Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416720 | XP_003600904.1 | 96.975 | 595 | 16 | 1 | 1 | 595 | 1 | 593 | 0.0 | 1199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416720 | sp|Q39033|PLCD2_ARATH | 70.339 | 590 | 163 | 6 | 7 | 595 | 3 | 581 | 0.0 | 861 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416720 | Q93YX8 | 96.975 | 595 | 16 | 1 | 1 | 595 | 1 | 593 | 0.0 | 1199 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0416720 | Msa1420270 | 0.810030 | 1.411599e-50 | -8.615850e-47 |
| Msa0416720 | Msa1444260 | 0.824657 | 7.167421e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416720 | MtrunA17_Chr3g0113531 | 96.975 | 595 | 16 | 1 | 1 | 595 | 1 | 593 | 0.0 | 1199 |
| Msa0416720 | MtrunA17_Chr3g0112551 | 91.261 | 595 | 29 | 2 | 1 | 595 | 1 | 572 | 0.0 | 1017 |
| Msa0416720 | MtrunA17_Chr5g0437081 | 76.311 | 591 | 132 | 5 | 7 | 594 | 3 | 588 | 0.0 | 934 |
| Msa0416720 | MtrunA17_Chr5g0430181 | 63.149 | 597 | 205 | 7 | 9 | 595 | 3 | 594 | 0.0 | 771 |
| Msa0416720 | MtrunA17_Chr5g0437061 | 63.817 | 503 | 149 | 6 | 113 | 594 | 1 | 491 | 0.0 | 640 |
| Msa0416720 | MtrunA17_Chr5g0430191 | 53.109 | 595 | 241 | 9 | 3 | 594 | 13 | 572 | 0.0 | 602 |
| Msa0416720 | MtrunA17_Chr5g0437041 | 51.500 | 600 | 256 | 8 | 18 | 594 | 19 | 606 | 0.0 | 602 |
| Msa0416720 | MtrunA17_Chr3g0113521 | 50.339 | 590 | 273 | 9 | 12 | 594 | 10 | 586 | 0.0 | 576 |
| Msa0416720 | MtrunA17_Chr3g0113471 | 51.525 | 590 | 268 | 9 | 12 | 594 | 9 | 587 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416720 | AT3G08510.2 | 70.339 | 590 | 163 | 6 | 7 | 595 | 3 | 581 | 0.0 | 861 |
| Msa0416720 | AT3G08510.1 | 70.339 | 590 | 163 | 6 | 7 | 595 | 3 | 581 | 0.0 | 861 |
| Msa0416720 | AT3G55940.1 | 67.061 | 592 | 182 | 7 | 7 | 595 | 3 | 584 | 0.0 | 805 |
| Msa0416720 | AT3G08510.4 | 66.271 | 590 | 158 | 7 | 7 | 595 | 3 | 552 | 0.0 | 787 |
| Msa0416720 | AT3G08510.3 | 66.271 | 590 | 158 | 7 | 7 | 595 | 3 | 552 | 0.0 | 787 |
| Msa0416720 | AT2G40116.1 | 61.141 | 561 | 191 | 8 | 44 | 594 | 69 | 612 | 0.0 | 687 |
| Msa0416720 | AT5G58700.3 | 56.291 | 604 | 248 | 8 | 1 | 595 | 1 | 597 | 0.0 | 678 |
| Msa0416720 | AT5G58700.1 | 56.291 | 604 | 248 | 8 | 1 | 595 | 1 | 597 | 0.0 | 678 |
| Msa0416720 | AT5G58700.2 | 63.136 | 491 | 172 | 5 | 109 | 595 | 4 | 489 | 0.0 | 635 |
| Msa0416720 | AT5G58690.3 | 52.000 | 600 | 247 | 6 | 9 | 595 | 7 | 578 | 0.0 | 629 |
| Msa0416720 | AT5G58690.1 | 52.000 | 600 | 247 | 6 | 9 | 595 | 7 | 578 | 0.0 | 629 |
| Msa0416720 | AT5G58690.2 | 53.345 | 583 | 230 | 7 | 27 | 595 | 5 | 559 | 0.0 | 621 |
| Msa0416720 | AT5G58670.1 | 52.462 | 589 | 243 | 4 | 7 | 592 | 2 | 556 | 0.0 | 612 |
| Msa0416720 | AT4G38530.1 | 49.915 | 587 | 258 | 8 | 8 | 592 | 3 | 555 | 0.0 | 578 |
| Msa0416720 | AT3G47290.1 | 39.961 | 513 | 245 | 11 | 84 | 594 | 79 | 530 | 6.81e-119 | 363 |
| Msa0416720 | AT3G47290.2 | 40.161 | 498 | 235 | 11 | 84 | 579 | 79 | 515 | 8.71e-115 | 354 |
| Msa0416720 | AT3G47220.1 | 36.851 | 578 | 289 | 13 | 27 | 594 | 19 | 530 | 8.48e-112 | 345 |
Find 169 sgRNAs with CRISPR-Local
Find 459 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTATAATCCATTAAT+TGG | 0.072901 | 3_2:+63620843 | Msa0416720:CDS |
| CACGAACACCACGCGCTTAT+TGG | 0.162665 | 3_2:+63617895 | Msa0416720:five_prime_UTR |
| CAAATGTTTGACGTCTATTA+AGG | 0.230837 | 3_2:+63619599 | Msa0416720:CDS |
| CCATGCATCCACCCAATTAA+TGG | 0.240859 | 3_2:-63620855 | None:intergenic |
| AGGATCGAAAACCTCATTAA+AGG | 0.241458 | 3_2:-63621296 | None:intergenic |
| AGGATAGTTGGTTGCCTTCT+TGG | 0.250112 | 3_2:+63622056 | Msa0416720:CDS |
| TGGTTCTTTGGCAGGGTTAT+GGG | 0.259926 | 3_2:+63621185 | Msa0416720:intron |
| CGAATTCCCGCTTTCAGTTC+CGG | 0.259987 | 3_2:+63622090 | Msa0416720:CDS |
| TAATCAGGTGACTGTATATA+TGG | 0.261260 | 3_2:+63621470 | Msa0416720:intron |
| GTGGTTCTTTGGCAGGGTTA+TGG | 0.264327 | 3_2:+63621184 | Msa0416720:intron |
| CTTAGACGTCTCACTTTATC+AGG | 0.266369 | 3_2:-63620314 | None:intergenic |
| ATAAAGAAGCTGGTGGGTTT+TGG | 0.295750 | 3_2:-63624133 | None:intergenic |
| AGGGTTATGGGAGATCTCTT+TGG | 0.311117 | 3_2:+63621197 | Msa0416720:intron |
| CTTATGCAGGTTGGAATTGC+TGG | 0.313742 | 3_2:+63621992 | Msa0416720:intron |
| TTCGATGGCAAATGAGCTTT+AGG | 0.326162 | 3_2:-63621316 | None:intergenic |
| CCCACACAGGTAAGCATGTT+TGG | 0.326311 | 3_2:-63622177 | None:intergenic |
| CCTCAATCAGAAAGCTTCTA+AGG | 0.327850 | 3_2:-63618162 | None:intergenic |
| TAAACGGGACATTGTTTGTT+TGG | 0.328652 | 3_2:-63624156 | None:intergenic |
| GGGTGATTGAATTGGATATA+TGG | 0.356065 | 3_2:+63619416 | Msa0416720:CDS |
| GTTGTATTTATCTCCTTTGC+GGG | 0.362756 | 3_2:-63622236 | None:intergenic |
| GGATCGAAAACCTCATTAAA+GGG | 0.364977 | 3_2:-63621295 | None:intergenic |
| CCACCTTACTCCTGATCTTC+AGG | 0.370917 | 3_2:+63619671 | Msa0416720:CDS |
| CCTCCTCTCTTACCTTCCAC+TGG | 0.371999 | 3_2:+63618316 | Msa0416720:CDS |
| GGTCATAATTCATATCTAAC+TGG | 0.373291 | 3_2:+63619331 | Msa0416720:CDS |
| TAGATGGTTACTCAAACATT+TGG | 0.373406 | 3_2:+63619817 | Msa0416720:intron |
| CATTCCACTATTCCGCCTTT+AGG | 0.376060 | 3_2:-63620278 | None:intergenic |
| CTTCGTTGCGTCAGAATATC+CGG | 0.378354 | 3_2:+63619629 | Msa0416720:CDS |
| TCACAGAAGGGAAAGCCTTT+AGG | 0.380419 | 3_2:+63619976 | Msa0416720:CDS |
| TATGTTTCTGCTGCCGGCGC+GGG | 0.383483 | 3_2:+63618050 | Msa0416720:CDS |
| AGGTGTTAGGGTGATTGAAT+TGG | 0.383680 | 3_2:+63619408 | Msa0416720:CDS |
| AAGCACTTCAGAGAGGTGTT+AGG | 0.389332 | 3_2:+63619395 | Msa0416720:CDS |
| GCCACTTTGGCCTGAAGATC+AGG | 0.391390 | 3_2:-63619681 | None:intergenic |
| CCTTAGAAGCTTTCTGATTG+AGG | 0.391432 | 3_2:+63618162 | Msa0416720:CDS |
| CGCTTAATTGCTATTCATGC+TGG | 0.391854 | 3_2:+63620251 | Msa0416720:CDS |
| AGGAGTAAGGTGGTCTTCTA+AGG | 0.392968 | 3_2:-63619661 | None:intergenic |
| GGAGGCACCGCCGGAGATAA+AGG | 0.396433 | 3_2:+63618090 | Msa0416720:CDS |
| CCCGCTTTCAGTTCCGGAGC+TGG | 0.397820 | 3_2:+63622096 | Msa0416720:CDS |
| GCCATCGAAAACTACTTTGA+AGG | 0.398900 | 3_2:+63621330 | Msa0416720:CDS |
| GTGTTCGTGTGATCGTGTTT+TGG | 0.402329 | 3_2:-63617881 | None:intergenic |
| ATGTTTAATACGGCTTTGTT+TGG | 0.403850 | 3_2:-63624095 | None:intergenic |
| TTTAGGTGATGAAGAAGCTT+GGG | 0.407451 | 3_2:+63619993 | Msa0416720:CDS |
| GAAACACAAGCAATCATTGA+TGG | 0.412944 | 3_2:+63618214 | Msa0416720:CDS |
| GATGATGTTGAAGTCCTTCA+TGG | 0.428848 | 3_2:+63619454 | Msa0416720:CDS |
| TCCTACCTCAGAAACCTTGA+AGG | 0.435352 | 3_2:+63619855 | Msa0416720:CDS |
| CAAAGTCAATAGAGGATAGT+TGG | 0.441950 | 3_2:+63622044 | Msa0416720:CDS |
| TGTTGTATTTATCTCCTTTG+CGG | 0.442914 | 3_2:-63622237 | None:intergenic |
| TCTCCTTTGCGGGAATGTAA+TGG | 0.444112 | 3_2:-63622226 | None:intergenic |
| AGTTTCTTCAAGTTTCTCTT+CGG | 0.446429 | 3_2:+63618283 | Msa0416720:CDS |
| ATACGGCTTTGTTTGGCAAA+TGG | 0.447340 | 3_2:-63624088 | None:intergenic |
| CATACCCTTGCATAGAAGTC+TGG | 0.448430 | 3_2:-63621546 | None:intergenic |
| CTCTGAAGTGCTTTGATGAT+GGG | 0.452451 | 3_2:-63619385 | None:intergenic |
| TCTTCTAAGGTTATTACAAC+CGG | 0.454332 | 3_2:-63619648 | None:intergenic |
| CAAATTATAATCCATTAATT+GGG | 0.455647 | 3_2:+63620844 | Msa0416720:CDS |
| CATATGGAAAAGAAATTGTC+AGG | 0.456553 | 3_2:+63620372 | Msa0416720:CDS |
| CGGGTTTAAACTCGGCGTAT+TGG | 0.456988 | 3_2:+63618069 | Msa0416720:CDS |
| CTCCTCTCTTACCTTCCACT+GGG | 0.458800 | 3_2:+63618317 | Msa0416720:CDS |
| AAGGTACTCCTTAGGCGGCT+TGG | 0.465613 | 3_2:-63619923 | None:intergenic |
| GAAAAGGCTGCTGAAACATA+TGG | 0.467059 | 3_2:+63620356 | Msa0416720:CDS |
| CCTTGAAGCAAAAGAAGAAA+AGG | 0.467395 | 3_2:+63619942 | Msa0416720:CDS |
