AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0409110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0409110 MtrunA17_Chr3g0099561 96.457 254 7 1 19 270 1 254 1.39e-175 486
Msa0409110 MtrunA17_Chr1g0177151 62.846 253 93 1 9 261 2 253 1.53e-107 312
Msa0409110 MtrunA17_Chr8g0392781 56.446 287 87 2 16 264 8 294 1.18e-98 293
Msa0409110 MtrunA17_Chr7g0224601 64.602 226 76 2 42 263 28 253 3.39e-93 277
Msa0409110 MtrunA17_Chr6g0477171 65.534 206 71 0 63 268 45 250 3.56e-90 268
Msa0409110 MtrunA17_Chr5g0444621 54.464 224 102 0 47 270 25 248 3.43e-76 233
Msa0409110 MtrunA17_Chr3g0083821 57.377 122 44 2 61 178 13 130 1.37e-38 132
Msa0409110 MtrunA17_Chr3g0083811 55.405 74 33 0 190 263 1 74 4.69e-19 80.5
Msa0409110 MtrunA17_Chr5g0444631 66.038 53 18 0 116 168 4 56 7.55e-18 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0409110 AT3G20800.1 84.351 262 33 2 17 270 6 267 4.07e-155 435
Msa0409110 AT5G12980.1 82.278 237 42 0 34 270 27 263 1.13e-143 405
Msa0409110 AT2G32550.2 34.188 234 138 5 43 263 51 281 3.68e-36 131
Msa0409110 AT2G32550.3 34.906 212 124 4 63 263 34 242 1.53e-34 126
Msa0409110 AT2G32550.1 35.294 187 113 4 85 263 1 187 2.83e-29 111

Find 75 sgRNAs with CRISPR-Local

Find 934 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGCTGTTGGTCGAGTTCT+TGG 0.255938 3_2:+49492608 Msa0409110:CDS
AGGAATAGCATCCTTGTATC+AGG 0.295510 3_2:-49490304 None:intergenic
TGGATTTGCTTGTTGTGTTC+AGG 0.306518 3_2:-49491281 None:intergenic
TGCAGCCACTTCCTAGTTGT+TGG 0.322430 3_2:-49493498 None:intergenic
TCCCCTGTGCCTGCGCACTA+TGG 0.322674 3_2:+49491750 Msa0409110:CDS
AGAAAGTAACATTACCATTC+AGG 0.363182 3_2:-49490324 None:intergenic
TTCACAATGTTGGAGGGAAT+CGG 0.370583 3_2:+49493529 Msa0409110:three_prime_UTR
GGTGAATTGAGTATAAACTA+TGG 0.374597 3_2:+49493593 Msa0409110:three_prime_UTR
GCAGCCACTTCCTAGTTGTT+GGG 0.391810 3_2:-49493497 None:intergenic
CCATTGCTATGGAATTCATT+TGG 0.401738 3_2:+49488833 Msa0409110:CDS
GATTGTGCTGGAGTGAGGTT+GGG 0.411334 3_2:-49489780 None:intergenic
TCTGTTAGACGATGTGGGCT+TGG 0.418307 3_2:+49492556 Msa0409110:CDS
TGATTGTGCTGGAGTGAGGT+TGG 0.420676 3_2:-49489781 None:intergenic
ATGAACAACTCTTCTTCATT+CGG 0.422033 3_2:+49486131 Msa0409110:CDS
GTGCCTGCGCACTATGGAGA+TGG 0.431875 3_2:+49491756 Msa0409110:CDS
CATAGAAGAAGACACGGATT+GGG 0.432929 3_2:-49486111 None:intergenic
CCTCCTCCACCTTGCAGTGC+AGG 0.438234 3_2:-49493555 None:intergenic
CACACTCGATTTGATTGTGC+TGG 0.438779 3_2:-49489792 None:intergenic
TACTTGAGGCTTACTAGTCT+TGG 0.443121 3_2:+49491315 Msa0409110:CDS
TCACAATGTTGGAGGGAATC+GGG 0.446766 3_2:+49493530 Msa0409110:three_prime_UTR
CAAATGAATTCCATAGCAAT+GGG 0.454592 3_2:-49488832 None:intergenic
TTGGAAGAAGCGGGAGAAGA+AGG 0.455297 3_2:-49486161 None:intergenic
CAATGCTCTTGCCCTGCTCC+AGG 0.456652 3_2:+49489815 Msa0409110:CDS
TACTATTGCAGCACTTCTGC+AGG 0.460816 3_2:+49488856 Msa0409110:CDS
CCTCAAGTACTCAAAAGGTC+TGG 0.463934 3_2:-49491301 None:intergenic
TCTCCATAGTGCGCAGGCAC+AGG 0.464066 3_2:-49491753 None:intergenic
CCTGCACTGCAAGGTGGAGG+AGG 0.475249 3_2:+49493555 Msa0409110:three_prime_UTR
TCCCGCTTCTTCCAACTCGA+TGG 0.477236 3_2:+49486169 Msa0409110:CDS
AAGATCTCGCCCCATTGCTA+TGG 0.486631 3_2:+49488822 Msa0409110:CDS
TCATAGAAGAAGACACGGAT+TGG 0.492314 3_2:-49486112 None:intergenic
GTAAGCCTCAAGTACTCAAA+AGG 0.495117 3_2:-49491306 None:intergenic
CGCTCTTCTCGAACTCTCCA+AGG 0.503850 3_2:+49486244 Msa0409110:CDS
TGCCTGCGCACTATGGAGAT+GGG 0.509168 3_2:+49491757 Msa0409110:CDS
AAACTCATCTAACCTGGAGC+AGG 0.510559 3_2:-49489827 None:intergenic
GTTCCTGCACTGCAAGGTGG+AGG 0.514765 3_2:+49493552 Msa0409110:three_prime_UTR
CAACAACTGATTCACAATGT+TGG 0.517621 3_2:+49493519 Msa0409110:exon
CCAAATGAATTCCATAGCAA+TGG 0.523846 3_2:-49488833 None:intergenic
AGCCATCGAGTTGGAAGAAG+CGG 0.531152 3_2:-49486171 None:intergenic
AAAGATTCTGTTAGACGATG+TGG 0.532417 3_2:+49492550 Msa0409110:CDS
TTGCTTGTTGTGTTCAGGAA+CGG 0.537424 3_2:-49491276 None:intergenic
CTCCATAGTGCGCAGGCACA+GGG 0.541034 3_2:-49491752 None:intergenic
CTTACTAGTCTTGGTGTCAT+CGG 0.543029 3_2:+49491324 Msa0409110:CDS
GGGGAGTGAGCTCTCTAAAA+CGG 0.547334 3_2:+49491777 Msa0409110:CDS
TAGCATCTCACCCTGATACA+AGG 0.553761 3_2:+49490293 Msa0409110:CDS
TTCGAGAACGAGTTGTTCAG+AGG 0.556150 3_2:-49486195 None:intergenic
ACAAGGATGCTATTCCTGAA+TGG 0.556336 3_2:+49490310 Msa0409110:CDS
TGCTTCAACAGACGAGATGA+TGG 0.564466 3_2:-49492659 None:intergenic
TCCCCATCTCCATAGTGCGC+AGG 0.574764 3_2:-49491759 None:intergenic
AACTGATTCACAATGTTGGA+GGG 0.575243 3_2:+49493523 Msa0409110:exon
TTCAGAGGAAGCCATCGAGT+TGG 0.578031 3_2:-49486180 None:intergenic
AGGTTGGGAGGAGACAAAAC+AGG 0.578541 3_2:-49489765 None:intergenic
GCCATCGAGTTGGAAGAAGC+GGG 0.581211 3_2:-49486170 None:intergenic
CAACTGATTCACAATGTTGG+AGG 0.581651 3_2:+49493522 Msa0409110:exon
TTCAGGAGGACCCAACAACT+AGG 0.584464 3_2:+49493487 Msa0409110:intron
AAGATTCTGTTAGACGATGT+GGG 0.593200 3_2:+49492551 Msa0409110:CDS
AGGACCCAACAACTAGGAAG+TGG 0.596471 3_2:+49493493 Msa0409110:CDS
ATAGAAGAAGACACGGATTG+GGG 0.603072 3_2:-49486110 None:intergenic
AATCGGGTTCCTGCACTGCA+AGG 0.603945 3_2:+49493546 Msa0409110:three_prime_UTR
TGTGCTGGAGTGAGGTTGGG+AGG 0.609651 3_2:-49489777 None:intergenic
TGGTCGAGTTCTTGGAAACA+TGG 0.623015 3_2:+49492616 Msa0409110:CDS
GATTTGATTGTGCTGGAGTG+AGG 0.624347 3_2:-49489785 None:intergenic
AACTCATCTAACCTGGAGCA+GGG 0.624665 3_2:-49489826 None:intergenic
GGAATAGCATCCTTGTATCA+GGG 0.625986 3_2:-49490303 None:intergenic
TTCGTCTGTCAGATAACCCG+AGG 0.629082 3_2:+49492699 Msa0409110:CDS
TGTCATCGGTGCACTAGTGA+AGG 0.630356 3_2:+49491338 Msa0409110:CDS
GCCTGCGCACTATGGAGATG+GGG 0.643265 3_2:+49491758 Msa0409110:CDS
CGGGTTCCTGCACTGCAAGG+TGG 0.654150 3_2:+49493549 Msa0409110:three_prime_UTR
TCCATAGTGCGCAGGCACAG+GGG 0.677780 3_2:-49491751 None:intergenic
TTTAGTACACAAATACACAA+TGG 0.678480 3_2:-49493682 None:intergenic
TCACCAGGTTGATGATACTG+AGG 0.679946 3_2:+49491696 Msa0409110:intron
GTTGTTCATAGAAGAAGACA+CGG 0.685278 3_2:-49486117 None:intergenic
TAGAAGAAGACACGGATTGG+GGG 0.694498 3_2:-49486109 None:intergenic
TCGAGTTCTTGGAAACATGG+TGG 0.707168 3_2:+49492619 Msa0409110:CDS
AGGAACGGATACAAATACAG+AGG 0.734864 3_2:-49491261 None:intergenic
AAATGAATTCCATAGCAATG+GGG 0.758849 3_2:-49488831 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATAAAACAAAAAATAG+AGG - chr3_2:49491569-49491588 None:intergenic 10.0%
!!! AAATTATTGAATACAATTTT+TGG + chr3_2:49492360-49492379 Msa0409110:intron 10.0%
!! TAATATAAAACAAAAAATAG+AGG - chr3_2:49491569-49491588 None:intergenic 10.0%
!!! AAATTATTGAATACAATTTT+TGG + chr3_2:49492360-49492379 Msa0409110:intron 10.0%
!! TTAATGTAATTACATGTATT+TGG + chr3_2:49486477-49486496 Msa0409110:intron 15.0%
!!! ATTTGTATTTTTCTTTAAGA+AGG - chr3_2:49487579-49487598 None:intergenic 15.0%
!! TAAAGGAAAATAGATTAAAA+TGG + chr3_2:49487771-49487790 Msa0409110:intron 15.0%
!! ATTAAAAAAGTCAAATTTGT+CGG - chr3_2:49488419-49488438 None:intergenic 15.0%
!!! ATGTAATCATTATTTGTTAA+TGG + chr3_2:49488630-49488649 Msa0409110:intron 15.0%
!! TAATTATCAAATTTCAAAGT+TGG - chr3_2:49489484-49489503 None:intergenic 15.0%
!! ATATTACACTAAAATAAATG+TGG - chr3_2:49489625-49489644 None:intergenic 15.0%
!!! TTGATATTTTATTTTCTTTC+AGG + chr3_2:49489725-49489744 Msa0409110:intron 15.0%
!!! AATATTTTAGCAAAATTTCA+AGG + chr3_2:49489957-49489976 Msa0409110:intron 15.0%
!! AAGAACATAAAAAAAAATGA+CGG + chr3_2:49490225-49490244 Msa0409110:intron 15.0%
!! ATATTCAATATAAAACGAAA+AGG - chr3_2:49491123-49491142 None:intergenic 15.0%
!!! TTCGTTTTATATTGAATATA+AGG + chr3_2:49491124-49491143 Msa0409110:intron 15.0%
!!! TTAAATACTATTTTGTCATT+AGG + chr3_2:49492335-49492354 Msa0409110:intron 15.0%
!!! CTTTTATTGTATAGATTTTA+AGG + chr3_2:49492404-49492423 Msa0409110:intron 15.0%
!! TTATCTCATATACATTAATA+GGG - chr3_2:49492464-49492483 None:intergenic 15.0%
!! ATTATCTCATATACATTAAT+AGG - chr3_2:49492465-49492484 None:intergenic 15.0%
!!! TAACAATTTATTAGTTTTCT+TGG - chr3_2:49493002-49493021 None:intergenic 15.0%
!! ATAAATAGTTTAGATATTGT+AGG - chr3_2:49493050-49493069 None:intergenic 15.0%
!!! TTGTTTACAATACTTATTTT+TGG + chr3_2:49493455-49493474 Msa0409110:intron 15.0%
!! TTAATGTAATTACATGTATT+TGG + chr3_2:49486477-49486496 Msa0409110:intron 15.0%
!!! ATTTGTATTTTTCTTTAAGA+AGG - chr3_2:49487579-49487598 None:intergenic 15.0%
!! TAAAGGAAAATAGATTAAAA+TGG + chr3_2:49487771-49487790 Msa0409110:intron 15.0%
!! ATTAAAAAAGTCAAATTTGT+CGG - chr3_2:49488419-49488438 None:intergenic 15.0%
!!! ATGTAATCATTATTTGTTAA+TGG + chr3_2:49488630-49488649 Msa0409110:intron 15.0%
!! TAATTATCAAATTTCAAAGT+TGG - chr3_2:49489484-49489503 None:intergenic 15.0%
!! ATATTACACTAAAATAAATG+TGG - chr3_2:49489625-49489644 None:intergenic 15.0%
!!! TTGATATTTTATTTTCTTTC+AGG + chr3_2:49489725-49489744 Msa0409110:intron 15.0%
!!! AATATTTTAGCAAAATTTCA+AGG + chr3_2:49489957-49489976 Msa0409110:intron 15.0%
!! AAGAACATAAAAAAAAATGA+CGG + chr3_2:49490225-49490244 Msa0409110:intron 15.0%
!! ATATTCAATATAAAACGAAA+AGG - chr3_2:49491123-49491142 None:intergenic 15.0%
!!! TTCGTTTTATATTGAATATA+AGG + chr3_2:49491124-49491143 Msa0409110:intron 15.0%
!!! TTAAATACTATTTTGTCATT+AGG + chr3_2:49492335-49492354 Msa0409110:intron 15.0%
!!! CTTTTATTGTATAGATTTTA+AGG + chr3_2:49492404-49492423 Msa0409110:intron 15.0%
!! TTATCTCATATACATTAATA+GGG - chr3_2:49492464-49492483 None:intergenic 15.0%
!! ATTATCTCATATACATTAAT+AGG - chr3_2:49492465-49492484 None:intergenic 15.0%
!!! TAACAATTTATTAGTTTTCT+TGG - chr3_2:49493002-49493021 None:intergenic 15.0%
!! ATAAATAGTTTAGATATTGT+AGG - chr3_2:49493050-49493069 None:intergenic 15.0%
!!! TTGTTTACAATACTTATTTT+TGG + chr3_2:49493455-49493474 Msa0409110:intron 15.0%
!! CACGTATTTAAACAATTAAA+TGG - chr3_2:49486348-49486367 None:intergenic 20.0%
!! AATTGTTTAAATACGTGATT+AGG + chr3_2:49486351-49486370 Msa0409110:intron 20.0%
!! ATTGTTTAAATACGTGATTA+GGG + chr3_2:49486352-49486371 Msa0409110:intron 20.0%
!! ACAAAACAATCAACTAAAAA+AGG - chr3_2:49486618-49486637 None:intergenic 20.0%
!! TAATTGAATGTAATATCATG+TGG + chr3_2:49486763-49486782 Msa0409110:intron 20.0%
!! CCAGTCAAAAAAAATAAATT+AGG - chr3_2:49487252-49487271 None:intergenic 20.0%
!!! CCTAATTTATTTTTTTTGAC+TGG + chr3_2:49487249-49487268 Msa0409110:intron 20.0%
