
| !! | AAAATGTTAGAATATGTTGT+GGG | - | chr3_2:38250105-38250124 | Msa0404940:intron | 20.0% |
| !!! | GTTTCACATATTTTGTTATT+TGG | - | chr3_2:38250444-38250463 | Msa0404940:intron | 20.0% |
| !! | ATATTTCAAATTAGTCCTTA+TGG | + | chr3_2:38251400-38251419 | None:intergenic | 20.0% |
| !!! | TAATTTGAAATATTTGCACA+CGG | - | chr3_2:38251407-38251426 | Msa0404940:intron | 20.0% |
| ! | ATAAGAAAGAAAGAAATTGG+CGG | - | chr3_2:38244076-38244095 | Msa0404940:three_prime_UTR | 25.0% |
| !! | CGATTCTTATTCTTTTCTTT+CGG | - | chr3_2:38244204-38244223 | Msa0404940:exon | 25.0% |
| ! | TTCAATTTCTGAGTATTATG+TGG | - | chr3_2:38244235-38244254 | Msa0404940:CDS | 25.0% |
| !!! | GATTATTTTTTGACGTAGTT+AGG | - | chr3_2:38244285-38244304 | Msa0404940:CDS | 25.0% |
| ! | AGCATTTCAAAAACTTGTAT+GGG | + | chr3_2:38244412-38244431 | None:intergenic | 25.0% |
| ! | AAGCATTTCAAAAACTTGTA+TGG | + | chr3_2:38244413-38244432 | None:intergenic | 25.0% |
| ! | TCCAATTAGAATTGTGAATT+GGG | + | chr3_2:38244536-38244555 | None:intergenic | 25.0% |
| !!! | GTTGTTTTTTACTCTTTTAC+TGG | - | chr3_2:38244703-38244722 | Msa0404940:intron | 25.0% |
| !!! | AAATTTTTTGAGCTTCTTGA+TGG | - | chr3_2:38245177-38245196 | Msa0404940:CDS | 25.0% |
| !!! | AATTTTTTGAGCTTCTTGAT+GGG | - | chr3_2:38245178-38245197 | Msa0404940:CDS | 25.0% |
| ! | CATTATTCAATACATATCAC+TGG | + | chr3_2:38245722-38245741 | None:intergenic | 25.0% |
| ! | CAGTGATATGTATTGAATAA+TGG | - | chr3_2:38245720-38245739 | Msa0404940:intron | 25.0% |
| ! | ATGAATTAAACTGCAATAGA+AGG | + | chr3_2:38246116-38246135 | None:intergenic | 25.0% |
| ! | TACATCTATCAAATGTAACA+AGG | + | chr3_2:38246171-38246190 | None:intergenic | 25.0% |
| ! | CTGAAACATGTGATTAAATT+TGG | + | chr3_2:38246714-38246733 | None:intergenic | 25.0% |
| ! | AACTATATCTCTATCTCAAT+TGG | + | chr3_2:38246762-38246781 | None:intergenic | 25.0% |
| ! | TATTAAGAATCATAGTCAAG+TGG | + | chr3_2:38247001-38247020 | None:intergenic | 25.0% |
| ! | TAATGTCCTTTAATTAAGGA+TGG | + | chr3_2:38247179-38247198 | None:intergenic | 25.0% |
| !! | CTGATAATGTCCTTTAATTA+AGG | + | chr3_2:38247183-38247202 | None:intergenic | 25.0% |
| !! | AACCATTAGAAGTATAGAAA+TGG | - | chr3_2:38247295-38247314 | Msa0404940:intron | 25.0% |
| !!! | TATAGAAATGGACTAGAATT+TGG | - | chr3_2:38247307-38247326 | Msa0404940:intron | 25.0% |
| ! | GGAAAATGTTAGAAATTTAG+TGG | - | chr3_2:38247336-38247355 | Msa0404940:intron | 25.0% |
| !!! | TTAATTTTGAGTTCAATAGG+AGG | - | chr3_2:38247525-38247544 | Msa0404940:intron | 25.0% |
| !!! | TCTTTTTAGTTAGAAACTGA+TGG | - | chr3_2:38247720-38247739 | Msa0404940:intron | 25.0% |
| !!! | CTTTTTAGTTAGAAACTGAT+GGG | - | chr3_2:38247721-38247740 | Msa0404940:intron | 25.0% |
| ! | ATGAATAGTTACAAAAGAGT+TGG | - | chr3_2:38247880-38247899 | Msa0404940:intron | 25.0% |
| !!! | GTAAGATTTTAGAAGGAAAA+AGG | - | chr3_2:38247926-38247945 | Msa0404940:intron | 25.0% |
| !! | AATTCAATTCGATTTTATGC+TGG | - | chr3_2:38248041-38248060 | Msa0404940:intron | 25.0% |
| !! | ATTCAATTCGATTTTATGCT+GGG | - | chr3_2:38248042-38248061 | Msa0404940:intron | 25.0% |
| ! | CAAATTATTTGTAGAAAGCA+TGG | + | chr3_2:38248202-38248221 | None:intergenic | 25.0% |
| ! | CATGCTTTCTACAAATAATT+TGG | - | chr3_2:38248200-38248219 | Msa0404940:intron | 25.0% |
| !!! | ACAAATAATTTGGTTCTAGT+TGG | - | chr3_2:38248210-38248229 | Msa0404940:intron | 25.0% |
| ! | CAAGTTTCGAAAAAAATAGA+TGG | - | chr3_2:38248236-38248255 | Msa0404940:intron | 25.0% |
| ! | ACAAATTGATAGGAAATGAA+GGG | - | chr3_2:38248361-38248380 | Msa0404940:intron | 25.0% |
| ! | TGTTATAATAGATTTGTGGA+TGG | - | chr3_2:38248497-38248516 | Msa0404940:intron | 25.0% |
| !!! | ATTCTAAATGGGTTAACATA+TGG | - | chr3_2:38248639-38248658 | Msa0404940:intron | 25.0% |
| !! | TTTGTACAATTTTCACATGA+TGG | - | chr3_2:38249194-38249213 | Msa0404940:intron | 25.0% |
| !! | TTGTACAATTTTCACATGAT+GGG | - | chr3_2:38249195-38249214 | Msa0404940:intron | 25.0% |
| ! | CAAGCATATATTTCATCATT+AGG | + | chr3_2:38249275-38249294 | None:intergenic | 25.0% |
| ! | GAACATGTATTACATCAATT+TGG | + | chr3_2:38249359-38249378 | None:intergenic | 25.0% |
| ! | AACATAGAATTGAACAATGT+TGG | + | chr3_2:38249437-38249456 | None:intergenic | 25.0% |
| !! | TGTTCAATTCTATGTTACTT+TGG | - | chr3_2:38249441-38249460 | Msa0404940:intron | 25.0% |
| ! | TTAATTTAACAACCCAAACT+TGG | + | chr3_2:38249551-38249570 | None:intergenic | 25.0% |
| !!! | TAGAAATGTTTTAATCATCC+TGG | - | chr3_2:38249665-38249684 | Msa0404940:intron | 25.0% |
| ! | TATCAATATTTGCCACTATT+AGG | + | chr3_2:38249794-38249813 | None:intergenic | 25.0% |
| !!! | TTAACTTGTATTTGATCTAC+TGG | + | chr3_2:38249859-38249878 | None:intergenic | 25.0% |
| ! | AAAAAAGTGGAATTGAACAA+TGG | - | chr3_2:38249923-38249942 | Msa0404940:intron | 25.0% |
| ! | GAAAATGTTAGAATATGTTG+TGG | - | chr3_2:38250104-38250123 | Msa0404940:intron | 25.0% |
| ! | TGTAAGCTGATCAATATTTA+CGG | + | chr3_2:38250389-38250408 | None:intergenic | 25.0% |
| ! | TTACTTAATGCTATGATGTT+GGG | - | chr3_2:38250422-38250441 | Msa0404940:intron | 25.0% |
| ! | TCTATGAAGCATAAATTATG+TGG | - | chr3_2:38250502-38250521 | Msa0404940:CDS | 25.0% |
| !!! | ATTTCTGATTTGGAAATAAC+AGG | - | chr3_2:38250790-38250809 | Msa0404940:CDS | 25.0% |
| !!! | ATACATCTTTGGAATATAGA+AGG | - | chr3_2:38250973-38250992 | Msa0404940:CDS | 25.0% |
| !!! | TTTGTTATTAGATCTTGCTT+TGG | - | chr3_2:38251042-38251061 | Msa0404940:CDS | 25.0% |
| !!! | TCATGTTATTTTTGCTTTTG+AGG | - | chr3_2:38251143-38251162 | Msa0404940:CDS | 25.0% |
| !! | TTGTCTGTTGACTATATTAA+AGG | + | chr3_2:38251172-38251191 | None:intergenic | 25.0% |
| ! | TGAAATTGACCAAAATGTTA+TGG | - | chr3_2:38251252-38251271 | Msa0404940:exon | 25.0% |
| ! | TGGAAATCCAATAAACTAAA+TGG | + | chr3_2:38251558-38251577 | None:intergenic | 25.0% |
| ! | CACAATAGCAATGATAAAAA+TGG | + | chr3_2:38251836-38251855 | None:intergenic | 25.0% |
| ! | CTAAAAAGTCATGATCAAAA+TGG | + | chr3_2:38251909-38251928 | None:intergenic | 25.0% |
| CACATAGAAAAATCAGTTTC+AGG | - | chr3_2:38244044-38244063 | Msa0404940:three_prime_UTR | 30.0% | |
| GCATTTCAAAAACTTGTATG+GGG | + | chr3_2:38244411-38244430 | None:intergenic | 30.0% | |
| !! | GGGTAGTTATTTTCAAAAAG+CGG | + | chr3_2:38244516-38244535 | None:intergenic | 30.0% |
| ACCCAATTCACAATTCTAAT+TGG | - | chr3_2:38244532-38244551 | Msa0404940:intron | 30.0% | |
| GTCCAATTAGAATTGTGAAT+TGG | + | chr3_2:38244537-38244556 | None:intergenic | 30.0% | |
| ! | ATTTGTTCCTTCACTACTTT+TGG | - | chr3_2:38244664-38244683 | Msa0404940:intron | 30.0% |
| ! | AAATTGTTATATATGGGCTG+AGG | - | chr3_2:38244727-38244746 | Msa0404940:intron | 30.0% |
| !!! | AATTTCGTTCGTTTTAAAGC+TGG | + | chr3_2:38244787-38244806 | None:intergenic | 30.0% |
| CTCCAATATTAAAAATGAGG+CGG | + | chr3_2:38245154-38245173 | None:intergenic | 30.0% | |
| CTGCTCCAATATTAAAAATG+AGG | + | chr3_2:38245157-38245176 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGAGCTTCTTGATG+GGG | - | chr3_2:38245179-38245198 | Msa0404940:CDS | 30.0% |
| ! | TTCTGGTCGAGATTTTATAA+GGG | - | chr3_2:38245320-38245339 | Msa0404940:CDS | 30.0% |
| AGCATCTTGTTGCAAAATTA+GGG | + | chr3_2:38245442-38245461 | None:intergenic | 30.0% | |
| AAGCATCTTGTTGCAAAATT+AGG | + | chr3_2:38245443-38245462 | None:intergenic | 30.0% | |
| TTATATTCAGATCATCACTG+TGG | - | chr3_2:38245498-38245517 | Msa0404940:CDS | 30.0% | |
| TATGTTGAAAAGATGTGTTG+AGG | - | chr3_2:38245564-38245583 | Msa0404940:intron | 30.0% | |
| TACAGTTAAAAGCTTGCAAA+AGG | + | chr3_2:38245690-38245709 | None:intergenic | 30.0% | |
| GAAAGATAAGATCAATGTGA+AGG | + | chr3_2:38245845-38245864 | None:intergenic | 30.0% | |
| TCACATTGATCTTATCTTTC+TGG | - | chr3_2:38245845-38245864 | Msa0404940:intron | 30.0% | |
| TCAAAATGGTAAAAGGATGT+AGG | - | chr3_2:38245934-38245953 | Msa0404940:intron | 30.0% | |
| CAAAATGGTAAAAGGATGTA+GGG | - | chr3_2:38245935-38245954 | Msa0404940:intron | 30.0% | |
| !! | AATAGAAGGTGCAAATGTTT+TGG | + | chr3_2:38246102-38246121 | None:intergenic | 30.0% |
| AGACAAGAGATAAGTAAGTT+TGG | + | chr3_2:38246279-38246298 | None:intergenic | 30.0% | |
| AAACTTACTTATCTCTTGTC+TGG | - | chr3_2:38246278-38246297 | Msa0404940:intron | 30.0% | |
| TGTAGATTATCCATGAGTTT+GGG | + | chr3_2:38246554-38246573 | None:intergenic | 30.0% | |
| ATGTAGATTATCCATGAGTT+TGG | + | chr3_2:38246555-38246574 | None:intergenic | 30.0% | |
| AATCAAGTGGACATGAATAT+CGG | + | chr3_2:38246673-38246692 | None:intergenic | 30.0% | |
| TATTCATGTCCACTTGATTT+AGG | - | chr3_2:38246674-38246693 | Msa0404940:intron | 30.0% | |
| ACATGTGATTAAATTTGGGT+TGG | + | chr3_2:38246709-38246728 | None:intergenic | 30.0% | |
| TTTAATCACATGTTTCAGTC+TGG | - | chr3_2:38246716-38246735 | Msa0404940:intron | 30.0% | |
| ! | ACAAATTTTACTGAGAAAGC+AGG | - | chr3_2:38246817-38246836 | Msa0404940:CDS | 30.0% |
| ! | AAAAAAGAACTCTAAGGGAA+AGG | - | chr3_2:38246841-38246860 | Msa0404940:intron | 30.0% |
| GGGATGACCATTTATTATTA+GGG | - | chr3_2:38246947-38246966 | Msa0404940:intron | 30.0% | |
| GGATGACCATTTATTATTAG+GGG | - | chr3_2:38246948-38246967 | Msa0404940:intron | 30.0% | |
| AGCATACCCCTAATAATAAA+TGG | + | chr3_2:38246957-38246976 | None:intergenic | 30.0% | |
| ! | TGAACATTGAAGGCTTTTAT+TGG | - | chr3_2:38247123-38247142 | Msa0404940:intron | 30.0% |
| CTTTAATTAAGGATGGAGTT+CGG | + | chr3_2:38247172-38247191 | None:intergenic | 30.0% | |
| ATGTTAACGATTAGCAGATT+TGG | + | chr3_2:38247236-38247255 | None:intergenic | 30.0% | |
| GTCCATTTCTATACTTCTAA+TGG | + | chr3_2:38247300-38247319 | None:intergenic | 30.0% | |
| TCAATAAAAATGTCCCTAGT+TGG | + | chr3_2:38247403-38247422 | None:intergenic | 30.0% | |
| ! | GAGACATGTAAGATTTTAGA+AGG | - | chr3_2:38247919-38247938 | Msa0404940:intron | 30.0% |
| CACAAATTGATAGGAAATGA+AGG | - | chr3_2:38248360-38248379 | Msa0404940:intron | 30.0% | |
| ! | GATGAAATGTAGGTATGTTT+TGG | - | chr3_2:38248414-38248433 | Msa0404940:intron | 30.0% |
| AATTAGAAATGTATACGTGC+GGG | + | chr3_2:38248569-38248588 | None:intergenic | 30.0% | |
| CAATTAGAAATGTATACGTG+CGG | + | chr3_2:38248570-38248589 | None:intergenic | 30.0% | |
| ACGTATACATTTCTAATTGG+AGG | - | chr3_2:38248571-38248590 | Msa0404940:intron | 30.0% | |
| ! | TTAACACATTGTAGAAGCAT+TGG | + | chr3_2:38248725-38248744 | None:intergenic | 30.0% |
| TCTACAATGTGTTAAAACCT+AGG | - | chr3_2:38248730-38248749 | Msa0404940:intron | 30.0% | |
| AATGTGTTAAAACCTAGGAT+GGG | - | chr3_2:38248735-38248754 | Msa0404940:intron | 30.0% | |
| AGATTTGTGTATGCTCTATA+TGG | - | chr3_2:38249013-38249032 | Msa0404940:intron | 30.0% | |
| AAAGAAATGAAGGATTGTCA+TGG | + | chr3_2:38249083-38249102 | None:intergenic | 30.0% | |
| CATGCTATAGAAAGAAATGA+AGG | + | chr3_2:38249093-38249112 | None:intergenic | 30.0% | |
| ! | TGATTTTGAACACATGAAGT+GGG | + | chr3_2:38249507-38249526 | None:intergenic | 30.0% |
| ! | TTGATTTTGAACACATGAAG+TGG | + | chr3_2:38249508-38249527 | None:intergenic | 30.0% |
| TCTCATATAAGATCCAAGTT+TGG | - | chr3_2:38249535-38249554 | Msa0404940:intron | 30.0% | |
| CTCATATAAGATCCAAGTTT+GGG | - | chr3_2:38249536-38249555 | Msa0404940:intron | 30.0% | |
| AACACAAATAAGATGCAACA+GGG | + | chr3_2:38249593-38249612 | None:intergenic | 30.0% | |
| AAACACAAATAAGATGCAAC+AGG | + | chr3_2:38249594-38249613 | None:intergenic | 30.0% | |
| AAGTGTATATACACACAAAG+TGG | + | chr3_2:38249618-38249637 | None:intergenic | 30.0% | |
| GAACAAATCTAACCTAATAG+TGG | - | chr3_2:38249779-38249798 | Msa0404940:intron | 30.0% | |
| !! | GCTCTCAATTAAATTTTAGC+CGG | - | chr3_2:38249900-38249919 | Msa0404940:intron | 30.0% |
| !! | AAATTTTAGCCGGAAAAAAG+TGG | - | chr3_2:38249910-38249929 | Msa0404940:intron | 30.0% |
| !!! | TGTTCAATTCCACTTTTTTC+CGG | + | chr3_2:38249922-38249941 | None:intergenic | 30.0% |
| !! | CAATGGACTAGAAAATGATT+AGG | - | chr3_2:38249940-38249959 | Msa0404940:intron | 30.0% |
| TAAAGACAGAAAAAGATCAC+TGG | - | chr3_2:38249969-38249988 | Msa0404940:intron | 30.0% | |
| AGTTAATGAATGAAGCGATA+AGG | + | chr3_2:38250152-38250171 | None:intergenic | 30.0% | |
| AAGTTATGGTAGATACTTTG+TGG | + | chr3_2:38250296-38250315 | None:intergenic | 30.0% | |
| GTAAGCTGATCAATATTTAC+GGG | + | chr3_2:38250388-38250407 | None:intergenic | 30.0% | |
| GTTACTTAATGCTATGATGT+TGG | - | chr3_2:38250421-38250440 | Msa0404940:intron | 30.0% | |
| AAACAGATGAAACAGATTTC+TGG | + | chr3_2:38250531-38250550 | None:intergenic | 30.0% | |
| ! | CATTCTTTTCATAAACTTGC+AGG | + | chr3_2:38250636-38250655 | None:intergenic | 30.0% |
| CTGCAAGTTTATGAAAAGAA+TGG | - | chr3_2:38250634-38250653 | Msa0404940:CDS | 30.0% | |
| GTTTATGAAAAGAATGGTTC+TGG | - | chr3_2:38250640-38250659 | Msa0404940:CDS | 30.0% | |
| ! | GAAAGTATATACTTTCCACA+AGG | + | chr3_2:38250688-38250707 | None:intergenic | 30.0% |
| ! | TGTGGAAAGTATATACTTTC+TGG | - | chr3_2:38250688-38250707 | Msa0404940:CDS | 30.0% |
| TTCCAAATCAGAAATCTTGA+GGG | + | chr3_2:38250785-38250804 | None:intergenic | 30.0% | |
| TTTCCAAATCAGAAATCTTG+AGG | + | chr3_2:38250786-38250805 | None:intergenic | 30.0% | |
| AAAAGATAGCAGATTCTTGT+TGG | - | chr3_2:38250930-38250949 | Msa0404940:CDS | 30.0% | |
| TATTCCAAAGATGTATTTCC+TGG | + | chr3_2:38250969-38250988 | None:intergenic | 30.0% | |
| AGCAAGATCTAATAACAAAC+CGG | + | chr3_2:38251041-38251060 | None:intergenic | 30.0% | |
| ! | TTATTAGATCTTGCTTTGGA+GGG | - | chr3_2:38251046-38251065 | Msa0404940:CDS | 30.0% |
| TTCACAGGTATTACTCTAAT+TGG | - | chr3_2:38251104-38251123 | Msa0404940:CDS | 30.0% | |
| ! | AGACAAGTGAAATACCATTT+TGG | - | chr3_2:38251186-38251205 | Msa0404940:CDS | 30.0% |
| !! | ATTTTGGTCCATGAATTGTA+GGG | - | chr3_2:38251202-38251221 | Msa0404940:CDS | 30.0% |
| ! | TTTAGCTACACAGAATCTTT+TGG | - | chr3_2:38251296-38251315 | Msa0404940:five_prime_UTR | 30.0% |
| ! | TTAGCTACACAGAATCTTTT+GGG | - | chr3_2:38251297-38251316 | Msa0404940:five_prime_UTR | 30.0% |
| !!! | TATTGAGTTTTAGCTCTATG+AGG | - | chr3_2:38251323-38251342 | Msa0404940:five_prime_UTR | 30.0% |
| ! | CGTCAATTTTCTAACTTTTG+AGG | - | chr3_2:38251485-38251504 | Msa0404940:intron | 30.0% |
| ! | TGTGCAACCATTTAGTTTAT+TGG | - | chr3_2:38251548-38251567 | Msa0404940:intron | 30.0% |
| ATATGTAAACCTAGCAAACA+TGG | + | chr3_2:38251578-38251597 | None:intergenic | 30.0% | |
| ! | ATGTTTGCTAGGTTTACATA+TGG | - | chr3_2:38251577-38251596 | Msa0404940:intron | 30.0% |
| CAGTCTCAAAATAACCTTTA+TGG | - | chr3_2:38251929-38251948 | Msa0404940:five_prime_UTR | 30.0% | |
| AACGCTTAAATGAACCATAA+AGG | + | chr3_2:38251946-38251965 | None:intergenic | 30.0% | |
| ! | TATGGTTCATTTAAGCGTTT+TGG | - | chr3_2:38251947-38251966 | Msa0404940:five_prime_UTR | 30.0% |
| !!! | AACTAGTTTTACACCGTCAT+CGG | - | chr3_2:38244473-38244492 | Msa0404940:intron | 35.0% |
| AATCTATGCTTATCCGATGA+CGG | + | chr3_2:38244489-38244508 | None:intergenic | 35.0% | |
| !!! | TTTTGGAGGCATTTTGTTGT+TGG | - | chr3_2:38244681-38244700 | Msa0404940:intron | 35.0% |
| CGAACGAAATTGTTGTGTAA+AGG | - | chr3_2:38244796-38244815 | Msa0404940:intron | 35.0% | |
| GGATTAAACAGTCTCTCTAA+CGG | - | chr3_2:38244817-38244836 | Msa0404940:intron | 35.0% | |
| !! | AACGAAGTTGTTGGTTCAAA+AGG | - | chr3_2:38244913-38244932 | Msa0404940:CDS | 35.0% |
| !! | ACGAAGTTGTTGGTTCAAAA+GGG | - | chr3_2:38244914-38244933 | Msa0404940:CDS | 35.0% |
| GTTTGTAAGGATAATCACGA+AGG | - | chr3_2:38244954-38244973 | Msa0404940:CDS | 35.0% | |
| TCTCTCGGTTATAAAAAGAC+CGG | - | chr3_2:38244985-38245004 | Msa0404940:CDS | 35.0% | |
| GTACGCACGTTGAATAAAAT+TGG | - | chr3_2:38245102-38245121 | Msa0404940:CDS | 35.0% | |
| !! | AGCCGCCTCATTTTTAATAT+TGG | - | chr3_2:38245149-38245168 | Msa0404940:CDS | 35.0% |
| ! | CTTCTGGTCGAGATTTTATA+AGG | - | chr3_2:38245319-38245338 | Msa0404940:CDS | 35.0% |
| TTCTCAGGTATCATTACAGT+CGG | + | chr3_2:38245393-38245412 | None:intergenic | 35.0% | |
| AATGATACCTGAGAAGAGAT+TGG | - | chr3_2:38245398-38245417 | Msa0404940:CDS | 35.0% | |
| GTTTCACAACTCATTGGATA+AGG | - | chr3_2:38245467-38245486 | Msa0404940:CDS | 35.0% | |
| ! | GATACCATCTAGAACATTAC+AGG | - | chr3_2:38245530-38245549 | Msa0404940:intron | 35.0% |
| ! | CTAACCTGTAATGTTCTAGA+TGG | + | chr3_2:38245537-38245556 | None:intergenic | 35.0% |
| GATCAATGTGAAGGTTACAT+CGG | + | chr3_2:38245836-38245855 | None:intergenic | 35.0% | |
| ! | ACCATTTTGAGCTGTTCTTA+CGG | + | chr3_2:38245924-38245943 | None:intergenic | 35.0% |
| GAACAGCTCAAAATGGTAAA+AGG | - | chr3_2:38245927-38245946 | Msa0404940:intron | 35.0% | |
| GGTAACAAAAACAACACTAG+TGG | + | chr3_2:38246150-38246169 | None:intergenic | 35.0% | |
| TTACTTATCTCTTGTCTGGT+TGG | - | chr3_2:38246282-38246301 | Msa0404940:intron | 35.0% | |
| ACAACTAGAAGAGACTTCAA+AGG | + | chr3_2:38246317-38246336 | None:intergenic | 35.0% | |
| GTGACACACAAAAAAGAACA+GGG | + | chr3_2:38246453-38246472 | None:intergenic | 35.0% | |
| AACTATAACCTGAGCATTCA+GGG | + | chr3_2:38246581-38246600 | None:intergenic | 35.0% | |
| AAACTATAACCTGAGCATTC+AGG | + | chr3_2:38246582-38246601 | None:intergenic | 35.0% | |
| AAGCATATTCTGTTGTCATC+AGG | - | chr3_2:38246611-38246630 | Msa0404940:intron | 35.0% | |
| AGCATATTCTGTTGTCATCA+GGG | - | chr3_2:38246612-38246631 | Msa0404940:intron | 35.0% | |
| AGTTATGTGCCTAAATCAAG+TGG | + | chr3_2:38246686-38246705 | None:intergenic | 35.0% | |
| CAGGCAAAAAAGAACTCTAA+GGG | - | chr3_2:38246836-38246855 | Msa0404940:CDS | 35.0% | |
| AACATTAAGGAGTTAGGGAA+TGG | + | chr3_2:38246922-38246941 | None:intergenic | 35.0% | |
| CTCACAACATTAAGGAGTTA+GGG | + | chr3_2:38246927-38246946 | None:intergenic | 35.0% | |
| CTAACTCCTTAATGTTGTGA+GGG | - | chr3_2:38246926-38246945 | Msa0404940:intron | 35.0% | |
| TAACTCCTTAATGTTGTGAG+GGG | - | chr3_2:38246927-38246946 | Msa0404940:intron | 35.0% | |
| GGGGATGACCATTTATTATT+AGG | - | chr3_2:38246946-38246965 | Msa0404940:intron | 35.0% | |
| AATGTTCATTAGTGTCACAC+TGG | + | chr3_2:38247111-38247130 | None:intergenic | 35.0% | |
| GTGACACTAATGAACATTGA+AGG | - | chr3_2:38247113-38247132 | Msa0404940:intron | 35.0% | |
| ! | ATTGAAGGCTTTTATTGGAC+AGG | - | chr3_2:38247128-38247147 | Msa0404940:intron | 35.0% |
| CGAACTCCATCCTTAATTAA+AGG | - | chr3_2:38247170-38247189 | Msa0404940:intron | 35.0% | |
| AAGATGCATGTCTCCTTAAT+TGG | - | chr3_2:38247455-38247474 | Msa0404940:intron | 35.0% | |
| CCAAACTGCAATTCCAATTA+AGG | + | chr3_2:38247471-38247490 | None:intergenic | 35.0% | |
| CCTTAATTGGAATTGCAGTT+TGG | - | chr3_2:38247468-38247487 | Msa0404940:intron | 35.0% | |
| AGAACATAGTGTTAGGATAC+TGG | - | chr3_2:38247573-38247592 | Msa0404940:intron | 35.0% | |
| GAACATAGTGTTAGGATACT+GGG | - | chr3_2:38247574-38247593 | Msa0404940:intron | 35.0% | |
| TGAGAGTGGAAGAAAAGATA+TGG | - | chr3_2:38247693-38247712 | Msa0404940:intron | 35.0% | |
| GATTGAATTGTCTCTTCTCA+AGG | - | chr3_2:38247753-38247772 | Msa0404940:intron | 35.0% | |
| !!! | TTTGTTTTGGGTTGCTTTCA+AGG | - | chr3_2:38247857-38247876 | Msa0404940:intron | 35.0% |
| ! | AGAAGGAAAAAGGCATAAGA+TGG | - | chr3_2:38247936-38247955 | Msa0404940:intron | 35.0% |
| AGTATTCTTTACCTTGGTCT+TGG | - | chr3_2:38248143-38248162 | Msa0404940:intron | 35.0% | |
| TAGATGGGAAGTTAGAATTG+TGG | - | chr3_2:38248252-38248271 | Msa0404940:intron | 35.0% | |
| TCGTAAGCACACAAATTGAT+AGG | - | chr3_2:38248351-38248370 | Msa0404940:intron | 35.0% | |
| GTAAACCATAGAATACAAGC+TGG | - | chr3_2:38248388-38248407 | Msa0404940:intron | 35.0% | |
| !! | TATGTTTTGGACTCATTGCT+GGG | - | chr3_2:38248427-38248446 | Msa0404940:intron | 35.0% |
| AAGCCTTGATACTCCAAAAA+TGG | - | chr3_2:38248529-38248548 | Msa0404940:intron | 35.0% | |
| !!! | TCTCCATTTTTGGAGTATCA+AGG | + | chr3_2:38248535-38248554 | None:intergenic | 35.0% |
| CGCACGTATACATTTCTAAT+TGG | - | chr3_2:38248568-38248587 | Msa0404940:intron | 35.0% | |
| CAATGTGTTAAAACCTAGGA+TGG | - | chr3_2:38248734-38248753 | Msa0404940:intron | 35.0% | |
| CCATTGCAGAAAATATGTCA+CGG | + | chr3_2:38248762-38248781 | None:intergenic | 35.0% | |
| ! | CGTGACATATTTTCTGCAAT+GGG | - | chr3_2:38248760-38248779 | Msa0404940:intron | 35.0% |
| !! | AGAATGTCATGATGGATTAG+CGG | + | chr3_2:38248844-38248863 | None:intergenic | 35.0% |
| ATCTGTGACATTGATCTTGT+CGG | - | chr3_2:38248865-38248884 | Msa0404940:intron | 35.0% | |
| AAACCATACTTCATCGTCAT+GGG | + | chr3_2:38249177-38249196 | None:intergenic | 35.0% | |
| ATGATCGAACTGCAATCATT+TGG | - | chr3_2:38249240-38249259 | Msa0404940:intron | 35.0% | |
| TGATCGAACTGCAATCATTT+GGG | - | chr3_2:38249241-38249260 | Msa0404940:intron | 35.0% | |
| TACAATTGGTCACTGCATTT+AGG | + | chr3_2:38249318-38249337 | None:intergenic | 35.0% | |
| GTTCTCTTCTACAGTTACAT+AGG | - | chr3_2:38249375-38249394 | Msa0404940:intron | 35.0% | |
| GTTATCAATAGCATAATCCC+TGG | - | chr3_2:38249410-38249429 | Msa0404940:intron | 35.0% | |
| AATTGAACAATGTTGGACCA+GGG | + | chr3_2:38249430-38249449 | None:intergenic | 35.0% | |
| ACTTAGCAAAGCAAAGAACT+CGG | - | chr3_2:38249813-38249832 | Msa0404940:intron | 35.0% | |
| AAGAACTCGGCAATAATAGT+AGG | - | chr3_2:38249826-38249845 | Msa0404940:intron | 35.0% | |
| ATGTTAGAATATGTTGTGGG+TGG | - | chr3_2:38250108-38250127 | Msa0404940:intron | 35.0% | |
| TGTTAGAATATGTTGTGGGT+GGG | - | chr3_2:38250109-38250128 | Msa0404940:intron | 35.0% | |
| TAATGAATGAAGCGATAAGG+TGG | + | chr3_2:38250149-38250168 | None:intergenic | 35.0% | |
| ATATCCAGGGAATATAAGGT+TGG | + | chr3_2:38250194-38250213 | None:intergenic | 35.0% | |
| AGTATCTACCATAACTTGAC+TGG | - | chr3_2:38250299-38250318 | Msa0404940:intron | 35.0% | |
| GTATCTACCATAACTTGACT+GGG | - | chr3_2:38250300-38250319 | Msa0404940:intron | 35.0% | |
| ! | TTATTTGGCCTTCCTTCTAT+AGG | - | chr3_2:38250459-38250478 | Msa0404940:intron | 35.0% |
| CATTTGTGTCTACCTATAGA+AGG | + | chr3_2:38250474-38250493 | None:intergenic | 35.0% | |
| CTTCTATAGGTAGACACAAA+TGG | - | chr3_2:38250472-38250491 | Msa0404940:CDS | 35.0% | |
| AATCTGTTTCATCTGTTTCC+TGG | - | chr3_2:38250533-38250552 | Msa0404940:CDS | 35.0% | |
| ! | AAGTATATACTTTCTGGCCT+CGG | - | chr3_2:38250694-38250713 | Msa0404940:CDS | 35.0% |
| !! | TGACAAAAGCATTTGCATGT+GGG | - | chr3_2:38250717-38250736 | Msa0404940:CDS | 35.0% |
| ATTTGCATGTGGGAATTAGA+CGG | - | chr3_2:38250727-38250746 | Msa0404940:CDS | 35.0% | |
| AAAGAAGTTGAGTCTTGGAA+AGG | - | chr3_2:38250751-38250770 | Msa0404940:CDS | 35.0% | |
| AACCCTCAAGATTTCTGATT+TGG | - | chr3_2:38250780-38250799 | Msa0404940:CDS | 35.0% | |
| GATTTGGAAATAACAGGTGA+CGG | - | chr3_2:38250796-38250815 | Msa0404940:CDS | 35.0% | |
| ATTTGGAAATAACAGGTGAC+GGG | - | chr3_2:38250797-38250816 | Msa0404940:CDS | 35.0% | |
| GCTCTTCAATAAAGAAACGA+AGG | - | chr3_2:38250858-38250877 | Msa0404940:CDS | 35.0% | |
| TGAACCAGGAAATACATCTT+TGG | - | chr3_2:38250962-38250981 | Msa0404940:CDS | 35.0% | |
| ! | AAGGAGATCTTAAGCTTGTT+GGG | - | chr3_2:38250992-38251011 | Msa0404940:CDS | 35.0% |
| GCAAGATCTAATAACAAACC+GGG | + | chr3_2:38251040-38251059 | None:intergenic | 35.0% | |
| GTTATTAGATCTTGCTTTGG+AGG | - | chr3_2:38251045-38251064 | Msa0404940:CDS | 35.0% | |
| AAGCAATCGTTTATTGCTAG+TGG | - | chr3_2:38251072-38251091 | Msa0404940:CDS | 35.0% | |
| CTACAATTCATGGACCAAAA+TGG | + | chr3_2:38251203-38251222 | None:intergenic | 35.0% | |
| !! | CATTTTGGTCCATGAATTGT+AGG | - | chr3_2:38251201-38251220 | Msa0404940:CDS | 35.0% |
| ! | TTTTGGTCCATGAATTGTAG+GGG | - | chr3_2:38251203-38251222 | Msa0404940:CDS | 35.0% |
| AAATATTTGCACACGGAAGA+CGG | - | chr3_2:38251414-38251433 | Msa0404940:intron | 35.0% | |
| ATTGGATTTCCATGTTTGCT+AGG | - | chr3_2:38251566-38251585 | Msa0404940:intron | 35.0% | |
| ! | GTAACTTGTAAGGACAGTAA+AGG | + | chr3_2:38251869-38251888 | None:intergenic | 35.0% |
| ! | GTGTCTACTTGTAACTTGTA+AGG | + | chr3_2:38251879-38251898 | None:intergenic | 35.0% |
| CAAATGATCAACGGAGTTAC+CGG | + | chr3_2:38244162-38244181 | None:intergenic | 40.0% | |
| ! | CAGGAAGTGCAAATGATCAA+CGG | + | chr3_2:38244171-38244190 | None:intergenic | 40.0% |
| ! | GTTTAATGGAAGTGCAGTGA+CGG | - | chr3_2:38244446-38244465 | Msa0404940:intron | 40.0% |
| !! | TGTTCCTTCACTACTTTTGG+AGG | - | chr3_2:38244667-38244686 | Msa0404940:intron | 40.0% |
| AATGCCTCCAAAAGTAGTGA+AGG | + | chr3_2:38244674-38244693 | None:intergenic | 40.0% | |
| !! | ACGAAGGCATTGTATTCTCT+CGG | - | chr3_2:38244970-38244989 | Msa0404940:CDS | 40.0% |
| CTCTCGGTTATAAAAAGACC+GGG | - | chr3_2:38244986-38245005 | Msa0404940:CDS | 40.0% | |
| TCTCGGTTATAAAAAGACCG+GGG | - | chr3_2:38244987-38245006 | Msa0404940:CDS | 40.0% | |
| CATATCGTTGAATTCGTCTG+TGG | - | chr3_2:38245032-38245051 | Msa0404940:CDS | 40.0% | |
| GGTAAATGTGTTTATGCAGC+AGG | - | chr3_2:38245053-38245072 | Msa0404940:CDS | 40.0% | |
| TTTATGCAGCAGGTACTTGA+TGG | - | chr3_2:38245063-38245082 | Msa0404940:CDS | 40.0% | |
| TCTTGATGGGGATAAGGTTA+TGG | - | chr3_2:38245191-38245210 | Msa0404940:CDS | 40.0% | |
| TGGATGCATTGAAGACATTG+AGG | - | chr3_2:38245211-38245230 | Msa0404940:CDS | 40.0% | |
| TCTCAGGTATCATTACAGTC+GGG | + | chr3_2:38245392-38245411 | None:intergenic | 40.0% | |
| AGATGTTCCAATCTCTTCTC+AGG | + | chr3_2:38245408-38245427 | None:intergenic | 40.0% | |
| TTGCTCGTTTCACAACTCAT+TGG | - | chr3_2:38245461-38245480 | Msa0404940:CDS | 40.0% | |
| ! | CAAAATCTCCGTTGTTGACT+TGG | - | chr3_2:38245628-38245647 | Msa0404940:intron | 40.0% |
| ACCAACTACCAAGTCAACAA+CGG | + | chr3_2:38245639-38245658 | None:intergenic | 40.0% | |
| ! | CCATTTTGAGCTGTTCTTAC+GGG | + | chr3_2:38245923-38245942 | None:intergenic | 40.0% |
| TGTAGGGACATTTGATATGC+TGG | - | chr3_2:38245951-38245970 | Msa0404940:intron | 40.0% | |
| GTAGGGACATTTGATATGCT+GGG | - | chr3_2:38245952-38245971 | Msa0404940:intron | 40.0% | |
| TAGGGACATTTGATATGCTG+GGG | - | chr3_2:38245953-38245972 | Msa0404940:intron | 40.0% | |
| ! | TACATCACTTGCTGAGAAGT+GGG | + | chr3_2:38246001-38246020 | None:intergenic | 40.0% |
| ACTAGAAGAGACTTCAAAGG+AGG | + | chr3_2:38246314-38246333 | None:intergenic | 40.0% | |
| ! | AAGTCTCTTCTAGTTGTCTG+TGG | - | chr3_2:38246320-38246339 | Msa0404940:intron | 40.0% |
| AACAAGCACAGATGGAAACA+GGG | + | chr3_2:38246375-38246394 | None:intergenic | 40.0% | |
| CACAAAAAAGAACAGGGACA+GGG | + | chr3_2:38246447-38246466 | None:intergenic | 40.0% | |
| ACACAAAAAAGAACAGGGAC+AGG | + | chr3_2:38246448-38246467 | None:intergenic | 40.0% | |
| CGTGACACACAAAAAAGAAC+AGG | + | chr3_2:38246454-38246473 | None:intergenic | 40.0% | |
| GCATATTCTGTTGTCATCAG+GGG | - | chr3_2:38246613-38246632 | Msa0404940:intron | 40.0% | |
| TGTGACGATGATACCACATA+TGG | + | chr3_2:38246643-38246662 | None:intergenic | 40.0% | |
| GCAGGCAAAAAAGAACTCTA+AGG | - | chr3_2:38246835-38246854 | Msa0404940:CDS | 40.0% | |
| TAAGGAGTTAGGGAATGGTT+TGG | + | chr3_2:38246917-38246936 | None:intergenic | 40.0% | |
| CCTCACAACATTAAGGAGTT+AGG | + | chr3_2:38246928-38246947 | None:intergenic | 40.0% | |
| CCTAACTCCTTAATGTTGTG+AGG | - | chr3_2:38246925-38246944 | Msa0404940:intron | 40.0% | |
| ! | TGGACTAGAATTTGGTCAGT+AGG | - | chr3_2:38247315-38247334 | Msa0404940:intron | 40.0% |
| !! | AGCTTGGTTGGTAAGATGAA+GGG | + | chr3_2:38247379-38247398 | None:intergenic | 40.0% |
| TAGTGTTAGGATACTGGGTT+TGG | - | chr3_2:38247579-38247598 | Msa0404940:intron | 40.0% | |
| AGTGTTAGGATACTGGGTTT+GGG | - | chr3_2:38247580-38247599 | Msa0404940:intron | 40.0% | |
| TTTGGGCTAAGACCAACAAA+TGG | - | chr3_2:38247597-38247616 | Msa0404940:intron | 40.0% | |
| TTGGGCTAAGACCAACAAAT+GGG | - | chr3_2:38247598-38247617 | Msa0404940:intron | 40.0% | |
| AATAGAGAGGTTAGAGGAGA+TGG | - | chr3_2:38247624-38247643 | Msa0404940:intron | 40.0% | |
| ATAGAGAGGTTAGAGGAGAT+GGG | - | chr3_2:38247625-38247644 | Msa0404940:intron | 40.0% | |
| AAGAGGCAGTTGTTTACAGA+GGG | - | chr3_2:38247668-38247687 | Msa0404940:intron | 40.0% | |
| GTAAGAGGATTCTAGATGAG+TGG | - | chr3_2:38247989-38248008 | Msa0404940:intron | 40.0% | |
| !! | TCTTTACCTTGGTCTTGGTT+TGG | - | chr3_2:38248148-38248167 | Msa0404940:intron | 40.0% |
| !! | CTTTACCTTGGTCTTGGTTT+GGG | - | chr3_2:38248149-38248168 | Msa0404940:intron | 40.0% |
| ! | TTGTAGAAAGCATGGCATCA+TGG | + | chr3_2:38248194-38248213 | None:intergenic | 40.0% |
| AGAATTGTGGTCACAAGTTC+TGG | - | chr3_2:38248265-38248284 | Msa0404940:intron | 40.0% | |
| !! | GTATGTTTTGGACTCATTGC+TGG | - | chr3_2:38248426-38248445 | Msa0404940:intron | 40.0% |
| ! | CATGGGTACTTCTCCATTTT+TGG | + | chr3_2:38248545-38248564 | None:intergenic | 40.0% |
| !! | TGTAGAAGCATTGGTGAAGA+GGG | + | chr3_2:38248716-38248735 | None:intergenic | 40.0% |
| !! | TTGTAGAAGCATTGGTGAAG+AGG | + | chr3_2:38248717-38248736 | None:intergenic | 40.0% |
| ! | CCGTGACATATTTTCTGCAA+TGG | - | chr3_2:38248759-38248778 | Msa0404940:intron | 40.0% |
| CACAGATGAGAATGTCATGA+TGG | + | chr3_2:38248852-38248871 | None:intergenic | 40.0% | |
| TCTGTGACATTGATCTTGTC+GGG | - | chr3_2:38248866-38248885 | Msa0404940:intron | 40.0% | |
| CAAACCATACTTCATCGTCA+TGG | + | chr3_2:38249178-38249197 | None:intergenic | 40.0% | |
| AGTTCGATCATTTGATGCTG+TGG | + | chr3_2:38249231-38249250 | None:intergenic | 40.0% | |
| GAATTGAACAATGTTGGACC+AGG | + | chr3_2:38249431-38249450 | None:intergenic | 40.0% | |
| !! | TGAACACATGAAGTGGGTTA+TGG | + | chr3_2:38249501-38249520 | None:intergenic | 40.0% |
| ACTCGGCAATAATAGTAGGA+AGG | - | chr3_2:38249830-38249849 | Msa0404940:intron | 40.0% | |
| CAGAAAAAGATCACTGGTGA+TGG | - | chr3_2:38249975-38249994 | Msa0404940:intron | 40.0% | |
| GTTAGAATATGTTGTGGGTG+GGG | - | chr3_2:38250110-38250129 | Msa0404940:intron | 40.0% | |
| GTCAAAACAGCAACTTGTAG+AGG | + | chr3_2:38250262-38250281 | None:intergenic | 40.0% | |
| TGTGTCTACCTATAGAAGGA+AGG | + | chr3_2:38250470-38250489 | None:intergenic | 40.0% | |
| CTATAGGTAGACACAAATGG+TGG | - | chr3_2:38250475-38250494 | Msa0404940:CDS | 40.0% | |
| !! | GTGACAAAAGCATTTGCATG+TGG | - | chr3_2:38250716-38250735 | Msa0404940:CDS | 40.0% |
| TTTGCATGTGGGAATTAGAC+GGG | - | chr3_2:38250728-38250747 | Msa0404940:CDS | 40.0% | |
| TTTGGAAATAACAGGTGACG+GGG | - | chr3_2:38250798-38250817 | Msa0404940:CDS | 40.0% | |
| GTTGGTTAATCTTCTGAACC+AGG | - | chr3_2:38250948-38250967 | Msa0404940:CDS | 40.0% | |
| GAAGGAGATCTTAAGCTTGT+TGG | - | chr3_2:38250991-38251010 | Msa0404940:CDS | 40.0% | |
| ATAAAAGTCATAGACGCTCC+CGG | - | chr3_2:38251019-38251038 | Msa0404940:CDS | 40.0% | |
| GTTTATTGCTAGTGGAAGTG+AGG | - | chr3_2:38251080-38251099 | Msa0404940:CDS | 40.0% | |
| GACCAAAATGTTATGGAACG+TGG | - | chr3_2:38251259-38251278 | Msa0404940:exon | 40.0% | |
| ! | GACCACGTTCCATAACATTT+TGG | + | chr3_2:38251264-38251283 | None:intergenic | 40.0% |
| ATTCCAGCTCACACAGTTAA+CGG | + | chr3_2:38251652-38251671 | None:intergenic | 40.0% | |
| TACTCAAATGCCTACAGCAA+TGG | - | chr3_2:38251753-38251772 | Msa0404940:intron | 40.0% | |
| TTGTAGGGGAACTTAGATGA+AGG | - | chr3_2:38251794-38251813 | Msa0404940:intron | 40.0% | |
| ! | AAAAGCGATCTGAAGTTCGC+CGG | + | chr3_2:38244130-38244149 | None:intergenic | 45.0% |
| !! | GATCGCTTTTCTTGCTTCTC+CGG | - | chr3_2:38244140-38244159 | Msa0404940:three_prime_UTR | 45.0% |
| CGTTGATCATTTGCACTTCC+TGG | - | chr3_2:38244169-38244188 | Msa0404940:three_prime_UTR | 45.0% | |
| GAATCGAAAACTGCAGATCC+AGG | + | chr3_2:38244190-38244209 | None:intergenic | 45.0% | |
| ! | GGCTGAGGCACATTTTTCAT+GGG | - | chr3_2:38244742-38244761 | Msa0404940:intron | 45.0% |
| ! | TGAGGCACATTTTTCATGGG+AGG | - | chr3_2:38244745-38244764 | Msa0404940:intron | 45.0% |
| ! | CACATTTTTCATGGGAGGTG+TGG | - | chr3_2:38244750-38244769 | Msa0404940:intron | 45.0% |
| CTCTAACGGTTCATCTTCTG+TGG | - | chr3_2:38244831-38244850 | Msa0404940:intron | 45.0% | |
| AGGATCTTCGAGTGACTTGA+TGG | - | chr3_2:38244864-38244883 | Msa0404940:intron | 45.0% | |
| TTGTCCCCTTCAGATGATAG+GGG | + | chr3_2:38244895-38244914 | None:intergenic | 45.0% | |
| GTTGTCCCCTTCAGATGATA+GGG | + | chr3_2:38244896-38244915 | None:intergenic | 45.0% | |
| !! | AGCAGGTACTTGATGGTGAT+TGG | - | chr3_2:38245070-38245089 | Msa0404940:CDS | 45.0% |
| !! | GCAGGTACTTGATGGTGATT+GGG | - | chr3_2:38245071-38245090 | Msa0404940:CDS | 45.0% |
| TGAGCTTCTTGATGGGGATA+AGG | - | chr3_2:38245185-38245204 | Msa0404940:CDS | 45.0% | |
| ACCAGAAGAACCACATTGGT+CGG | + | chr3_2:38245307-38245326 | None:intergenic | 45.0% | |
| ! | GTCGAGATTTTATAAGGGCG+AGG | - | chr3_2:38245325-38245344 | Msa0404940:CDS | 45.0% |
| TCAGGTATCATTACAGTCGG+GGG | + | chr3_2:38245390-38245409 | None:intergenic | 45.0% | |
| CTCAGGTATCATTACAGTCG+GGG | + | chr3_2:38245391-38245410 | None:intergenic | 45.0% | |
| !! | TCCGTTGTTGACTTGGTAGT+TGG | - | chr3_2:38245635-38245654 | Msa0404940:intron | 45.0% |
| !! | GTTGACTTGGTAGTTGGTAG+TGG | - | chr3_2:38245641-38245660 | Msa0404940:intron | 45.0% |
| CCCGTAAGAACAGCTCAAAA+TGG | - | chr3_2:38245920-38245939 | Msa0404940:intron | 45.0% | |
| TTGCTGAGAAGTGGGGAATT+GGG | + | chr3_2:38245993-38246012 | None:intergenic | 45.0% | |
| ! | ACATCACTTGCTGAGAAGTG+GGG | + | chr3_2:38246000-38246019 | None:intergenic | 45.0% |
| ! | CTACATCACTTGCTGAGAAG+TGG | + | chr3_2:38246002-38246021 | None:intergenic | 45.0% |
| CACTTCTCAGCAAGTGATGT+AGG | - | chr3_2:38246000-38246019 | Msa0404940:intron | 45.0% | |
| ATGTAGGTGAGTTTCGCTAC+TGG | - | chr3_2:38246016-38246035 | Msa0404940:intron | 45.0% | |
| TGTAGGTGAGTTTCGCTACT+GGG | - | chr3_2:38246017-38246036 | Msa0404940:intron | 45.0% | |
| GTGGTTCTCAACCATATCCT+TGG | - | chr3_2:38246339-38246358 | Msa0404940:intron | 45.0% | |
| ACAAGCACAGATGGAAACAG+GGG | + | chr3_2:38246374-38246393 | None:intergenic | 45.0% | |
| CAACAAGCACAGATGGAAAC+AGG | + | chr3_2:38246376-38246395 | None:intergenic | 45.0% | |
| CTGAAGTCAACAAGCACAGA+TGG | + | chr3_2:38246383-38246402 | None:intergenic | 45.0% | |
| AAGCCACTGCTTAAAGCAGA+AGG | - | chr3_2:38246512-38246531 | Msa0404940:intron | 45.0% | |
| ! | TTGCCTTCTGCTTTAAGCAG+TGG | + | chr3_2:38246518-38246537 | None:intergenic | 45.0% |
| TACATCAACCCTGAATGCTC+AGG | - | chr3_2:38246570-38246589 | Msa0404940:intron | 45.0% | |
| TGTGGTATCATCGTCACACT+TGG | - | chr3_2:38246645-38246664 | Msa0404940:intron | 45.0% | |
| CACATGTTTCAGTCTGGCAA+TGG | - | chr3_2:38246722-38246741 | Msa0404940:intron | 45.0% | |
| GTCATCCCCTCACAACATTA+AGG | + | chr3_2:38246935-38246954 | None:intergenic | 45.0% | |
| TTAAGGATGGAGTTCGGCTT+TGG | + | chr3_2:38247166-38247185 | None:intergenic | 45.0% | |
| !! | GGTAAGATGAAGGGCATTGA+AGG | + | chr3_2:38247370-38247389 | None:intergenic | 45.0% |
| !! | CAGCTTGGTTGGTAAGATGA+AGG | + | chr3_2:38247380-38247399 | None:intergenic | 45.0% |
| TCTCTATTCCGCCCATTTGT+TGG | + | chr3_2:38247612-38247631 | None:intergenic | 45.0% | |
| AACAAATGGGCGGAATAGAG+AGG | - | chr3_2:38247611-38247630 | Msa0404940:intron | 45.0% | |
| CTTCCAACTAACTGCCACAT+CGG | + | chr3_2:38247651-38247670 | None:intergenic | 45.0% | |
| ATGTGGCAGTTAGTTGGAAG+AGG | - | chr3_2:38247651-38247670 | Msa0404940:intron | 45.0% | |
| GAAGAGGCAGTTGTTTACAG+AGG | - | chr3_2:38247667-38247686 | Msa0404940:intron | 45.0% | |
| TTCTCAAGGAGCAATAGCTC+TGG | - | chr3_2:38247767-38247786 | Msa0404940:intron | 45.0% | |
| CCTCTTACACGTCATAGTCT+GGG | + | chr3_2:38247977-38247996 | None:intergenic | 45.0% | |
| TCCTCTTACACGTCATAGTC+TGG | + | chr3_2:38247978-38247997 | None:intergenic | 45.0% | |
| GAATACCCAAACCAAGACCA+AGG | + | chr3_2:38248157-38248176 | None:intergenic | 45.0% | |
| ACCATAGAATACAAGCTGGC+TGG | - | chr3_2:38248392-38248411 | Msa0404940:intron | 45.0% | |
| TCCAGCCAGCTTGTATTCTA+TGG | + | chr3_2:38248396-38248415 | None:intergenic | 45.0% | |
| AAGCTGGCTGGATGAAATGT+AGG | - | chr3_2:38248404-38248423 | Msa0404940:intron | 45.0% | |
| AGATTTGTGGATGGACACCT+AGG | - | chr3_2:38248506-38248525 | Msa0404940:intron | 45.0% | |
| ! | TTGGAGTATCAAGGCTTCCT+AGG | + | chr3_2:38248526-38248545 | None:intergenic | 45.0% |
| AATGTATACGTGCGGGACAT+GGG | + | chr3_2:38248562-38248581 | None:intergenic | 45.0% | |
| AAATGTATACGTGCGGGACA+TGG | + | chr3_2:38248563-38248582 | None:intergenic | 45.0% | |
| TGGTCGAGTCGTTAGAGATA+GGG | + | chr3_2:38248678-38248697 | None:intergenic | 45.0% | |
| ATGGTCGAGTCGTTAGAGAT+AGG | + | chr3_2:38248679-38248698 | None:intergenic | 45.0% | |
| ATGCCCATGACGATGAAGTA+TGG | - | chr3_2:38249171-38249190 | Msa0404940:intron | 45.0% | |
| TCGAACTGCAATCATTTGGG+AGG | - | chr3_2:38249244-38249263 | Msa0404940:intron | 45.0% | |
| GTTTACATGGCATCATCACC+AGG | + | chr3_2:38249686-38249705 | None:intergenic | 45.0% | |
| !! | AGATCACTGGTGATGGAATC+TGG | - | chr3_2:38249982-38250001 | Msa0404940:intron | 45.0% |
| TGCTGGATAGTGCATGAGAA+TGG | - | chr3_2:38250006-38250025 | Msa0404940:intron | 45.0% | |
| CAAGACTTCACTGGAGTTGT+TGG | - | chr3_2:38250038-38250057 | Msa0404940:intron | 45.0% | |
| TTCACTGGAGTTGTTGGATC+TGG | - | chr3_2:38250044-38250063 | Msa0404940:intron | 45.0% | |
| TCACTGGAGTTGTTGGATCT+GGG | - | chr3_2:38250045-38250064 | Msa0404940:intron | 45.0% | |
| !! | ATAAGGTTGGCTTGGTGGTT+GGG | + | chr3_2:38250181-38250200 | None:intergenic | 45.0% |
| !! | TATAAGGTTGGCTTGGTGGT+TGG | + | chr3_2:38250182-38250201 | None:intergenic | 45.0% |
| !! | GGAATATAAGGTTGGCTTGG+TGG | + | chr3_2:38250186-38250205 | None:intergenic | 45.0% |
| ! | CAGGGAATATAAGGTTGGCT+TGG | + | chr3_2:38250189-38250208 | None:intergenic | 45.0% |
| CAAGCCAACCTTATATTCCC+TGG | - | chr3_2:38250187-38250206 | Msa0404940:intron | 45.0% | |
| GGGCATATCCAGGGAATATA+AGG | + | chr3_2:38250198-38250217 | None:intergenic | 45.0% | |
| ! | AGTAATGGAGGGCATATCCA+GGG | + | chr3_2:38250207-38250226 | None:intergenic | 45.0% |
| CAAAAGGTCTCAGCGAGTAA+TGG | + | chr3_2:38250222-38250241 | None:intergenic | 45.0% | |
| CACATCACCCAGTCAAGTTA+TGG | + | chr3_2:38250310-38250329 | None:intergenic | 45.0% | |
| TCTGTTTCCTGGAGTCCTAA+TGG | - | chr3_2:38250544-38250563 | Msa0404940:CDS | 45.0% | |
| GTAAGAAGCTCTTGGCCATT+AGG | + | chr3_2:38250562-38250581 | None:intergenic | 45.0% | |
| CTCCACATGTAAGAAGCTCT+TGG | + | chr3_2:38250570-38250589 | None:intergenic | 45.0% | |
| AGAGCTTCTTACATGTGGAG+TGG | - | chr3_2:38250570-38250589 | Msa0404940:CDS | 45.0% | |
| ! | TGCAAATGCTTTTGTCACCG+AGG | + | chr3_2:38250714-38250733 | None:intergenic | 45.0% |
| ACGGGAAAGAAGTTGAGTCT+TGG | - | chr3_2:38250746-38250765 | Msa0404940:CDS | 45.0% | |
| TAGTGGAAGTGAGGATTCAC+AGG | - | chr3_2:38251089-38251108 | Msa0404940:CDS | 45.0% | |
| TTATGGAACGTGGTCGTTGT+CGG | - | chr3_2:38251269-38251288 | Msa0404940:five_prime_UTR | 45.0% | |
| TACATATGGCACAGAAGCTC+AGG | - | chr3_2:38251591-38251610 | Msa0404940:intron | 45.0% | |
| ACATATGGCACAGAAGCTCA+GGG | - | chr3_2:38251592-38251611 | Msa0404940:intron | 45.0% | |
| GACACTTTAAGCCCCATATC+CGG | + | chr3_2:38251722-38251741 | None:intergenic | 45.0% | |
| ! | GATATGGGGCTTAAAGTGTC+TGG | - | chr3_2:38251722-38251741 | Msa0404940:intron | 45.0% |
| AATGCCTACAGCAATGGCAA+CGG | - | chr3_2:38251759-38251778 | Msa0404940:intron | 45.0% | |
| ACGGTCATCACTGCAATTGT+AGG | - | chr3_2:38251778-38251797 | Msa0404940:intron | 45.0% | |
| CGGTCATCACTGCAATTGTA+GGG | - | chr3_2:38251779-38251798 | Msa0404940:intron | 45.0% | |
| GGTCATCACTGCAATTGTAG+GGG | - | chr3_2:38251780-38251799 | Msa0404940:intron | 45.0% | |
| !!! | TAAAATTTGTTATTTAATTA+GGG | + | chr3_2:38246807-38246826 | None:intergenic | 5.0% |
| !! | ATTTAAAGAATAAAAAAAAT+TGG | + | chr3_2:38248602-38248621 | None:intergenic | 5.0% |
| !! | TAATTTAATTCATAAATTTA+AGG | - | chr3_2:38249637-38249656 | Msa0404940:intron | 5.0% |
| !!! | TTTTTAATTTTTACTTTATT+TGG | - | chr3_2:38250077-38250096 | Msa0404940:intron | 5.0% |
| ! | GGGCTGAGGCACATTTTTCA+TGG | - | chr3_2:38244741-38244760 | Msa0404940:intron | 50.0% |
| TCTTCTGTGGAGCGTGTTGT+AGG | - | chr3_2:38244844-38244863 | Msa0404940:intron | 50.0% | |
| ! | CTTCGAGTGACTTGATGGCT+CGG | - | chr3_2:38244869-38244888 | Msa0404940:intron | 50.0% |
| CGTTGTCCCCTTCAGATGAT+AGG | + | chr3_2:38244897-38244916 | None:intergenic | 50.0% | |
| GAAGGGGACAACGAAGTTGT+TGG | - | chr3_2:38244904-38244923 | Msa0404940:intron | 50.0% | |
| AAAGACCGGGGAAAACCTAG+AGG | - | chr3_2:38244999-38245018 | Msa0404940:CDS | 50.0% | |
| GAAAACCTAGAGGAGGAGTC+TGG | - | chr3_2:38245009-38245028 | Msa0404940:CDS | 50.0% | |
| ATATGCCAGACTCCTCCTCT+AGG | + | chr3_2:38245017-38245036 | None:intergenic | 50.0% | |
| !! | GGTACTTGATGGTGATTGGG+AGG | - | chr3_2:38245074-38245093 | Msa0404940:CDS | 50.0% |
| TTGTCACCATCCGACCAATG+TGG | - | chr3_2:38245294-38245313 | Msa0404940:CDS | 50.0% | |
| GAAGAACCACATTGGTCGGA+TGG | + | chr3_2:38245303-38245322 | None:intergenic | 50.0% | |
| TCCGACCAATGTGGTTCTTC+TGG | - | chr3_2:38245303-38245322 | Msa0404940:CDS | 50.0% | |
| CTCGACCAGAAGAACCACAT+TGG | + | chr3_2:38245311-38245330 | None:intergenic | 50.0% | |
| AGCTGACACAGTCAGCATTG+TGG | - | chr3_2:38245771-38245790 | Msa0404940:intron | 50.0% | |
| TGCTGAGAAGTGGGGAATTG+GGG | + | chr3_2:38245992-38246011 | None:intergenic | 50.0% | |
| CTTGCTGAGAAGTGGGGAAT+TGG | + | chr3_2:38245994-38246013 | None:intergenic | 50.0% | |
| GGAGGATGTAGCCAAGGATA+TGG | + | chr3_2:38246353-38246372 | None:intergenic | 50.0% | |
| CAGAAGGCAACACTTCACGT+GGG | - | chr3_2:38246528-38246547 | Msa0404940:intron | 50.0% | |
| CATCAGGGGAGTTCCATATG+TGG | - | chr3_2:38246627-38246646 | Msa0404940:intron | 50.0% | |
| TTCAGTCTGGCAATGGTTGC+TGG | - | chr3_2:38246729-38246748 | Msa0404940:intron | 50.0% | |
| TACCAACCAAGCTGCCAACT+AGG | - | chr3_2:38247386-38247405 | Msa0404940:intron | 50.0% | |
| ACCAACCAAGCTGCCAACTA+GGG | - | chr3_2:38247387-38247406 | Msa0404940:intron | 50.0% | |
| AATGTCCCTAGTTGGCAGCT+TGG | + | chr3_2:38247395-38247414 | None:intergenic | 50.0% | |
| GGCTAAGACCAACAAATGGG+CGG | - | chr3_2:38247601-38247620 | Msa0404940:intron | 50.0% | |
| GTTTACAGAGGGAGTGAGAG+TGG | - | chr3_2:38247679-38247698 | Msa0404940:intron | 50.0% | |
| CCCAGACTATGACGTGTAAG+AGG | - | chr3_2:38247974-38247993 | Msa0404940:intron | 50.0% | |
| TCGAGTCGTTAGAGATAGGG+TGG | + | chr3_2:38248675-38248694 | None:intergenic | 50.0% | |
| ! | GAGGGTTGATCGATGGAGAA+TGG | + | chr3_2:38248698-38248717 | None:intergenic | 50.0% |
| ! | TGGTGAAGAGGGTTGATCGA+TGG | + | chr3_2:38248705-38248724 | None:intergenic | 50.0% |
| ATATGTCACGGTCCCATCCT+AGG | + | chr3_2:38248750-38248769 | None:intergenic | 50.0% | |
| AGACAGCAGCAAGACTTCAC+TGG | - | chr3_2:38250029-38250048 | Msa0404940:intron | 50.0% | |
| CACTGGAGTTGTTGGATCTG+GGG | - | chr3_2:38250046-38250065 | Msa0404940:intron | 50.0% | |
| ! | GAGTAATGGAGGGCATATCC+AGG | + | chr3_2:38250208-38250227 | None:intergenic | 50.0% |
| ! | AGGTCTCAGCGAGTAATGGA+GGG | + | chr3_2:38250218-38250237 | None:intergenic | 50.0% |
| AAGGTCTCAGCGAGTAATGG+AGG | + | chr3_2:38250219-38250238 | None:intergenic | 50.0% | |
| GGCCAAGAGCTTCTTACATG+TGG | - | chr3_2:38250565-38250584 | Msa0404940:CDS | 50.0% | |
| GCTTCTTACATGTGGAGTGG+AGG | - | chr3_2:38250573-38250592 | Msa0404940:CDS | 50.0% | |
| !! | TAGGCGTTGGGATGTCAGTA+CGG | - | chr3_2:38250603-38250622 | Msa0404940:CDS | 50.0% |
| GAAACCATGCACAGGAGATC+AGG | + | chr3_2:38250666-38250685 | None:intergenic | 50.0% | |
| TCCTGTGCATGGTTTCCTTG+TGG | - | chr3_2:38250670-38250689 | Msa0404940:CDS | 50.0% | |
| TCCACAAGGAAACCATGCAC+AGG | + | chr3_2:38250674-38250693 | None:intergenic | 50.0% | |
| GAGAACGCCCCTACAATTCA+TGG | + | chr3_2:38251213-38251232 | None:intergenic | 50.0% | |
| CATATGGCACAGAAGCTCAG+GGG | - | chr3_2:38251593-38251612 | Msa0404940:intron | 50.0% | |
| TTAACGGCTCCAGAATGACC+GGG | + | chr3_2:38251636-38251655 | None:intergenic | 50.0% | |
| GTTAACGGCTCCAGAATGAC+CGG | + | chr3_2:38251637-38251656 | None:intergenic | 50.0% | |
| ATGACCGTTGCCATTGCTGT+AGG | + | chr3_2:38251766-38251785 | None:intergenic | 50.0% | |
| CTCTACCACCGATCGCTCAT+CGG | - | chr3_2:38244101-38244120 | Msa0404940:three_prime_UTR | 55.0% | |
| ACCGATCGCTCATCGGATTC+CGG | - | chr3_2:38244108-38244127 | Msa0404940:three_prime_UTR | 55.0% | |
| CTCGGCCCCTATCATCTGAA+GGG | - | chr3_2:38244887-38244906 | Msa0404940:intron | 55.0% | |
| TCGGCCCCTATCATCTGAAG+GGG | - | chr3_2:38244888-38244907 | Msa0404940:intron | 55.0% | |
| ! | CTCCTCCTCTAGGTTTTCCC+CGG | + | chr3_2:38245007-38245026 | None:intergenic | 55.0% |
| GAGGACTCGCTTGAAACTGC+TGG | - | chr3_2:38245344-38245363 | Msa0404940:CDS | 55.0% | |
| GACTCGCTTGAAACTGCTGG+AGG | - | chr3_2:38245347-38245366 | Msa0404940:CDS | 55.0% | |
| GCTGAGAAGTGGGGAATTGG+GGG | + | chr3_2:38245991-38246010 | None:intergenic | 55.0% | |
| AACAGGGGAGGATGTAGCCA+AGG | + | chr3_2:38246359-38246378 | None:intergenic | 55.0% | |
| AGCACAGATGGAAACAGGGG+AGG | + | chr3_2:38246371-38246390 | None:intergenic | 55.0% | |
| GCAGAAGGCAACACTTCACG+TGG | - | chr3_2:38246527-38246546 | Msa0404940:intron | 55.0% | |
| TTCACGTGGGCCCAAACTCA+TGG | - | chr3_2:38246541-38246560 | Msa0404940:intron | 55.0% | |
| TCCCTAGTTGGCAGCTTGGT+TGG | + | chr3_2:38247391-38247410 | None:intergenic | 55.0% | |
| GGGCGGAATAGAGAGGTTAG+AGG | - | chr3_2:38247618-38247637 | Msa0404940:intron | 55.0% | |
| TTAGAGGAGATGGGCCGATG+TGG | - | chr3_2:38247634-38247653 | Msa0404940:intron | 55.0% | |
| !! | TGGTGATGGAATCTGGCTGC+TGG | - | chr3_2:38249989-38250008 | Msa0404940:intron | 55.0% |
| CTCTTGGCCATTAGGACTCC+AGG | + | chr3_2:38250554-38250573 | None:intergenic | 55.0% | |
| GTGGAGTGGAGGAAGCTGTT+AGG | - | chr3_2:38250584-38250603 | Msa0404940:CDS | 55.0% | |
| TGGAGGAAGCTGTTAGGCGT+TGG | - | chr3_2:38250590-38250609 | Msa0404940:CDS | 55.0% | |
| GGAGGAAGCTGTTAGGCGTT+GGG | - | chr3_2:38250591-38250610 | Msa0404940:CDS | 55.0% | |
| !! | AGGCGTTGGGATGTCAGTAC+GGG | - | chr3_2:38250604-38250623 | Msa0404940:CDS | 55.0% |
| TGCACACGGAAGACGGTATC+TGG | - | chr3_2:38251421-38251440 | Msa0404940:intron | 55.0% | |
| ACACGGAAGACGGTATCTGG+AGG | - | chr3_2:38251424-38251443 | Msa0404940:intron | 55.0% | |
| ! | GACTTGGTAGATGCGTTGCC+CGG | - | chr3_2:38251615-38251634 | Msa0404940:intron | 55.0% |
| GAGCCGTTAACTGTGTGAGC+TGG | - | chr3_2:38251646-38251665 | Msa0404940:intron | 55.0% | |
| TCCAGCTAACCCCCACATGT+TGG | - | chr3_2:38251671-38251690 | Msa0404940:intron | 55.0% | |
| TTGCTGAGGCCAACATGTGG+GGG | + | chr3_2:38251683-38251702 | None:intergenic | 55.0% | |
| CTTGCTGAGGCCAACATGTG+GGG | + | chr3_2:38251684-38251703 | None:intergenic | 55.0% | |
| ! | GCTTGCTGAGGCCAACATGT+GGG | + | chr3_2:38251685-38251704 | None:intergenic | 55.0% |
| ATGACCGGACAGTCCGGATA+TGG | - | chr3_2:38251706-38251725 | Msa0404940:intron | 55.0% | |
| TGACCGGACAGTCCGGATAT+GGG | - | chr3_2:38251707-38251726 | Msa0404940:intron | 55.0% | |
| GGAATCCGATGAGCGATCGG+TGG | + | chr3_2:38244109-38244128 | None:intergenic | 60.0% | |
| GCCGGAATCCGATGAGCGAT+CGG | + | chr3_2:38244112-38244131 | None:intergenic | 60.0% | |
| GCTCGGCCCCTATCATCTGA+AGG | - | chr3_2:38244886-38244905 | Msa0404940:intron | 60.0% | |
| GACCGGGGAAAACCTAGAGG+AGG | - | chr3_2:38245002-38245021 | Msa0404940:CDS | 60.0% | |
| GGGCCGATGTGGCAGTTAGT+TGG | - | chr3_2:38247645-38247664 | Msa0404940:intron | 60.0% | |
| !! | GTTGGCTTGGTGGTTGGGTG+GGG | + | chr3_2:38250176-38250195 | None:intergenic | 60.0% |
| !! | GGTTGGCTTGGTGGTTGGGT+GGG | + | chr3_2:38250177-38250196 | None:intergenic | 60.0% |
| !! | AGGTTGGCTTGGTGGTTGGG+TGG | + | chr3_2:38250178-38250197 | None:intergenic | 60.0% |
| CTGGCCTGATCTCCTGTGCA+TGG | - | chr3_2:38250659-38250678 | Msa0404940:CDS | 60.0% | |
| GCACAGAAGCTCAGGGGACT+TGG | - | chr3_2:38251599-38251618 | Msa0404940:intron | 60.0% | |
| GATGCGTTGCCCGGTCATTC+TGG | - | chr3_2:38251624-38251643 | Msa0404940:intron | 60.0% | |
| ! | GCCAACATGTGGGGGTTAGC+TGG | + | chr3_2:38251675-38251694 | None:intergenic | 60.0% |
| ! | CGCTTGCTGAGGCCAACATG+TGG | + | chr3_2:38251686-38251705 | None:intergenic | 60.0% |
| TGGCCTCAGCAAGCGATGAC+CGG | - | chr3_2:38251691-38251710 | Msa0404940:intron | 60.0% | |
| ! | TGTCCGGTCATCGCTTGCTG+AGG | + | chr3_2:38251697-38251716 | None:intergenic | 60.0% |
| CAAGCGATGACCGGACAGTC+CGG | - | chr3_2:38251700-38251719 | Msa0404940:intron | 60.0% | |
| GACCGGACAGTCCGGATATG+GGG | - | chr3_2:38251708-38251727 | Msa0404940:intron | 60.0% | |
| AGCCCCATATCCGGACTGTC+CGG | + | chr3_2:38251713-38251732 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 38244042 | 38251979 | 38244042 | ID=Msa0404940;Name=Msa0404940 |
| chr3_2 | mRNA | 38244042 | 38251979 | 38244042 | ID=Msa0404940-mRNA-1;Parent=Msa0404940;Name=Msa0404940-mRNA-1;_AED=0.03;_eAED=0.03;_QI=218|1|1|1|0.75|0.6|5|170|581 |
| chr3_2 | exon | 38244042 | 38244433 | 38244042 | ID=Msa0404940-mRNA-1:exon:7599;Parent=Msa0404940-mRNA-1 |
| chr3_2 | exon | 38244911 | 38245540 | 38244911 | ID=Msa0404940-mRNA-1:exon:7598;Parent=Msa0404940-mRNA-1 |
| chr3_2 | exon | 38246756 | 38246857 | 38246756 | ID=Msa0404940-mRNA-1:exon:7597;Parent=Msa0404940-mRNA-1 |
| chr3_2 | exon | 38250470 | 38251359 | 38250470 | ID=Msa0404940-mRNA-1:exon:7596;Parent=Msa0404940-mRNA-1 |
| chr3_2 | exon | 38251860 | 38251979 | 38251860 | ID=Msa0404940-mRNA-1:exon:7595;Parent=Msa0404940-mRNA-1 |
| chr3_2 | five_prime_UTR | 38251860 | 38251979 | 38251860 | ID=Msa0404940-mRNA-1:five_prime_utr;Parent=Msa0404940-mRNA-1 |
| chr3_2 | five_prime_UTR | 38251262 | 38251359 | 38251262 | ID=Msa0404940-mRNA-1:five_prime_utr;Parent=Msa0404940-mRNA-1 |
| chr3_2 | CDS | 38250470 | 38251261 | 38250470 | ID=Msa0404940-mRNA-1:cds;Parent=Msa0404940-mRNA-1 |
| chr3_2 | CDS | 38246756 | 38246857 | 38246756 | ID=Msa0404940-mRNA-1:cds;Parent=Msa0404940-mRNA-1 |
| chr3_2 | CDS | 38244911 | 38245540 | 38244911 | ID=Msa0404940-mRNA-1:cds;Parent=Msa0404940-mRNA-1 |
| chr3_2 | CDS | 38244212 | 38244433 | 38244212 | ID=Msa0404940-mRNA-1:cds;Parent=Msa0404940-mRNA-1 |
| chr3_2 | three_prime_UTR | 38244042 | 38244211 | 38244042 | ID=Msa0404940-mRNA-1:three_prime_utr;Parent=Msa0404940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