| TTTAATTAATCGGATATGAA+GGG | 0.467792 | 3_2:-63617810 | None:intergenic |
| TCTCTGAAGTGCTTTGATGA+TGG | 0.473673 | 3_2:-63619386 | None:intergenic |
| ATAGTACCGCCTCTCAAACT+AGG | 0.474142 | 3_2:-63620027 | None:intergenic |
| GAGGTAATGCGTGTACCTTT+CGG | 0.479808 | 3_2:-63620819 | None:intergenic |
| TACCATCGTTACTCCGATGA+AGG | 0.479952 | 3_2:+63618118 | Msa0416720:CDS |
| GAGGGTATGGATGTTTAATA+CGG | 0.482940 | 3_2:-63624105 | None:intergenic |
| TATCGATGAAGATGATCTTA+AGG | 0.483895 | 3_2:+63620169 | Msa0416720:CDS |
| GTTTAAACTCGGCGTATTGG+AGG | 0.484480 | 3_2:+63618072 | Msa0416720:CDS |
| CTTTGTTTGGCAAATGGTGA+TGG | 0.484594 | 3_2:-63624082 | None:intergenic |
| AACAAAACCGCATCCTCCAT+TGG | 0.486065 | 3_2:-63621242 | None:intergenic |
| CCATTAATTGGGTGGATGCA+TGG | 0.487420 | 3_2:+63620855 | Msa0416720:CDS |
| CGTGTGAGTTCTGTGTTTAG+AGG | 0.489330 | 3_2:-63617852 | None:intergenic |
| TCTTCAGGCCAAAGTGGCTC+AGG | 0.489930 | 3_2:+63619686 | Msa0416720:CDS |
| GAAAACTGGTCCCTTTAATG+AGG | 0.490382 | 3_2:+63621285 | Msa0416720:CDS |
| AGATTCCGATGAAGTGGAAA+AGG | 0.490569 | 3_2:+63620199 | Msa0416720:CDS |
| TCACATTATTACATATTCAC+TGG | 0.491218 | 3_2:+63619310 | Msa0416720:CDS |
| AAAAGAAGAAAAGGAAAATG+AGG | 0.493335 | 3_2:+63619951 | Msa0416720:CDS |
| GATGGTTGCATTTAACATGC+AGG | 0.494100 | 3_2:+63620884 | Msa0416720:CDS |
| CAAGCTTCTTCATCACCTAA+AGG | 0.494465 | 3_2:-63619991 | None:intergenic |
| AAGGACTTCAACATCATCCT+TGG | 0.496121 | 3_2:-63619449 | None:intergenic |
| TTGGTTGCCTTCTTGGAATG+AGG | 0.497276 | 3_2:+63622063 | Msa0416720:CDS |
| CTTTAGGTGATGAAGAAGCT+TGG | 0.501759 | 3_2:+63619992 | Msa0416720:CDS |
| ACATCATCCTTGGAGTCATT+AGG | 0.504800 | 3_2:-63619439 | None:intergenic |
| TAATCGGATATGAAGGGGAA+TGG | 0.511911 | 3_2:-63617804 | None:intergenic |
| TCCTTCAAGGTTTCTGAGGT+AGG | 0.514356 | 3_2:-63619856 | None:intergenic |
| AGCACTTCAGAGAGGTGTTA+GGG | 0.516302 | 3_2:+63619396 | Msa0416720:CDS |
| CGGTACTATAGCTGATTACA+AGG | 0.516593 | 3_2:+63620041 | Msa0416720:CDS |
| GAAGCCTAAAGGCGGAATAG+TGG | 0.517032 | 3_2:+63620274 | Msa0416720:CDS |
| ATGCGAAGCAGTGCCAGCTC+CGG | 0.517670 | 3_2:-63622109 | None:intergenic |
| CGGCGTATTGGAGGCACCGC+CGG | 0.517697 | 3_2:+63618081 | Msa0416720:CDS |
| GTAACTAACCTGAGCCACTT+TGG | 0.519283 | 3_2:-63619694 | None:intergenic |
| CAAGGAATGTTTAAAGCCAA+TGG | 0.521167 | 3_2:+63621226 | Msa0416720:CDS |
| ATCGTTACTCCGATGAAGGC+GGG | 0.525010 | 3_2:+63618122 | Msa0416720:CDS |
| TGCCGGCGCGGGTTTAAACT+CGG | 0.525526 | 3_2:+63618061 | Msa0416720:CDS |
| AATCAGGTGACTGTATATAT+GGG | 0.528124 | 3_2:+63621471 | Msa0416720:intron |
| AGGTGAAGGAAATTCCTTCA+AGG | 0.530092 | 3_2:-63619869 | None:intergenic |
| TGGCCTGAAGATCAGGAGTA+AGG | 0.530572 | 3_2:-63619674 | None:intergenic |
| CATATCAACCAAGCCGCCTA+AGG | 0.532591 | 3_2:+63619915 | Msa0416720:CDS |
| TTTGCTTCAAGGTACTCCTT+AGG | 0.533133 | 3_2:-63619931 | None:intergenic |
| ATTATAATCCATTAATTGGG+TGG | 0.536189 | 3_2:+63620847 | Msa0416720:CDS |
| ACAGCGTATGTTTCTGCTGC+CGG | 0.536369 | 3_2:+63618044 | Msa0416720:CDS |
| TGGTAAAGCTCCTTTATCTC+CGG | 0.542445 | 3_2:-63618100 | None:intergenic |
| TGTCATAATCCCGCCTTCAT+CGG | 0.543605 | 3_2:-63618131 | None:intergenic |
| TTTAAAGCCAATGGAGGATG+CGG | 0.547215 | 3_2:+63621235 | Msa0416720:CDS |
| ATTCATGCTGGGAAGCCTAA+AGG | 0.547723 | 3_2:+63620263 | Msa0416720:CDS |
| GGAGGAAGATTCCGATGAAG+TGG | 0.549548 | 3_2:+63620193 | Msa0416720:CDS |
| AAGTGAGTCACAGCTCGAAA+AGG | 0.551984 | 3_2:+63620340 | Msa0416720:CDS |
| CGGATATTCTGACGCAACGA+AGG | 0.555918 | 3_2:-63619628 | None:intergenic |
| GCTTAATTGCTATTCATGCT+GGG | 0.557069 | 3_2:+63620252 | Msa0416720:CDS |
| TTAATTAATCGGATATGAAG+GGG | 0.557166 | 3_2:-63617809 | None:intergenic |
| GGAAAATGAGGAATCACAGA+AGG | 0.558540 | 3_2:+63619963 | Msa0416720:CDS |
| TAGTACCGCCTCTCAAACTA+GGG | 0.558608 | 3_2:-63620026 | None:intergenic |
| TGAAGATGATCTTAAGGAGG+AGG | 0.558834 | 3_2:+63620175 | Msa0416720:CDS |
| ACAATGGTAAACTCATATCT+TGG | 0.558961 | 3_2:-63619288 | None:intergenic |
| GTTTGTTTGGATAAAGAAGC+TGG | 0.560498 | 3_2:-63624143 | None:intergenic |
| TAATGGATTATAATTTGATG+AGG | 0.561590 | 3_2:-63620838 | None:intergenic |
| GTGGATGCATGGAGCTCAGA+TGG | 0.561990 | 3_2:+63620866 | Msa0416720:CDS |
| GCCAGCTCCGGAACTGAAAG+CGG | 0.564044 | 3_2:-63622097 | None:intergenic |
| TTGAGTATCTTTCATCGTAG+AGG | 0.565571 | 3_2:+63618247 | Msa0416720:CDS |
| TCCTGATCTTCAGGCCAAAG+TGG | 0.568046 | 3_2:+63619680 | Msa0416720:CDS |
| GTATGTTTCTGCTGCCGGCG+CGG | 0.570250 | 3_2:+63618049 | Msa0416720:CDS |
| GCTTCAAGGTACTCCTTAGG+CGG | 0.576983 | 3_2:-63619928 | None:intergenic |
| AGATCTCTTTGGTTGATGCA+AGG | 0.584104 | 3_2:+63621208 | Msa0416720:CDS |
| CATCGTTACTCCGATGAAGG+CGG | 0.584531 | 3_2:+63618121 | Msa0416720:CDS |
| GTTTGGATAAAGAAGCTGGT+GGG | 0.585387 | 3_2:-63624139 | None:intergenic |
| AAAAGGATTACCCCAGTGGA+AGG | 0.585997 | 3_2:-63618328 | None:intergenic |
| TCGAATACCTCATTCCAAGA+AGG | 0.587279 | 3_2:-63622070 | None:intergenic |
| CCAGCTCCGGAACTGAAAGC+GGG | 0.591393 | 3_2:-63622096 | None:intergenic |
| ACCCCAGTGGAAGGTAAGAG+AGG | 0.593533 | 3_2:-63618319 | None:intergenic |
| GGTAAACTTACATTCCATGA+AGG | 0.594580 | 3_2:-63619468 | None:intergenic |
| CGCCGAGTTTAAACCCGCGC+CGG | 0.595676 | 3_2:-63618063 | None:intergenic |
| CTGTATATATGGGAGAAGGA+TGG | 0.596370 | 3_2:+63621481 | Msa0416720:CDS |
| ATTCCATTACATTCCCGCAA+AGG | 0.598056 | 3_2:+63622223 | Msa0416720:CDS |
| CGCCTTCATCGGAGTAACGA+TGG | 0.598173 | 3_2:-63618120 | None:intergenic |
| CACCTCCAGACTTCTATGCA+AGG | 0.598961 | 3_2:+63621541 | Msa0416720:CDS |
| GTGACTGTATATATGGGAGA+AGG | 0.603839 | 3_2:+63621477 | Msa0416720:CDS |
| TTCTATCTTTAGCAAAACAG+TGG | 0.606079 | 3_2:+63620146 | Msa0416720:intron |
| AAATTCCTTCAAGGTTTCTG+AGG | 0.606668 | 3_2:-63619860 | None:intergenic |
| ACCTCCAGACTTCTATGCAA+GGG | 0.606755 | 3_2:+63621542 | Msa0416720:CDS |
| CCAAACATGCTTACCTGTGT+GGG | 0.607645 | 3_2:+63622177 | Msa0416720:CDS |
| AAAGAAGTCCCTAGTTTGAG+AGG | 0.608524 | 3_2:+63620018 | Msa0416720:CDS |
| AAACATTTGATAAGTGCCAC+AGG | 0.609405 | 3_2:-63619585 | None:intergenic |
| CCTGTGTGGGAACTAAGAAG+TGG | 0.609701 | 3_2:+63622190 | Msa0416720:CDS |
| TATATGGCCTAATGACTCCA+AGG | 0.611089 | 3_2:+63619432 | Msa0416720:CDS |
| TGTTTGGCAAATGGTGATGG+AGG | 0.613484 | 3_2:-63624079 | None:intergenic |
| AATATGTAATAATGTGACAA+TGG | 0.622860 | 3_2:-63619304 | None:intergenic |
| CAAATGGTGATGGAGGATGC+CGG | 0.625486 | 3_2:-63624072 | None:intergenic |
| TCTGAGAAGGATGACTTTGG+TGG | 0.635751 | 3_2:+63622154 | Msa0416720:CDS |
| CCAGTGGAAGGTAAGAGAGG+AGG | 0.636569 | 3_2:-63618316 | None:intergenic |
| TAAAGCTCCTTTATCTCCGG+CGG | 0.638010 | 3_2:-63618097 | None:intergenic |
| CGATGAAGATGATCTTAAGG+AGG | 0.639227 | 3_2:+63620172 | Msa0416720:CDS |
| GAAAATGAGGAATCACAGAA+GGG | 0.642176 | 3_2:+63619964 | Msa0416720:CDS |
| CAGGACATTGACGACTCCTG+TGG | 0.642402 | 3_2:+63619569 | Msa0416720:intron |
| CCACTTCTTAGTTCCCACAC+AGG | 0.642948 | 3_2:-63622190 | None:intergenic |
| ACCCTTGCATAGAAGTCTGG+AGG | 0.646972 | 3_2:-63621543 | None:intergenic |
| TGAGTATGACATGTCTGAGA+AGG | 0.650839 | 3_2:+63622141 | Msa0416720:CDS |
| AATAGTGGAATGTCTCAAAG+TGG | 0.653150 | 3_2:+63620289 | Msa0416720:CDS |
| TTAGGTGATGAAGAAGCTTG+GGG | 0.654802 | 3_2:+63619994 | Msa0416720:CDS |
| ATGTCTGAGAAGGATGACTT+TGG | 0.654831 | 3_2:+63622151 | Msa0416720:CDS |
| GCCAAACATGCTTACCTGTG+TGG | 0.670365 | 3_2:+63622176 | Msa0416720:CDS |
| CTGTACAAAATATATATCAG+AGG | 0.673312 | 3_2:-63622306 | None:intergenic |