!! GTCATAATTCTGAATAAATT+AGG - chr3_2:49487282-49487301 None:intergenic 20.0%
!! ATTTATTCAGAATTATGACA+TGG + chr3_2:49487283-49487302 Msa0409110:intron 20.0%
!!! TAATCTATTTTCCTTTAAGA+AGG - chr3_2:49487768-49487787 None:intergenic 20.0%
!!! CAGTTAATATTTTTCTGTTT+CGG - chr3_2:49487913-49487932 None:intergenic 20.0%
!!! ATCTGGTATTCTAAAATAAA+GGG - chr3_2:49488099-49488118 None:intergenic 20.0%
!!! AATCTGGTATTCTAAAATAA+AGG - chr3_2:49488100-49488119 None:intergenic 20.0%
!!! TTTTTTTTTTTGTTAATGCG+AGG + chr3_2:49488257-49488276 Msa0409110:intron 20.0%
!! CAAAATTAACTAACATTTGA+AGG - chr3_2:49488340-49488359 None:intergenic 20.0%
!! AAGTTTCAAAAGAAACAAAA+GGG - chr3_2:49489087-49489106 None:intergenic 20.0%
!! AAAGTTTCAAAAGAAACAAA+AGG - chr3_2:49489088-49489107 None:intergenic 20.0%
!!! TTGTTTCTTTTGAAACTTTT+TGG + chr3_2:49489089-49489108 Msa0409110:intron 20.0%
!! ATAAAACTATGCTTTATGTT+GGG + chr3_2:49489122-49489141 Msa0409110:intron 20.0%
!! AAGTATATTTATGTTGTCAA+TGG - chr3_2:49489356-49489375 None:intergenic 20.0%
!!! ACTTAGTTTTGAATATATTG+TGG + chr3_2:49489372-49489391 Msa0409110:intron 20.0%
!!! CGAAAAAAGTATAATATCTA+TGG - chr3_2:49490171-49490190 None:intergenic 20.0%
!! AAAGAATGATCAAGTTAAAA+GGG - chr3_2:49490715-49490734 None:intergenic 20.0%
!! AAAAGAATGATCAAGTTAAA+AGG - chr3_2:49490716-49490735 None:intergenic 20.0%
!! AACTTTCTCCTATTATTTAA+AGG + chr3_2:49490962-49490981 Msa0409110:intron 20.0%
!! AAAAAAATTCAAAAGCAACA+AGG - chr3_2:49491033-49491052 None:intergenic 20.0%
!! CTTTAACTAATAAAAACCAA+TGG - chr3_2:49491173-49491192 None:intergenic 20.0%
!! TTAGTTAAAGATAGTTCATA+AGG + chr3_2:49491183-49491202 Msa0409110:intron 20.0%
!!! GGAGTAATTTTTAATCAATT+AGG + chr3_2:49493210-49493229 Msa0409110:intron 20.0%
!!! ATTTTTGGTTTTGTTTATTC+AGG + chr3_2:49493470-49493489 Msa0409110:intron 20.0%
!! CACGTATTTAAACAATTAAA+TGG - chr3_2:49486348-49486367 None:intergenic 20.0%
!! AATTGTTTAAATACGTGATT+AGG + chr3_2:49486351-49486370 Msa0409110:intron 20.0%
!! ATTGTTTAAATACGTGATTA+GGG + chr3_2:49486352-49486371 Msa0409110:intron 20.0%
!! ACAAAACAATCAACTAAAAA+AGG - chr3_2:49486618-49486637 None:intergenic 20.0%
!! TAATTGAATGTAATATCATG+TGG + chr3_2:49486763-49486782 Msa0409110:intron 20.0%
!! CCAGTCAAAAAAAATAAATT+AGG - chr3_2:49487252-49487271 None:intergenic 20.0%
!!! CCTAATTTATTTTTTTTGAC+TGG + chr3_2:49487249-49487268 Msa0409110:intron 20.0%
!! GTCATAATTCTGAATAAATT+AGG - chr3_2:49487282-49487301 None:intergenic 20.0%
!! ATTTATTCAGAATTATGACA+TGG + chr3_2:49487283-49487302 Msa0409110:intron 20.0%
!!! TAATCTATTTTCCTTTAAGA+AGG - chr3_2:49487768-49487787 None:intergenic 20.0%
!!! CAGTTAATATTTTTCTGTTT+CGG - chr3_2:49487913-49487932 None:intergenic 20.0%
!!! ATCTGGTATTCTAAAATAAA+GGG - chr3_2:49488099-49488118 None:intergenic 20.0%
!!! AATCTGGTATTCTAAAATAA+AGG - chr3_2:49488100-49488119 None:intergenic 20.0%
!!! TTTTTTTTTTTGTTAATGCG+AGG + chr3_2:49488257-49488276 Msa0409110:intron 20.0%
!! CAAAATTAACTAACATTTGA+AGG - chr3_2:49488340-49488359 None:intergenic 20.0%
!! AAGTTTCAAAAGAAACAAAA+GGG - chr3_2:49489087-49489106 None:intergenic 20.0%
!! AAAGTTTCAAAAGAAACAAA+AGG - chr3_2:49489088-49489107 None:intergenic 20.0%
!!! TTGTTTCTTTTGAAACTTTT+TGG + chr3_2:49489089-49489108 Msa0409110:intron 20.0%
!! ATAAAACTATGCTTTATGTT+GGG + chr3_2:49489122-49489141 Msa0409110:intron 20.0%
!! AAGTATATTTATGTTGTCAA+TGG - chr3_2:49489356-49489375 None:intergenic 20.0%
!!! ACTTAGTTTTGAATATATTG+TGG + chr3_2:49489372-49489391 Msa0409110:intron 20.0%
!!! CGAAAAAAGTATAATATCTA+TGG - chr3_2:49490171-49490190 None:intergenic 20.0%
!! AAAGAATGATCAAGTTAAAA+GGG - chr3_2:49490715-49490734 None:intergenic 20.0%
!! AAAAGAATGATCAAGTTAAA+AGG - chr3_2:49490716-49490735 None:intergenic 20.0%
!! AACTTTCTCCTATTATTTAA+AGG + chr3_2:49490962-49490981 Msa0409110:intron 20.0%
!! AAAAAAATTCAAAAGCAACA+AGG - chr3_2:49491033-49491052 None:intergenic 20.0%
!! CTTTAACTAATAAAAACCAA+TGG - chr3_2:49491173-49491192 None:intergenic 20.0%
!! TTAGTTAAAGATAGTTCATA+AGG + chr3_2:49491183-49491202 Msa0409110:intron 20.0%
!!! GGAGTAATTTTTAATCAATT+AGG + chr3_2:49493210-49493229 Msa0409110:intron 20.0%
!!! ATTTTTGGTTTTGTTTATTC+AGG + chr3_2:49493470-49493489 Msa0409110:intron 20.0%
! GAAAAAGGTAAAAGAGAAAA+TGG - chr3_2:49486296-49486315 None:intergenic 25.0%
!!! GTTTTGAGTTTGAAAGAAAA+AGG - chr3_2:49486311-49486330 None:intergenic 25.0%
! ATGTTACACTGTTTATGATT+AGG + chr3_2:49486639-49486658 Msa0409110:intron 25.0%
! TGTTACACTGTTTATGATTA+GGG + chr3_2:49486640-49486659 Msa0409110:intron 25.0%
!!! GGTTTTGTTAGTTAATTGTT+GGG + chr3_2:49486661-49486680 Msa0409110:intron 25.0%
!! TATGTGTTGAAATTTTGTTC+TGG + chr3_2:49486872-49486891 Msa0409110:intron 25.0%
!!! TTAGTTGATGATTACTGATT+TGG + chr3_2:49486979-49486998 Msa0409110:intron 25.0%
!!! ATGATTACTGATTTGGTTTT+TGG + chr3_2:49486986-49487005 Msa0409110:intron 25.0%
!! TTATAGTGTGATCAATTTTG+TGG + chr3_2:49487016-49487035 Msa0409110:intron 25.0%
!! TATAGTGTGATCAATTTTGT+GGG + chr3_2:49487017-49487036 Msa0409110:intron 25.0%
!! TGATTCCTTTTGTTGAAATT+AGG + chr3_2:49487088-49487107 Msa0409110:intron 25.0%
!! GATTCCTTTTGTTGAAATTA+GGG + chr3_2:49487089-49487108 Msa0409110:intron 25.0%
! ACACACATTTACGAAATTTA+CGG + chr3_2:49487486-49487505 Msa0409110:intron 25.0%
! GAAAAATACAAATATCCAGT+CGG + chr3_2:49487586-49487605 Msa0409110:intron 25.0%
!! ACAAAAGTACACACAATAAA+GGG - chr3_2:49487708-49487727 None:intergenic 25.0%
!! TCATCTTTTTAAACACAACA+CGG - chr3_2:49487862-49487881 None:intergenic 25.0%
!!! ATTCTAAAATAAAGGGGAAA+CGG - chr3_2:49488092-49488111 None:intergenic 25.0%
!!! TCTGGTATTCTAAAATAAAG+GGG - chr3_2:49488098-49488117 None:intergenic 25.0%
!!! AATTTGTTGAAACTCTAATC+TGG - chr3_2:49488116-49488135 None:intergenic 25.0%
! GATTAGAGTTTCAACAAATT+TGG + chr3_2:49488116-49488135 Msa0409110:intron 25.0%
! AAAAACTGTAACAACAAACA+AGG - chr3_2:49488479-49488498 None:intergenic 25.0%
! ATTTCTCCTTATGTTGAATT+TGG + chr3_2:49488594-49488613 Msa0409110:intron 25.0%
! TTTCTCCTTATGTTGAATTT+GGG + chr3_2:49488595-49488614 Msa0409110:intron 25.0%
!! TGTTTTATGTATTGTAGAAG+AGG + chr3_2:49488789-49488808 Msa0409110:intron 25.0%
!! GTTTTATGTATTGTAGAAGA+GGG + chr3_2:49488790-49488809 Msa0409110:intron 25.0%
! TGACTACAGATTAATATGAA+AGG - chr3_2:49488934-49488953 None:intergenic 25.0%
! CATAAAACTATGCTTTATGT+TGG + chr3_2:49489121-49489140 Msa0409110:intron 25.0%
! TTTATGTTGGGTTTGAATAT+TGG + chr3_2:49489134-49489153 Msa0409110:intron 25.0%
! TTTGAATGTGTAAGATACTA+TGG + chr3_2:49489181-49489200 Msa0409110:intron 25.0%
!! CTTTTATGTGTATCATACTA+TGG + chr3_2:49489218-49489237 Msa0409110:intron 25.0%
!! TTTTCCAAACTTTAATGTAG+CGG + chr3_2:49489260-49489279 Msa0409110:intron 25.0%
! TCTAATCATGGAAAAATAGT+TGG - chr3_2:49489461-49489480 None:intergenic 25.0%
! AAAACTGTGCATCTAAAAAT+TGG + chr3_2:49489545-49489564 Msa0409110:intron 25.0%
! AAATATCAAATCCAACTTAG+TGG - chr3_2:49489714-49489733 None:intergenic 25.0%
! AATCACCAAACATTGAAATT+TGG + chr3_2:49489909-49489928 Msa0409110:intron 25.0%
!!! ATTTTAGCAAAATTTCAAGG+TGG + chr3_2:49489960-49489979 Msa0409110:intron 25.0%
!! TTTTAGCAAAATTTCAAGGT+GGG + chr3_2:49489961-49489980 Msa0409110:intron 25.0%
! GTTCAGATAATCAATTGATT+AGG + chr3_2:49490134-49490153 Msa0409110:intron 25.0%
!! AAAAGTATAATATCTATGGC+TGG - chr3_2:49490167-49490186 None:intergenic 25.0%
! TATGCTTCAAATATTCTGAT+GGG + chr3_2:49490396-49490415 Msa0409110:intron 25.0%
! GTGTTCTTAAAAATCAAAGT+TGG + chr3_2:49490431-49490450 Msa0409110:intron 25.0%
! CTATTACTGTATTACTTAGA+TGG - chr3_2:49490525-49490544 None:intergenic 25.0%
! CATCTAAGTAATACAGTAAT+AGG + chr3_2:49490523-49490542 Msa0409110:intron 25.0%
! AATAGTGCTATGGAAATTAT+AGG + chr3_2:49490547-49490566 Msa0409110:intron 25.0%
! AAAATGATTTAGCATGTGTT+TGG - chr3_2:49492105-49492124 None:intergenic 25.0%
!!! GATATTCTTGTTTTACCTTT+TGG + chr3_2:49492193-49492212 Msa0409110:intron 25.0%
! TTTGAGTAATGACATTTGTA+TGG + chr3_2:49492304-49492323 Msa0409110:intron 25.0%
! TTGAGTAATGACATTTGTAT+GGG + chr3_2:49492305-49492324 Msa0409110:intron 25.0%
!!! GAATACAATTTTTGGTCATT+AGG + chr3_2:49492368-49492387 Msa0409110:intron 25.0%
! AATCACACCAAAAAAAAGAA+TGG - chr3_2:49492960-49492979 None:intergenic 25.0%
! ATTTATTATCTAATTCCACC+TGG + chr3_2:49493064-49493083 Msa0409110:intron 25.0%
!! ATTCTATTTGTCACTTATGT+AGG - chr3_2:49493185-49493204 None:intergenic 25.0%
!! GATTCGACAAAATTTTACAT+TGG - chr3_2:49493245-49493264 None:intergenic 25.0%
! AAAACAGACTATTGCATATT+TGG - chr3_2:49493281-49493300 None:intergenic 25.0%
! GTGAAGAAATCATTAACAAT+AGG + chr3_2:49493322-49493341 Msa0409110:intron 25.0%
! TTTAGTACACAAATACACAA+TGG - chr3_2:49493685-49493704 None:intergenic 25.0%
! GAAAAAGGTAAAAGAGAAAA+TGG - chr3_2:49486296-49486315 None:intergenic 25.0%
!!! GTTTTGAGTTTGAAAGAAAA+AGG - chr3_2:49486311-49486330 None:intergenic 25.0%
! ATGTTACACTGTTTATGATT+AGG + chr3_2:49486639-49486658 Msa0409110:intron 25.0%
! TGTTACACTGTTTATGATTA+GGG + chr3_2:49486640-49486659 Msa0409110:intron 25.0%
!!! GGTTTTGTTAGTTAATTGTT+GGG + chr3_2:49486661-49486680 Msa0409110:intron 25.0%
!! TATGTGTTGAAATTTTGTTC+TGG + chr3_2:49486872-49486891 Msa0409110:intron 25.0%
!!! TTAGTTGATGATTACTGATT+TGG + chr3_2:49486979-49486998 Msa0409110:intron 25.0%
!!! ATGATTACTGATTTGGTTTT+TGG + chr3_2:49486986-49487005 Msa0409110:intron 25.0%
!! TTATAGTGTGATCAATTTTG+TGG + chr3_2:49487016-49487035 Msa0409110:intron 25.0%
!! TATAGTGTGATCAATTTTGT+GGG + chr3_2:49487017-49487036 Msa0409110:intron 25.0%
!! TGATTCCTTTTGTTGAAATT+AGG + chr3_2:49487088-49487107 Msa0409110:intron 25.0%
!! GATTCCTTTTGTTGAAATTA+GGG + chr3_2:49487089-49487108 Msa0409110:intron 25.0%
! ACACACATTTACGAAATTTA+CGG + chr3_2:49487486-49487505 Msa0409110:intron 25.0%
! GAAAAATACAAATATCCAGT+CGG + chr3_2:49487586-49487605 Msa0409110:intron 25.0%
!! ACAAAAGTACACACAATAAA+GGG - chr3_2:49487708-49487727 None:intergenic 25.0%
!! TCATCTTTTTAAACACAACA+CGG - chr3_2:49487862-49487881 None:intergenic 25.0%
!!! ATTCTAAAATAAAGGGGAAA+CGG - chr3_2:49488092-49488111 None:intergenic 25.0%
!!! TCTGGTATTCTAAAATAAAG+GGG - chr3_2:49488098-49488117 None:intergenic 25.0%
!!! AATTTGTTGAAACTCTAATC+TGG - chr3_2:49488116-49488135 None:intergenic 25.0%
! GATTAGAGTTTCAACAAATT+TGG + chr3_2:49488116-49488135 Msa0409110:intron 25.0%