| CCTGAAGATCAGGAGTAAGG+TGG | 0.674793 | 3_2:-63619671 | None:intergenic |
| GGAATGTTTAAAGCCAATGG+AGG | 0.677096 | 3_2:+63621229 | Msa0416720:CDS |
| ATATTGCGAGTGTATCCGAA+AGG | 0.679225 | 3_2:+63620804 | Msa0416720:CDS |
| GAAGTCCCTAGTTTGAGAGG+CGG | 0.688180 | 3_2:+63620021 | Msa0416720:CDS |
| TGTTTGGATAAAGAAGCTGG+TGG | 0.693796 | 3_2:-63624140 | None:intergenic |
| TCCTCTCTTACCTTCCACTG+GGG | 0.713044 | 3_2:+63618318 | Msa0416720:CDS |
| ACTAACTACCAATAAGCGCG+TGG | 0.713291 | 3_2:-63617903 | None:intergenic |
| ATCATCAAAGCACTTCAGAG+AGG | 0.716058 | 3_2:+63619388 | Msa0416720:CDS |
| CATGCTGGGAAGCCTAAAGG+CGG | 0.717537 | 3_2:+63620266 | Msa0416720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTATTTTTAATTAAT+CGG | - | chr3_2:63617823-63617842 | None:intergenic | 0.0% |
| !! | ATAATATTAATTATAAATTA+GGG | - | chr3_2:63622768-63622787 | None:intergenic | 0.0% |
| !! | AATAATATTAATTATAAATT+AGG | - | chr3_2:63622769-63622788 | None:intergenic | 0.0% |
| !! | AAAAAAAGTAAAAGAAAAAA+AGG | - | chr3_2:63618348-63618367 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTTTTGAAAACT+CGG | - | chr3_2:63620557-63620576 | None:intergenic | 10.0% |
| !! | AGCAAAAATAAATATATTAA+TGG | - | chr3_2:63621160-63621179 | None:intergenic | 10.0% |
| !! | TCAATAAAATAAACAATATA+CGG | - | chr3_2:63622370-63622389 | None:intergenic | 10.0% |
| !!! | CAAATTAACATATTTTATTT+TGG | - | chr3_2:63622899-63622918 | None:intergenic | 10.0% |
| !! | CAAAATAAAATATGTTAATT+TGG | + | chr3_2:63622897-63622916 | Msa0416720:intron | 10.0% |
| !!! | ATTTAATTTAATAGTCAACA+AGG | - | chr3_2:63618485-63618504 | None:intergenic | 15.0% |
| !! | TTTGTAACTCATAATAATAT+TGG | + | chr3_2:63618524-63618543 | Msa0416720:intron | 15.0% |
| !! | TTGTAACTCATAATAATATT+GGG | + | chr3_2:63618525-63618544 | Msa0416720:intron | 15.0% |
| !! | ATTTCTTGATTAATTAATTC+CGG | - | chr3_2:63619025-63619044 | None:intergenic | 15.0% |
| !! | TATCTCATATTTATTTAATC+CGG | - | chr3_2:63620503-63620522 | None:intergenic | 15.0% |
| !! | TCAAATTATAATCCATTAAT+TGG | + | chr3_2:63620843-63620862 | Msa0416720:CDS | 15.0% |
| !! | CAAATTATAATCCATTAATT+GGG | + | chr3_2:63620844-63620863 | Msa0416720:CDS | 15.0% |
| !!! | TAATATATTTATTTTTGCTG+TGG | + | chr3_2:63621161-63621180 | Msa0416720:intron | 15.0% |
| !!! | AATATATTTATTTTTGCTGT+GGG | + | chr3_2:63621162-63621181 | Msa0416720:intron | 15.0% |
| !! | TCAAATAAAATAATTCATTC+AGG | - | chr3_2:63621596-63621615 | None:intergenic | 15.0% |
| !! | TATTAATTATAAATTAGGGT+TGG | - | chr3_2:63622764-63622783 | None:intergenic | 15.0% |
| !!! | TATAATATTTTTTTGCATGA+GGG | - | chr3_2:63623658-63623677 | None:intergenic | 15.0% |
| !! | AAAAATAAATTGGATTAAAC+GGG | - | chr3_2:63624174-63624193 | None:intergenic | 15.0% |
| !! | GAAAAATAAATTGGATTAAA+CGG | - | chr3_2:63624175-63624194 | None:intergenic | 15.0% |
| !! | AGGAAATTAGAAAAATAAAT+TGG | - | chr3_2:63624184-63624203 | None:intergenic | 15.0% |
| !!! | TTTTTGAATGTTTTTTCAAA+GGG | - | chr3_2:63624214-63624233 | None:intergenic | 15.0% |
| !! | TTTAATTAATCGGATATGAA+GGG | - | chr3_2:63617813-63617832 | None:intergenic | 20.0% |
| !!! | TTTTAATTAATCGGATATGA+AGG | - | chr3_2:63617814-63617833 | None:intergenic | 20.0% |
| !! | ACAAACAAAGAATCAAAAAA+TGG | + | chr3_2:63617997-63618016 | Msa0416720:exon | 20.0% |
| !!! | GTAATTTGATTGTGTTTTTT+TGG | + | chr3_2:63618375-63618394 | Msa0416720:intron | 20.0% |
| !! | TTTCTTGATTAATTAATTCC+GGG | - | chr3_2:63619024-63619043 | None:intergenic | 20.0% |
| !! | AATATGTAATAATGTGACAA+TGG | - | chr3_2:63619307-63619326 | None:intergenic | 20.0% |
| !! | AATGTTGTATATAAATTGCA+AGG | + | chr3_2:63620078-63620097 | Msa0416720:intron | 20.0% |
| !!! | TTTAATTTTGTATGTGAGTT+TGG | + | chr3_2:63620104-63620123 | Msa0416720:intron | 20.0% |
| !!! | CATTTATATTCAATTAGCTT+TGG | + | chr3_2:63620692-63620711 | Msa0416720:intron | 20.0% |
| !!! | TAATGGATTATAATTTGATG+AGG | - | chr3_2:63620841-63620860 | None:intergenic | 20.0% |
| !!! | CTAAGATTTAAGATGATTTA+TGG | + | chr3_2:63621569-63621588 | Msa0416720:intron | 20.0% |
| !!! | TTTTCATAACAGTATCAAAA+GGG | - | chr3_2:63622021-63622040 | None:intergenic | 20.0% |
| !!! | TTTTTCATAACAGTATCAAA+AGG | - | chr3_2:63622022-63622041 | None:intergenic | 20.0% |
| !! | AACCTTTATAAAAGATCTAT+GGG | - | chr3_2:63622599-63622618 | None:intergenic | 20.0% |
| !! | TAACCTTTATAAAAGATCTA+TGG | - | chr3_2:63622600-63622619 | None:intergenic | 20.0% |
| !! | TTATAAATTCCATTCATTCA+TGG | - | chr3_2:63622815-63622834 | None:intergenic | 20.0% |
| !!! | TTTAGTGTAGATTATTTTGA+AGG | - | chr3_2:63623195-63623214 | None:intergenic | 20.0% |
| !! | CAAAATAATATTCTTTGTTC+GGG | - | chr3_2:63623409-63623428 | None:intergenic | 20.0% |
| !! | CCAAAATAATATTCTTTGTT+CGG | - | chr3_2:63623410-63623429 | None:intergenic | 20.0% |
| !!! | CGAACAAAGAATATTATTTT+GGG | + | chr3_2:63623408-63623427 | Msa0416720:intron | 20.0% |
| !!! | GTATAATATTTTTTTGCATG+AGG | - | chr3_2:63623659-63623678 | None:intergenic | 20.0% |
| !!! | TTTTGAATGTTTTTTCAAAG+GGG | - | chr3_2:63624213-63624232 | None:intergenic | 20.0% |
| !!! | CTTTTTGAATGTTTTTTCAA+AGG | - | chr3_2:63624215-63624234 | None:intergenic | 20.0% |
| ! | TTAATTAATCGGATATGAAG+GGG | - | chr3_2:63617812-63617831 | None:intergenic | 25.0% |
| !! | ATAGTTGTTCAGTTTCTTTT+TGG | + | chr3_2:63618416-63618435 | Msa0416720:intron | 25.0% |
| ! | TCATCATGAATTTCTATAAC+TGG | + | chr3_2:63618551-63618570 | Msa0416720:intron | 25.0% |
| ! | TAACTTCATTACTCTATGTT+TGG | + | chr3_2:63618577-63618596 | Msa0416720:intron | 25.0% |
| !! | GCAGATAAAATTGATTTATG+AGG | + | chr3_2:63618613-63618632 | Msa0416720:intron | 25.0% |
| !! | TAGATAAAGTGATTTGTGTT+TGG | + | chr3_2:63618895-63618914 | Msa0416720:intron | 25.0% |
| ! | TTCTTGATTAATTAATTCCG+GGG | - | chr3_2:63619023-63619042 | None:intergenic | 25.0% |
| !! | GTAATTTTTGTGAACTATGT+TGG | + | chr3_2:63619210-63619229 | Msa0416720:intron | 25.0% |
| ! | TCACATTATTACATATTCAC+TGG | + | chr3_2:63619310-63619329 | Msa0416720:CDS | 25.0% |
| ! | TGTTGGAGATATAATTCAAA+CGG | - | chr3_2:63619492-63619511 | None:intergenic | 25.0% |
| !! | TCATCCATGTATTTTACTAA+TGG | + | chr3_2:63619525-63619544 | Msa0416720:intron | 25.0% |
| ! | AACCATCTAAAAATTGAACA+GGG | - | chr3_2:63619806-63619825 | None:intergenic | 25.0% |
| ! | TAACCATCTAAAAATTGAAC+AGG | - | chr3_2:63619807-63619826 | None:intergenic | 25.0% |
| !!! | ATCCTTTTTTTAAGTGATTC+AGG | - | chr3_2:63619892-63619911 | None:intergenic | 25.0% |
| ! | AAAAGAAGAAAAGGAAAATG+AGG | + | chr3_2:63619951-63619970 | Msa0416720:CDS | 25.0% |
| !! | TATAATTTTACCTGTTGCAT+TGG | + | chr3_2:63620451-63620470 | Msa0416720:intron | 25.0% |
| ! | TTTAATCCGGTAACAATAAA+AGG | - | chr3_2:63620490-63620509 | None:intergenic | 25.0% |
| ! | AAAATATTTGTCCTTGACAA+TGG | + | chr3_2:63620581-63620600 | Msa0416720:intron | 25.0% |
| !!! | TTAGTACACTGTTTTTTAGA+TGG | + | chr3_2:63620621-63620640 | Msa0416720:intron | 25.0% |
| ! | ATTATAATCCATTAATTGGG+TGG | + | chr3_2:63620847-63620866 | Msa0416720:CDS | 25.0% |
| !! | ATTCGAGGCAATAATTTTTA+AGG | + | chr3_2:63620984-63621003 | Msa0416720:intron | 25.0% |
| !! | TTGAGTAATGACTTTTACAA+TGG | + | chr3_2:63621376-63621395 | Msa0416720:intron | 25.0% |
| ! | TATTTGATAAACTCTTATGC+AGG | + | chr3_2:63621979-63621998 | Msa0416720:intron | 25.0% |
| ! | GAAAAAAACAAAGTCAATAG+AGG | + | chr3_2:63622036-63622055 | Msa0416720:CDS | 25.0% |
| ! | CTGTACAAAATATATATCAG+AGG | - | chr3_2:63622309-63622328 | None:intergenic | 25.0% |
| ! | TATTCATGCAAATACCATAA+GGG | - | chr3_2:63622404-63622423 | None:intergenic | 25.0% |
| ! | ATATTCATGCAAATACCATA+AGG | - | chr3_2:63622405-63622424 | None:intergenic | 25.0% |
| ! | GTATTTGCATGAATATCTAA+GGG | + | chr3_2:63622409-63622428 | Msa0416720:intron | 25.0% |
| !! | ATCCCATAGATCTTTTATAA+AGG | + | chr3_2:63622594-63622613 | Msa0416720:intron | 25.0% |
| ! | TCTTAAAAACCATGAATGAA+TGG | + | chr3_2:63622803-63622822 | Msa0416720:intron | 25.0% |
| ! | ATGATGTTATGTTTACTTCT+TGG | - | chr3_2:63622846-63622865 | None:intergenic | 25.0% |
| ! | CTAAGATATTAACCTCTTTA+TGG | - | chr3_2:63623112-63623131 | None:intergenic | 25.0% |
| ! | GAATTGAAATCTGTTTAAGT+AGG | + | chr3_2:63623150-63623169 | Msa0416720:intron | 25.0% |
| !! | CCGAACAAAGAATATTATTT+TGG | + | chr3_2:63623407-63623426 | Msa0416720:intron | 25.0% |
| !!! | TTATTAGAGATAACTTGTTG+TGG | - | chr3_2:63623447-63623466 | None:intergenic | 25.0% |
| ! | CTAAATTCACAAACATGTTA+TGG | - | chr3_2:63623530-63623549 | None:intergenic | 25.0% |
| !! | GTTTAATGACAATTTTGTGA+GGG | - | chr3_2:63623900-63623919 | None:intergenic | 25.0% |
| !!! | TTTGAATGTTTTTTCAAAGG+GGG | - | chr3_2:63624212-63624231 | None:intergenic | 25.0% |
| ! | TTCAAAAAGAGATTCAATTG+AGG | + | chr3_2:63624226-63624245 | Msa0416720:three_prime_UTR | 25.0% |
| !!! | ACGCTGTATGTTTGTTTTTT+CGG | - | chr3_2:63618031-63618050 | None:intergenic | 30.0% |
| ! | AGTTTCTTCAAGTTTCTCTT+CGG | + | chr3_2:63618283-63618302 | Msa0416720:CDS | 30.0% |
| !!! | TCAGTTTCTTTTTGGTGTTA+TGG | + | chr3_2:63618424-63618443 | Msa0416720:intron | 30.0% |
| !! | AAAAGTGATTTTGACGTGTT+TGG | + | chr3_2:63618639-63618658 | Msa0416720:intron | 30.0% |
| ! | ATTGATTCTAACTTGAAGCT+AGG | + | chr3_2:63618695-63618714 | Msa0416720:intron | 30.0% |
| !! | CTCACTTTTAAGTGTATGTT+TGG | + | chr3_2:63618802-63618821 | Msa0416720:intron | 30.0% |
| !! | TATAGAGTTAGAGTTGCTTT+TGG | + | chr3_2:63619057-63619076 | Msa0416720:intron | 30.0% |
| ACAATGGTAAACTCATATCT+TGG | - | chr3_2:63619291-63619310 | None:intergenic | 30.0% | |
| GGTCATAATTCATATCTAAC+TGG | + | chr3_2:63619331-63619350 | Msa0416720:CDS | 30.0% | |
| ATGAATCTTCGTCAAATTGT+TGG | - | chr3_2:63619509-63619528 | None:intergenic | 30.0% | |
| GTTGCCATTAGTAAAATACA+TGG | - | chr3_2:63619532-63619551 | None:intergenic | 30.0% | |
| ACAAAATGATGCAATCTTAC+AGG | + | chr3_2:63619550-63619569 | Msa0416720:intron | 30.0% | |
| CAAATGTTTGACGTCTATTA+AGG | + | chr3_2:63619599-63619618 | Msa0416720:CDS | 30.0% | |
| !! | TCTTCTAAGGTTATTACAAC+CGG | - | chr3_2:63619651-63619670 | None:intergenic | 30.0% |
| TAGATGGTTACTCAAACATT+TGG | + | chr3_2:63619817-63619836 | Msa0416720:intron | 30.0% | |
| !!! | TTTTTAAGTGATTCAGGTGA+AGG | - | chr3_2:63619886-63619905 | None:intergenic | 30.0% |
| CACCTGAATCACTTAAAAAA+AGG | + | chr3_2:63619887-63619906 | Msa0416720:CDS | 30.0% | |
| ! | ATTTTGTATGTGAGTTTGGT+TGG | + | chr3_2:63620108-63620127 | Msa0416720:intron | 30.0% |
| TTCTATCTTTAGCAAAACAG+TGG | + | chr3_2:63620146-63620165 | Msa0416720:intron | 30.0% | |
| TATCGATGAAGATGATCTTA+AGG | + | chr3_2:63620169-63620188 | Msa0416720:CDS | 30.0% | |
| CATATGGAAAAGAAATTGTC+AGG | + | chr3_2:63620372-63620391 | Msa0416720:CDS | 30.0% | |
| ! | TTCGATCCTTTTATTGTTAC+CGG | + | chr3_2:63620481-63620500 | Msa0416720:intron | 30.0% |
| AATATTTGTCCTTGATTCCT+TGG | + | chr3_2:63620523-63620542 | Msa0416720:intron | 30.0% | |
| ! | TTTTTAGATGGCATATCGAA+CGG | + | chr3_2:63620633-63620652 | Msa0416720:intron | 30.0% |
| TATATAACAAGAAACCTGTG+AGG | + | chr3_2:63620938-63620957 | Msa0416720:intron | 30.0% | |
| !!! | ATATTTATTTTTGCTGTGGG+TGG | + | chr3_2:63621165-63621184 | Msa0416720:intron | 30.0% |
| ! | CCAGTTTTCAATAGAAAATC+AGG | - | chr3_2:63621274-63621293 | None:intergenic | 30.0% |
| ! | CCTGATTTTCTATTGAAAAC+TGG | + | chr3_2:63621271-63621290 | Msa0416720:CDS | 30.0% |
| ! | AATGACTTTTACAATGGACA+AGG | + | chr3_2:63621382-63621401 | Msa0416720:intron | 30.0% |
| ! | ATGACTTTTACAATGGACAA+GGG | + | chr3_2:63621383-63621402 | Msa0416720:intron | 30.0% |
| AGTCTAGAGAAACTTAATGA+TGG | - | chr3_2:63621422-63621441 | None:intergenic | 30.0% | |
| TCTAGACTTGATTCTAACAA+AGG | + | chr3_2:63621434-63621453 | Msa0416720:intron | 30.0% | |
| TAATCAGGTGACTGTATATA+TGG | + | chr3_2:63621470-63621489 | Msa0416720:intron | 30.0% | |
| AATCAGGTGACTGTATATAT+GGG | + | chr3_2:63621471-63621490 | Msa0416720:intron | 30.0% | |
| ATAACTGGAACATAACTGTT+TGG | - | chr3_2:63621860-63621879 | None:intergenic | 30.0% | |
| ! | CGAAGCATTAGAAAAACATA+TGG | - | chr3_2:63621892-63621911 | None:intergenic | 30.0% |
| TGTTGTATTTATCTCCTTTG+CGG | - | chr3_2:63622240-63622259 | None:intergenic | 30.0% | |
| ACTCTTGCGTTATAATGTAA+TGG | - | chr3_2:63622332-63622351 | None:intergenic | 30.0% | |
| !!! | TGATGTTTTTTTTGCCCTTA+TGG | + | chr3_2:63622387-63622406 | Msa0416720:intron | 30.0% |
| GGTATTTGCATGAATATCTA+AGG | + | chr3_2:63622408-63622427 | Msa0416720:intron | 30.0% | |
| ! | AAGGGTGTGAGAATAATTAT+CGG | + | chr3_2:63622427-63622446 | Msa0416720:intron | 30.0% |
| ATCAAACAAAACACACTCTT+TGG | - | chr3_2:63622474-63622493 | None:intergenic | 30.0% | |
| ! | ATGAGACATCTTATTTCGTA+TGG | - | chr3_2:63622509-63622528 | None:intergenic | 30.0% |
| ! | TAAGATGTCTCATTGTGTTT+TGG | + | chr3_2:63622516-63622535 | Msa0416720:intron | 30.0% |
| !! | GTTTTGGATTTTGACATTAG+TGG | + | chr3_2:63622532-63622551 | Msa0416720:intron | 30.0% |
| ATACTTCCTACACTATTGAA+CGG | - | chr3_2:63622576-63622595 | None:intergenic | 30.0% | |
| ! | AACATGTCTTTCTGTTCTTT+TGG | + | chr3_2:63622638-63622657 | Msa0416720:intron | 30.0% |
| ! | ACATGTCTTTCTGTTCTTTT+GGG | + | chr3_2:63622639-63622658 | Msa0416720:intron | 30.0% |
| !!! | TTCTTTTGGGGTTTCAAAAA+GGG | + | chr3_2:63622652-63622671 | Msa0416720:intron | 30.0% |
| AAGACCAAACACCAAAAATT+GGG | - | chr3_2:63622696-63622715 | None:intergenic | 30.0% | |
| !!! | GTCTTCCCTTGATTTTAATT+GGG | + | chr3_2:63622711-63622730 | Msa0416720:intron | 30.0% |
| AAAAAAGAACCAAGAGATCA+AGG | - | chr3_2:63622740-63622759 | None:intergenic | 30.0% | |
| CAAAACTCATACAAACAAGT+TGG | + | chr3_2:63623033-63623052 | Msa0416720:intron | 30.0% | |
| ! | TGTCTTTTGATCTTCAACTA+TGG | - | chr3_2:63623067-63623086 | None:intergenic | 30.0% |
| TTTCACTTTCAACCATAAAG+AGG | + | chr3_2:63623097-63623116 | Msa0416720:intron | 30.0% | |
| ACATGTTCAACAATACTGTA+AGG | + | chr3_2:63623284-63623303 | Msa0416720:intron | 30.0% | |
| TTTCTTACTTGTTCGTTCTT+CGG | - | chr3_2:63623359-63623378 | None:intergenic | 30.0% | |
| !! | CAAATGTTGATGAGTCTTTT+CGG | - | chr3_2:63623554-63623573 | None:intergenic | 30.0% |
| ! | GGTTTAATGACAATTTTGTG+AGG | - | chr3_2:63623901-63623920 | None:intergenic | 30.0% |
| !! | ATGTTTAATACGGCTTTGTT+TGG | - | chr3_2:63624098-63624117 | None:intergenic | 30.0% |
| GAAACACAAGCAATCATTGA+TGG | + | chr3_2:63618214-63618233 | Msa0416720:CDS | 35.0% | |
| TTGAGTATCTTTCATCGTAG+AGG | + | chr3_2:63618247-63618266 | Msa0416720:CDS | 35.0% | |
| !! | TCTATGTTTGGTTCTACGTT+TGG | + | chr3_2:63618589-63618608 | Msa0416720:intron | 35.0% |
| CATGTAGAGTGGTTTATGTT+TGG | - | chr3_2:63618779-63618798 | None:intergenic | 35.0% | |
| AAAGTGAGTTACATGTAGAG+TGG | - | chr3_2:63618790-63618809 | None:intergenic | 35.0% | |
| !! | GCACTTGAAAAGCACTTATA+AGG | + | chr3_2:63619079-63619098 | Msa0416720:intron | 35.0% |
| ! | ACTTATAAGGCATCTAGAAG+TGG | + | chr3_2:63619092-63619111 | Msa0416720:intron | 35.0% |
| GAACTATGTTGGTGTGATAA+TGG | + | chr3_2:63619221-63619240 | Msa0416720:intron | 35.0% | |