! AAAAACTGTAACAACAAACA+AGG - chr3_2:49488479-49488498 None:intergenic 25.0%
! ATTTCTCCTTATGTTGAATT+TGG + chr3_2:49488594-49488613 Msa0409110:intron 25.0%
! TTTCTCCTTATGTTGAATTT+GGG + chr3_2:49488595-49488614 Msa0409110:intron 25.0%
!! TGTTTTATGTATTGTAGAAG+AGG + chr3_2:49488789-49488808 Msa0409110:intron 25.0%
!! GTTTTATGTATTGTAGAAGA+GGG + chr3_2:49488790-49488809 Msa0409110:intron 25.0%
! TGACTACAGATTAATATGAA+AGG - chr3_2:49488934-49488953 None:intergenic 25.0%
! CATAAAACTATGCTTTATGT+TGG + chr3_2:49489121-49489140 Msa0409110:intron 25.0%
! TTTATGTTGGGTTTGAATAT+TGG + chr3_2:49489134-49489153 Msa0409110:intron 25.0%
! TTTGAATGTGTAAGATACTA+TGG + chr3_2:49489181-49489200 Msa0409110:intron 25.0%
!! CTTTTATGTGTATCATACTA+TGG + chr3_2:49489218-49489237 Msa0409110:intron 25.0%
!! TTTTCCAAACTTTAATGTAG+CGG + chr3_2:49489260-49489279 Msa0409110:intron 25.0%
! TCTAATCATGGAAAAATAGT+TGG - chr3_2:49489461-49489480 None:intergenic 25.0%
! AAAACTGTGCATCTAAAAAT+TGG + chr3_2:49489545-49489564 Msa0409110:intron 25.0%
! AAATATCAAATCCAACTTAG+TGG - chr3_2:49489714-49489733 None:intergenic 25.0%
! AATCACCAAACATTGAAATT+TGG + chr3_2:49489909-49489928 Msa0409110:intron 25.0%
!!! ATTTTAGCAAAATTTCAAGG+TGG + chr3_2:49489960-49489979 Msa0409110:intron 25.0%
!! TTTTAGCAAAATTTCAAGGT+GGG + chr3_2:49489961-49489980 Msa0409110:intron 25.0%
! GTTCAGATAATCAATTGATT+AGG + chr3_2:49490134-49490153 Msa0409110:intron 25.0%
!! AAAAGTATAATATCTATGGC+TGG - chr3_2:49490167-49490186 None:intergenic 25.0%
! TATGCTTCAAATATTCTGAT+GGG + chr3_2:49490396-49490415 Msa0409110:intron 25.0%
! GTGTTCTTAAAAATCAAAGT+TGG + chr3_2:49490431-49490450 Msa0409110:intron 25.0%
! CTATTACTGTATTACTTAGA+TGG - chr3_2:49490525-49490544 None:intergenic 25.0%
! CATCTAAGTAATACAGTAAT+AGG + chr3_2:49490523-49490542 Msa0409110:intron 25.0%
! AATAGTGCTATGGAAATTAT+AGG + chr3_2:49490547-49490566 Msa0409110:intron 25.0%
! AAAATGATTTAGCATGTGTT+TGG - chr3_2:49492105-49492124 None:intergenic 25.0%
!!! GATATTCTTGTTTTACCTTT+TGG + chr3_2:49492193-49492212 Msa0409110:intron 25.0%
! TTTGAGTAATGACATTTGTA+TGG + chr3_2:49492304-49492323 Msa0409110:intron 25.0%
! TTGAGTAATGACATTTGTAT+GGG + chr3_2:49492305-49492324 Msa0409110:intron 25.0%
!!! GAATACAATTTTTGGTCATT+AGG + chr3_2:49492368-49492387 Msa0409110:intron 25.0%
! AATCACACCAAAAAAAAGAA+TGG - chr3_2:49492960-49492979 None:intergenic 25.0%
! ATTTATTATCTAATTCCACC+TGG + chr3_2:49493064-49493083 Msa0409110:intron 25.0%
!! ATTCTATTTGTCACTTATGT+AGG - chr3_2:49493185-49493204 None:intergenic 25.0%
!! GATTCGACAAAATTTTACAT+TGG - chr3_2:49493245-49493264 None:intergenic 25.0%
! AAAACAGACTATTGCATATT+TGG - chr3_2:49493281-49493300 None:intergenic 25.0%
! GTGAAGAAATCATTAACAAT+AGG + chr3_2:49493322-49493341 Msa0409110:intron 25.0%
! TTTAGTACACAAATACACAA+TGG - chr3_2:49493685-49493704 None:intergenic 25.0%
ATGAACAACTCTTCTTCATT+CGG + chr3_2:49486131-49486150 Msa0409110:CDS 30.0%
TAAATACGTGATTAGGGTTA+TGG + chr3_2:49486358-49486377 Msa0409110:intron 30.0%
! AGGGTTATGGATTATGATTA+AGG + chr3_2:49486371-49486390 Msa0409110:intron 30.0%
! TTGTGTTGTTATGTGTTGAA+AGG + chr3_2:49486579-49486598 Msa0409110:intron 30.0%
! TATGTGTTGAAAGGTTGATT+TGG + chr3_2:49486588-49486607 Msa0409110:intron 30.0%
!!! GGGTTTTGTTAGTTAATTGT+TGG + chr3_2:49486660-49486679 Msa0409110:intron 30.0%
TTAAGTTACTTCTTGTGCTA+GGG + chr3_2:49487207-49487226 Msa0409110:intron 30.0%
! AGTTTTCTTACATACTAGAC+TGG - chr3_2:49487416-49487435 None:intergenic 30.0%
! CAAAAGCATGCACAATAAAT+GGG - chr3_2:49487518-49487537 None:intergenic 30.0%
! ACAAAAGCATGCACAATAAA+TGG - chr3_2:49487519-49487538 None:intergenic 30.0%
! TTGTAATTTTGAACGTGATC+TGG + chr3_2:49487535-49487554 Msa0409110:intron 30.0%
! CAAAAGTACACACAATAAAG+GGG - chr3_2:49487707-49487726 None:intergenic 30.0%
! CACAAAAGTACACACAATAA+AGG - chr3_2:49487709-49487728 None:intergenic 30.0%
TTTGGATTGAAAACAAAGTG+CGG + chr3_2:49488134-49488153 Msa0409110:intron 30.0%
!!! TTTTTTGTTAATGCGAGGTT+AGG + chr3_2:49488262-49488281 Msa0409110:intron 30.0%
TTAATATCTTGTTGCAGAGA+TGG + chr3_2:49488296-49488315 Msa0409110:intron 30.0%
TTCTCCTTATGTTGAATTTG+GGG + chr3_2:49488596-49488615 Msa0409110:intron 30.0%
! TATATCACGATGATTTGTCT+TGG + chr3_2:49488718-49488737 Msa0409110:intron 30.0%
AAATGAATTCCATAGCAATG+GGG - chr3_2:49488834-49488853 None:intergenic 30.0%
CAAATGAATTCCATAGCAAT+GGG - chr3_2:49488835-49488854 None:intergenic 30.0%
ATAAGCTCAACAATAGAGAT+AGG - chr3_2:49488901-49488920 None:intergenic 30.0%
CTCAAAAATGCAAATCAACA+GGG - chr3_2:49488982-49489001 None:intergenic 30.0%
ACTCAAAAATGCAAATCAAC+AGG - chr3_2:49488983-49489002 None:intergenic 30.0%
TTACCAAAACGAAGAAATAG+GGG - chr3_2:49489419-49489438 None:intergenic 30.0%
GTTACCAAAACGAAGAAATA+GGG - chr3_2:49489420-49489439 None:intergenic 30.0%
! TTTCAAAGTTGGTCTAATCA+TGG - chr3_2:49489473-49489492 None:intergenic 30.0%
GATGTCCAAATTTCAATGTT+TGG - chr3_2:49489917-49489936 None:intergenic 30.0%
GTAAGAAAACAAGAGAAGAA+GGG - chr3_2:49490267-49490286 None:intergenic 30.0%
TGTAAGAAAACAAGAGAAGA+AGG - chr3_2:49490268-49490287 None:intergenic 30.0%
AGAAAGTAACATTACCATTC+AGG - chr3_2:49490327-49490346 None:intergenic 30.0%
CTATGCTTCAAATATTCTGA+TGG + chr3_2:49490395-49490414 Msa0409110:intron 30.0%
! TGTATTTTGCTGAAATGCTT+TGG + chr3_2:49490459-49490478 Msa0409110:intron 30.0%
! GTATTTTGCTGAAATGCTTT+GGG + chr3_2:49490460-49490479 Msa0409110:intron 30.0%
CTGTATTACTTAGATGGAAA+TGG - chr3_2:49490519-49490538 None:intergenic 30.0%
AGTAATAGGAAATAGTGCTA+TGG + chr3_2:49490537-49490556 Msa0409110:intron 30.0%
CTATGGAAATTATAGGATTG+AGG + chr3_2:49490554-49490573 Msa0409110:intron 30.0%
AATGATTGATCACATCAACT+TGG - chr3_2:49490613-49490632 None:intergenic 30.0%
! GTTTGAATTGTCCACATTTT+TGG + chr3_2:49490665-49490684 Msa0409110:intron 30.0%
TCATGCAGACTGATATAATA+TGG + chr3_2:49490811-49490830 Msa0409110:intron 30.0%
!! CAGAAAAGCAATTTGTTAGA+TGG - chr3_2:49490852-49490871 None:intergenic 30.0%
TGGGGTAACCTTTAAATAAT+AGG - chr3_2:49490973-49490992 None:intergenic 30.0%
AATTCAAAAGCAACAAGGAA+AGG - chr3_2:49491028-49491047 None:intergenic 30.0%
TTGAATGTCAAAAGATCCAT+TGG + chr3_2:49491154-49491173 Msa0409110:intron 30.0%
! GGATTTTGTGATGAATCTTT+TGG - chr3_2:49491478-49491497 None:intergenic 30.0%
AATTCATCCAAACAAGTTGT+TGG - chr3_2:49491532-49491551 None:intergenic 30.0%
AATGTTAATCGAACATTGAC+AGG - chr3_2:49491895-49491914 None:intergenic 30.0%
TGACTTTAAACATGTAGTAG+CGG - chr3_2:49492005-49492024 None:intergenic 30.0%
TTTGGAAACTAACAAAACCA+AGG - chr3_2:49492087-49492106 None:intergenic 30.0%
AGTGGCAACATAAAATAAAC+TGG - chr3_2:49492432-49492451 None:intergenic 30.0%
! TAATGATGGCATTTGAAACT+TGG - chr3_2:49492811-49492830 None:intergenic 30.0%
ACCAAGAGTTTGATTAATGA+TGG - chr3_2:49492825-49492844 None:intergenic 30.0%
ACACCAAAAAAAAGAATGGA+GGG - chr3_2:49492956-49492975 None:intergenic 30.0%
TTTATTGCAGAGAAAAAACC+AGG - chr3_2:49493085-49493104 None:intergenic 30.0%
TAAGTGACAAATAGAATCAG+AGG + chr3_2:49493188-49493207 Msa0409110:intron 30.0%
AAGTGACAAATAGAATCAGA+GGG + chr3_2:49493189-49493208 Msa0409110:intron 30.0%
! AAATTTTACATTGGATGTCG+AGG - chr3_2:49493236-49493255 None:intergenic 30.0%
!!! CTGTTTTTTGTTGAGTGAAA+TGG + chr3_2:49493294-49493313 Msa0409110:intron 30.0%
! CAGCTCTAACATTAAAGATT+TGG - chr3_2:49493389-49493408 None:intergenic 30.0%
!!! GTTTTTTCAAAGTGACTGAA+TGG - chr3_2:49493420-49493439 None:intergenic 30.0%
!!! TTTGGTTTTGTTTATTCAGG+AGG + chr3_2:49493473-49493492 Msa0409110:intron 30.0%
GGTGAATTGAGTATAAACTA+TGG + chr3_2:49493593-49493612 Msa0409110:three_prime_UTR 30.0%
ATGAACAACTCTTCTTCATT+CGG + chr3_2:49486131-49486150 Msa0409110:CDS 30.0%
TAAATACGTGATTAGGGTTA+TGG + chr3_2:49486358-49486377 Msa0409110:intron 30.0%
! AGGGTTATGGATTATGATTA+AGG + chr3_2:49486371-49486390 Msa0409110:intron 30.0%
! TTGTGTTGTTATGTGTTGAA+AGG + chr3_2:49486579-49486598 Msa0409110:intron 30.0%
! TATGTGTTGAAAGGTTGATT+TGG + chr3_2:49486588-49486607 Msa0409110:intron 30.0%
!!! GGGTTTTGTTAGTTAATTGT+TGG + chr3_2:49486660-49486679 Msa0409110:intron 30.0%
TTAAGTTACTTCTTGTGCTA+GGG + chr3_2:49487207-49487226 Msa0409110:intron 30.0%
! AGTTTTCTTACATACTAGAC+TGG - chr3_2:49487416-49487435 None:intergenic 30.0%
! CAAAAGCATGCACAATAAAT+GGG - chr3_2:49487518-49487537 None:intergenic 30.0%
! ACAAAAGCATGCACAATAAA+TGG - chr3_2:49487519-49487538 None:intergenic 30.0%
! TTGTAATTTTGAACGTGATC+TGG + chr3_2:49487535-49487554 Msa0409110:intron 30.0%
! CAAAAGTACACACAATAAAG+GGG - chr3_2:49487707-49487726 None:intergenic 30.0%
! CACAAAAGTACACACAATAA+AGG - chr3_2:49487709-49487728 None:intergenic 30.0%
TTTGGATTGAAAACAAAGTG+CGG + chr3_2:49488134-49488153 Msa0409110:intron 30.0%
!!! TTTTTTGTTAATGCGAGGTT+AGG + chr3_2:49488262-49488281 Msa0409110:intron 30.0%
TTAATATCTTGTTGCAGAGA+TGG + chr3_2:49488296-49488315 Msa0409110:intron 30.0%
TTCTCCTTATGTTGAATTTG+GGG + chr3_2:49488596-49488615 Msa0409110:intron 30.0%
! TATATCACGATGATTTGTCT+TGG + chr3_2:49488718-49488737 Msa0409110:intron 30.0%
AAATGAATTCCATAGCAATG+GGG - chr3_2:49488834-49488853 None:intergenic 30.0%
CAAATGAATTCCATAGCAAT+GGG - chr3_2:49488835-49488854 None:intergenic 30.0%
ATAAGCTCAACAATAGAGAT+AGG - chr3_2:49488901-49488920 None:intergenic 30.0%
CTCAAAAATGCAAATCAACA+GGG - chr3_2:49488982-49489001 None:intergenic 30.0%
ACTCAAAAATGCAAATCAAC+AGG - chr3_2:49488983-49489002 None:intergenic 30.0%
TTACCAAAACGAAGAAATAG+GGG - chr3_2:49489419-49489438 None:intergenic 30.0%
GTTACCAAAACGAAGAAATA+GGG - chr3_2:49489420-49489439 None:intergenic 30.0%
! TTTCAAAGTTGGTCTAATCA+TGG - chr3_2:49489473-49489492 None:intergenic 30.0%
GATGTCCAAATTTCAATGTT+TGG - chr3_2:49489917-49489936 None:intergenic 30.0%
GTAAGAAAACAAGAGAAGAA+GGG - chr3_2:49490267-49490286 None:intergenic 30.0%
TGTAAGAAAACAAGAGAAGA+AGG - chr3_2:49490268-49490287 None:intergenic 30.0%
AGAAAGTAACATTACCATTC+AGG - chr3_2:49490327-49490346 None:intergenic 30.0%
CTATGCTTCAAATATTCTGA+TGG + chr3_2:49490395-49490414 Msa0409110:intron 30.0%
! TGTATTTTGCTGAAATGCTT+TGG + chr3_2:49490459-49490478 Msa0409110:intron 30.0%
! GTATTTTGCTGAAATGCTTT+GGG + chr3_2:49490460-49490479 Msa0409110:intron 30.0%
CTGTATTACTTAGATGGAAA+TGG - chr3_2:49490519-49490538 None:intergenic 30.0%