| ! | CTGTTTCTTTGTGTGATTTC+AGG | + | chr3_2:63619261-63619280 | Msa0416720:intron | 35.0% |
| GGGTGATTGAATTGGATATA+TGG | + | chr3_2:63619416-63619435 | Msa0416720:CDS | 35.0% | |
| GGTAAACTTACATTCCATGA+AGG | - | chr3_2:63619471-63619490 | None:intergenic | 35.0% | |
| AAACATTTGATAAGTGCCAC+AGG | - | chr3_2:63619588-63619607 | None:intergenic | 35.0% | |
| !! | AGCCCTGTTCAATTTTTAGA+TGG | + | chr3_2:63619801-63619820 | Msa0416720:intron | 35.0% |
| AAATTCCTTCAAGGTTTCTG+AGG | - | chr3_2:63619863-63619882 | None:intergenic | 35.0% | |
| ! | CCTTTTCTTCTTTTGCTTCA+AGG | - | chr3_2:63619945-63619964 | None:intergenic | 35.0% |
| CCTTGAAGCAAAAGAAGAAA+AGG | + | chr3_2:63619942-63619961 | Msa0416720:CDS | 35.0% | |
| GAAAATGAGGAATCACAGAA+GGG | + | chr3_2:63619964-63619983 | Msa0416720:CDS | 35.0% | |
| TTTAGGTGATGAAGAAGCTT+GGG | + | chr3_2:63619993-63620012 | Msa0416720:CDS | 35.0% | |
| ! | GCTTAATTGCTATTCATGCT+GGG | + | chr3_2:63620252-63620271 | Msa0416720:CDS | 35.0% |
| ! | AATAGTGGAATGTCTCAAAG+TGG | + | chr3_2:63620289-63620308 | Msa0416720:CDS | 35.0% |
| AATGTCTTGATACAGCTGAA+AGG | - | chr3_2:63621089-63621108 | None:intergenic | 35.0% | |
| ! | CAAGGAATGTTTAAAGCCAA+TGG | + | chr3_2:63621226-63621245 | Msa0416720:CDS | 35.0% |
| GGATCGAAAACCTCATTAAA+GGG | - | chr3_2:63621298-63621317 | None:intergenic | 35.0% | |
| AGGATCGAAAACCTCATTAA+AGG | - | chr3_2:63621299-63621318 | None:intergenic | 35.0% | |
| ! | ACCTTCAAAGTAGTTTTCGA+TGG | - | chr3_2:63621334-63621353 | None:intergenic | 35.0% |
| ! | GAAAACTACTTTGAAGGTGA+GGG | + | chr3_2:63621336-63621355 | Msa0416720:intron | 35.0% |
| GGTCATTCTTACTCTTAATC+AGG | + | chr3_2:63621455-63621474 | Msa0416720:intron | 35.0% | |
| !! | TTCCATAAGCTCTCTAAGAT+AGG | + | chr3_2:63621706-63621725 | Msa0416720:intron | 35.0% |
| AACCTATCTTAGAGAGCTTA+TGG | - | chr3_2:63621711-63621730 | None:intergenic | 35.0% | |
| ATATGGATGCTAGCTATAAC+TGG | - | chr3_2:63621875-63621894 | None:intergenic | 35.0% | |
| !! | GAAATGATAGAAGCACTGAA+GGG | - | chr3_2:63621954-63621973 | None:intergenic | 35.0% |
| !! | AGAAATGATAGAAGCACTGA+AGG | - | chr3_2:63621955-63621974 | None:intergenic | 35.0% |
| TGATAAACTCTTATGCAGGT+TGG | + | chr3_2:63621983-63622002 | Msa0416720:intron | 35.0% | |
| CAAAGTCAATAGAGGATAGT+TGG | + | chr3_2:63622044-63622063 | Msa0416720:CDS | 35.0% | |
| GTTGTATTTATCTCCTTTGC+GGG | - | chr3_2:63622239-63622258 | None:intergenic | 35.0% | |
| !! | GATTTTGACATTAGTGGCAA+AGG | + | chr3_2:63622538-63622557 | Msa0416720:intron | 35.0% |
| AGAAAGACATGTTTACCTCT+GGG | - | chr3_2:63622631-63622650 | None:intergenic | 35.0% | |
| ! | CATGTCTTTCTGTTCTTTTG+GGG | + | chr3_2:63622640-63622659 | Msa0416720:intron | 35.0% |
| !!! | GTTCTTTTGGGGTTTCAAAA+AGG | + | chr3_2:63622651-63622670 | Msa0416720:intron | 35.0% |
| GAAGACCAAACACCAAAAAT+TGG | - | chr3_2:63622697-63622716 | None:intergenic | 35.0% | |
| !! | GGTCTTCCCTTGATTTTAAT+TGG | + | chr3_2:63622710-63622729 | Msa0416720:intron | 35.0% |
| GGCAACCCAATTAAAATCAA+GGG | - | chr3_2:63622719-63622738 | None:intergenic | 35.0% | |
| AGGCAACCCAATTAAAATCA+AGG | - | chr3_2:63622720-63622739 | None:intergenic | 35.0% | |
| ! | CTTTTGATCTTCAACTATGG+TGG | - | chr3_2:63623064-63623083 | None:intergenic | 35.0% |
| CTAAAGTTAGCCAGATTAGA+TGG | + | chr3_2:63623210-63623229 | Msa0416720:intron | 35.0% | |
| ! | GTTAGTCAACTTGGTAACTT+AGG | - | chr3_2:63623266-63623285 | None:intergenic | 35.0% |
| GTTGAACATGTTAGTCAACT+TGG | - | chr3_2:63623275-63623294 | None:intergenic | 35.0% | |
| TCAAACAACGTCACCTTTAA+AGG | + | chr3_2:63623492-63623511 | Msa0416720:intron | 35.0% | |
| GCTAAAGGAATCTCCTTTAA+AGG | - | chr3_2:63623508-63623527 | None:intergenic | 35.0% | |
| CACAAACATGTTATGGCTAA+AGG | - | chr3_2:63623523-63623542 | None:intergenic | 35.0% | |
| !!! | TATTTTTTTGCATGAGGGAG+TGG | - | chr3_2:63623653-63623672 | None:intergenic | 35.0% |
| ! | TGGTTTAAGTTTGGGAAAAG+GGG | - | chr3_2:63623751-63623770 | None:intergenic | 35.0% |
| ! | GTGGTTTAAGTTTGGGAAAA+GGG | - | chr3_2:63623752-63623771 | None:intergenic | 35.0% |
| ! | AGTGGTTTAAGTTTGGGAAA+AGG | - | chr3_2:63623753-63623772 | None:intergenic | 35.0% |
| ! | GATGTGAGTGGTTTAAGTTT+GGG | - | chr3_2:63623759-63623778 | None:intergenic | 35.0% |
| ! | TGATGTGAGTGGTTTAAGTT+TGG | - | chr3_2:63623760-63623779 | None:intergenic | 35.0% |
| CCACCAAATTAAAAAGACGA+CGG | + | chr3_2:63623802-63623821 | Msa0416720:intron | 35.0% | |
| !! | GTTCCGTCGTCTTTTTAATT+TGG | - | chr3_2:63623808-63623827 | None:intergenic | 35.0% |
| !!! | ATGGGACGAAAACGTTTTTT+TGG | - | chr3_2:63623868-63623887 | None:intergenic | 35.0% |
| ! | TAATGACAATTTTGTGAGGG+TGG | - | chr3_2:63623897-63623916 | None:intergenic | 35.0% |
| AAATATGGTATAGAGGGTGA+TGG | - | chr3_2:63624010-63624029 | None:intergenic | 35.0% | |
| ! | GAGGGTATGGATGTTTAATA+CGG | - | chr3_2:63624108-63624127 | None:intergenic | 35.0% |
| GTTTGTTTGGATAAAGAAGC+TGG | - | chr3_2:63624146-63624165 | None:intergenic | 35.0% | |
| TAAACGGGACATTGTTTGTT+TGG | - | chr3_2:63624159-63624178 | None:intergenic | 35.0% | |
| TAATCGGATATGAAGGGGAA+TGG | - | chr3_2:63617807-63617826 | None:intergenic | 40.0% | |
| TGGTAAAGCTCCTTTATCTC+CGG | - | chr3_2:63618103-63618122 | None:intergenic | 40.0% | |
| CCTCAATCAGAAAGCTTCTA+AGG | - | chr3_2:63618165-63618184 | None:intergenic | 40.0% | |
| CCTTAGAAGCTTTCTGATTG+AGG | + | chr3_2:63618162-63618181 | Msa0416720:CDS | 40.0% | |
| GAAAAAAAGGATTACCCCAG+TGG | - | chr3_2:63618335-63618354 | None:intergenic | 40.0% | |
| TCTAACTTGAAGCTAGGACT+CGG | + | chr3_2:63618701-63618720 | Msa0416720:intron | 40.0% | |
| !! | GTGTATGTTTGGTTCTGCTT+TGG | + | chr3_2:63618813-63618832 | Msa0416720:intron | 40.0% |
| !! | GTATACTTGCTTTTAGTCCC+CGG | + | chr3_2:63619003-63619022 | Msa0416720:intron | 40.0% |
| CAAATGCATGTTTGGATCTG+CGG | - | chr3_2:63619161-63619180 | None:intergenic | 40.0% | |
| GCAGATCCAAACATGCATTT+GGG | + | chr3_2:63619160-63619179 | Msa0416720:intron | 40.0% | |
| TCAACACCCAAATGCATGTT+TGG | - | chr3_2:63619169-63619188 | None:intergenic | 40.0% | |
| !! | CTCTGAAGTGCTTTGATGAT+GGG | - | chr3_2:63619388-63619407 | None:intergenic | 40.0% |
| !! | TCTCTGAAGTGCTTTGATGA+TGG | - | chr3_2:63619389-63619408 | None:intergenic | 40.0% |
| ! | ATCATCAAAGCACTTCAGAG+AGG | + | chr3_2:63619388-63619407 | Msa0416720:CDS | 40.0% |
| AGGTGTTAGGGTGATTGAAT+TGG | + | chr3_2:63619408-63619427 | Msa0416720:CDS | 40.0% | |
| TATATGGCCTAATGACTCCA+AGG | + | chr3_2:63619432-63619451 | Msa0416720:CDS | 40.0% | |
| ACATCATCCTTGGAGTCATT+AGG | - | chr3_2:63619442-63619461 | None:intergenic | 40.0% | |
| AAGGACTTCAACATCATCCT+TGG | - | chr3_2:63619452-63619471 | None:intergenic | 40.0% | |
| GATGATGTTGAAGTCCTTCA+TGG | + | chr3_2:63619454-63619473 | Msa0416720:CDS | 40.0% | |
| AGGTGAAGGAAATTCCTTCA+AGG | - | chr3_2:63619872-63619891 | None:intergenic | 40.0% | |
| ! | TTTGCTTCAAGGTACTCCTT+AGG | - | chr3_2:63619934-63619953 | None:intergenic | 40.0% |
| GGAAAATGAGGAATCACAGA+AGG | + | chr3_2:63619963-63619982 | Msa0416720:CDS | 40.0% | |
| CAAGCTTCTTCATCACCTAA+AGG | - | chr3_2:63619994-63620013 | None:intergenic | 40.0% | |
| CTTTAGGTGATGAAGAAGCT+TGG | + | chr3_2:63619992-63620011 | Msa0416720:CDS | 40.0% | |
| TTAGGTGATGAAGAAGCTTG+GGG | + | chr3_2:63619994-63620013 | Msa0416720:CDS | 40.0% | |
| AAAGAAGTCCCTAGTTTGAG+AGG | + | chr3_2:63620018-63620037 | Msa0416720:CDS | 40.0% | |
| CGGTACTATAGCTGATTACA+AGG | + | chr3_2:63620041-63620060 | Msa0416720:CDS | 40.0% | |
| CGATGAAGATGATCTTAAGG+AGG | + | chr3_2:63620172-63620191 | Msa0416720:CDS | 40.0% | |
| TGAAGATGATCTTAAGGAGG+AGG | + | chr3_2:63620175-63620194 | Msa0416720:CDS | 40.0% | |
| AGATTCCGATGAAGTGGAAA+AGG | + | chr3_2:63620199-63620218 | Msa0416720:CDS | 40.0% | |
| ! | CGCTTAATTGCTATTCATGC+TGG | + | chr3_2:63620251-63620270 | Msa0416720:CDS | 40.0% |
| CTTAGACGTCTCACTTTATC+AGG | - | chr3_2:63620317-63620336 | None:intergenic | 40.0% | |
| GAAAAGGCTGCTGAAACATA+TGG | + | chr3_2:63620356-63620375 | Msa0416720:CDS | 40.0% | |
| GTATCTGATCCAAGGAATCA+AGG | - | chr3_2:63620535-63620554 | None:intergenic | 40.0% | |
| AAAACTCGGTATCTGATCCA+AGG | - | chr3_2:63620543-63620562 | None:intergenic | 40.0% | |
| CAGTGTACTAAGAAGACAGT+CGG | - | chr3_2:63620612-63620631 | None:intergenic | 40.0% | |
| !! | CTTTGGAACAAACACATTGC+AGG | + | chr3_2:63620709-63620728 | Msa0416720:intron | 40.0% |
| TTGATCCTCTGATTGTTGAC+AGG | + | chr3_2:63620766-63620785 | Msa0416720:intron | 40.0% | |
| ATATTGCGAGTGTATCCGAA+AGG | + | chr3_2:63620804-63620823 | Msa0416720:CDS | 40.0% | |
| GATGGTTGCATTTAACATGC+AGG | + | chr3_2:63620884-63620903 | Msa0416720:CDS | 40.0% | |
| ! | GGCTACTGATTGAAAATTCG+AGG | + | chr3_2:63620969-63620988 | Msa0416720:intron | 40.0% |
| ! | TTTTGTCCTGACTTTCACTG+TGG | + | chr3_2:63621036-63621055 | Msa0416720:intron | 40.0% |
| ! | AGATCTCTTTGGTTGATGCA+AGG | + | chr3_2:63621208-63621227 | Msa0416720:CDS | 40.0% |
| ! | GGAATGTTTAAAGCCAATGG+AGG | + | chr3_2:63621229-63621248 | Msa0416720:CDS | 40.0% |
| ! | TTTAAAGCCAATGGAGGATG+CGG | + | chr3_2:63621235-63621254 | Msa0416720:CDS | 40.0% |
| GAAAACTGGTCCCTTTAATG+AGG | + | chr3_2:63621285-63621304 | Msa0416720:CDS | 40.0% | |
| TTCGATGGCAAATGAGCTTT+AGG | - | chr3_2:63621319-63621338 | None:intergenic | 40.0% | |
| GCCATCGAAAACTACTTTGA+AGG | + | chr3_2:63621330-63621349 | Msa0416720:CDS | 40.0% | |
| ! | CGAAAACTACTTTGAAGGTG+AGG | + | chr3_2:63621335-63621354 | Msa0416720:intron | 40.0% |
| GTGACTGTATATATGGGAGA+AGG | + | chr3_2:63621477-63621496 | Msa0416720:CDS | 40.0% | |
| CTGTATATATGGGAGAAGGA+TGG | + | chr3_2:63621481-63621500 | Msa0416720:CDS | 40.0% | |
| TCGAATACCTCATTCCAAGA+AGG | - | chr3_2:63622073-63622092 | None:intergenic | 40.0% | |
| TGAGTATGACATGTCTGAGA+AGG | + | chr3_2:63622141-63622160 | Msa0416720:CDS | 40.0% | |
| ATGTCTGAGAAGGATGACTT+TGG | + | chr3_2:63622151-63622170 | Msa0416720:CDS | 40.0% | |
| ATTCCATTACATTCCCGCAA+AGG | + | chr3_2:63622223-63622242 | Msa0416720:CDS | 40.0% | |
| GGTGTGAGAATAATTATCGG+TGG | + | chr3_2:63622430-63622449 | Msa0416720:intron | 40.0% | |
| CAGAAAGACATGTTTACCTC+TGG | - | chr3_2:63622632-63622651 | None:intergenic | 40.0% | |
| !! | GTTTGAGGCATCCCAATTTT+TGG | + | chr3_2:63622682-63622701 | Msa0416720:intron | 40.0% |
| !!! | GCATCCCAATTTTTGGTGTT+TGG | + | chr3_2:63622689-63622708 | Msa0416720:intron | 40.0% |
| !!! | GTTTTCAAGTATGCATGTGC+TGG | - | chr3_2:63622936-63622955 | None:intergenic | 40.0% |
| CCAGTACATTCCATCTAATC+TGG | - | chr3_2:63623223-63623242 | None:intergenic | 40.0% | |
| CCAGATTAGATGGAATGTAC+TGG | + | chr3_2:63623220-63623239 | Msa0416720:intron | 40.0% | |
| ! | GTCAACTTGGTAACTTAGGA+AGG | - | chr3_2:63623262-63623281 | None:intergenic | 40.0% |
| TCTTTGTTCGGGTGCATTAA+GGG | - | chr3_2:63623398-63623417 | None:intergenic | 40.0% | |
| TTCTTTGTTCGGGTGCATTA+AGG | - | chr3_2:63623399-63623418 | None:intergenic | 40.0% | |
| AAGGTGACGTTGTTTGATTG+CGG | - | chr3_2:63623489-63623508 | None:intergenic | 40.0% | |
| CATCAGCAACTGACACAAAT+TGG | + | chr3_2:63623775-63623794 | Msa0416720:intron | 40.0% | |
| !!! | CCGTCGTCTTTTTAATTTGG+TGG | - | chr3_2:63623805-63623824 | None:intergenic | 40.0% |
| AAGGAGGTCTATTGTGTCAT+AGG | - | chr3_2:63623830-63623849 | None:intergenic | 40.0% | |
| ! | ATGAGTTTGGAATGGGTAGT+TGG | - | chr3_2:63623922-63623941 | None:intergenic | 40.0% |
| ! | TGAAGGGATGAGTTTGGAAT+GGG | - | chr3_2:63623929-63623948 | None:intergenic | 40.0% |
| ATTAGGTGAAGGGATGAGTT+TGG | - | chr3_2:63623935-63623954 | None:intergenic | 40.0% | |
| GGGGTCAAATATGGTATAGA+GGG | - | chr3_2:63624016-63624035 | None:intergenic | 40.0% | |
| AGGGGTCAAATATGGTATAG+AGG | - | chr3_2:63624017-63624036 | None:intergenic | 40.0% | |
| ! | CTTTGTTTGGCAAATGGTGA+TGG | - | chr3_2:63624085-63624104 | None:intergenic | 40.0% |
| !! | ATACGGCTTTGTTTGGCAAA+TGG | - | chr3_2:63624091-63624110 | None:intergenic | 40.0% |
| !!! | TAAAGAAGCTGGTGGGTTTT+GGG | - | chr3_2:63624135-63624154 | None:intergenic | 40.0% |
| !!! | ATAAAGAAGCTGGTGGGTTT+TGG | - | chr3_2:63624136-63624155 | None:intergenic | 40.0% |
| GTTTGGATAAAGAAGCTGGT+GGG | - | chr3_2:63624142-63624161 | None:intergenic | 40.0% | |
| TGTTTGGATAAAGAAGCTGG+TGG | - | chr3_2:63624143-63624162 | None:intergenic | 40.0% | |
| !!! | GAATGTTTTTTCAAAGGGGG+TGG | - | chr3_2:63624209-63624228 | None:intergenic | 40.0% |
| CGTGTGAGTTCTGTGTTTAG+AGG | - | chr3_2:63617855-63617874 | None:intergenic | 45.0% | |
| ! | GTGTTCGTGTGATCGTGTTT+TGG | - | chr3_2:63617884-63617903 | None:intergenic | 45.0% |
| ACTAACTACCAATAAGCGCG+TGG | - | chr3_2:63617906-63617925 | None:intergenic | 45.0% | |
| GTTTAAACTCGGCGTATTGG+AGG | + | chr3_2:63618072-63618091 | Msa0416720:CDS | 45.0% | |
| TAAAGCTCCTTTATCTCCGG+CGG | - | chr3_2:63618100-63618119 | None:intergenic | 45.0% | |
| TACCATCGTTACTCCGATGA+AGG | + | chr3_2:63618118-63618137 | Msa0416720:CDS | 45.0% | |
| TGTCATAATCCCGCCTTCAT+CGG | - | chr3_2:63618134-63618153 | None:intergenic | 45.0% | |
| AAAAGGATTACCCCAGTGGA+AGG | - | chr3_2:63618331-63618350 | None:intergenic | 45.0% | |
| TTGACGTGTTTGGTTGCTCT+TGG | + | chr3_2:63618649-63618668 | Msa0416720:intron | 45.0% | |
| TGACGTGTTTGGTTGCTCTT+GGG | + | chr3_2:63618650-63618669 | Msa0416720:intron | 45.0% | |
| CGCAGATCCAAACATGCATT+TGG | + | chr3_2:63619159-63619178 | Msa0416720:intron | 45.0% | |
| !! | AAGCACTTCAGAGAGGTGTT+AGG | + | chr3_2:63619395-63619414 | Msa0416720:CDS | 45.0% |
| !! | AGCACTTCAGAGAGGTGTTA+GGG | + | chr3_2:63619396-63619415 | Msa0416720:CDS | 45.0% |
| CTTCGTTGCGTCAGAATATC+CGG | + | chr3_2:63619629-63619648 | Msa0416720:CDS | 45.0% | |
| AGGAGTAAGGTGGTCTTCTA+AGG | - | chr3_2:63619664-63619683 | None:intergenic | 45.0% | |
| GTAACTAACCTGAGCCACTT+TGG | - | chr3_2:63619697-63619716 | None:intergenic | 45.0% | |
| ! | AGTGGCTCAGGTTAGTTACT+TGG | + | chr3_2:63619698-63619717 | Msa0416720:intron | 45.0% |
| TCCTACCTCAGAAACCTTGA+AGG | + | chr3_2:63619855-63619874 | Msa0416720:CDS | 45.0% | |
| !! | TCCTTCAAGGTTTCTGAGGT+AGG | - | chr3_2:63619859-63619878 | None:intergenic | 45.0% |
| TCACAGAAGGGAAAGCCTTT+AGG | + | chr3_2:63619976-63619995 | Msa0416720:CDS | 45.0% | |
| TAGTACCGCCTCTCAAACTA+GGG | - | chr3_2:63620029-63620048 | None:intergenic | 45.0% | |
| ATAGTACCGCCTCTCAAACT+AGG | - | chr3_2:63620030-63620049 | None:intergenic | 45.0% | |
| ! | ACGTGCCTTTTCCACTTCAT+CGG | - | chr3_2:63620207-63620226 | None:intergenic | 45.0% |
| ATTCATGCTGGGAAGCCTAA+AGG | + | chr3_2:63620263-63620282 | Msa0416720:CDS | 45.0% | |
| CATTCCACTATTCCGCCTTT+AGG | - | chr3_2:63620281-63620300 | None:intergenic | 45.0% | |
| AAGTGAGTCACAGCTCGAAA+AGG | + | chr3_2:63620340-63620359 | Msa0416720:CDS | 45.0% | |
| GAATCAACAGCCAATGCAAC+AGG | - | chr3_2:63620464-63620483 | None:intergenic | 45.0% | |
| AGTCGGTGAAACCATTGTCA+AGG | - | chr3_2:63620595-63620614 | None:intergenic | 45.0% | |
| GTGAACCTGTCAACAATCAG+AGG | - | chr3_2:63620774-63620793 | None:intergenic | 45.0% | |
| GAGGTAATGCGTGTACCTTT+CGG | - | chr3_2:63620822-63620841 | None:intergenic | 45.0% | |