AGTAATAGGAAATAGTGCTA+TGG + chr3_2:49490537-49490556 Msa0409110:intron 30.0%
CTATGGAAATTATAGGATTG+AGG + chr3_2:49490554-49490573 Msa0409110:intron 30.0%
AATGATTGATCACATCAACT+TGG - chr3_2:49490613-49490632 None:intergenic 30.0%
! GTTTGAATTGTCCACATTTT+TGG + chr3_2:49490665-49490684 Msa0409110:intron 30.0%
TCATGCAGACTGATATAATA+TGG + chr3_2:49490811-49490830 Msa0409110:intron 30.0%
!! CAGAAAAGCAATTTGTTAGA+TGG - chr3_2:49490852-49490871 None:intergenic 30.0%
TGGGGTAACCTTTAAATAAT+AGG - chr3_2:49490973-49490992 None:intergenic 30.0%
AATTCAAAAGCAACAAGGAA+AGG - chr3_2:49491028-49491047 None:intergenic 30.0%
TTGAATGTCAAAAGATCCAT+TGG + chr3_2:49491154-49491173 Msa0409110:intron 30.0%
! GGATTTTGTGATGAATCTTT+TGG - chr3_2:49491478-49491497 None:intergenic 30.0%
AATTCATCCAAACAAGTTGT+TGG - chr3_2:49491532-49491551 None:intergenic 30.0%
AATGTTAATCGAACATTGAC+AGG - chr3_2:49491895-49491914 None:intergenic 30.0%
TGACTTTAAACATGTAGTAG+CGG - chr3_2:49492005-49492024 None:intergenic 30.0%
TTTGGAAACTAACAAAACCA+AGG - chr3_2:49492087-49492106 None:intergenic 30.0%
AGTGGCAACATAAAATAAAC+TGG - chr3_2:49492432-49492451 None:intergenic 30.0%
! TAATGATGGCATTTGAAACT+TGG - chr3_2:49492811-49492830 None:intergenic 30.0%
ACCAAGAGTTTGATTAATGA+TGG - chr3_2:49492825-49492844 None:intergenic 30.0%
ACACCAAAAAAAAGAATGGA+GGG - chr3_2:49492956-49492975 None:intergenic 30.0%
TTTATTGCAGAGAAAAAACC+AGG - chr3_2:49493085-49493104 None:intergenic 30.0%
TAAGTGACAAATAGAATCAG+AGG + chr3_2:49493188-49493207 Msa0409110:intron 30.0%
AAGTGACAAATAGAATCAGA+GGG + chr3_2:49493189-49493208 Msa0409110:intron 30.0%
! AAATTTTACATTGGATGTCG+AGG - chr3_2:49493236-49493255 None:intergenic 30.0%
!!! CTGTTTTTTGTTGAGTGAAA+TGG + chr3_2:49493294-49493313 Msa0409110:intron 30.0%
! CAGCTCTAACATTAAAGATT+TGG - chr3_2:49493389-49493408 None:intergenic 30.0%
!!! GTTTTTTCAAAGTGACTGAA+TGG - chr3_2:49493420-49493439 None:intergenic 30.0%
!!! TTTGGTTTTGTTTATTCAGG+AGG + chr3_2:49493473-49493492 Msa0409110:intron 30.0%
GGTGAATTGAGTATAAACTA+TGG + chr3_2:49493593-49493612 Msa0409110:three_prime_UTR 30.0%
GTTGTTCATAGAAGAAGACA+CGG - chr3_2:49486120-49486139 None:intergenic 35.0%
TGATGAAGAAGATGATACCT+TGG - chr3_2:49486264-49486283 None:intergenic 35.0%
TGAAATACAGAAATGAGCAC+TGG + chr3_2:49486689-49486708 Msa0409110:intron 35.0%
! GTAATATCATGTGGTAGTGT+CGG + chr3_2:49486772-49486791 Msa0409110:intron 35.0%
CTGATCAAATTCATCTCTAG+TGG - chr3_2:49486798-49486817 None:intergenic 35.0%
! AATTTTGTGGGAGTGAGAAT+TGG + chr3_2:49487029-49487048 Msa0409110:intron 35.0%
GCAACCCTAATTTCAACAAA+AGG - chr3_2:49487096-49487115 None:intergenic 35.0%
TTGTTGAAATTAGGGTTGCA+TGG + chr3_2:49487097-49487116 Msa0409110:intron 35.0%
TGTTGAAATTAGGGTTGCAT+GGG + chr3_2:49487098-49487117 Msa0409110:intron 35.0%
GTTAAGTTACTTCTTGTGCT+AGG + chr3_2:49487206-49487225 Msa0409110:intron 35.0%
! GTGCGTTACAGATTTTCAAA+GGG + chr3_2:49487364-49487383 Msa0409110:intron 35.0%
GTGATCTGGATTGTCAAAAT+GGG + chr3_2:49487549-49487568 Msa0409110:intron 35.0%
!!! AGTTTTGTTACATATCCGAC+TGG - chr3_2:49487604-49487623 None:intergenic 35.0%
! ATGCACAATTACCAGTTTTG+CGG + chr3_2:49487674-49487693 Msa0409110:intron 35.0%
GTGATCTTGATTGTCAAAGT+TGG + chr3_2:49487738-49487757 Msa0409110:intron 35.0%
AAGTTGGCAATCCTTCTTAA+AGG + chr3_2:49487754-49487773 Msa0409110:intron 35.0%
! ACTGTCGTGTTTTGTAACAA+CGG - chr3_2:49487808-49487827 None:intergenic 35.0%
TGATTGAGAGGGTAAGTAAA+AGG - chr3_2:49488215-49488234 None:intergenic 35.0%
TCCAGTAAATGTGATTGAGA+GGG - chr3_2:49488226-49488245 None:intergenic 35.0%
ATCCAGTAAATGTGATTGAG+AGG - chr3_2:49488227-49488246 None:intergenic 35.0%
!! TCTTTCTACTTTTCTCTCGA+AGG - chr3_2:49488503-49488522 None:intergenic 35.0%
TTCGAGAGAAAAGTAGAAAG+AGG + chr3_2:49488502-49488521 Msa0409110:intron 35.0%
AAACAGATTCTCACTCAAAC+GGG - chr3_2:49488552-49488571 None:intergenic 35.0%
GAAACAGATTCTCACTCAAA+CGG - chr3_2:49488553-49488572 None:intergenic 35.0%
TGAGTGAGAATCTGTTTCAA+TGG + chr3_2:49488555-49488574 Msa0409110:intron 35.0%
AGAATCTGTTTCAATGGCTT+TGG + chr3_2:49488561-49488580 Msa0409110:intron 35.0%
GTAACCCCAAATTCAACATA+AGG - chr3_2:49488603-49488622 None:intergenic 35.0%
! ATGTTGAATTTGGGGTTACA+TGG + chr3_2:49488604-49488623 Msa0409110:intron 35.0%
! TGTTGAATTTGGGGTTACAT+GGG + chr3_2:49488605-49488624 Msa0409110:intron 35.0%
TGTCTTGGTTTCTGTTTGTT+TGG + chr3_2:49488733-49488752 Msa0409110:intron 35.0%
CCAAATGAATTCCATAGCAA+TGG - chr3_2:49488836-49488855 None:intergenic 35.0%
CCATTGCTATGGAATTCATT+TGG + chr3_2:49488833-49488852 Msa0409110:CDS 35.0%
TGAGTAGCAGCAAAATATTG+TGG + chr3_2:49488998-49489017 Msa0409110:intron 35.0%
!! GGGCATATTTGGAATTTTAC+AGG - chr3_2:49489040-49489059 None:intergenic 35.0%
! CTATAAGTTGAGGGCATATT+TGG - chr3_2:49489051-49489070 None:intergenic 35.0%
AAAGAAACAAAAGGGAACAC+CGG - chr3_2:49489079-49489098 None:intergenic 35.0%
AGTACCGCTACATTAAAGTT+TGG - chr3_2:49489267-49489286 None:intergenic 35.0%
TACCAAAACGAAGAAATAGG+GGG - chr3_2:49489418-49489437 None:intergenic 35.0%
GGTTACCAAAACGAAGAAAT+AGG - chr3_2:49489421-49489440 None:intergenic 35.0%
TGGTAACCTGTTGTTATACT+TGG + chr3_2:49489433-49489452 Msa0409110:intron 35.0%
TTGGAACCAAGTATAACAAC+AGG - chr3_2:49489442-49489461 None:intergenic 35.0%
AAGATATAAAGCAGACTGAG+GGG - chr3_2:49489653-49489672 None:intergenic 35.0%
GAAGATATAAAGCAGACTGA+GGG - chr3_2:49489654-49489673 None:intergenic 35.0%
TATCAAATCCAACTTAGTGG+AGG - chr3_2:49489711-49489730 None:intergenic 35.0%
TTAGACAAACTCATCTAACC+TGG - chr3_2:49489836-49489855 None:intergenic 35.0%
! TCAAATATTCTGATGGGTGT+TGG + chr3_2:49490402-49490421 Msa0409110:intron 35.0%
TTATAGGATTGAGGTAAGCA+TGG + chr3_2:49490563-49490582 Msa0409110:intron 35.0%
! GATCAATCATTGACTGCATA+TGG + chr3_2:49490622-49490641 Msa0409110:intron 35.0%
! ATATGGATGAAGGATTTGCT+GGG + chr3_2:49490639-49490658 Msa0409110:intron 35.0%
TCATGCATCAACCAAAAATG+TGG - chr3_2:49490679-49490698 None:intergenic 35.0%
CATGACTATGCCTACTAAAA+CGG - chr3_2:49491005-49491024 None:intergenic 35.0%
ATCTGATTTCCAAAAGCTTC+TGG - chr3_2:49491091-49491110 None:intergenic 35.0%
!! AGAAGCTTTTGGAAATCAGA+TGG + chr3_2:49491090-49491109 Msa0409110:intron 35.0%
TTCCTTACTCATTCTGATGT+TGG + chr3_2:49491367-49491386 Msa0409110:intron 35.0%
TCCTTACTCATTCTGATGTT+GGG + chr3_2:49491368-49491387 Msa0409110:intron 35.0%
AATGTAACCGTAGGAAATGT+AGG - chr3_2:49491414-49491433 None:intergenic 35.0%
TGCAGTAAAAATGTAACCGT+AGG - chr3_2:49491423-49491442 None:intergenic 35.0%
CATTATAAAGAGTTGTGTCG+AGG - chr3_2:49491499-49491518 None:intergenic 35.0%
CTCGACACAACTCTTTATAA+TGG + chr3_2:49491497-49491516 Msa0409110:intron 35.0%
! TGAAAGTCCAACAACTTGTT+TGG + chr3_2:49491522-49491541 Msa0409110:intron 35.0%
TGATTCTTGATTGTCTGTCT+TGG + chr3_2:49491809-49491828 Msa0409110:intron 35.0%
GATTCTTGATTGTCTGTCTT+GGG + chr3_2:49491810-49491829 Msa0409110:intron 35.0%
GGGTAAATTTATGCAAACAC+AGG + chr3_2:49491830-49491849 Msa0409110:intron 35.0%
GAACATTGACAGGAAAAATG+TGG - chr3_2:49491885-49491904 None:intergenic 35.0%
TAAGTGCTTGTTTGTTTGTG+CGG + chr3_2:49491972-49491991 Msa0409110:intron 35.0%
! GTTTAAAGTCAATCTCATCG+TGG + chr3_2:49492014-49492033 Msa0409110:intron 35.0%
CTAACAAAACCAAGGTGAAA+AGG - chr3_2:49492079-49492098 None:intergenic 35.0%
TGGGATTGTTTAAACTTTGC+TGG + chr3_2:49492252-49492271 Msa0409110:intron 35.0%
GGGATTGTTTAAACTTTGCT+GGG + chr3_2:49492253-49492272 Msa0409110:intron 35.0%
GGATTGTTTAAACTTTGCTG+GGG + chr3_2:49492254-49492273 Msa0409110:intron 35.0%
! TATTTTATGTTGCCACTGTC+TGG + chr3_2:49492435-49492454 Msa0409110:intron 35.0%
AAAGATTCTGTTAGACGATG+TGG + chr3_2:49492550-49492569 Msa0409110:CDS 35.0%
AAGATTCTGTTAGACGATGT+GGG + chr3_2:49492551-49492570 Msa0409110:CDS 35.0%
!! ATAACCCGAGGTTTGTTAAT+AGG + chr3_2:49492711-49492730 Msa0409110:intron 35.0%
CAATCCTATTAACAAACCTC+GGG - chr3_2:49492718-49492737 None:intergenic 35.0%
GCAATCCTATTAACAAACCT+CGG - chr3_2:49492719-49492738 None:intergenic 35.0%
! ATTTGAAACTTGGCAGGAAA+GGG - chr3_2:49492801-49492820 None:intergenic 35.0%
GCCATCATTAATCAAACTCT+TGG + chr3_2:49492821-49492840 Msa0409110:intron 35.0%
!! ACTCTTGGTCTTGTTAAATC+AGG + chr3_2:49492836-49492855 Msa0409110:intron 35.0%
!! CTCTTGGTCTTGTTAAATCA+GGG + chr3_2:49492837-49492856 Msa0409110:intron 35.0%
!!! ACTCCCTCCATTCTTTTTTT+TGG + chr3_2:49492950-49492969 Msa0409110:intron 35.0%
CACACCAAAAAAAAGAATGG+AGG - chr3_2:49492957-49492976 None:intergenic 35.0%
TTTGTCGAATCTCTATGACT+TGG + chr3_2:49493254-49493273 Msa0409110:intron 35.0%
TAACAATAGGTCCAAGAGAA+AGG + chr3_2:49493335-49493354 Msa0409110:intron 35.0%
! CAACAACTGATTCACAATGT+TGG + chr3_2:49493519-49493538 Msa0409110:exon 35.0%
! AACTGATTCACAATGTTGGA+GGG + chr3_2:49493523-49493542 Msa0409110:exon 35.0%
!! AGGAGGTTTTGATCATCTAA+TGG + chr3_2:49493572-49493591 Msa0409110:three_prime_UTR 35.0%
GTTGTTCATAGAAGAAGACA+CGG - chr3_2:49486120-49486139 None:intergenic 35.0%
TGATGAAGAAGATGATACCT+TGG - chr3_2:49486264-49486283 None:intergenic 35.0%
TGAAATACAGAAATGAGCAC+TGG + chr3_2:49486689-49486708 Msa0409110:intron 35.0%
! GTAATATCATGTGGTAGTGT+CGG + chr3_2:49486772-49486791 Msa0409110:intron 35.0%
CTGATCAAATTCATCTCTAG+TGG - chr3_2:49486798-49486817 None:intergenic 35.0%
! AATTTTGTGGGAGTGAGAAT+TGG + chr3_2:49487029-49487048 Msa0409110:intron 35.0%
GCAACCCTAATTTCAACAAA+AGG - chr3_2:49487096-49487115 None:intergenic 35.0%
TTGTTGAAATTAGGGTTGCA+TGG + chr3_2:49487097-49487116 Msa0409110:intron 35.0%
TGTTGAAATTAGGGTTGCAT+GGG + chr3_2:49487098-49487117 Msa0409110:intron 35.0%
GTTAAGTTACTTCTTGTGCT+AGG + chr3_2:49487206-49487225 Msa0409110:intron 35.0%
! GTGCGTTACAGATTTTCAAA+GGG + chr3_2:49487364-49487383 Msa0409110:intron 35.0%
GTGATCTGGATTGTCAAAAT+GGG + chr3_2:49487549-49487568 Msa0409110:intron 35.0%
!!! AGTTTTGTTACATATCCGAC+TGG - chr3_2:49487604-49487623 None:intergenic 35.0%
! ATGCACAATTACCAGTTTTG+CGG + chr3_2:49487674-49487693 Msa0409110:intron 35.0%
GTGATCTTGATTGTCAAAGT+TGG + chr3_2:49487738-49487757 Msa0409110:intron 35.0%
AAGTTGGCAATCCTTCTTAA+AGG + chr3_2:49487754-49487773 Msa0409110:intron 35.0%
! ACTGTCGTGTTTTGTAACAA+CGG - chr3_2:49487808-49487827 None:intergenic 35.0%
TGATTGAGAGGGTAAGTAAA+AGG - chr3_2:49488215-49488234 None:intergenic 35.0%
TCCAGTAAATGTGATTGAGA+GGG - chr3_2:49488226-49488245 None:intergenic 35.0%
ATCCAGTAAATGTGATTGAG+AGG - chr3_2:49488227-49488246 None:intergenic 35.0%
!! TCTTTCTACTTTTCTCTCGA+AGG - chr3_2:49488503-49488522 None:intergenic 35.0%
TTCGAGAGAAAAGTAGAAAG+AGG + chr3_2:49488502-49488521 Msa0409110:intron 35.0%
AAACAGATTCTCACTCAAAC+GGG - chr3_2:49488552-49488571 None:intergenic 35.0%
GAAACAGATTCTCACTCAAA+CGG - chr3_2:49488553-49488572 None:intergenic 35.0%
TGAGTGAGAATCTGTTTCAA+TGG + chr3_2:49488555-49488574 Msa0409110:intron 35.0%
AGAATCTGTTTCAATGGCTT+TGG + chr3_2:49488561-49488580 Msa0409110:intron 35.0%
GTAACCCCAAATTCAACATA+AGG - chr3_2:49488603-49488622 None:intergenic 35.0%
! ATGTTGAATTTGGGGTTACA+TGG + chr3_2:49488604-49488623 Msa0409110:intron 35.0%
! TGTTGAATTTGGGGTTACAT+GGG + chr3_2:49488605-49488624 Msa0409110:intron 35.0%
TGTCTTGGTTTCTGTTTGTT+TGG + chr3_2:49488733-49488752 Msa0409110:intron 35.0%
CCAAATGAATTCCATAGCAA+TGG - chr3_2:49488836-49488855 None:intergenic 35.0%
CCATTGCTATGGAATTCATT+TGG + chr3_2:49488833-49488852 Msa0409110:CDS 35.0%
TGAGTAGCAGCAAAATATTG+TGG + chr3_2:49488998-49489017 Msa0409110:intron 35.0%
!! GGGCATATTTGGAATTTTAC+AGG - chr3_2:49489040-49489059 None:intergenic 35.0%
! CTATAAGTTGAGGGCATATT+TGG - chr3_2:49489051-49489070 None:intergenic 35.0%
AAAGAAACAAAAGGGAACAC+CGG - chr3_2:49489079-49489098 None:intergenic 35.0%
AGTACCGCTACATTAAAGTT+TGG - chr3_2:49489267-49489286 None:intergenic 35.0%
TACCAAAACGAAGAAATAGG+GGG - chr3_2:49489418-49489437 None:intergenic 35.0%
GGTTACCAAAACGAAGAAAT+AGG - chr3_2:49489421-49489440 None:intergenic 35.0%
TGGTAACCTGTTGTTATACT+TGG + chr3_2:49489433-49489452 Msa0409110:intron 35.0%
TTGGAACCAAGTATAACAAC+AGG - chr3_2:49489442-49489461 None:intergenic 35.0%
AAGATATAAAGCAGACTGAG+GGG - chr3_2:49489653-49489672 None:intergenic 35.0%
GAAGATATAAAGCAGACTGA+GGG - chr3_2:49489654-49489673 None:intergenic 35.0%
TATCAAATCCAACTTAGTGG+AGG - chr3_2:49489711-49489730 None:intergenic 35.0%
TTAGACAAACTCATCTAACC+TGG - chr3_2:49489836-49489855 None:intergenic 35.0%
! TCAAATATTCTGATGGGTGT+TGG + chr3_2:49490402-49490421 Msa0409110:intron 35.0%
TTATAGGATTGAGGTAAGCA+TGG + chr3_2:49490563-49490582 Msa0409110:intron 35.0%
! GATCAATCATTGACTGCATA+TGG + chr3_2:49490622-49490641 Msa0409110:intron 35.0%
! ATATGGATGAAGGATTTGCT+GGG + chr3_2:49490639-49490658 Msa0409110:intron 35.0%
TCATGCATCAACCAAAAATG+TGG - chr3_2:49490679-49490698 None:intergenic 35.0%
CATGACTATGCCTACTAAAA+CGG - chr3_2:49491005-49491024 None:intergenic 35.0%
ATCTGATTTCCAAAAGCTTC+TGG - chr3_2:49491091-49491110 None:intergenic 35.0%
!! AGAAGCTTTTGGAAATCAGA+TGG + chr3_2:49491090-49491109 Msa0409110:intron 35.0%
TTCCTTACTCATTCTGATGT+TGG + chr3_2:49491367-49491386 Msa0409110:intron 35.0%
TCCTTACTCATTCTGATGTT+GGG + chr3_2:49491368-49491387 Msa0409110:intron 35.0%
AATGTAACCGTAGGAAATGT+AGG - chr3_2:49491414-49491433 None:intergenic 35.0%
TGCAGTAAAAATGTAACCGT+AGG - chr3_2:49491423-49491442 None:intergenic 35.0%
CATTATAAAGAGTTGTGTCG+AGG - chr3_2:49491499-49491518 None:intergenic 35.0%
CTCGACACAACTCTTTATAA+TGG + chr3_2:49491497-49491516 Msa0409110:intron 35.0%
! TGAAAGTCCAACAACTTGTT+TGG + chr3_2:49491522-49491541 Msa0409110:intron 35.0%
TGATTCTTGATTGTCTGTCT+TGG + chr3_2:49491809-49491828 Msa0409110:intron 35.0%
GATTCTTGATTGTCTGTCTT+GGG + chr3_2:49491810-49491829 Msa0409110:intron 35.0%
GGGTAAATTTATGCAAACAC+AGG + chr3_2:49491830-49491849 Msa0409110:intron 35.0%
GAACATTGACAGGAAAAATG+TGG - chr3_2:49491885-49491904 None:intergenic 35.0%
TAAGTGCTTGTTTGTTTGTG+CGG + chr3_2:49491972-49491991 Msa0409110:intron 35.0%
! GTTTAAAGTCAATCTCATCG+TGG + chr3_2:49492014-49492033 Msa0409110:intron 35.0%
CTAACAAAACCAAGGTGAAA+AGG - chr3_2:49492079-49492098 None:intergenic 35.0%
TGGGATTGTTTAAACTTTGC+TGG + chr3_2:49492252-49492271 Msa0409110:intron 35.0%
GGGATTGTTTAAACTTTGCT+GGG + chr3_2:49492253-49492272 Msa0409110:intron 35.0%
GGATTGTTTAAACTTTGCTG+GGG + chr3_2:49492254-49492273 Msa0409110:intron 35.0%
! TATTTTATGTTGCCACTGTC+TGG + chr3_2:49492435-49492454 Msa0409110:intron 35.0%
AAAGATTCTGTTAGACGATG+TGG + chr3_2:49492550-49492569 Msa0409110:CDS 35.0%
AAGATTCTGTTAGACGATGT+GGG + chr3_2:49492551-49492570 Msa0409110:CDS 35.0%
!! ATAACCCGAGGTTTGTTAAT+AGG + chr3_2:49492711-49492730 Msa0409110:intron 35.0%
CAATCCTATTAACAAACCTC+GGG - chr3_2:49492718-49492737 None:intergenic 35.0%
GCAATCCTATTAACAAACCT+CGG - chr3_2:49492719-49492738 None:intergenic 35.0%
! ATTTGAAACTTGGCAGGAAA+GGG - chr3_2:49492801-49492820 None:intergenic 35.0%
GCCATCATTAATCAAACTCT+TGG + chr3_2:49492821-49492840 Msa0409110:intron 35.0%
!! ACTCTTGGTCTTGTTAAATC+AGG + chr3_2:49492836-49492855 Msa0409110:intron 35.0%
!! CTCTTGGTCTTGTTAAATCA+GGG + chr3_2:49492837-49492856 Msa0409110:intron 35.0%
!!! ACTCCCTCCATTCTTTTTTT+TGG + chr3_2:49492950-49492969 Msa0409110:intron 35.0%
CACACCAAAAAAAAGAATGG+AGG - chr3_2:49492957-49492976 None:intergenic 35.0%
TTTGTCGAATCTCTATGACT+TGG + chr3_2:49493254-49493273 Msa0409110:intron 35.0%
TAACAATAGGTCCAAGAGAA+AGG + chr3_2:49493335-49493354 Msa0409110:intron 35.0%
! CAACAACTGATTCACAATGT+TGG + chr3_2:49493519-49493538 Msa0409110:exon 35.0%
! AACTGATTCACAATGTTGGA+GGG + chr3_2:49493523-49493542 Msa0409110:exon 35.0%
!! AGGAGGTTTTGATCATCTAA+TGG + chr3_2:49493572-49493591 Msa0409110:three_prime_UTR 35.0%
! ATAGAAGAAGACACGGATTG+GGG - chr3_2:49486113-49486132 None:intergenic 40.0%
CATAGAAGAAGACACGGATT+GGG - chr3_2:49486114-49486133 None:intergenic 40.0%
TCATAGAAGAAGACACGGAT+TGG - chr3_2:49486115-49486134 None:intergenic 40.0%
GACACATGAAACTAAGAAGC+TGG + chr3_2:49486430-49486449 Msa0409110:intron 40.0%
ATCTCAACACTTCTGATCGA+AGG - chr3_2:49486537-49486556 None:intergenic 40.0%
! GGAGTGAGAATTGGTTTCAA+TGG + chr3_2:49487038-49487057 Msa0409110:intron 40.0%
! CGTGCGTTACAGATTTTCAA+AGG + chr3_2:49487363-49487382 Msa0409110:intron 40.0%
!! ACAAATGTTTAGCTTGTGCG+TGG + chr3_2:49487436-49487455 Msa0409110:intron 40.0%
!! CAAATGTTTAGCTTGTGCGT+GGG + chr3_2:49487437-49487456 Msa0409110:intron 40.0%
!! AAATGTTTAGCTTGTGCGTG+GGG + chr3_2:49487438-49487457 Msa0409110:intron 40.0%
CGTGATCTGGATTGTCAAAA+TGG + chr3_2:49487548-49487567 Msa0409110:intron 40.0%
GCAAAACTGGTAATTGTGCA+TGG - chr3_2:49487675-49487694 None:intergenic 40.0%
! GTGCATTTTCAATGTCGTCA+GGG - chr3_2:49488048-49488067 None:intergenic 40.0%
! AGTGCATTTTCAATGTCGTC+AGG - chr3_2:49488049-49488068 None:intergenic 40.0%
ACATCTGATGTGTTGAGATG+CGG - chr3_2:49488184-49488203 None:intergenic 40.0%
AGGGTAAGTAAAAGGTTGTG+GGG - chr3_2:49488207-49488226 None:intergenic 40.0%
GAGGGTAAGTAAAAGGTTGT+GGG - chr3_2:49488208-49488227 None:intergenic 40.0%
AGAGGGTAAGTAAAAGGTTG+TGG - chr3_2:49488209-49488228 None:intergenic 40.0%
ACCCTCTCAATCACATTTAC+TGG + chr3_2:49488222-49488241 Msa0409110:intron 40.0%
ATCTTGTTGCAGAGATGGTT+TGG + chr3_2:49488301-49488320 Msa0409110:intron 40.0%
! GATGGTTTGGAACTTTGATC+TGG + chr3_2:49488314-49488333 Msa0409110:intron 40.0%
TCAAATTTGTCGGTCACGAA+AGG - chr3_2:49488409-49488428 None:intergenic 40.0%
AAATGCAAATCAACAGGGCA+GGG - chr3_2:49488977-49488996 None:intergenic 40.0%
AAAATGCAAATCAACAGGGC+AGG - chr3_2:49488978-49488997 None:intergenic 40.0%
TATAGCGGTATCGTGAGAAA+GGG - chr3_2:49489297-49489316 None:intergenic 40.0%
! ACGATACCGCTATAGCATTT+TGG + chr3_2:49489303-49489322 Msa0409110:intron 40.0%
! ATACCGCTATAGCATTTTGG+AGG + chr3_2:49489306-49489325 Msa0409110:intron 40.0%
GGAAGATATAAAGCAGACTG+AGG - chr3_2:49489655-49489674 None:intergenic 40.0%
!! CCTTGCTATTGGAAACTGAA+AGG - chr3_2:49489676-49489695 None:intergenic 40.0%
CCTTTCAGTTTCCAATAGCA+AGG + chr3_2:49489673-49489692 Msa0409110:intron 40.0%
! CAATGGAGAAACCTTGCTAT+TGG - chr3_2:49489687-49489706 None:intergenic 40.0%
GTTACAGGATATACTTTGCG+CGG + chr3_2:49490008-49490027 Msa0409110:intron 40.0%
GGAATAGCATCCTTGTATCA+GGG - chr3_2:49490306-49490325 None:intergenic 40.0%
AGGAATAGCATCCTTGTATC+AGG - chr3_2:49490307-49490326 None:intergenic 40.0%
ACAAGGATGCTATTCCTGAA+TGG + chr3_2:49490310-49490329 Msa0409110:CDS 40.0%
!! TGCTGAAATGCTTTGGGAAA+TGG + chr3_2:49490466-49490485 Msa0409110:intron 40.0%
!! AATGCTTTGGGAAATGGTGT+TGG + chr3_2:49490472-49490491 Msa0409110:intron 40.0%
! CATTGACTGCATATGGATGA+AGG + chr3_2:49490629-49490648 Msa0409110:intron 40.0%
CATATGGATGAAGGATTTGC+TGG + chr3_2:49490638-49490657 Msa0409110:intron 40.0%
!! TATGGATGAAGGATTTGCTG+GGG + chr3_2:49490640-49490659 Msa0409110:intron 40.0%
AAAGTGGAGACTCCTAAGAT+GGG - chr3_2:49490937-49490956 None:intergenic 40.0%
! ACTGCTAAACCAGAAGCTTT+TGG + chr3_2:49491079-49491098 Msa0409110:intron 40.0%
AGGAACGGATACAAATACAG+AGG - chr3_2:49491264-49491283 None:intergenic 40.0%
!! TTGCTTGTTGTGTTCAGGAA+CGG - chr3_2:49491279-49491298 None:intergenic 40.0%
!! TGGATTTGCTTGTTGTGTTC+AGG - chr3_2:49491284-49491303 None:intergenic 40.0%
GTAAGCCTCAAGTACTCAAA+AGG - chr3_2:49491309-49491328 None:intergenic 40.0%
! TACTTGAGGCTTACTAGTCT+TGG + chr3_2:49491315-49491334 Msa0409110:CDS 40.0%
!! CTTACTAGTCTTGGTGTCAT+CGG + chr3_2:49491324-49491343 Msa0409110:CDS 40.0%
ACCCAACATCAGAATGAGTA+AGG - chr3_2:49491372-49491391 None:intergenic 40.0%
TTACTCATTCTGATGTTGGG+TGG + chr3_2:49491371-49491390 Msa0409110:intron 40.0%
GAGATGACCTACATTTCCTA+CGG + chr3_2:49491404-49491423 Msa0409110:intron 40.0%
! GTCTGAATTTTCTGTTCACC+AGG + chr3_2:49491681-49491700 Msa0409110:intron 40.0%
TAACCTCAGTATCATCAACC+TGG - chr3_2:49491702-49491721 None:intergenic 40.0%
GAAAAATGTGGCTAAGGAGA+TGG - chr3_2:49491873-49491892 None:intergenic 40.0%
TGACAGGAAAAATGTGGCTA+AGG - chr3_2:49491879-49491898 None:intergenic 40.0%
AAAACCAAGGTGAAAAGGCA+CGG - chr3_2:49492074-49492093 None:intergenic 40.0%
CATAGCTAAACCCTTGGATT+GGG - chr3_2:49492228-49492247 None:intergenic 40.0%
AAGGGTTTAGCTATGGTCAT+GGG + chr3_2:49492233-49492252 Msa0409110:intron 40.0%
TTAATAGGGAAACCAGACAG+TGG - chr3_2:49492450-49492469 None:intergenic 40.0%
TGAGCATGATAGTCTAACGA+AGG + chr3_2:49492493-49492512 Msa0409110:intron 40.0%
AGAGGCAATTTCAGCAGAAA+GGG - chr3_2:49492772-49492791 None:intergenic 40.0%
AAGAGGCAATTTCAGCAGAA+AGG - chr3_2:49492773-49492792 None:intergenic 40.0%
! CATTTGAAACTTGGCAGGAA+AGG - chr3_2:49492802-49492821 None:intergenic 40.0%
CTGTCTTCCTGACATGTTAA+GGG + chr3_2:49492879-49492898 Msa0409110:intron 40.0%