| CCATGCATCCACCCAATTAA+TGG | - | chr3_2:63620858-63620877 | None:intergenic | 45.0% | |
| CCATTAATTGGGTGGATGCA+TGG | + | chr3_2:63620855-63620874 | Msa0416720:CDS | 45.0% | |
| !! | TTTTGCTGTGGGTGGTTCTT+TGG | + | chr3_2:63621173-63621192 | Msa0416720:intron | 45.0% |
| TGGTTCTTTGGCAGGGTTAT+GGG | + | chr3_2:63621185-63621204 | Msa0416720:intron | 45.0% | |
| AGGGTTATGGGAGATCTCTT+TGG | + | chr3_2:63621197-63621216 | Msa0416720:intron | 45.0% | |
| AACAAAACCGCATCCTCCAT+TGG | - | chr3_2:63621245-63621264 | None:intergenic | 45.0% | |
| ACCTCCAGACTTCTATGCAA+GGG | + | chr3_2:63621542-63621561 | Msa0416720:CDS | 45.0% | |
| CATACCCTTGCATAGAAGTC+TGG | - | chr3_2:63621549-63621568 | None:intergenic | 45.0% | |
| ! | CTTATGCAGGTTGGAATTGC+TGG | + | chr3_2:63621992-63622011 | Msa0416720:intron | 45.0% |
| AGGATAGTTGGTTGCCTTCT+TGG | + | chr3_2:63622056-63622075 | Msa0416720:CDS | 45.0% | |
| TTGGTTGCCTTCTTGGAATG+AGG | + | chr3_2:63622063-63622082 | Msa0416720:CDS | 45.0% | |
| TCTGAGAAGGATGACTTTGG+TGG | + | chr3_2:63622154-63622173 | Msa0416720:CDS | 45.0% | |
| CCAAACATGCTTACCTGTGT+GGG | + | chr3_2:63622177-63622196 | Msa0416720:CDS | 45.0% | |
| TCTCCTTTGCGGGAATGTAA+TGG | - | chr3_2:63622229-63622248 | None:intergenic | 45.0% | |
| CCTACACTATTGAACGGTGT+GGG | - | chr3_2:63622570-63622589 | None:intergenic | 45.0% | |
| TCCTACACTATTGAACGGTG+TGG | - | chr3_2:63622571-63622590 | None:intergenic | 45.0% | |
| AAGGTTAAACTCCTTCCCAG+AGG | + | chr3_2:63622613-63622632 | Msa0416720:intron | 45.0% | |
| ! | AGACATGTTTACCTCTGGGA+AGG | - | chr3_2:63622627-63622646 | None:intergenic | 45.0% |
| ! | ATTGGGTTGCCTTGATCTCT+TGG | + | chr3_2:63622728-63622747 | Msa0416720:intron | 45.0% |
| GTTCGTTCTTCGGTAGTCTT+TGG | - | chr3_2:63623349-63623368 | None:intergenic | 45.0% | |
| CTTTGTTCGGGTGCATTAAG+GGG | - | chr3_2:63623397-63623416 | None:intergenic | 45.0% | |
| ! | TCAGCAAAGAGTACAACTCG+CGG | - | chr3_2:63623594-63623613 | None:intergenic | 45.0% |
| GGAATCAGTGGATGACACTT+GGG | - | chr3_2:63623632-63623651 | None:intergenic | 45.0% | |
| TGGAATCAGTGGATGACACT+TGG | - | chr3_2:63623633-63623652 | None:intergenic | 45.0% | |
| GTTACTAGATTGGGAGGAGT+AGG | - | chr3_2:63623703-63623722 | None:intergenic | 45.0% | |
| !! | AAGATACTTGGTCTTGGCGT+CGG | - | chr3_2:63623728-63623747 | None:intergenic | 45.0% |
| AAGGGGAAGATACTTGGTCT+TGG | - | chr3_2:63623734-63623753 | None:intergenic | 45.0% | |
| TGGGAAAAGGGGAAGATACT+TGG | - | chr3_2:63623740-63623759 | None:intergenic | 45.0% | |
| CAATAGACCTCCTTCAACCA+CGG | + | chr3_2:63623836-63623855 | Msa0416720:intron | 45.0% | |
| !!! | CGTTTTTTTGGTCAGTTCCG+TGG | - | chr3_2:63623856-63623875 | None:intergenic | 45.0% |
| GTGAAGGGATGAGTTTGGAA+TGG | - | chr3_2:63623930-63623949 | None:intergenic | 45.0% | |
| CATCCCTTCACCTAATTCTG+CGG | + | chr3_2:63623939-63623958 | Msa0416720:intron | 45.0% | |
| TGGTAGCTAGGGGTCAAATA+TGG | - | chr3_2:63624025-63624044 | None:intergenic | 45.0% | |
| GAATAGGTTGTGGTCTAAGG+TGG | - | chr3_2:63624045-63624064 | None:intergenic | 45.0% | |
| GCAGAATAGGTTGTGGTCTA+AGG | - | chr3_2:63624048-63624067 | None:intergenic | 45.0% | |
| !! | TGTTTGGCAAATGGTGATGG+AGG | - | chr3_2:63624082-63624101 | None:intergenic | 45.0% |
| !!! | TTTTTTCAAAGGGGGTGGTG+AGG | - | chr3_2:63624204-63624223 | None:intergenic | 45.0% |
| !! | AATTAAATTAAATTTGTAAA+TGG | + | chr3_2:63618497-63618516 | Msa0416720:intron | 5.0% |
| ! | ACAGCGTATGTTTCTGCTGC+CGG | + | chr3_2:63618044-63618063 | Msa0416720:CDS | 50.0% |
| CGGGTTTAAACTCGGCGTAT+TGG | + | chr3_2:63618069-63618088 | Msa0416720:CDS | 50.0% | |
| CATCGTTACTCCGATGAAGG+CGG | + | chr3_2:63618121-63618140 | Msa0416720:CDS | 50.0% | |
| ATCGTTACTCCGATGAAGGC+GGG | + | chr3_2:63618122-63618141 | Msa0416720:CDS | 50.0% | |
| CTCCTCTCTTACCTTCCACT+GGG | + | chr3_2:63618317-63618336 | Msa0416720:CDS | 50.0% | |
| TCCTCTCTTACCTTCCACTG+GGG | + | chr3_2:63618318-63618337 | Msa0416720:CDS | 50.0% | |
| CGGATATTCTGACGCAACGA+AGG | - | chr3_2:63619631-63619650 | None:intergenic | 50.0% | |
| CCTGAAGATCAGGAGTAAGG+TGG | - | chr3_2:63619674-63619693 | None:intergenic | 50.0% | |
| CCACCTTACTCCTGATCTTC+AGG | + | chr3_2:63619671-63619690 | Msa0416720:CDS | 50.0% | |
| TGGCCTGAAGATCAGGAGTA+AGG | - | chr3_2:63619677-63619696 | None:intergenic | 50.0% | |
| TCCTGATCTTCAGGCCAAAG+TGG | + | chr3_2:63619680-63619699 | Msa0416720:CDS | 50.0% | |
| CATATCAACCAAGCCGCCTA+AGG | + | chr3_2:63619915-63619934 | Msa0416720:CDS | 50.0% | |
| ! | GCTTCAAGGTACTCCTTAGG+CGG | - | chr3_2:63619931-63619950 | None:intergenic | 50.0% |
| GAAGTCCCTAGTTTGAGAGG+CGG | + | chr3_2:63620021-63620040 | Msa0416720:CDS | 50.0% | |
| GGAGGAAGATTCCGATGAAG+TGG | + | chr3_2:63620193-63620212 | Msa0416720:CDS | 50.0% | |
| GAAGCCTAAAGGCGGAATAG+TGG | + | chr3_2:63620274-63620293 | Msa0416720:CDS | 50.0% | |
| GAAACCTGTGAGGTCTAGCA+CGG | + | chr3_2:63620948-63620967 | Msa0416720:intron | 50.0% | |
| TCCTGACTTTCACTGTGGTG+AGG | + | chr3_2:63621041-63621060 | Msa0416720:intron | 50.0% | |
| TCCTCACCACAGTGAAAGTC+AGG | - | chr3_2:63621045-63621064 | None:intergenic | 50.0% | |
| GTGGTTCTTTGGCAGGGTTA+TGG | + | chr3_2:63621184-63621203 | Msa0416720:intron | 50.0% | |
| CACCTCCAGACTTCTATGCA+AGG | + | chr3_2:63621541-63621560 | Msa0416720:CDS | 50.0% | |
| ACCCTTGCATAGAAGTCTGG+AGG | - | chr3_2:63621546-63621565 | None:intergenic | 50.0% | |
| CGAATTCCCGCTTTCAGTTC+CGG | + | chr3_2:63622090-63622109 | Msa0416720:CDS | 50.0% | |
| GCCAAACATGCTTACCTGTG+TGG | + | chr3_2:63622176-63622195 | Msa0416720:CDS | 50.0% | |
| CCCACACAGGTAAGCATGTT+TGG | - | chr3_2:63622180-63622199 | None:intergenic | 50.0% | |
| CCACTTCTTAGTTCCCACAC+AGG | - | chr3_2:63622193-63622212 | None:intergenic | 50.0% | |
| CCTGTGTGGGAACTAAGAAG+TGG | + | chr3_2:63622190-63622209 | Msa0416720:CDS | 50.0% | |
| CCCACACCGTTCAATAGTGT+AGG | + | chr3_2:63622567-63622586 | Msa0416720:intron | 50.0% | |
| GGGTTTCAAAAAGGGTCCCA+CGG | + | chr3_2:63622660-63622679 | Msa0416720:intron | 50.0% | |
| AAAAAGGGTCCCACGGTTTG+AGG | + | chr3_2:63622667-63622686 | Msa0416720:intron | 50.0% | |
| ATTGGGATGCCTCAAACCGT+GGG | - | chr3_2:63622679-63622698 | None:intergenic | 50.0% | |
| AATTGGGATGCCTCAAACCG+TGG | - | chr3_2:63622680-63622699 | None:intergenic | 50.0% | |
| CTTCGGTAGTCTTTGGCACT+TGG | - | chr3_2:63623342-63623361 | None:intergenic | 50.0% | |
| ! | AGCAAAGAGTACAACTCGCG+GGG | - | chr3_2:63623592-63623611 | None:intergenic | 50.0% |
| ! | CAGCAAAGAGTACAACTCGC+GGG | - | chr3_2:63623593-63623612 | None:intergenic | 50.0% |
| GCGAGTTGTACTCTTTGCTG+AGG | + | chr3_2:63623593-63623612 | Msa0416720:intron | 50.0% | |
| GGAGTAGGAGGTGAGTGATT+TGG | - | chr3_2:63623688-63623707 | None:intergenic | 50.0% | |
| ACTAGATTGGGAGGAGTAGG+AGG | - | chr3_2:63623700-63623719 | None:intergenic | 50.0% | |
| TCGGAGGTTACTAGATTGGG+AGG | - | chr3_2:63623709-63623728 | None:intergenic | 50.0% | |
| GCGTCGGAGGTTACTAGATT+GGG | - | chr3_2:63623712-63623731 | None:intergenic | 50.0% | |
| GTGTCAGTTGCTGATGTGAG+TGG | - | chr3_2:63623771-63623790 | None:intergenic | 50.0% | |
| TTGGTCAGTTCCGTGGTTGA+AGG | - | chr3_2:63623849-63623868 | None:intergenic | 50.0% | |
| ! | GACAATTTTGTGAGGGTGGC+TGG | - | chr3_2:63623893-63623912 | None:intergenic | 50.0% |
| GGTCCGCAGAATTAGGTGAA+GGG | - | chr3_2:63623945-63623964 | None:intergenic | 50.0% | |
| AGGTCCGCAGAATTAGGTGA+AGG | - | chr3_2:63623946-63623965 | None:intergenic | 50.0% | |
| !! | GTATAGAGGGTGATGGAGTG+TGG | - | chr3_2:63624003-63624022 | None:intergenic | 50.0% |
| ! | TGGTCTAAGGTGGTAGCTAG+GGG | - | chr3_2:63624035-63624054 | None:intergenic | 50.0% |
| ! | GTGGTCTAAGGTGGTAGCTA+GGG | - | chr3_2:63624036-63624055 | None:intergenic | 50.0% |
| ! | TGTGGTCTAAGGTGGTAGCT+AGG | - | chr3_2:63624037-63624056 | None:intergenic | 50.0% |
| CACAACCTATTCTGCTCAGC+CGG | + | chr3_2:63624053-63624072 | Msa0416720:intron | 50.0% | |
| !! | CAAATGGTGATGGAGGATGC+CGG | - | chr3_2:63624075-63624094 | None:intergenic | 50.0% |
| CACGAACACCACGCGCTTAT+TGG | + | chr3_2:63617895-63617914 | Msa0416720:five_prime_UTR | 55.0% | |
| CGCCTTCATCGGAGTAACGA+TGG | - | chr3_2:63618123-63618142 | None:intergenic | 55.0% | |
| CCAGTGGAAGGTAAGAGAGG+AGG | - | chr3_2:63618319-63618338 | None:intergenic | 55.0% | |
| CCTCCTCTCTTACCTTCCAC+TGG | + | chr3_2:63618316-63618335 | Msa0416720:CDS | 55.0% | |
| ACCCCAGTGGAAGGTAAGAG+AGG | - | chr3_2:63618322-63618341 | None:intergenic | 55.0% | |
| CAGGACATTGACGACTCCTG+TGG | + | chr3_2:63619569-63619588 | Msa0416720:intron | 55.0% | |
| ! | GCCACTTTGGCCTGAAGATC+AGG | - | chr3_2:63619684-63619703 | None:intergenic | 55.0% |
| TCTTCAGGCCAAAGTGGCTC+AGG | + | chr3_2:63619686-63619705 | Msa0416720:CDS | 55.0% | |
| ! | AAGGTACTCCTTAGGCGGCT+TGG | - | chr3_2:63619926-63619945 | None:intergenic | 55.0% |
| CATGCTGGGAAGCCTAAAGG+CGG | + | chr3_2:63620266-63620285 | Msa0416720:CDS | 55.0% | |
| GTGGATGCATGGAGCTCAGA+TGG | + | chr3_2:63620866-63620885 | Msa0416720:CDS | 55.0% | |
| CTGTGGGTGGTTCTTTGGCA+GGG | + | chr3_2:63621178-63621197 | Msa0416720:intron | 55.0% | |
| GCATGAGGGAGTGGAATCAG+TGG | - | chr3_2:63623644-63623663 | None:intergenic | 55.0% | |
| ! | GGCGTCGGAGGTTACTAGAT+TGG | - | chr3_2:63623713-63623732 | None:intergenic | 55.0% |
| !! | ATACTTGGTCTTGGCGTCGG+AGG | - | chr3_2:63623725-63623744 | None:intergenic | 55.0% |
| GTCAGTTCCGTGGTTGAAGG+AGG | - | chr3_2:63623846-63623865 | None:intergenic | 55.0% | |
| TTGTGAGGGTGGCTGGAGAT+GGG | - | chr3_2:63623886-63623905 | None:intergenic | 55.0% | |
| TTTGTGAGGGTGGCTGGAGA+TGG | - | chr3_2:63623887-63623906 | None:intergenic | 55.0% | |
| GGAAGGAGGTCCGCAGAATT+AGG | - | chr3_2:63623952-63623971 | None:intergenic | 55.0% | |
| ! | GGGTTCTTCATGGTGGAAGG+AGG | - | chr3_2:63623966-63623985 | None:intergenic | 55.0% |
| ! | GTGATGGAGTGTGGAACGGA+GGG | - | chr3_2:63623994-63624013 | None:intergenic | 55.0% |
| !! | GAGGGTGATGGAGTGTGGAA+CGG | - | chr3_2:63623998-63624017 | None:intergenic | 55.0% |
| CGGCTGAGCAGAATAGGTTG+TGG | - | chr3_2:63624055-63624074 | None:intergenic | 55.0% | |
| !!! | GGTTTTGGGTGAGGAGGGTA+TGG | - | chr3_2:63624121-63624140 | None:intergenic | 55.0% |
| !!! | TGGTGGGTTTTGGGTGAGGA+GGG | - | chr3_2:63624126-63624145 | None:intergenic | 55.0% |
| !!! | AAGCTGGTGGGTTTTGGGTG+AGG | - | chr3_2:63624130-63624149 | None:intergenic | 55.0% |
| ! | GTATGTTTCTGCTGCCGGCG+CGG | + | chr3_2:63618049-63618068 | Msa0416720:CDS | 60.0% |
| ! | TATGTTTCTGCTGCCGGCGC+GGG | + | chr3_2:63618050-63618069 | Msa0416720:CDS | 60.0% |
| TGCCGGCGCGGGTTTAAACT+CGG | + | chr3_2:63618061-63618080 | Msa0416720:CDS | 60.0% | |
| GTAGCCGTGCTAGACCTCAC+AGG | - | chr3_2:63620955-63620974 | None:intergenic | 60.0% | |
| GCTGTGGGTGGTTCTTTGGC+AGG | + | chr3_2:63621177-63621196 | Msa0416720:intron | 60.0% | |
| CCAGCTCCGGAACTGAAAGC+GGG | - | chr3_2:63622099-63622118 | None:intergenic | 60.0% | |
| GCCAGCTCCGGAACTGAAAG+CGG | - | chr3_2:63622100-63622119 | None:intergenic | 60.0% | |
| ATGCGAAGCAGTGCCAGCTC+CGG | - | chr3_2:63622112-63622131 | None:intergenic | 60.0% | |
| ! | CGGGGGTTCTTCATGGTGGA+AGG | - | chr3_2:63623969-63623988 | None:intergenic | 60.0% |
| !! | GGTGATGGAGTGTGGAACGG+AGG | - | chr3_2:63623995-63624014 | None:intergenic | 60.0% |
| ! | GGATGCCGGCTGAGCAGAAT+AGG | - | chr3_2:63624061-63624080 | None:intergenic | 60.0% |
| !!! | CTGGTGGGTTTTGGGTGAGG+AGG | - | chr3_2:63624127-63624146 | None:intergenic | 60.0% |
| CGCCGAGTTTAAACCCGCGC+CGG | - | chr3_2:63618066-63618085 | None:intergenic | 65.0% | |
| !! | GGAGGCACCGCCGGAGATAA+AGG | + | chr3_2:63618090-63618109 | Msa0416720:CDS | 65.0% |
| CCCGCTTTCAGTTCCGGAGC+TGG | + | chr3_2:63622096-63622115 | Msa0416720:CDS | 65.0% | |
| !! | CGGCGTATTGGAGGCACCGC+CGG | + | chr3_2:63618081-63618100 | Msa0416720:CDS | 70.0% |
| GGCGCGGGGGTTCTTCATGG+TGG | - | chr3_2:63623973-63623992 | None:intergenic | 70.0% | |
| ! | GAGGGCGCGGGGGTTCTTCA+TGG | - | chr3_2:63623976-63623995 | None:intergenic | 70.0% |
| ! | AGTGTGGAACGGAGGGCGCG+GGG | - | chr3_2:63623987-63624006 | None:intergenic | 70.0% |
| ! | GAGTGTGGAACGGAGGGCGC+GGG | - | chr3_2:63623988-63624007 | None:intergenic | 70.0% |
| GGAGTGTGGAACGGAGGGCG+CGG | - | chr3_2:63623989-63624008 | None:intergenic | 70.0% | |
| ! | GTGTGGAACGGAGGGCGCGG+GGG | - | chr3_2:63623986-63624005 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 63617795 | 63624272 | 63617795 | ID=Msa0416720;Name=Msa0416720 |
| chr3_2 | mRNA | 63617795 | 63624272 | 63617795 | ID=Msa0416720-mRNA-1;Parent=Msa0416720;Name=Msa0416720-mRNA-1;_AED=0.17;_eAED=0.17;_QI=221|1|1|1|0.88|0.8|10|229|595 |
| chr3_2 | exon | 63617795 | 63618339 | 63617795 | ID=Msa0416720-mRNA-1:exon:13905;Parent=Msa0416720-mRNA-1 |
| chr3_2 | exon | 63619283 | 63619479 | 63619283 | ID=Msa0416720-mRNA-1:exon:13906;Parent=Msa0416720-mRNA-1 |
| chr3_2 | exon | 63619572 | 63619707 | 63619572 | ID=Msa0416720-mRNA-1:exon:13907;Parent=Msa0416720-mRNA-1 |
| chr3_2 | exon | 63619820 | 63620062 | 63619820 | ID=Msa0416720-mRNA-1:exon:13908;Parent=Msa0416720-mRNA-1 |
| chr3_2 | exon | 63620158 | 63620393 | 63620158 | ID=Msa0416720-mRNA-1:exon:13909;Parent=Msa0416720-mRNA-1 |
| chr3_2 | exon | 63620788 | 63620905 | 63620788 | ID=Msa0416720-mRNA-1:exon:13910;Parent=Msa0416720-mRNA-1 |
| chr3_2 | exon | 63621199 | 63621351 | 63621199 | ID=Msa0416720-mRNA-1:exon:13911;Parent=Msa0416720-mRNA-1 |
| chr3_2 | exon | 63621477 | 63621563 | 63621477 | ID=Msa0416720-mRNA-1:exon:13912;Parent=Msa0416720-mRNA-1 |
| chr3_2 | exon | 63622001 | 63622322 | 63622001 | ID=Msa0416720-mRNA-1:exon:13913;Parent=Msa0416720-mRNA-1 |
| chr3_2 | exon | 63624072 | 63624272 | 63624072 | ID=Msa0416720-mRNA-1:exon:13914;Parent=Msa0416720-mRNA-1 |
| chr3_2 | five_prime_UTR | 63617795 | 63618015 | 63617795 | ID=Msa0416720-mRNA-1:five_prime_utr;Parent=Msa0416720-mRNA-1 |
| chr3_2 | CDS | 63618016 | 63618339 | 63618016 | ID=Msa0416720-mRNA-1:cds;Parent=Msa0416720-mRNA-1 |
| chr3_2 | CDS | 63619283 | 63619479 | 63619283 | ID=Msa0416720-mRNA-1:cds;Parent=Msa0416720-mRNA-1 |
| chr3_2 | CDS | 63619572 | 63619707 | 63619572 | ID=Msa0416720-mRNA-1:cds;Parent=Msa0416720-mRNA-1 |
| chr3_2 | CDS | 63619820 | 63620062 | 63619820 | ID=Msa0416720-mRNA-1:cds;Parent=Msa0416720-mRNA-1 |
| chr3_2 | CDS | 63620158 | 63620393 | 63620158 | ID=Msa0416720-mRNA-1:cds;Parent=Msa0416720-mRNA-1 |
| chr3_2 | CDS | 63620788 | 63620905 | 63620788 | ID=Msa0416720-mRNA-1:cds;Parent=Msa0416720-mRNA-1 |
| chr3_2 | CDS | 63621199 | 63621351 | 63621199 | ID=Msa0416720-mRNA-1:cds;Parent=Msa0416720-mRNA-1 |
| chr3_2 | CDS | 63621477 | 63621563 | 63621477 | ID=Msa0416720-mRNA-1:cds;Parent=Msa0416720-mRNA-1 |
| chr3_2 | CDS | 63622001 | 63622294 | 63622001 | ID=Msa0416720-mRNA-1:cds;Parent=Msa0416720-mRNA-1 |
| chr3_2 | three_prime_UTR | 63622295 | 63622322 | 63622295 | ID=Msa0416720-mRNA-1:three_prime_utr;Parent=Msa0416720-mRNA-1 |
| chr3_2 | three_prime_UTR | 63624072 | 63624272 | 63624072 | ID=Msa0416720-mRNA-1:three_prime_utr;Parent=Msa0416720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