CACAAGGAATACTTACACGA+AGG - chr3_2:49492924-49492943 None:intergenic 40.0%
ATTGCAGAGAAAAAACCAGG+TGG - chr3_2:49493082-49493101 None:intergenic 40.0%
TCTAGTTACGACCTTTCTCT+TGG - chr3_2:49493349-49493368 None:intergenic 40.0%
! CAACTGATTCACAATGTTGG+AGG + chr3_2:49493522-49493541 Msa0409110:exon 40.0%
TTCACAATGTTGGAGGGAAT+CGG + chr3_2:49493529-49493548 Msa0409110:three_prime_UTR 40.0%
! ATAGAAGAAGACACGGATTG+GGG - chr3_2:49486113-49486132 None:intergenic 40.0%
CATAGAAGAAGACACGGATT+GGG - chr3_2:49486114-49486133 None:intergenic 40.0%
TCATAGAAGAAGACACGGAT+TGG - chr3_2:49486115-49486134 None:intergenic 40.0%
GACACATGAAACTAAGAAGC+TGG + chr3_2:49486430-49486449 Msa0409110:intron 40.0%
ATCTCAACACTTCTGATCGA+AGG - chr3_2:49486537-49486556 None:intergenic 40.0%
! GGAGTGAGAATTGGTTTCAA+TGG + chr3_2:49487038-49487057 Msa0409110:intron 40.0%
! CGTGCGTTACAGATTTTCAA+AGG + chr3_2:49487363-49487382 Msa0409110:intron 40.0%
!! ACAAATGTTTAGCTTGTGCG+TGG + chr3_2:49487436-49487455 Msa0409110:intron 40.0%
!! CAAATGTTTAGCTTGTGCGT+GGG + chr3_2:49487437-49487456 Msa0409110:intron 40.0%
!! AAATGTTTAGCTTGTGCGTG+GGG + chr3_2:49487438-49487457 Msa0409110:intron 40.0%
CGTGATCTGGATTGTCAAAA+TGG + chr3_2:49487548-49487567 Msa0409110:intron 40.0%
GCAAAACTGGTAATTGTGCA+TGG - chr3_2:49487675-49487694 None:intergenic 40.0%
! GTGCATTTTCAATGTCGTCA+GGG - chr3_2:49488048-49488067 None:intergenic 40.0%
! AGTGCATTTTCAATGTCGTC+AGG - chr3_2:49488049-49488068 None:intergenic 40.0%
ACATCTGATGTGTTGAGATG+CGG - chr3_2:49488184-49488203 None:intergenic 40.0%
AGGGTAAGTAAAAGGTTGTG+GGG - chr3_2:49488207-49488226 None:intergenic 40.0%
GAGGGTAAGTAAAAGGTTGT+GGG - chr3_2:49488208-49488227 None:intergenic 40.0%
AGAGGGTAAGTAAAAGGTTG+TGG - chr3_2:49488209-49488228 None:intergenic 40.0%
ACCCTCTCAATCACATTTAC+TGG + chr3_2:49488222-49488241 Msa0409110:intron 40.0%
ATCTTGTTGCAGAGATGGTT+TGG + chr3_2:49488301-49488320 Msa0409110:intron 40.0%
! GATGGTTTGGAACTTTGATC+TGG + chr3_2:49488314-49488333 Msa0409110:intron 40.0%
TCAAATTTGTCGGTCACGAA+AGG - chr3_2:49488409-49488428 None:intergenic 40.0%
AAATGCAAATCAACAGGGCA+GGG - chr3_2:49488977-49488996 None:intergenic 40.0%
AAAATGCAAATCAACAGGGC+AGG - chr3_2:49488978-49488997 None:intergenic 40.0%
TATAGCGGTATCGTGAGAAA+GGG - chr3_2:49489297-49489316 None:intergenic 40.0%
! ACGATACCGCTATAGCATTT+TGG + chr3_2:49489303-49489322 Msa0409110:intron 40.0%
! ATACCGCTATAGCATTTTGG+AGG + chr3_2:49489306-49489325 Msa0409110:intron 40.0%
GGAAGATATAAAGCAGACTG+AGG - chr3_2:49489655-49489674 None:intergenic 40.0%
!! CCTTGCTATTGGAAACTGAA+AGG - chr3_2:49489676-49489695 None:intergenic 40.0%
CCTTTCAGTTTCCAATAGCA+AGG + chr3_2:49489673-49489692 Msa0409110:intron 40.0%
! CAATGGAGAAACCTTGCTAT+TGG - chr3_2:49489687-49489706 None:intergenic 40.0%
GTTACAGGATATACTTTGCG+CGG + chr3_2:49490008-49490027 Msa0409110:intron 40.0%
GGAATAGCATCCTTGTATCA+GGG - chr3_2:49490306-49490325 None:intergenic 40.0%
AGGAATAGCATCCTTGTATC+AGG - chr3_2:49490307-49490326 None:intergenic 40.0%
ACAAGGATGCTATTCCTGAA+TGG + chr3_2:49490310-49490329 Msa0409110:CDS 40.0%
!! TGCTGAAATGCTTTGGGAAA+TGG + chr3_2:49490466-49490485 Msa0409110:intron 40.0%
!! AATGCTTTGGGAAATGGTGT+TGG + chr3_2:49490472-49490491 Msa0409110:intron 40.0%
! CATTGACTGCATATGGATGA+AGG + chr3_2:49490629-49490648 Msa0409110:intron 40.0%
CATATGGATGAAGGATTTGC+TGG + chr3_2:49490638-49490657 Msa0409110:intron 40.0%
!! TATGGATGAAGGATTTGCTG+GGG + chr3_2:49490640-49490659 Msa0409110:intron 40.0%
AAAGTGGAGACTCCTAAGAT+GGG - chr3_2:49490937-49490956 None:intergenic 40.0%
! ACTGCTAAACCAGAAGCTTT+TGG + chr3_2:49491079-49491098 Msa0409110:intron 40.0%
AGGAACGGATACAAATACAG+AGG - chr3_2:49491264-49491283 None:intergenic 40.0%
!! TTGCTTGTTGTGTTCAGGAA+CGG - chr3_2:49491279-49491298 None:intergenic 40.0%
!! TGGATTTGCTTGTTGTGTTC+AGG - chr3_2:49491284-49491303 None:intergenic 40.0%
GTAAGCCTCAAGTACTCAAA+AGG - chr3_2:49491309-49491328 None:intergenic 40.0%
! TACTTGAGGCTTACTAGTCT+TGG + chr3_2:49491315-49491334 Msa0409110:CDS 40.0%
!! CTTACTAGTCTTGGTGTCAT+CGG + chr3_2:49491324-49491343 Msa0409110:CDS 40.0%
ACCCAACATCAGAATGAGTA+AGG - chr3_2:49491372-49491391 None:intergenic 40.0%
TTACTCATTCTGATGTTGGG+TGG + chr3_2:49491371-49491390 Msa0409110:intron 40.0%
GAGATGACCTACATTTCCTA+CGG + chr3_2:49491404-49491423 Msa0409110:intron 40.0%
! GTCTGAATTTTCTGTTCACC+AGG + chr3_2:49491681-49491700 Msa0409110:intron 40.0%
TAACCTCAGTATCATCAACC+TGG - chr3_2:49491702-49491721 None:intergenic 40.0%
GAAAAATGTGGCTAAGGAGA+TGG - chr3_2:49491873-49491892 None:intergenic 40.0%
TGACAGGAAAAATGTGGCTA+AGG - chr3_2:49491879-49491898 None:intergenic 40.0%
AAAACCAAGGTGAAAAGGCA+CGG - chr3_2:49492074-49492093 None:intergenic 40.0%
CATAGCTAAACCCTTGGATT+GGG - chr3_2:49492228-49492247 None:intergenic 40.0%
AAGGGTTTAGCTATGGTCAT+GGG + chr3_2:49492233-49492252 Msa0409110:intron 40.0%
TTAATAGGGAAACCAGACAG+TGG - chr3_2:49492450-49492469 None:intergenic 40.0%
TGAGCATGATAGTCTAACGA+AGG + chr3_2:49492493-49492512 Msa0409110:intron 40.0%
AGAGGCAATTTCAGCAGAAA+GGG - chr3_2:49492772-49492791 None:intergenic 40.0%
AAGAGGCAATTTCAGCAGAA+AGG - chr3_2:49492773-49492792 None:intergenic 40.0%
! CATTTGAAACTTGGCAGGAA+AGG - chr3_2:49492802-49492821 None:intergenic 40.0%
CTGTCTTCCTGACATGTTAA+GGG + chr3_2:49492879-49492898 Msa0409110:intron 40.0%
CACAAGGAATACTTACACGA+AGG - chr3_2:49492924-49492943 None:intergenic 40.0%
ATTGCAGAGAAAAAACCAGG+TGG - chr3_2:49493082-49493101 None:intergenic 40.0%
TCTAGTTACGACCTTTCTCT+TGG - chr3_2:49493349-49493368 None:intergenic 40.0%
! CAACTGATTCACAATGTTGG+AGG + chr3_2:49493522-49493541 Msa0409110:exon 40.0%
TTCACAATGTTGGAGGGAAT+CGG + chr3_2:49493529-49493548 Msa0409110:three_prime_UTR 40.0%
! TTGGGGGCAATTTTCACATG+TGG - chr3_2:49486096-49486115 None:intergenic 45.0%
!! TAGAAGAAGACACGGATTGG+GGG - chr3_2:49486112-49486131 None:intergenic 45.0%
TTCGAGAACGAGTTGTTCAG+AGG - chr3_2:49486198-49486217 None:intergenic 45.0%
!!! GTTCGAGAAGAGCGTTTTCA+CGG - chr3_2:49486238-49486257 None:intergenic 45.0%
TTCTTGTGCTAGGGTTTCTG+TGG + chr3_2:49487216-49487235 Msa0409110:intron 45.0%
!! AATGTTTAGCTTGTGCGTGG+GGG + chr3_2:49487439-49487458 Msa0409110:intron 45.0%
AAAGATGTTCAGCTTGCGTG+TGG + chr3_2:49487624-49487643 Msa0409110:intron 45.0%
AAGATGTTCAGCTTGCGTGT+GGG + chr3_2:49487625-49487644 Msa0409110:intron 45.0%
GGGGTAAAAAACCGCAAAAC+TGG - chr3_2:49487688-49487707 None:intergenic 45.0%
!!! TAGTCGGCATGTCACTTTTG+TGG - chr3_2:49487937-49487956 None:intergenic 45.0%
GAAAACAAAGTGCGGTGAAG+AGG + chr3_2:49488142-49488161 Msa0409110:intron 45.0%
CATCTGATGTGTTGAGATGC+GGG - chr3_2:49488183-49488202 None:intergenic 45.0%
TACTATTGCAGCACTTCTGC+AGG + chr3_2:49488856-49488875 Msa0409110:CDS 45.0%
TTACAGGTGCTTCACTGTAG+AGG - chr3_2:49489024-49489043 None:intergenic 45.0%
! CCGGAGCATCTATAAGTTGA+GGG - chr3_2:49489060-49489079 None:intergenic 45.0%
CCCTCAACTTATAGATGCTC+CGG + chr3_2:49489057-49489076 Msa0409110:intron 45.0%
! ACCGGAGCATCTATAAGTTG+AGG - chr3_2:49489061-49489080 None:intergenic 45.0%
CTATAGCGGTATCGTGAGAA+AGG - chr3_2:49489298-49489317 None:intergenic 45.0%
GGACCTCCAAAATGCTATAG+CGG - chr3_2:49489312-49489331 None:intergenic 45.0%
CAGATAGTAGAGCATAGCAG+TGG - chr3_2:49489333-49489352 None:intergenic 45.0%
!! CTCCCCCTATTTCTTCGTTT+TGG + chr3_2:49489413-49489432 Msa0409110:intron 45.0%
TCCATTGTCCTCCACTAAGT+TGG + chr3_2:49489700-49489719 Msa0409110:intron 45.0%
TCCAACTTAGTGGAGGACAA+TGG - chr3_2:49489704-49489723 None:intergenic 45.0%
GATTTGATTGTGCTGGAGTG+AGG - chr3_2:49489788-49489807 None:intergenic 45.0%
! CACACTCGATTTGATTGTGC+TGG - chr3_2:49489795-49489814 None:intergenic 45.0%
AACTCATCTAACCTGGAGCA+GGG - chr3_2:49489829-49489848 None:intergenic 45.0%
AAACTCATCTAACCTGGAGC+AGG - chr3_2:49489830-49489849 None:intergenic 45.0%
TAGCATCTCACCCTGATACA+AGG + chr3_2:49490293-49490312 Msa0409110:CDS 45.0%
!! GGTGTTGGCTTCTCTAGATT+TGG + chr3_2:49490487-49490506 Msa0409110:intron 45.0%
AGGATTGAGGTAAGCATGGT+AGG + chr3_2:49490567-49490586 Msa0409110:intron 45.0%
AGGTAAGCATGGTAGGTACT+AGG + chr3_2:49490574-49490593 Msa0409110:intron 45.0%
GGTAAGCATGGTAGGTACTA+GGG + chr3_2:49490575-49490594 Msa0409110:intron 45.0%
GATTTCGAATAACCCAGAGC+AGG - chr3_2:49490776-49490795 None:intergenic 45.0%
GATGGGTAAGGTAATCGCAA+GGG - chr3_2:49490920-49490939 None:intergenic 45.0%
AGATGGGTAAGGTAATCGCA+AGG - chr3_2:49490921-49490940 None:intergenic 45.0%
GCGATTACCTTACCCATCTT+AGG + chr3_2:49490922-49490941 Msa0409110:intron 45.0%
CAAAGTGGAGACTCCTAAGA+TGG - chr3_2:49490938-49490957 None:intergenic 45.0%
AGGAGAAAGTTCGAGCAAAG+TGG - chr3_2:49490953-49490972 None:intergenic 45.0%
ACTAAAACGGCGCATCAGAT+GGG - chr3_2:49490992-49491011 None:intergenic 45.0%
TACTAAAACGGCGCATCAGA+TGG - chr3_2:49490993-49491012 None:intergenic 45.0%
!! ATCTGATGCGCCGTTTTAGT+AGG + chr3_2:49490992-49491011 Msa0409110:intron 45.0%
CCTCAAGTACTCAAAAGGTC+TGG - chr3_2:49491304-49491323 None:intergenic 45.0%
!! CCAGACCTTTTGAGTACTTG+AGG + chr3_2:49491301-49491320 Msa0409110:CDS 45.0%
!! TCACCAGGTTGATGATACTG+AGG + chr3_2:49491696-49491715 Msa0409110:intron 45.0%
! CGTGGTATTGAGAAGCTAGT+AGG + chr3_2:49492032-49492051 Msa0409110:intron 45.0%
ATTGGGAGCAGCTATCCAAA+AGG - chr3_2:49492211-49492230 None:intergenic 45.0%
CCATAGCTAAACCCTTGGAT+TGG - chr3_2:49492229-49492248 None:intergenic 45.0%
CCAATCCAAGGGTTTAGCTA+TGG + chr3_2:49492226-49492245 Msa0409110:intron 45.0%
CATGACCATAGCTAAACCCT+TGG - chr3_2:49492234-49492253 None:intergenic 45.0%
CAAGGGTTTAGCTATGGTCA+TGG + chr3_2:49492232-49492251 Msa0409110:intron 45.0%
TGGTCGAGTTCTTGGAAACA+TGG + chr3_2:49492616-49492635 Msa0409110:CDS 45.0%
TCGAGTTCTTGGAAACATGG+TGG + chr3_2:49492619-49492638 Msa0409110:CDS 45.0%
TGCTTCAACAGACGAGATGA+TGG - chr3_2:49492662-49492681 None:intergenic 45.0%
ATTTCAGCAGAAAGGGAGGA+GGG - chr3_2:49492765-49492784 None:intergenic 45.0%
AATTTCAGCAGAAAGGGAGG+AGG - chr3_2:49492766-49492785 None:intergenic 45.0%
! GATGGCATTTGAAACTTGGC+AGG - chr3_2:49492807-49492826 None:intergenic 45.0%
GCTGTCTTCCTGACATGTTA+AGG + chr3_2:49492878-49492897 Msa0409110:intron 45.0%
GTAGCATCCCTTAACATGTC+AGG - chr3_2:49492889-49492908 None:intergenic 45.0%
TGGAGGGAGTAGTAATCACA+AGG - chr3_2:49492940-49492959 None:intergenic 45.0%
TCACAATGTTGGAGGGAATC+GGG + chr3_2:49493530-49493549 Msa0409110:three_prime_UTR 45.0%
! TTGGGGGCAATTTTCACATG+TGG - chr3_2:49486096-49486115 None:intergenic 45.0%
!! TAGAAGAAGACACGGATTGG+GGG - chr3_2:49486112-49486131 None:intergenic 45.0%
TTCGAGAACGAGTTGTTCAG+AGG - chr3_2:49486198-49486217 None:intergenic 45.0%
!!! GTTCGAGAAGAGCGTTTTCA+CGG - chr3_2:49486238-49486257 None:intergenic 45.0%
TTCTTGTGCTAGGGTTTCTG+TGG + chr3_2:49487216-49487235 Msa0409110:intron 45.0%
!! AATGTTTAGCTTGTGCGTGG+GGG + chr3_2:49487439-49487458 Msa0409110:intron 45.0%
AAAGATGTTCAGCTTGCGTG+TGG + chr3_2:49487624-49487643 Msa0409110:intron 45.0%
AAGATGTTCAGCTTGCGTGT+GGG + chr3_2:49487625-49487644 Msa0409110:intron 45.0%
GGGGTAAAAAACCGCAAAAC+TGG - chr3_2:49487688-49487707 None:intergenic 45.0%
!!! TAGTCGGCATGTCACTTTTG+TGG - chr3_2:49487937-49487956 None:intergenic 45.0%
GAAAACAAAGTGCGGTGAAG+AGG + chr3_2:49488142-49488161 Msa0409110:intron 45.0%
CATCTGATGTGTTGAGATGC+GGG - chr3_2:49488183-49488202 None:intergenic 45.0%
TACTATTGCAGCACTTCTGC+AGG + chr3_2:49488856-49488875 Msa0409110:CDS 45.0%
TTACAGGTGCTTCACTGTAG+AGG - chr3_2:49489024-49489043 None:intergenic 45.0%
! CCGGAGCATCTATAAGTTGA+GGG - chr3_2:49489060-49489079 None:intergenic 45.0%
CCCTCAACTTATAGATGCTC+CGG + chr3_2:49489057-49489076 Msa0409110:intron 45.0%
! ACCGGAGCATCTATAAGTTG+AGG - chr3_2:49489061-49489080 None:intergenic 45.0%
CTATAGCGGTATCGTGAGAA+AGG - chr3_2:49489298-49489317 None:intergenic 45.0%
GGACCTCCAAAATGCTATAG+CGG - chr3_2:49489312-49489331 None:intergenic 45.0%
CAGATAGTAGAGCATAGCAG+TGG - chr3_2:49489333-49489352 None:intergenic 45.0%
!! CTCCCCCTATTTCTTCGTTT+TGG + chr3_2:49489413-49489432 Msa0409110:intron 45.0%
TCCATTGTCCTCCACTAAGT+TGG + chr3_2:49489700-49489719 Msa0409110:intron 45.0%
TCCAACTTAGTGGAGGACAA+TGG - chr3_2:49489704-49489723 None:intergenic 45.0%
GATTTGATTGTGCTGGAGTG+AGG - chr3_2:49489788-49489807 None:intergenic 45.0%
! CACACTCGATTTGATTGTGC+TGG - chr3_2:49489795-49489814 None:intergenic 45.0%
AACTCATCTAACCTGGAGCA+GGG - chr3_2:49489829-49489848 None:intergenic 45.0%
AAACTCATCTAACCTGGAGC+AGG - chr3_2:49489830-49489849 None:intergenic 45.0%
TAGCATCTCACCCTGATACA+AGG + chr3_2:49490293-49490312 Msa0409110:CDS 45.0%
!! GGTGTTGGCTTCTCTAGATT+TGG + chr3_2:49490487-49490506 Msa0409110:intron 45.0%
AGGATTGAGGTAAGCATGGT+AGG + chr3_2:49490567-49490586 Msa0409110:intron 45.0%
AGGTAAGCATGGTAGGTACT+AGG + chr3_2:49490574-49490593 Msa0409110:intron 45.0%
GGTAAGCATGGTAGGTACTA+GGG + chr3_2:49490575-49490594 Msa0409110:intron 45.0%
GATTTCGAATAACCCAGAGC+AGG - chr3_2:49490776-49490795 None:intergenic 45.0%
GATGGGTAAGGTAATCGCAA+GGG - chr3_2:49490920-49490939 None:intergenic 45.0%
AGATGGGTAAGGTAATCGCA+AGG - chr3_2:49490921-49490940 None:intergenic 45.0%
GCGATTACCTTACCCATCTT+AGG + chr3_2:49490922-49490941 Msa0409110:intron 45.0%
CAAAGTGGAGACTCCTAAGA+TGG - chr3_2:49490938-49490957 None:intergenic 45.0%
AGGAGAAAGTTCGAGCAAAG+TGG - chr3_2:49490953-49490972 None:intergenic 45.0%
ACTAAAACGGCGCATCAGAT+GGG - chr3_2:49490992-49491011 None:intergenic 45.0%
TACTAAAACGGCGCATCAGA+TGG - chr3_2:49490993-49491012 None:intergenic 45.0%
!! ATCTGATGCGCCGTTTTAGT+AGG + chr3_2:49490992-49491011 Msa0409110:intron 45.0%
CCTCAAGTACTCAAAAGGTC+TGG - chr3_2:49491304-49491323 None:intergenic 45.0%
!! CCAGACCTTTTGAGTACTTG+AGG + chr3_2:49491301-49491320 Msa0409110:CDS 45.0%
!! TCACCAGGTTGATGATACTG+AGG + chr3_2:49491696-49491715 Msa0409110:intron 45.0%
! CGTGGTATTGAGAAGCTAGT+AGG + chr3_2:49492032-49492051 Msa0409110:intron 45.0%
ATTGGGAGCAGCTATCCAAA+AGG - chr3_2:49492211-49492230 None:intergenic 45.0%
CCATAGCTAAACCCTTGGAT+TGG - chr3_2:49492229-49492248 None:intergenic 45.0%
CCAATCCAAGGGTTTAGCTA+TGG + chr3_2:49492226-49492245 Msa0409110:intron 45.0%
CATGACCATAGCTAAACCCT+TGG - chr3_2:49492234-49492253 None:intergenic 45.0%
CAAGGGTTTAGCTATGGTCA+TGG + chr3_2:49492232-49492251 Msa0409110:intron 45.0%
TGGTCGAGTTCTTGGAAACA+TGG + chr3_2:49492616-49492635 Msa0409110:CDS 45.0%
TCGAGTTCTTGGAAACATGG+TGG + chr3_2:49492619-49492638 Msa0409110:CDS 45.0%
TGCTTCAACAGACGAGATGA+TGG - chr3_2:49492662-49492681 None:intergenic 45.0%
ATTTCAGCAGAAAGGGAGGA+GGG - chr3_2:49492765-49492784 None:intergenic 45.0%
AATTTCAGCAGAAAGGGAGG+AGG - chr3_2:49492766-49492785 None:intergenic 45.0%
! GATGGCATTTGAAACTTGGC+AGG - chr3_2:49492807-49492826 None:intergenic 45.0%
GCTGTCTTCCTGACATGTTA+AGG + chr3_2:49492878-49492897 Msa0409110:intron 45.0%
GTAGCATCCCTTAACATGTC+AGG - chr3_2:49492889-49492908 None:intergenic 45.0%
TGGAGGGAGTAGTAATCACA+AGG - chr3_2:49492940-49492959 None:intergenic 45.0%
TCACAATGTTGGAGGGAATC+GGG + chr3_2:49493530-49493549 Msa0409110:three_prime_UTR 45.0%
TTGGAAGAAGCGGGAGAAGA+AGG - chr3_2:49486164-49486183 None:intergenic 50.0%
!! AGCCATCGAGTTGGAAGAAG+CGG - chr3_2:49486174-49486193 None:intergenic 50.0%
TTCAGAGGAAGCCATCGAGT+TGG - chr3_2:49486183-49486202 None:intergenic 50.0%
!! AGAGCGTTTTCACGGAGTTC+AGG - chr3_2:49486230-49486249 None:intergenic 50.0%
! CTTCTGATCGAAGGCGTGTT+TGG - chr3_2:49486528-49486547 None:intergenic 50.0%
!! ATGTTTAGCTTGTGCGTGGG+GGG + chr3_2:49487440-49487459 Msa0409110:intron 50.0%
AGATGTTCAGCTTGCGTGTG+GGG + chr3_2:49487626-49487645 Msa0409110:intron 50.0%
! AAGTGACATGCCGACTACTC+AGG + chr3_2:49487940-49487959 Msa0409110:intron 50.0%
! AGTGACATGCCGACTACTCA+GGG + chr3_2:49487941-49487960 Msa0409110:intron 50.0%
!! AGAAGGCATCGTGCCATCTT+TGG - chr3_2:49487993-49488012 None:intergenic 50.0%
ATGAGTTGTTCCGCAGCAGA+AGG - chr3_2:49488010-49488029 None:intergenic 50.0%
!! AGTGCGGTGAAGAGGTATTG+CGG + chr3_2:49488150-49488169 Msa0409110:intron 50.0%
AAGATCTCGCCCCATTGCTA+TGG + chr3_2:49488822-49488841 Msa0409110:CDS 50.0%
AGGTTGGGAGGAGACAAAAC+AGG - chr3_2:49489768-49489787 None:intergenic 50.0%
GATTGTGCTGGAGTGAGGTT+GGG - chr3_2:49489783-49489802 None:intergenic 50.0%
TGATTGTGCTGGAGTGAGGT+TGG - chr3_2:49489784-49489803 None:intergenic 50.0%
GGATAGTGTGTGTGTGTGTG+TGG + chr3_2:49489982-49490001 Msa0409110:intron 50.0%
! GTGTGTGTGTGGACTGTTAC+AGG + chr3_2:49489993-49490012 Msa0409110:intron 50.0%
CAGGATATACTTTGCGCGGT+AGG + chr3_2:49490012-49490031 Msa0409110:intron 50.0%
TATCATGCGAAGCATGCAGG+TGG - chr3_2:49490057-49490076 None:intergenic 50.0%
ACCTGCATGCTTCGCATGAT+AGG + chr3_2:49490056-49490075 Msa0409110:intron 50.0%
TCCTATCATGCGAAGCATGC+AGG - chr3_2:49490060-49490079 None:intergenic 50.0%
TGACGAATTCTCTCCTGCTC+TGG + chr3_2:49490760-49490779 Msa0409110:intron 50.0%
GACGAATTCTCTCCTGCTCT+GGG + chr3_2:49490761-49490780 Msa0409110:intron 50.0%
GGAGACTCCTAAGATGGGTA+AGG - chr3_2:49490932-49490951 None:intergenic 50.0%
CTAAAACGGCGCATCAGATG+GGG - chr3_2:49490991-49491010 None:intergenic 50.0%
TGTCATCGGTGCACTAGTGA+AGG + chr3_2:49491338-49491357 Msa0409110:CDS 50.0%
! GGGGAGTGAGCTCTCTAAAA+CGG + chr3_2:49491777-49491796 Msa0409110:CDS 50.0%
GATAGCTGCTCCCAATCCAA+GGG + chr3_2:49492215-49492234 Msa0409110:intron 50.0%
TCTGTTAGACGATGTGGGCT+TGG + chr3_2:49492556-49492575 Msa0409110:CDS 50.0%
TTCGCTGTTGGTCGAGTTCT+TGG + chr3_2:49492608-49492627 Msa0409110:CDS 50.0%
TTCGTCTGTCAGATAACCCG+AGG + chr3_2:49492699-49492718 Msa0409110:CDS 50.0%
TTTCAGCAGAAAGGGAGGAG+GGG - chr3_2:49492764-49492783 None:intergenic 50.0%
GGCAATTTCAGCAGAAAGGG+AGG - chr3_2:49492769-49492788 None:intergenic 50.0%
TTCAGGAGGACCCAACAACT+AGG + chr3_2:49493487-49493506 Msa0409110:intron 50.0%
AGGACCCAACAACTAGGAAG+TGG + chr3_2:49493493-49493512 Msa0409110:CDS 50.0%
GCAGCCACTTCCTAGTTGTT+GGG - chr3_2:49493500-49493519 None:intergenic 50.0%
TGCAGCCACTTCCTAGTTGT+TGG - chr3_2:49493501-49493520 None:intergenic 50.0%
TTGGAAGAAGCGGGAGAAGA+AGG - chr3_2:49486164-49486183 None:intergenic 50.0%
!! AGCCATCGAGTTGGAAGAAG+CGG - chr3_2:49486174-49486193 None:intergenic 50.0%
TTCAGAGGAAGCCATCGAGT+TGG - chr3_2:49486183-49486202 None:intergenic 50.0%
!! AGAGCGTTTTCACGGAGTTC+AGG - chr3_2:49486230-49486249 None:intergenic 50.0%
! CTTCTGATCGAAGGCGTGTT+TGG - chr3_2:49486528-49486547 None:intergenic 50.0%
!! ATGTTTAGCTTGTGCGTGGG+GGG + chr3_2:49487440-49487459 Msa0409110:intron 50.0%
AGATGTTCAGCTTGCGTGTG+GGG + chr3_2:49487626-49487645 Msa0409110:intron 50.0%
! AAGTGACATGCCGACTACTC+AGG + chr3_2:49487940-49487959 Msa0409110:intron 50.0%
! AGTGACATGCCGACTACTCA+GGG + chr3_2:49487941-49487960 Msa0409110:intron 50.0%
!! AGAAGGCATCGTGCCATCTT+TGG - chr3_2:49487993-49488012 None:intergenic 50.0%
ATGAGTTGTTCCGCAGCAGA+AGG - chr3_2:49488010-49488029 None:intergenic 50.0%
!! AGTGCGGTGAAGAGGTATTG+CGG + chr3_2:49488150-49488169 Msa0409110:intron 50.0%
AAGATCTCGCCCCATTGCTA+TGG + chr3_2:49488822-49488841 Msa0409110:CDS 50.0%
AGGTTGGGAGGAGACAAAAC+AGG - chr3_2:49489768-49489787 None:intergenic 50.0%
GATTGTGCTGGAGTGAGGTT+GGG - chr3_2:49489783-49489802 None:intergenic 50.0%
TGATTGTGCTGGAGTGAGGT+TGG - chr3_2:49489784-49489803 None:intergenic 50.0%
GGATAGTGTGTGTGTGTGTG+TGG + chr3_2:49489982-49490001 Msa0409110:intron 50.0%
! GTGTGTGTGTGGACTGTTAC+AGG + chr3_2:49489993-49490012 Msa0409110:intron 50.0%
CAGGATATACTTTGCGCGGT+AGG + chr3_2:49490012-49490031 Msa0409110:intron 50.0%
TATCATGCGAAGCATGCAGG+TGG - chr3_2:49490057-49490076 None:intergenic 50.0%
ACCTGCATGCTTCGCATGAT+AGG + chr3_2:49490056-49490075 Msa0409110:intron 50.0%
TCCTATCATGCGAAGCATGC+AGG - chr3_2:49490060-49490079 None:intergenic 50.0%
TGACGAATTCTCTCCTGCTC+TGG + chr3_2:49490760-49490779 Msa0409110:intron 50.0%
GACGAATTCTCTCCTGCTCT+GGG + chr3_2:49490761-49490780 Msa0409110:intron 50.0%
GGAGACTCCTAAGATGGGTA+AGG - chr3_2:49490932-49490951 None:intergenic 50.0%
CTAAAACGGCGCATCAGATG+GGG - chr3_2:49490991-49491010 None:intergenic 50.0%
TGTCATCGGTGCACTAGTGA+AGG + chr3_2:49491338-49491357 Msa0409110:CDS 50.0%
! GGGGAGTGAGCTCTCTAAAA+CGG + chr3_2:49491777-49491796 Msa0409110:CDS 50.0%
GATAGCTGCTCCCAATCCAA+GGG + chr3_2:49492215-49492234 Msa0409110:intron 50.0%
TCTGTTAGACGATGTGGGCT+TGG + chr3_2:49492556-49492575 Msa0409110:CDS 50.0%
TTCGCTGTTGGTCGAGTTCT+TGG + chr3_2:49492608-49492627 Msa0409110:CDS 50.0%
TTCGTCTGTCAGATAACCCG+AGG + chr3_2:49492699-49492718 Msa0409110:CDS 50.0%
TTTCAGCAGAAAGGGAGGAG+GGG - chr3_2:49492764-49492783 None:intergenic 50.0%
GGCAATTTCAGCAGAAAGGG+AGG - chr3_2:49492769-49492788 None:intergenic 50.0%
TTCAGGAGGACCCAACAACT+AGG + chr3_2:49493487-49493506 Msa0409110:intron 50.0%
AGGACCCAACAACTAGGAAG+TGG + chr3_2:49493493-49493512 Msa0409110:CDS 50.0%
GCAGCCACTTCCTAGTTGTT+GGG - chr3_2:49493500-49493519 None:intergenic 50.0%
TGCAGCCACTTCCTAGTTGT+TGG - chr3_2:49493501-49493520 None:intergenic 50.0%
TCCCGCTTCTTCCAACTCGA+TGG + chr3_2:49486169-49486188 Msa0409110:CDS 55.0%
!! GCCATCGAGTTGGAAGAAGC+GGG - chr3_2:49486173-49486192 None:intergenic 55.0%
CGCTCTTCTCGAACTCTCCA+AGG + chr3_2:49486244-49486263 Msa0409110:CDS 55.0%
GATGTTCAGCTTGCGTGTGG+GGG + chr3_2:49487627-49487646 Msa0409110:intron 55.0%
ATGTTCAGCTTGCGTGTGGG+GGG + chr3_2:49487628-49487647 Msa0409110:intron 55.0%
! AGGCATCGTGCCATCTTTGG+CGG - chr3_2:49487990-49488009 None:intergenic 55.0%
TGCACTTCGTGAGCTCTGCA+AGG + chr3_2:49488063-49488082 Msa0409110:intron 55.0%
!! GTGCGGTGAAGAGGTATTGC+GGG + chr3_2:49488151-49488170 Msa0409110:intron 55.0%
ACAGGGCAGGGTTTCGCATA+GGG - chr3_2:49488965-49488984 None:intergenic 55.0%
AACAGGGCAGGGTTTCGCAT+AGG - chr3_2:49488966-49488985 None:intergenic 55.0%
!! GGATGAAGGATTTGCTGGGG+TGG + chr3_2:49490643-49490662 Msa0409110:intron 55.0%
TGCCTGCGCACTATGGAGAT+GGG + chr3_2:49491757-49491776 Msa0409110:CDS 55.0%
! CCAAGGTGAAAAGGCACGGT+TGG - chr3_2:49492070-49492089 None:intergenic 55.0%
! CCAACCGTGCCTTTTCACCT+TGG + chr3_2:49492067-49492086 Msa0409110:intron 55.0%
GGATAGCTGCTCCCAATCCA+AGG + chr3_2:49492214-49492233 Msa0409110:intron 55.0%
AACGAAGGCTCTGCTGCAAC+AGG + chr3_2:49492508-49492527 Msa0409110:intron 55.0%
!!! GCTGAGCGCTTTTTCGCTGT+TGG + chr3_2:49492596-49492615 Msa0409110:CDS 55.0%
! GGCAGGAAAGGGCATGAAAG+AGG - chr3_2:49492790-49492809 None:intergenic 55.0%
AATCGGGTTCCTGCACTGCA+AGG + chr3_2:49493546-49493565 Msa0409110:three_prime_UTR 55.0%
TCCCGCTTCTTCCAACTCGA+TGG + chr3_2:49486169-49486188 Msa0409110:CDS 55.0%
!! GCCATCGAGTTGGAAGAAGC+GGG - chr3_2:49486173-49486192 None:intergenic 55.0%
CGCTCTTCTCGAACTCTCCA+AGG + chr3_2:49486244-49486263 Msa0409110:CDS 55.0%
GATGTTCAGCTTGCGTGTGG+GGG + chr3_2:49487627-49487646 Msa0409110:intron 55.0%
ATGTTCAGCTTGCGTGTGGG+GGG + chr3_2:49487628-49487647 Msa0409110:intron 55.0%
! AGGCATCGTGCCATCTTTGG+CGG - chr3_2:49487990-49488009 None:intergenic 55.0%
TGCACTTCGTGAGCTCTGCA+AGG + chr3_2:49488063-49488082 Msa0409110:intron 55.0%
!! GTGCGGTGAAGAGGTATTGC+GGG + chr3_2:49488151-49488170 Msa0409110:intron 55.0%
ACAGGGCAGGGTTTCGCATA+GGG - chr3_2:49488965-49488984 None:intergenic 55.0%
AACAGGGCAGGGTTTCGCAT+AGG - chr3_2:49488966-49488985 None:intergenic 55.0%
!! GGATGAAGGATTTGCTGGGG+TGG + chr3_2:49490643-49490662 Msa0409110:intron 55.0%
TGCCTGCGCACTATGGAGAT+GGG + chr3_2:49491757-49491776 Msa0409110:CDS 55.0%
! CCAAGGTGAAAAGGCACGGT+TGG - chr3_2:49492070-49492089 None:intergenic 55.0%
! CCAACCGTGCCTTTTCACCT+TGG + chr3_2:49492067-49492086 Msa0409110:intron 55.0%
GGATAGCTGCTCCCAATCCA+AGG + chr3_2:49492214-49492233 Msa0409110:intron 55.0%
AACGAAGGCTCTGCTGCAAC+AGG + chr3_2:49492508-49492527 Msa0409110:intron 55.0%
!!! GCTGAGCGCTTTTTCGCTGT+TGG + chr3_2:49492596-49492615 Msa0409110:CDS 55.0%
! GGCAGGAAAGGGCATGAAAG+AGG - chr3_2:49492790-49492809 None:intergenic 55.0%
AATCGGGTTCCTGCACTGCA+AGG + chr3_2:49493546-49493565 Msa0409110:three_prime_UTR 55.0%
CACGCTCTCACACTCGAGAC+TGG - chr3_2:49487347-49487366 None:intergenic 60.0%
! GGGGGGCGCGTTAAAATGTG+TGG + chr3_2:49487457-49487476 Msa0409110:intron 60.0%
GCAGTGGCACCCTGAGTAGT+CGG - chr3_2:49487953-49487972 None:intergenic 60.0%
TTTGGCGGCAGCTGAACCCT+GGG - chr3_2:49487975-49487994 None:intergenic 60.0%
GGTTCAGCTGCCGCCAAAGA+TGG + chr3_2:49487977-49487996 Msa0409110:intron 60.0%
TGGCACGATGCCTTCTGCTG+CGG + chr3_2:49487997-49488016 Msa0409110:intron 60.0%
CAGGGCAGGGTTTCGCATAG+GGG - chr3_2:49488964-49488983 None:intergenic 60.0%
TGTGCTGGAGTGAGGTTGGG+AGG - chr3_2:49489780-49489799 None:intergenic 60.0%
CAATGCTCTTGCCCTGCTCC+AGG + chr3_2:49489815-49489834 Msa0409110:CDS 60.0%
TCCATAGTGCGCAGGCACAG+GGG - chr3_2:49491754-49491773 None:intergenic 60.0%
CTCCATAGTGCGCAGGCACA+GGG - chr3_2:49491755-49491774 None:intergenic 60.0%
TCTCCATAGTGCGCAGGCAC+AGG - chr3_2:49491756-49491775 None:intergenic 60.0%
GTGCCTGCGCACTATGGAGA+TGG + chr3_2:49491756-49491775 Msa0409110:CDS 60.0%
GCCTGCGCACTATGGAGATG+GGG + chr3_2:49491758-49491777 Msa0409110:CDS 60.0%
TCCCCATCTCCATAGTGCGC+AGG - chr3_2:49491762-49491781 None:intergenic 60.0%
AGAAAGGGAGGAGGGGAAGG+AGG - chr3_2:49492757-49492776 None:intergenic 60.0%
AGCAGAAAGGGAGGAGGGGA+AGG - chr3_2:49492760-49492779 None:intergenic 60.0%
GTTCCTGCACTGCAAGGTGG+AGG + chr3_2:49493552-49493571 Msa0409110:three_prime_UTR 60.0%
CACGCTCTCACACTCGAGAC+TGG - chr3_2:49487347-49487366 None:intergenic 60.0%
! GGGGGGCGCGTTAAAATGTG+TGG + chr3_2:49487457-49487476 Msa0409110:intron 60.0%
GCAGTGGCACCCTGAGTAGT+CGG - chr3_2:49487953-49487972 None:intergenic 60.0%
TTTGGCGGCAGCTGAACCCT+GGG - chr3_2:49487975-49487994 None:intergenic 60.0%
GGTTCAGCTGCCGCCAAAGA+TGG + chr3_2:49487977-49487996 Msa0409110:intron 60.0%
TGGCACGATGCCTTCTGCTG+CGG + chr3_2:49487997-49488016 Msa0409110:intron 60.0%
CAGGGCAGGGTTTCGCATAG+GGG - chr3_2:49488964-49488983 None:intergenic 60.0%
TGTGCTGGAGTGAGGTTGGG+AGG - chr3_2:49489780-49489799 None:intergenic 60.0%
CAATGCTCTTGCCCTGCTCC+AGG + chr3_2:49489815-49489834 Msa0409110:CDS 60.0%
TCCATAGTGCGCAGGCACAG+GGG - chr3_2:49491754-49491773 None:intergenic 60.0%
CTCCATAGTGCGCAGGCACA+GGG - chr3_2:49491755-49491774 None:intergenic 60.0%
TCTCCATAGTGCGCAGGCAC+AGG - chr3_2:49491756-49491775 None:intergenic 60.0%
GTGCCTGCGCACTATGGAGA+TGG + chr3_2:49491756-49491775 Msa0409110:CDS 60.0%
GCCTGCGCACTATGGAGATG+GGG + chr3_2:49491758-49491777 Msa0409110:CDS 60.0%
TCCCCATCTCCATAGTGCGC+AGG - chr3_2:49491762-49491781 None:intergenic 60.0%
AGAAAGGGAGGAGGGGAAGG+AGG - chr3_2:49492757-49492776 None:intergenic 60.0%
AGCAGAAAGGGAGGAGGGGA+AGG - chr3_2:49492760-49492779 None:intergenic 60.0%
GTTCCTGCACTGCAAGGTGG+AGG + chr3_2:49493552-49493571 Msa0409110:three_prime_UTR 60.0%
!! TACTCAGGGTGCCACTGCCC+AGG + chr3_2:49487955-49487974 Msa0409110:intron 65.0%
!! ACTCAGGGTGCCACTGCCCA+GGG + chr3_2:49487956-49487975 Msa0409110:intron 65.0%
CTTTGGCGGCAGCTGAACCC+TGG - chr3_2:49487976-49487995 None:intergenic 65.0%
TCCCCTGTGCCTGCGCACTA+TGG + chr3_2:49491750-49491769 Msa0409110:CDS 65.0%
CGGGTTCCTGCACTGCAAGG+TGG + chr3_2:49493549-49493568 Msa0409110:three_prime_UTR 65.0%
CCTCCTCCACCTTGCAGTGC+AGG - chr3_2:49493558-49493577 None:intergenic 65.0%
CCTGCACTGCAAGGTGGAGG+AGG + chr3_2:49493555-49493574 Msa0409110:three_prime_UTR 65.0%
!! TACTCAGGGTGCCACTGCCC+AGG + chr3_2:49487955-49487974 Msa0409110:intron 65.0%
!! ACTCAGGGTGCCACTGCCCA+GGG + chr3_2:49487956-49487975 Msa0409110:intron 65.0%
CTTTGGCGGCAGCTGAACCC+TGG - chr3_2:49487976-49487995 None:intergenic 65.0%
TCCCCTGTGCCTGCGCACTA+TGG + chr3_2:49491750-49491769 Msa0409110:CDS 65.0%
CGGGTTCCTGCACTGCAAGG+TGG + chr3_2:49493549-49493568 Msa0409110:three_prime_UTR 65.0%
CCTCCTCCACCTTGCAGTGC+AGG - chr3_2:49493558-49493577 None:intergenic 65.0%
CCTGCACTGCAAGGTGGAGG+AGG + chr3_2:49493555-49493574 Msa0409110:three_prime_UTR 65.0%
GGCAGCTGAACCCTGGGCAG+TGG - chr3_2:49487969-49487988 None:intergenic 70.0%
GGCAGCTGAACCCTGGGCAG+TGG - chr3_2:49487969-49487988 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 49486077 49493746 49486077 ID=Msa0409110;Name=Msa0409110
chr3_2 mRNA 49486077 49493746 49486077 ID=Msa0409110-mRNA-1;Parent=Msa0409110;Name=Msa0409110-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.85|0.87|1|0.85|1|8|218|274
chr3_2 exon 49486077 49486265 49486077 ID=Msa0409110-mRNA-1:exon:9707;Parent=Msa0409110-mRNA-1
chr3_2 exon 49488806 49488877 49488806 ID=Msa0409110-mRNA-1:exon:9708;Parent=Msa0409110-mRNA-1
chr3_2 exon 49489747 49489836 49489747 ID=Msa0409110-mRNA-1:exon:9709;Parent=Msa0409110-mRNA-1
chr3_2 exon 49490289 49490331 49490289 ID=Msa0409110-mRNA-1:exon:9710;Parent=Msa0409110-mRNA-1
chr3_2 exon 49491253 49491359 49491253 ID=Msa0409110-mRNA-1:exon:9711;Parent=Msa0409110-mRNA-1
chr3_2 exon 49491703 49491798 49491703 ID=Msa0409110-mRNA-1:exon:9712;Parent=Msa0409110-mRNA-1
chr3_2 exon 49492530 49492720 49492530 ID=Msa0409110-mRNA-1:exon:9713;Parent=Msa0409110-mRNA-1
chr3_2 exon 49493492 49493746 49493492 ID=Msa0409110-mRNA-1:exon:9714;Parent=Msa0409110-mRNA-1
chr3_2 CDS 49486077 49486265 49486077 ID=Msa0409110-mRNA-1:cds;Parent=Msa0409110-mRNA-1
chr3_2 CDS 49488806 49488877 49488806 ID=Msa0409110-mRNA-1:cds;Parent=Msa0409110-mRNA-1
chr3_2 CDS 49489747 49489836 49489747 ID=Msa0409110-mRNA-1:cds;Parent=Msa0409110-mRNA-1
chr3_2 CDS 49490289 49490331 49490289 ID=Msa0409110-mRNA-1:cds;Parent=Msa0409110-mRNA-1
chr3_2 CDS 49491253 49491359 49491253 ID=Msa0409110-mRNA-1:cds;Parent=Msa0409110-mRNA-1
chr3_2 CDS 49491703 49491798 49491703 ID=Msa0409110-mRNA-1:cds;Parent=Msa0409110-mRNA-1
chr3_2 CDS 49492530 49492720 49492530 ID=Msa0409110-mRNA-1:cds;Parent=Msa0409110-mRNA-1
chr3_2 CDS 49493492 49493528 49493492 ID=Msa0409110-mRNA-1:cds;Parent=Msa0409110-mRNA-1
chr3_2 three_prime_UTR 49493529 49493746 49493529 ID=Msa0409110-mRNA-1:three_prime_utr;Parent=Msa0409110-mRNA-1
Gene Sequence

>Msa0409110

ATGTCTACATCACTAGCCACATGTGAAAATTGCCCCCAATCCGTGTCTTCTTCTATGAACAACTCTTCTTCATTCGGTTCTATTCCTTCTTCTCCCGCTTCTTCCAACTCGATGGCTTCCTCTGAACAACTCGTTCTCGAACTCAGCAATCCTGAACTCCGTGAAAACGCTCTTCTCGAACTCTCCAAGAAGAGGGAGCAATTTCAAGATCTCGCCCCATTGCTATGGAATTCATTTGGTACTATTGCAGCACTTCTGCAGGAAATTGTTTCAATATATCCTGTTTTGTCTCCTCCCAACCTCACTCCAGCACAATCAAATCGAGTGTGCAATGCTCTTGCCCTGCTCCAGTGTGTAGCATCTCACCCTGATACAAGGATGCTATTCCTGAATGCGCACATTCCTCTGTATTTGTATCCGTTCCTGAACACAACAAGCAAATCCAGACCTTTTGAGTACTTGAGGCTTACTAGTCTTGGTGTCATCGGTGCACTAGTGAAGGTTGATGATACTGAGGTTATTAGTTTTCTGCTTTCGACTGAAATAATTCCCCTGTGCCTGCGCACTATGGAGATGGGGAGTGAGCTCTCTAAAACGGTTGCAACATTTATTGTTCAAAAGATTCTGTTAGACGATGTGGGCTTGGACTATATTTGTACTACAGCTGAGCGCTTTTTCGCTGTTGGTCGAGTTCTTGGAAACATGGTGGCAGCTCTTGCTGAGCAACCATCATCTCGTCTGTTGAAGCATATCATTCGATGCTATCTTCGTCTGTCAGATAACCCGAGGAGGACCCAACAACTAGGAAGTGGCTGCAACAACTGA
Protein sequence

>Msa0409110

MSTSLATCENCPQSVSSSMNNSSSFGSIPSSPASSNSMASSEQLVLELSNPELRENALLELSKKREQFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRRTQQLGSGCNN*