Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0420710 | XP_003601481.2 | 87.006 | 354 | 34 | 4 | 1 | 346 | 1 | 350 | 0.0 | 560 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0420710 | G7J835 | 87.006 | 354 | 34 | 4 | 1 | 346 | 1 | 350 | 0.0 | 560 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0420710 | Msa0512470 | 0.819641 | 1.043670e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0420710 | MtrunA17_Chr3g0120481 | 87.006 | 354 | 34 | 4 | 1 | 346 | 1 | 350 | 0.0 | 560 |
Msa0420710 | MtrunA17_Chr2g0277261 | 36.986 | 73 | 43 | 2 | 70 | 142 | 400 | 469 | 4.68e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0420710 | AT5G03780.1 | 30.294 | 340 | 176 | 10 | 67 | 346 | 68 | 406 | 1.15e-28 | 116 |
Msa0420710 | AT4G12670.2 | 43.478 | 69 | 39 | 0 | 70 | 138 | 48 | 116 | 4.20e-15 | 77.4 |
Msa0420710 | AT4G12670.2 | 56.897 | 58 | 24 | 1 | 285 | 342 | 524 | 580 | 2.19e-12 | 68.9 |
Msa0420710 | AT1G01150.1 | 52.308 | 65 | 30 | 1 | 287 | 350 | 233 | 297 | 8.45e-13 | 69.3 |
Msa0420710 | AT1G01150.3 | 55.172 | 58 | 25 | 1 | 287 | 343 | 233 | 290 | 1.02e-12 | 68.6 |
Msa0420710 | AT4G12670.1 | 56.897 | 58 | 24 | 1 | 285 | 342 | 414 | 470 | 1.42e-12 | 69.3 |
Find 101 sgRNAs with CRISPR-Local
Find 580 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAATCAACGGGTACGGTTTC+GGG | 0.166113 | 3_2:+69433237 | None:intergenic |
GTGGATGAACCGAAAGTTTC+TGG | 0.188540 | 3_2:-69432886 | Msa0420710:CDS |
ATGACTTTGTACACAGTTAT+TGG | 0.211097 | 3_2:+69429435 | None:intergenic |
TTTCCAGAATCATCGAATTT+AGG | 0.217603 | 3_2:+69433105 | None:intergenic |
GAACCTAAATTCGATGATTC+TGG | 0.228693 | 3_2:-69433108 | Msa0420710:CDS |
GGAATCAACGGGTACGGTTT+CGG | 0.249956 | 3_2:+69433236 | None:intergenic |
CTTTCGTACTCTTGAAGTTC+TGG | 0.273691 | 3_2:+69432612 | None:intergenic |
CTGTTGATCTCAAGGATAAA+TGG | 0.309546 | 3_2:-69431142 | Msa0420710:CDS |
CCTTATCCTTATGCACTGTT+TGG | 0.310732 | 3_2:+69432974 | None:intergenic |
GTGGTGGAGAGGAGAGGAAT+TGG | 0.313590 | 3_2:+69433348 | None:intergenic |
AATGCAAATGTTATCCTCTA+AGG | 0.332745 | 3_2:+69433215 | None:intergenic |
GGTGGTAGTGGTGGTGGTGG+TGG | 0.337783 | 3_2:-69432664 | Msa0420710:CDS |
CATCCACTTCCGGTTCATTC+CGG | 0.337953 | 3_2:+69432902 | None:intergenic |
TCCTGAACCAGTTCCGGTTC+AGG | 0.339236 | 3_2:+69432934 | None:intergenic |
TACGGTTTCGGGAACGGAAT+CGG | 0.347727 | 3_2:+69433248 | None:intergenic |
GGAGGAAAGGTTTCTGTATC+AGG | 0.350343 | 3_2:-69432814 | Msa0420710:CDS |
TTCACCTCCGAGTTTGTTGC+AGG | 0.360798 | 3_2:+69433191 | None:intergenic |
CGTACCCGTTGATTCCTTAG+AGG | 0.363404 | 3_2:-69433229 | Msa0420710:CDS |
ACCTGAACCGGAACTGGTTC+AGG | 0.363541 | 3_2:-69432935 | Msa0420710:CDS |
ACTCCCCTGTTGGTCGTTAC+CGG | 0.375364 | 3_2:+69429564 | None:intergenic |
ACATGATCCTGAACCAGTTC+CGG | 0.376766 | 3_2:+69432928 | None:intergenic |
GCGCGTTTGTAAGCACAATA+AGG | 0.381410 | 3_2:+69433072 | None:intergenic |
ACGGTTTCGGGAACGGAATC+GGG | 0.382635 | 3_2:+69433249 | None:intergenic |
ACTGGTGGTGGTAGTGGTGG+TGG | 0.389224 | 3_2:-69432670 | Msa0420710:CDS |
CATTTATCCTTGAGATCAAC+AGG | 0.393896 | 3_2:+69431143 | None:intergenic |
GAGGAAAGTAGTAATGATAA+TGG | 0.397161 | 3_2:-69432856 | Msa0420710:CDS |
TCTTCAGAACCAGAAACTTT+CGG | 0.400056 | 3_2:+69432877 | None:intergenic |
CAAGTAGAACTTGTACTTAC+CGG | 0.405089 | 3_2:-69429583 | Msa0420710:CDS |
AACTAAAGATTCTGATTTCG+AGG | 0.416086 | 3_2:-69432776 | Msa0420710:CDS |
CGGAAAACTGGTGGTGGTAG+TGG | 0.416507 | 3_2:-69432676 | Msa0420710:CDS |
GTTTGAACCTGAACCGGAAC+TGG | 0.417441 | 3_2:-69432941 | Msa0420710:CDS |
CAGAAACGGGACAATCGGTT+TGG | 0.427621 | 3_2:+69433154 | None:intergenic |
TTGCTCAGGGAACGGAAAAC+TGG | 0.433257 | 3_2:-69432688 | Msa0420710:CDS |
ACTTTCGGTTCATCCACTTC+CGG | 0.435100 | 3_2:+69432892 | None:intergenic |
ACTTACCGGTAACGACCAAC+AGG | 0.441671 | 3_2:-69429569 | Msa0420710:CDS |
GGTGGTGGTAGTGGTGGTGG+TGG | 0.444320 | 3_2:-69432667 | Msa0420710:CDS |
AGAAACGGGACAATCGGTTT+GGG | 0.445530 | 3_2:+69433155 | None:intergenic |
GTGGACAGAAACGGGACAAT+CGG | 0.451848 | 3_2:+69433149 | None:intergenic |
TCTGTCCACGTCACTTGCAT+CGG | 0.455896 | 3_2:-69433135 | Msa0420710:CDS |
CAAGTGACGTGGACAGAAAC+GGG | 0.461251 | 3_2:+69433141 | None:intergenic |
GAAAACGTAAGAGATTGAAT+TGG | 0.465382 | 3_2:-69431819 | Msa0420710:CDS |
CAAACACCAAACAGTGCATA+AGG | 0.465899 | 3_2:-69432980 | Msa0420710:CDS |
AACGGGTACGGTTTCGGGAA+CGG | 0.467703 | 3_2:+69433242 | None:intergenic |
AGAATCATCGAATTTAGGTT+CGG | 0.471132 | 3_2:+69433110 | None:intergenic |
GCAAGTGACGTGGACAGAAA+CGG | 0.480126 | 3_2:+69433140 | None:intergenic |
TCATGTAAACCGGAATGAAC+CGG | 0.485033 | 3_2:-69432911 | Msa0420710:CDS |
AGAATAAAATCCGTCGTCAC+CGG | 0.489382 | 3_2:-69433408 | Msa0420710:CDS |
TTATCCTCTAAGGAATCAAC+GGG | 0.490208 | 3_2:+69433225 | None:intergenic |
GCAACCGTTTGAACCTGAAC+CGG | 0.491105 | 3_2:-69432947 | Msa0420710:CDS |
CCAAACAGTGCATAAGGATA+AGG | 0.492268 | 3_2:-69432974 | Msa0420710:CDS |
AAACCGGAATGAACCGGAAG+TGG | 0.502517 | 3_2:-69432905 | Msa0420710:CDS |
GGCTGCATTGTGGTCGTCGT+TGG | 0.520462 | 3_2:+69433326 | None:intergenic |
TGGTTCAGGATCATGTAAAC+CGG | 0.529209 | 3_2:-69432921 | Msa0420710:CDS |
GTTTCTGTGGCGGAGAAGAA+AGG | 0.529575 | 3_2:-69432754 | Msa0420710:CDS |
TGCATTACCTGCAACAAACT+CGG | 0.529643 | 3_2:-69433198 | Msa0420710:CDS |
TCGGGAACGGAATCGGGAAG+TGG | 0.533711 | 3_2:+69433255 | None:intergenic |
GTTATCCTCTAAGGAATCAA+CGG | 0.537345 | 3_2:+69433224 | None:intergenic |
GAGAGGAATTGGAGAGGCGG+CGG | 0.541460 | 3_2:+69433359 | None:intergenic |
TGCATTGTGGTCGTCGTTGG+TGG | 0.547328 | 3_2:+69433329 | None:intergenic |
TTCTGATTTCGAGGTTTCTG+TGG | 0.547418 | 3_2:-69432767 | Msa0420710:CDS |
CTCTAAGGAATCAACGGGTA+CGG | 0.549071 | 3_2:+69433230 | None:intergenic |
AGTTCCGGTTCAGGTTCAAA+CGG | 0.555953 | 3_2:+69432943 | None:intergenic |
GGAAATGATGAAGATGAAGA+TGG | 0.556012 | 3_2:-69432835 | Msa0420710:CDS |
AGCAGCCTTACGTTTAACAT+TGG | 0.557451 | 3_2:+69432726 | None:intergenic |
TCGTGCCAATGTTAAACGTA+AGG | 0.561986 | 3_2:-69432731 | Msa0420710:CDS |
CAGAAGATCAGAATATCCCT+TGG | 0.568204 | 3_2:-69431214 | Msa0420710:CDS |
TCGCACTCCTGTTGATCTCA+AGG | 0.568231 | 3_2:-69431150 | Msa0420710:CDS |
ATTGTGGTCGTCGTTGGTGG+TGG | 0.568451 | 3_2:+69433332 | None:intergenic |
CGGGAAGTGGAGTGTGAGTG+TGG | 0.569480 | 3_2:+69433268 | None:intergenic |
TGAAGATGAAGATGGAGGAA+AGG | 0.572241 | 3_2:-69432827 | Msa0420710:CDS |
GGAATTGGAGAGGCGGCGGA+AGG | 0.573812 | 3_2:+69433363 | None:intergenic |
AAGATCAGAATATCCCTTGG+AGG | 0.574002 | 3_2:-69431211 | Msa0420710:CDS |
GAAAGTTTCTGGTTCTGAAG+AGG | 0.574074 | 3_2:-69432875 | Msa0420710:CDS |
TGTAATCAAAACTCCCCTGT+TGG | 0.575285 | 3_2:+69429554 | None:intergenic |
GTCGCTGTTGCTGTTGTAGA+CGG | 0.577461 | 3_2:+69433305 | None:intergenic |
AATGGAGGAGCATTACCTCC+AGG | 0.577985 | 3_2:-69431124 | Msa0420710:intron |
AAAACTGGTGGTGGTAGTGG+TGG | 0.580026 | 3_2:-69432673 | Msa0420710:CDS |
TATACTACGGCGGCGAACAC+CGG | 0.582649 | 3_2:+69433389 | None:intergenic |
GGAGAGGAGAGGAATTGGAG+AGG | 0.584895 | 3_2:+69433353 | None:intergenic |
TGATTTCGAGGTTTCTGTGG+CGG | 0.600498 | 3_2:-69432764 | Msa0420710:CDS |
AGGGAACGGAAAACTGGTGG+TGG | 0.612464 | 3_2:-69432682 | Msa0420710:CDS |
CGGCGGAAGGTGTTATACTA+CGG | 0.614400 | 3_2:+69433376 | None:intergenic |
GCGGCGAACACCGGTGACGA+CGG | 0.614754 | 3_2:+69433398 | None:intergenic |
GTCTACAACAGCAACAGCGA+CGG | 0.620104 | 3_2:-69433303 | Msa0420710:CDS |
TGGTGGTGGTGACGTAGACG+AGG | 0.624663 | 3_2:-69432650 | Msa0420710:CDS |
TGTTGTAGACGGCTGCATTG+TGG | 0.624933 | 3_2:+69433316 | None:intergenic |
GAGGAGAGGAATTGGAGAGG+CGG | 0.626329 | 3_2:+69433356 | None:intergenic |
ACGAAGCAGAATATGCTGAC+TGG | 0.626474 | 3_2:-69431841 | Msa0420710:CDS |
TACAACAGCAACAGCGACGG+CGG | 0.627964 | 3_2:-69433300 | Msa0420710:CDS |
CTCAGGGAACGGAAAACTGG+TGG | 0.642678 | 3_2:-69432685 | Msa0420710:CDS |
TCGTTGGTGGTGGAGAGGAG+AGG | 0.652897 | 3_2:+69433342 | None:intergenic |
CGGAACCGATGCAAGTGACG+TGG | 0.655615 | 3_2:+69433130 | None:intergenic |
GGTCGTCGTTGGTGGTGGAG+AGG | 0.664183 | 3_2:+69433337 | None:intergenic |
GAAGTGGAGTGTGAGTGTGG+TGG | 0.671974 | 3_2:+69433271 | None:intergenic |
AATGATGAAGATGAAGATGG+AGG | 0.676726 | 3_2:-69432832 | Msa0420710:CDS |
TTGATCTCAAGGATAAATGG+AGG | 0.683743 | 3_2:-69431139 | Msa0420710:CDS |
TGGTGGTGACGTAGACGAGG+AGG | 0.689122 | 3_2:-69432647 | Msa0420710:CDS |
CTTACCGGTAACGACCAACA+GGG | 0.694515 | 3_2:-69429568 | Msa0420710:CDS |
CGGAAGGTGTTATACTACGG+CGG | 0.713230 | 3_2:+69433379 | None:intergenic |
TTACCGGTAACGACCAACAG+GGG | 0.715608 | 3_2:-69429567 | Msa0420710:CDS |
ATTACCTGCAACAAACTCGG+AGG | 0.764721 | 3_2:-69433195 | Msa0420710:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATAATAATTGAATTTCT+AGG | - | chr3_2:69431729-69431748 | Msa0420710:intron | 10.0% |
!! | TTTATAATAATTGAATTTCT+AGG | - | chr3_2:69431729-69431748 | Msa0420710:intron | 10.0% |
!! | AAAACAGATATAATCAATTA+TGG | - | chr3_2:69431289-69431308 | Msa0420710:intron | 15.0% |
!! | AAACAGATATAATCAATTAT+GGG | - | chr3_2:69431290-69431309 | Msa0420710:intron | 15.0% |
!! | ATAATATAGAATCATCAAAA+AGG | + | chr3_2:69432239-69432258 | None:intergenic | 15.0% |
!!! | TTTTTGATGATTCTATATTA+TGG | - | chr3_2:69432238-69432257 | Msa0420710:intron | 15.0% |
!!! | TCACTATCAATTTTTTTATA+GGG | + | chr3_2:69432939-69432958 | None:intergenic | 15.0% |
!! | AAAACAGATATAATCAATTA+TGG | - | chr3_2:69431289-69431308 | Msa0420710:intron | 15.0% |
!! | AAACAGATATAATCAATTAT+GGG | - | chr3_2:69431290-69431309 | Msa0420710:intron | 15.0% |
!! | ATAATATAGAATCATCAAAA+AGG | + | chr3_2:69432239-69432258 | None:intergenic | 15.0% |
!!! | TTTTTGATGATTCTATATTA+TGG | - | chr3_2:69432238-69432257 | Msa0420710:intron | 15.0% |
!!! | TCACTATCAATTTTTTTATA+GGG | + | chr3_2:69432939-69432958 | None:intergenic | 15.0% |
!!! | ATTTTTCAATTAAAGCTACA+AGG | - | chr3_2:69430551-69430570 | Msa0420710:intron | 20.0% |
!!! | TTTTTCAATTAAAGCTACAA+GGG | - | chr3_2:69430552-69430571 | Msa0420710:intron | 20.0% |
!!! | TCTTTTATGATAGAACATTA+TGG | - | chr3_2:69431144-69431163 | Msa0420710:CDS | 20.0% |
!!! | TATAAATATCGATTATAGCT+CGG | + | chr3_2:69431715-69431734 | None:intergenic | 20.0% |
!!! | CATAAGAAAGAATTCTTTTT+GGG | - | chr3_2:69431851-69431870 | Msa0420710:intron | 20.0% |
!!! | ATAAGAAAGAATTCTTTTTG+GGG | - | chr3_2:69431852-69431871 | Msa0420710:intron | 20.0% |
!!! | TACATATTTAAAGTATGACA+AGG | - | chr3_2:69432083-69432102 | Msa0420710:intron | 20.0% |
!!! | AATCACTTTTCTAATTTCTT+TGG | - | chr3_2:69432187-69432206 | Msa0420710:intron | 20.0% |
!! | ATGCAAATGAATTCTTTATT+CGG | + | chr3_2:69432729-69432748 | None:intergenic | 20.0% |
!!! | GTCACTATCAATTTTTTTAT+AGG | + | chr3_2:69432940-69432959 | None:intergenic | 20.0% |
!! | AATACTAATAACAGTTTAAG+TGG | + | chr3_2:69432998-69433017 | None:intergenic | 20.0% |
!! | ATACTAACTTCTATTATTTC+AGG | + | chr3_2:69433074-69433093 | None:intergenic | 20.0% |
!!! | ATTTTTCAATTAAAGCTACA+AGG | - | chr3_2:69430551-69430570 | Msa0420710:intron | 20.0% |
!!! | TTTTTCAATTAAAGCTACAA+GGG | - | chr3_2:69430552-69430571 | Msa0420710:intron | 20.0% |
!!! | TCTTTTATGATAGAACATTA+TGG | - | chr3_2:69431144-69431163 | Msa0420710:CDS | 20.0% |
!!! | TATAAATATCGATTATAGCT+CGG | + | chr3_2:69431715-69431734 | None:intergenic | 20.0% |
!!! | CATAAGAAAGAATTCTTTTT+GGG | - | chr3_2:69431851-69431870 | Msa0420710:intron | 20.0% |
!!! | ATAAGAAAGAATTCTTTTTG+GGG | - | chr3_2:69431852-69431871 | Msa0420710:intron | 20.0% |
!!! | TACATATTTAAAGTATGACA+AGG | - | chr3_2:69432083-69432102 | Msa0420710:intron | 20.0% |
!!! | AATCACTTTTCTAATTTCTT+TGG | - | chr3_2:69432187-69432206 | Msa0420710:intron | 20.0% |
!! | ATGCAAATGAATTCTTTATT+CGG | + | chr3_2:69432729-69432748 | None:intergenic | 20.0% |
!!! | GTCACTATCAATTTTTTTAT+AGG | + | chr3_2:69432940-69432959 | None:intergenic | 20.0% |
!! | AATACTAATAACAGTTTAAG+TGG | + | chr3_2:69432998-69433017 | None:intergenic | 20.0% |
!! | ATACTAACTTCTATTATTTC+AGG | + | chr3_2:69433074-69433093 | None:intergenic | 20.0% |
! | TACTACTACTACTACTTAAT+TGG | + | chr3_2:69430317-69430336 | None:intergenic | 25.0% |
! | TTGATTAAAAAAGACACGTT+TGG | + | chr3_2:69430689-69430708 | None:intergenic | 25.0% |
! | ATGTTCTATCATAAAAGAGA+TGG | + | chr3_2:69431142-69431161 | None:intergenic | 25.0% |
! | AGAAACTTAAAATGTTTACC+AGG | + | chr3_2:69431241-69431260 | None:intergenic | 25.0% |
!!! | GTCTTAGCTTTATTTTCTAT+AGG | - | chr3_2:69431345-69431364 | Msa0420710:intron | 25.0% |
!! | ATTTTCTATAGGCAAATTCT+TGG | - | chr3_2:69431356-69431375 | Msa0420710:intron | 25.0% |
! | TTAGTTATTATTACTGCTCA+AGG | - | chr3_2:69431494-69431513 | Msa0420710:intron | 25.0% |
!!! | ATTCTAAAATTTTCCTCCAA+GGG | + | chr3_2:69431605-69431624 | None:intergenic | 25.0% |
!!! | AATTCTAAAATTTTCCTCCA+AGG | + | chr3_2:69431606-69431625 | None:intergenic | 25.0% |
!!! | TGGAGGAAAATTTTAGAATT+CGG | - | chr3_2:69431606-69431625 | Msa0420710:intron | 25.0% |
!!! | TAGCTTTATTGCAAATTTCA+TGG | - | chr3_2:69431819-69431838 | Msa0420710:CDS | 25.0% |
!! | GCATAAGAAAGAATTCTTTT+TGG | - | chr3_2:69431850-69431869 | Msa0420710:intron | 25.0% |
!! | TAAGAAAGAATTCTTTTTGG+GGG | - | chr3_2:69431853-69431872 | Msa0420710:intron | 25.0% |
!! | TAATGCATCTGAAATAAAGT+TGG | + | chr3_2:69431913-69431932 | None:intergenic | 25.0% |
!!! | AAGTGATTATTTTACAATGC+AGG | + | chr3_2:69432175-69432194 | None:intergenic | 25.0% |
!!! | TTCTTTGGAACAATCATTTT+AGG | - | chr3_2:69432202-69432221 | Msa0420710:intron | 25.0% |
!! | AATCATTTTGTGCATTTTGT+TGG | - | chr3_2:69432305-69432324 | Msa0420710:intron | 25.0% |
!!! | AACTTGTTTTGACATTTGTT+TGG | - | chr3_2:69432357-69432376 | Msa0420710:intron | 25.0% |
!!! | ACTTGTTTTGACATTTGTTT+GGG | - | chr3_2:69432358-69432377 | Msa0420710:intron | 25.0% |
!!! | AAAAAATTGATAGTGACTGA+AGG | - | chr3_2:69432943-69432962 | Msa0420710:CDS | 25.0% |
! | TTTCAGACAATAAAGATGAA+AGG | + | chr3_2:69432972-69432991 | None:intergenic | 25.0% |
! | GAGTGTCATAAAAAGAAAAA+AGG | + | chr3_2:69433035-69433054 | None:intergenic | 25.0% |
! | ATGCATGTTTCAACTAATAT+TGG | - | chr3_2:69433104-69433123 | Msa0420710:CDS | 25.0% |
! | ACTCAATAAAAAACATGACT+AGG | + | chr3_2:69433322-69433341 | None:intergenic | 25.0% |
! | TGTACGAAGAATTGTAAAAA+TGG | - | chr3_2:69433411-69433430 | Msa0420710:CDS | 25.0% |
! | GTACGAAGAATTGTAAAAAT+GGG | - | chr3_2:69433412-69433431 | Msa0420710:CDS | 25.0% |
! | TACTACTACTACTACTTAAT+TGG | + | chr3_2:69430317-69430336 | None:intergenic | 25.0% |
! | TTGATTAAAAAAGACACGTT+TGG | + | chr3_2:69430689-69430708 | None:intergenic | 25.0% |
! | ATGTTCTATCATAAAAGAGA+TGG | + | chr3_2:69431142-69431161 | None:intergenic | 25.0% |
! | AGAAACTTAAAATGTTTACC+AGG | + | chr3_2:69431241-69431260 | None:intergenic | 25.0% |
!!! | GTCTTAGCTTTATTTTCTAT+AGG | - | chr3_2:69431345-69431364 | Msa0420710:intron | 25.0% |
!! | ATTTTCTATAGGCAAATTCT+TGG | - | chr3_2:69431356-69431375 | Msa0420710:intron | 25.0% |
! | TTAGTTATTATTACTGCTCA+AGG | - | chr3_2:69431494-69431513 | Msa0420710:intron | 25.0% |
!!! | ATTCTAAAATTTTCCTCCAA+GGG | + | chr3_2:69431605-69431624 | None:intergenic | 25.0% |
!!! | AATTCTAAAATTTTCCTCCA+AGG | + | chr3_2:69431606-69431625 | None:intergenic | 25.0% |
!!! | TGGAGGAAAATTTTAGAATT+CGG | - | chr3_2:69431606-69431625 | Msa0420710:intron | 25.0% |
!!! | TAGCTTTATTGCAAATTTCA+TGG | - | chr3_2:69431819-69431838 | Msa0420710:CDS | 25.0% |
!! | GCATAAGAAAGAATTCTTTT+TGG | - | chr3_2:69431850-69431869 | Msa0420710:intron | 25.0% |
!! | TAAGAAAGAATTCTTTTTGG+GGG | - | chr3_2:69431853-69431872 | Msa0420710:intron | 25.0% |
!! | TAATGCATCTGAAATAAAGT+TGG | + | chr3_2:69431913-69431932 | None:intergenic | 25.0% |
!!! | AAGTGATTATTTTACAATGC+AGG | + | chr3_2:69432175-69432194 | None:intergenic | 25.0% |
!!! | TTCTTTGGAACAATCATTTT+AGG | - | chr3_2:69432202-69432221 | Msa0420710:intron | 25.0% |
!! | AATCATTTTGTGCATTTTGT+TGG | - | chr3_2:69432305-69432324 | Msa0420710:intron | 25.0% |
!!! | AACTTGTTTTGACATTTGTT+TGG | - | chr3_2:69432357-69432376 | Msa0420710:intron | 25.0% |
!!! | ACTTGTTTTGACATTTGTTT+GGG | - | chr3_2:69432358-69432377 | Msa0420710:intron | 25.0% |
!!! | AAAAAATTGATAGTGACTGA+AGG | - | chr3_2:69432943-69432962 | Msa0420710:CDS | 25.0% |
! | TTTCAGACAATAAAGATGAA+AGG | + | chr3_2:69432972-69432991 | None:intergenic | 25.0% |
! | GAGTGTCATAAAAAGAAAAA+AGG | + | chr3_2:69433035-69433054 | None:intergenic | 25.0% |
! | ATGCATGTTTCAACTAATAT+TGG | - | chr3_2:69433104-69433123 | Msa0420710:CDS | 25.0% |
! | ACTCAATAAAAAACATGACT+AGG | + | chr3_2:69433322-69433341 | None:intergenic | 25.0% |
! | TGTACGAAGAATTGTAAAAA+TGG | - | chr3_2:69433411-69433430 | Msa0420710:CDS | 25.0% |
! | GTACGAAGAATTGTAAAAAT+GGG | - | chr3_2:69433412-69433431 | Msa0420710:CDS | 25.0% |
! | GATTTTATTCTCATCGATCA+CGG | + | chr3_2:69429383-69429402 | None:intergenic | 30.0% |
AATGCAAATGTTATCCTCTA+AGG | + | chr3_2:69429588-69429607 | None:intergenic | 30.0% | |
! | AGAATCATCGAATTTAGGTT+CGG | + | chr3_2:69429693-69429712 | None:intergenic | 30.0% |
TTTCCAGAATCATCGAATTT+AGG | + | chr3_2:69429698-69429717 | None:intergenic | 30.0% | |
GAGGAAAGTAGTAATGATAA+TGG | - | chr3_2:69429944-69429963 | Msa0420710:intron | 30.0% | |
AACTAAAGATTCTGATTTCG+AGG | - | chr3_2:69430024-69430043 | Msa0420710:intron | 30.0% | |
TTTCACATTCATTGAACTTC+AGG | + | chr3_2:69430235-69430254 | None:intergenic | 30.0% | |
! | TTTGATAAGCTAGCTTATAG+TGG | - | chr3_2:69430418-69430437 | Msa0420710:intron | 30.0% |
! | TTAGTGTTTGATAGCATTAG+TGG | - | chr3_2:69430468-69430487 | Msa0420710:intron | 30.0% |
AAGCTATAAGCTCAAATATG+TGG | - | chr3_2:69430733-69430752 | Msa0420710:intron | 30.0% | |
ATCGAATATAACCACATTTG+GGG | + | chr3_2:69430772-69430791 | None:intergenic | 30.0% | |
GATCGAATATAACCACATTT+GGG | + | chr3_2:69430773-69430792 | None:intergenic | 30.0% | |
TGATCGAATATAACCACATT+TGG | + | chr3_2:69430774-69430793 | None:intergenic | 30.0% | |
CAAAACACTGACAGAAAAAA+CGG | + | chr3_2:69430852-69430871 | None:intergenic | 30.0% | |
!! | GAATAGAGCTGATATTTTGA+TGG | - | chr3_2:69430874-69430893 | Msa0420710:intron | 30.0% |
! | GATTTGTCTTTAGGTATTGT+TGG | - | chr3_2:69430903-69430922 | Msa0420710:intron | 30.0% |
GAAAACGTAAGAGATTGAAT+TGG | - | chr3_2:69430981-69431000 | Msa0420710:intron | 30.0% | |
TGAAGAAGAAAAAGTTCTCA+AGG | - | chr3_2:69431009-69431028 | Msa0420710:intron | 30.0% | |
ATTAGAGCGTGATATCAATA+AGG | + | chr3_2:69431049-69431068 | None:intergenic | 30.0% | |
CAAAATCAAGTCAGAAGTAA+AGG | + | chr3_2:69431078-69431097 | None:intergenic | 30.0% | |
!! | CTTTACTTCTGACTTGATTT+TGG | - | chr3_2:69431076-69431095 | Msa0420710:intron | 30.0% |
TAGAACATTATGGCGTAATT+TGG | - | chr3_2:69431154-69431173 | Msa0420710:CDS | 30.0% | |
!!! | ACTTATGTTTTTTGCATTGC+AGG | - | chr3_2:69431542-69431561 | Msa0420710:intron | 30.0% |
AAAAGGGTAATGAAATATCG+AGG | + | chr3_2:69431974-69431993 | None:intergenic | 30.0% | |
TGTAAAGCAAACATCATATC+AGG | + | chr3_2:69432117-69432136 | None:intergenic | 30.0% | |
AAATTAACTCCGAAAGAGTA+AGG | - | chr3_2:69432141-69432160 | Msa0420710:intron | 30.0% | |
GAAAAAATGCCTTACTCTTT+CGG | + | chr3_2:69432153-69432172 | None:intergenic | 30.0% | |
!!! | CTTGTTTTGACATTTGTTTG+GGG | - | chr3_2:69432359-69432378 | Msa0420710:intron | 30.0% |
!! | TAAAAGTTGGTTTGGTAGTT+GGG | - | chr3_2:69432508-69432527 | Msa0420710:intron | 30.0% |
AGTTCAACTCATGTTTCAAA+TGG | - | chr3_2:69432780-69432799 | Msa0420710:CDS | 30.0% | |
GTTCAACTCATGTTTCAAAT+GGG | - | chr3_2:69432781-69432800 | Msa0420710:CDS | 30.0% | |
TCATCTAAATCGCAATCTTA+TGG | + | chr3_2:69433141-69433160 | None:intergenic | 30.0% | |
GATTACATTACAGCAAAAAG+TGG | - | chr3_2:69433262-69433281 | Msa0420710:CDS | 30.0% | |
ATGACTTTGTACACAGTTAT+TGG | + | chr3_2:69433368-69433387 | None:intergenic | 30.0% | |
! | GATTTTATTCTCATCGATCA+CGG | + | chr3_2:69429383-69429402 | None:intergenic | 30.0% |
AATGCAAATGTTATCCTCTA+AGG | + | chr3_2:69429588-69429607 | None:intergenic | 30.0% | |
! | AGAATCATCGAATTTAGGTT+CGG | + | chr3_2:69429693-69429712 | None:intergenic | 30.0% |
TTTCCAGAATCATCGAATTT+AGG | + | chr3_2:69429698-69429717 | None:intergenic | 30.0% | |
GAGGAAAGTAGTAATGATAA+TGG | - | chr3_2:69429944-69429963 | Msa0420710:intron | 30.0% | |
AACTAAAGATTCTGATTTCG+AGG | - | chr3_2:69430024-69430043 | Msa0420710:intron | 30.0% | |
TTTCACATTCATTGAACTTC+AGG | + | chr3_2:69430235-69430254 | None:intergenic | 30.0% | |
! | TTTGATAAGCTAGCTTATAG+TGG | - | chr3_2:69430418-69430437 | Msa0420710:intron | 30.0% |
! | TTAGTGTTTGATAGCATTAG+TGG | - | chr3_2:69430468-69430487 | Msa0420710:intron | 30.0% |
AAGCTATAAGCTCAAATATG+TGG | - | chr3_2:69430733-69430752 | Msa0420710:intron | 30.0% | |
ATCGAATATAACCACATTTG+GGG | + | chr3_2:69430772-69430791 | None:intergenic | 30.0% | |
GATCGAATATAACCACATTT+GGG | + | chr3_2:69430773-69430792 | None:intergenic | 30.0% | |
TGATCGAATATAACCACATT+TGG | + | chr3_2:69430774-69430793 | None:intergenic | 30.0% | |
CAAAACACTGACAGAAAAAA+CGG | + | chr3_2:69430852-69430871 | None:intergenic | 30.0% | |
!! | GAATAGAGCTGATATTTTGA+TGG | - | chr3_2:69430874-69430893 | Msa0420710:intron | 30.0% |
! | GATTTGTCTTTAGGTATTGT+TGG | - | chr3_2:69430903-69430922 | Msa0420710:intron | 30.0% |
GAAAACGTAAGAGATTGAAT+TGG | - | chr3_2:69430981-69431000 | Msa0420710:intron | 30.0% | |
TGAAGAAGAAAAAGTTCTCA+AGG | - | chr3_2:69431009-69431028 | Msa0420710:intron | 30.0% | |
ATTAGAGCGTGATATCAATA+AGG | + | chr3_2:69431049-69431068 | None:intergenic | 30.0% | |
CAAAATCAAGTCAGAAGTAA+AGG | + | chr3_2:69431078-69431097 | None:intergenic | 30.0% | |
!! | CTTTACTTCTGACTTGATTT+TGG | - | chr3_2:69431076-69431095 | Msa0420710:intron | 30.0% |
TAGAACATTATGGCGTAATT+TGG | - | chr3_2:69431154-69431173 | Msa0420710:CDS | 30.0% | |
!!! | ACTTATGTTTTTTGCATTGC+AGG | - | chr3_2:69431542-69431561 | Msa0420710:intron | 30.0% |
AAAAGGGTAATGAAATATCG+AGG | + | chr3_2:69431974-69431993 | None:intergenic | 30.0% | |
TGTAAAGCAAACATCATATC+AGG | + | chr3_2:69432117-69432136 | None:intergenic | 30.0% | |
AAATTAACTCCGAAAGAGTA+AGG | - | chr3_2:69432141-69432160 | Msa0420710:intron | 30.0% | |
GAAAAAATGCCTTACTCTTT+CGG | + | chr3_2:69432153-69432172 | None:intergenic | 30.0% | |
!!! | CTTGTTTTGACATTTGTTTG+GGG | - | chr3_2:69432359-69432378 | Msa0420710:intron | 30.0% |
!! | TAAAAGTTGGTTTGGTAGTT+GGG | - | chr3_2:69432508-69432527 | Msa0420710:intron | 30.0% |
AGTTCAACTCATGTTTCAAA+TGG | - | chr3_2:69432780-69432799 | Msa0420710:CDS | 30.0% | |
GTTCAACTCATGTTTCAAAT+GGG | - | chr3_2:69432781-69432800 | Msa0420710:CDS | 30.0% | |
TCATCTAAATCGCAATCTTA+TGG | + | chr3_2:69433141-69433160 | None:intergenic | 30.0% | |
GATTACATTACAGCAAAAAG+TGG | - | chr3_2:69433262-69433281 | Msa0420710:CDS | 30.0% | |
ATGACTTTGTACACAGTTAT+TGG | + | chr3_2:69433368-69433387 | None:intergenic | 30.0% | |
! | TTATCCTCTAAGGAATCAAC+GGG | + | chr3_2:69429578-69429597 | None:intergenic | 35.0% |
! | GTTATCCTCTAAGGAATCAA+CGG | + | chr3_2:69429579-69429598 | None:intergenic | 35.0% |
GAACCTAAATTCGATGATTC+TGG | - | chr3_2:69429692-69429711 | Msa0420710:intron | 35.0% | |
TCTTCAGAACCAGAAACTTT+CGG | + | chr3_2:69429926-69429945 | None:intergenic | 35.0% | |
GGAAATGATGAAGATGAAGA+TGG | - | chr3_2:69429965-69429984 | Msa0420710:intron | 35.0% | |
AATGATGAAGATGAAGATGG+AGG | - | chr3_2:69429968-69429987 | Msa0420710:intron | 35.0% | |
!! | TGTGAAAAAAGCATTGCTCA+GGG | - | chr3_2:69430099-69430118 | Msa0420710:intron | 35.0% |
! | TTTAGATTGAAGGCGTGATA+AGG | - | chr3_2:69430368-69430387 | Msa0420710:intron | 35.0% |
!! | TGGAGAGTTGATTTGTCTTT+AGG | - | chr3_2:69430894-69430913 | Msa0420710:intron | 35.0% |
!! | ACTTCTGACTTGATTTTGGA+TGG | - | chr3_2:69431080-69431099 | Msa0420710:intron | 35.0% |
!! | ATGGCTTACTGGTTTAATCA+CGG | - | chr3_2:69431099-69431118 | Msa0420710:intron | 35.0% |
TTCTATAGGCAAATTCTTGG+CGG | - | chr3_2:69431359-69431378 | Msa0420710:intron | 35.0% | |
!! | TTCTTGGCGGTTAATTTGTT+AGG | - | chr3_2:69431372-69431391 | Msa0420710:intron | 35.0% |
!! | TCTTGGCGGTTAATTTGTTA+GGG | - | chr3_2:69431373-69431392 | Msa0420710:intron | 35.0% |
!!! | ATGTTTTTTGCATTGCAGGA+AGG | - | chr3_2:69431546-69431565 | Msa0420710:intron | 35.0% |
CATTTATCCTTGAGATCAAC+AGG | + | chr3_2:69431660-69431679 | None:intergenic | 35.0% | |
CTGTTGATCTCAAGGATAAA+TGG | - | chr3_2:69431658-69431677 | Msa0420710:intron | 35.0% | |
TTGATCTCAAGGATAAATGG+AGG | - | chr3_2:69431661-69431680 | Msa0420710:intron | 35.0% | |
CTATATTGTATTGTATGCCC+TGG | - | chr3_2:69431774-69431793 | Msa0420710:intron | 35.0% | |
CAAAAAACCCAAAGTTTCCA+GGG | + | chr3_2:69431794-69431813 | None:intergenic | 35.0% | |
! | TTTTGTGCATTTTGTTGGAG+AGG | - | chr3_2:69432310-69432329 | Msa0420710:intron | 35.0% |
!! | TTGTTTGGGGATTTGTTATG+AGG | - | chr3_2:69432372-69432391 | Msa0420710:intron | 35.0% |
ATACAAGACCATTGGTAAAG+AGG | - | chr3_2:69432418-69432437 | Msa0420710:intron | 35.0% | |
GGCTGTATGATATGAAGAAT+AGG | - | chr3_2:69432439-69432458 | Msa0420710:intron | 35.0% | |
TGAAGAATAGGATGAGAAAC+TGG | - | chr3_2:69432451-69432470 | Msa0420710:intron | 35.0% | |
GAAGAATAGGATGAGAAACT+GGG | - | chr3_2:69432452-69432471 | Msa0420710:intron | 35.0% | |
AAGAATAGGATGAGAAACTG+GGG | - | chr3_2:69432453-69432472 | Msa0420710:intron | 35.0% | |
!! | CCAACTTTTAGAAGATGCAA+GGG | + | chr3_2:69432498-69432517 | None:intergenic | 35.0% |
!! | ACCAACTTTTAGAAGATGCA+AGG | + | chr3_2:69432499-69432518 | None:intergenic | 35.0% |
! | GCATCTTCTAAAAGTTGGTT+TGG | - | chr3_2:69432500-69432519 | Msa0420710:intron | 35.0% |
!! | CTAAAAGTTGGTTTGGTAGT+TGG | - | chr3_2:69432507-69432526 | Msa0420710:intron | 35.0% |
TAGTTGGGAGAAATAGTTGT+AGG | - | chr3_2:69432523-69432542 | Msa0420710:intron | 35.0% | |
TATAACAGTTAGGACTTAGG+AGG | - | chr3_2:69432563-69432582 | Msa0420710:intron | 35.0% | |
ATAACAGTTAGGACTTAGGA+GGG | - | chr3_2:69432564-69432583 | Msa0420710:intron | 35.0% | |
! | CAGCTCTCTAATTTTCCATT+CGG | - | chr3_2:69432665-69432684 | Msa0420710:CDS | 35.0% |
GCTCAATATGAGAAAGAGAA+GGG | + | chr3_2:69432701-69432720 | None:intergenic | 35.0% | |
TGCTCAATATGAGAAAGAGA+AGG | + | chr3_2:69432702-69432721 | None:intergenic | 35.0% | |
TTTGCATATGTACCAGTTGA+AGG | - | chr3_2:69432742-69432761 | Msa0420710:CDS | 35.0% | |
AACAGAATTTAGCTAGGGAA+TGG | + | chr3_2:69432914-69432933 | None:intergenic | 35.0% | |
GGGATAACAGAATTTAGCTA+GGG | + | chr3_2:69432919-69432938 | None:intergenic | 35.0% | |
AGGGATAACAGAATTTAGCT+AGG | + | chr3_2:69432920-69432939 | None:intergenic | 35.0% | |
ATTTCAGGCAATGTAACTGA+GGG | + | chr3_2:69433059-69433078 | None:intergenic | 35.0% | |
TATTTCAGGCAATGTAACTG+AGG | + | chr3_2:69433060-69433079 | None:intergenic | 35.0% | |
! | ATAACTGTTTTGCTACACAC+AGG | - | chr3_2:69433191-69433210 | Msa0420710:CDS | 35.0% |
CAAGTAGAACTTGTACTTAC+CGG | - | chr3_2:69433217-69433236 | Msa0420710:CDS | 35.0% | |
TACATTACAGCAAAAAGTGG+AGG | - | chr3_2:69433265-69433284 | Msa0420710:CDS | 35.0% | |
! | TTATCCTCTAAGGAATCAAC+GGG | + | chr3_2:69429578-69429597 | None:intergenic | 35.0% |
! | GTTATCCTCTAAGGAATCAA+CGG | + | chr3_2:69429579-69429598 | None:intergenic | 35.0% |
GAACCTAAATTCGATGATTC+TGG | - | chr3_2:69429692-69429711 | Msa0420710:intron | 35.0% | |
TCTTCAGAACCAGAAACTTT+CGG | + | chr3_2:69429926-69429945 | None:intergenic | 35.0% | |
GGAAATGATGAAGATGAAGA+TGG | - | chr3_2:69429965-69429984 | Msa0420710:intron | 35.0% | |
AATGATGAAGATGAAGATGG+AGG | - | chr3_2:69429968-69429987 | Msa0420710:intron | 35.0% | |
!! | TGTGAAAAAAGCATTGCTCA+GGG | - | chr3_2:69430099-69430118 | Msa0420710:intron | 35.0% |
! | TTTAGATTGAAGGCGTGATA+AGG | - | chr3_2:69430368-69430387 | Msa0420710:intron | 35.0% |
!! | TGGAGAGTTGATTTGTCTTT+AGG | - | chr3_2:69430894-69430913 | Msa0420710:intron | 35.0% |
!! | ACTTCTGACTTGATTTTGGA+TGG | - | chr3_2:69431080-69431099 | Msa0420710:intron | 35.0% |
!! | ATGGCTTACTGGTTTAATCA+CGG | - | chr3_2:69431099-69431118 | Msa0420710:intron | 35.0% |
TTCTATAGGCAAATTCTTGG+CGG | - | chr3_2:69431359-69431378 | Msa0420710:intron | 35.0% | |
!! | TTCTTGGCGGTTAATTTGTT+AGG | - | chr3_2:69431372-69431391 | Msa0420710:intron | 35.0% |
!! | TCTTGGCGGTTAATTTGTTA+GGG | - | chr3_2:69431373-69431392 | Msa0420710:intron | 35.0% |
!!! | ATGTTTTTTGCATTGCAGGA+AGG | - | chr3_2:69431546-69431565 | Msa0420710:intron | 35.0% |
CATTTATCCTTGAGATCAAC+AGG | + | chr3_2:69431660-69431679 | None:intergenic | 35.0% | |
CTGTTGATCTCAAGGATAAA+TGG | - | chr3_2:69431658-69431677 | Msa0420710:intron | 35.0% | |
TTGATCTCAAGGATAAATGG+AGG | - | chr3_2:69431661-69431680 | Msa0420710:intron | 35.0% | |
CTATATTGTATTGTATGCCC+TGG | - | chr3_2:69431774-69431793 | Msa0420710:intron | 35.0% | |
CAAAAAACCCAAAGTTTCCA+GGG | + | chr3_2:69431794-69431813 | None:intergenic | 35.0% | |
! | TTTTGTGCATTTTGTTGGAG+AGG | - | chr3_2:69432310-69432329 | Msa0420710:intron | 35.0% |
!! | TTGTTTGGGGATTTGTTATG+AGG | - | chr3_2:69432372-69432391 | Msa0420710:intron | 35.0% |
ATACAAGACCATTGGTAAAG+AGG | - | chr3_2:69432418-69432437 | Msa0420710:intron | 35.0% | |
GGCTGTATGATATGAAGAAT+AGG | - | chr3_2:69432439-69432458 | Msa0420710:intron | 35.0% | |
TGAAGAATAGGATGAGAAAC+TGG | - | chr3_2:69432451-69432470 | Msa0420710:intron | 35.0% | |
GAAGAATAGGATGAGAAACT+GGG | - | chr3_2:69432452-69432471 | Msa0420710:intron | 35.0% | |
AAGAATAGGATGAGAAACTG+GGG | - | chr3_2:69432453-69432472 | Msa0420710:intron | 35.0% | |
!! | CCAACTTTTAGAAGATGCAA+GGG | + | chr3_2:69432498-69432517 | None:intergenic | 35.0% |
!! | ACCAACTTTTAGAAGATGCA+AGG | + | chr3_2:69432499-69432518 | None:intergenic | 35.0% |
! | GCATCTTCTAAAAGTTGGTT+TGG | - | chr3_2:69432500-69432519 | Msa0420710:intron | 35.0% |
!! | CTAAAAGTTGGTTTGGTAGT+TGG | - | chr3_2:69432507-69432526 | Msa0420710:intron | 35.0% |
TAGTTGGGAGAAATAGTTGT+AGG | - | chr3_2:69432523-69432542 | Msa0420710:intron | 35.0% | |
TATAACAGTTAGGACTTAGG+AGG | - | chr3_2:69432563-69432582 | Msa0420710:intron | 35.0% | |
ATAACAGTTAGGACTTAGGA+GGG | - | chr3_2:69432564-69432583 | Msa0420710:intron | 35.0% | |
! | CAGCTCTCTAATTTTCCATT+CGG | - | chr3_2:69432665-69432684 | Msa0420710:CDS | 35.0% |
GCTCAATATGAGAAAGAGAA+GGG | + | chr3_2:69432701-69432720 | None:intergenic | 35.0% | |
TGCTCAATATGAGAAAGAGA+AGG | + | chr3_2:69432702-69432721 | None:intergenic | 35.0% | |
TTTGCATATGTACCAGTTGA+AGG | - | chr3_2:69432742-69432761 | Msa0420710:CDS | 35.0% | |
AACAGAATTTAGCTAGGGAA+TGG | + | chr3_2:69432914-69432933 | None:intergenic | 35.0% | |
GGGATAACAGAATTTAGCTA+GGG | + | chr3_2:69432919-69432938 | None:intergenic | 35.0% | |
AGGGATAACAGAATTTAGCT+AGG | + | chr3_2:69432920-69432939 | None:intergenic | 35.0% | |
ATTTCAGGCAATGTAACTGA+GGG | + | chr3_2:69433059-69433078 | None:intergenic | 35.0% | |
TATTTCAGGCAATGTAACTG+AGG | + | chr3_2:69433060-69433079 | None:intergenic | 35.0% | |
! | ATAACTGTTTTGCTACACAC+AGG | - | chr3_2:69433191-69433210 | Msa0420710:CDS | 35.0% |
CAAGTAGAACTTGTACTTAC+CGG | - | chr3_2:69433217-69433236 | Msa0420710:CDS | 35.0% | |
TACATTACAGCAAAAAGTGG+AGG | - | chr3_2:69433265-69433284 | Msa0420710:CDS | 35.0% | |
AGAATAAAATCCGTCGTCAC+CGG | - | chr3_2:69429392-69429411 | Msa0420710:three_prime_UTR | 40.0% | |
TGCATTACCTGCAACAAACT+CGG | - | chr3_2:69429602-69429621 | Msa0420710:intron | 40.0% | |
CAAACACCAAACAGTGCATA+AGG | - | chr3_2:69429820-69429839 | Msa0420710:intron | 40.0% | |
CCTTATCCTTATGCACTGTT+TGG | + | chr3_2:69429829-69429848 | None:intergenic | 40.0% | |
CCAAACAGTGCATAAGGATA+AGG | - | chr3_2:69429826-69429845 | Msa0420710:intron | 40.0% | |
TGGTTCAGGATCATGTAAAC+CGG | - | chr3_2:69429879-69429898 | Msa0420710:intron | 40.0% | |
TCATGTAAACCGGAATGAAC+CGG | - | chr3_2:69429889-69429908 | Msa0420710:intron | 40.0% | |
!! | GAAAGTTTCTGGTTCTGAAG+AGG | - | chr3_2:69429925-69429944 | Msa0420710:intron | 40.0% |
TGAAGATGAAGATGGAGGAA+AGG | - | chr3_2:69429973-69429992 | Msa0420710:intron | 40.0% | |
TTCTGATTTCGAGGTTTCTG+TGG | - | chr3_2:69430033-69430052 | Msa0420710:intron | 40.0% | |
TCGTGCCAATGTTAAACGTA+AGG | - | chr3_2:69430069-69430088 | Msa0420710:intron | 40.0% | |
AGCAGCCTTACGTTTAACAT+TGG | + | chr3_2:69430077-69430096 | None:intergenic | 40.0% | |
!!! | CTGAGCAATGCTTTTTTCAC+AGG | + | chr3_2:69430100-69430119 | None:intergenic | 40.0% |
!! | CTGTGAAAAAAGCATTGCTC+AGG | - | chr3_2:69430098-69430117 | Msa0420710:intron | 40.0% |
!! | AAAAAGCATTGCTCAGGGAA+CGG | - | chr3_2:69430104-69430123 | Msa0420710:intron | 40.0% |
CTTTCGTACTCTTGAAGTTC+TGG | + | chr3_2:69430191-69430210 | None:intergenic | 40.0% | |
! | GCACTGACACTTTAGATTGA+AGG | - | chr3_2:69430358-69430377 | Msa0420710:intron | 40.0% |
! | CTTGATTTTGGATGGCTTAC+TGG | - | chr3_2:69431088-69431107 | Msa0420710:intron | 40.0% |
GTTGTTAGTTCACAACTTCC+TGG | - | chr3_2:69431220-69431239 | Msa0420710:CDS | 40.0% | |
GGGATGCTTACATTTGATCA+AGG | - | chr3_2:69431310-69431329 | Msa0420710:intron | 40.0% | |
!! | CTTGGCGGTTAATTTGTTAG+GGG | - | chr3_2:69431374-69431393 | Msa0420710:intron | 40.0% |
!! | TTGGCGGTTAATTTGTTAGG+GGG | - | chr3_2:69431375-69431394 | Msa0420710:intron | 40.0% |
! | AGTTTGGGACACAAAAAGAG+TGG | + | chr3_2:69431445-69431464 | None:intergenic | 40.0% |
ATGCTCAGTGGTATGAGTTT+GGG | + | chr3_2:69431460-69431479 | None:intergenic | 40.0% | |
CAGAAGATCAGAATATCCCT+TGG | - | chr3_2:69431586-69431605 | Msa0420710:intron | 40.0% | |
AAGATCAGAATATCCCTTGG+AGG | - | chr3_2:69431589-69431608 | Msa0420710:intron | 40.0% | |
ATTGTATGCCCTGGAAACTT+TGG | - | chr3_2:69431783-69431802 | Msa0420710:intron | 40.0% | |
TTGTATGCCCTGGAAACTTT+GGG | - | chr3_2:69431784-69431803 | Msa0420710:intron | 40.0% | |
GCAAAAAACCCAAAGTTTCC+AGG | + | chr3_2:69431795-69431814 | None:intergenic | 40.0% | |
GGGTAATGAAATATCGAGGT+AGG | + | chr3_2:69431970-69431989 | None:intergenic | 40.0% | |
ATGTGCATACGAGAGCAAAA+GGG | + | chr3_2:69431990-69432009 | None:intergenic | 40.0% | |
TATGTGCATACGAGAGCAAA+AGG | + | chr3_2:69431991-69432010 | None:intergenic | 40.0% | |
! | CAATACCCTATGAAAGTGTG+TGG | + | chr3_2:69432021-69432040 | None:intergenic | 40.0% |
AAACATCATATCAGGCTAGC+GGG | + | chr3_2:69432109-69432128 | None:intergenic | 40.0% | |
CAAACATCATATCAGGCTAG+CGG | + | chr3_2:69432110-69432129 | None:intergenic | 40.0% | |
GCTTCTTGATACAAGACCAT+TGG | - | chr3_2:69432410-69432429 | Msa0420710:intron | 40.0% | |
TCATACAGCCTCTTTACCAA+TGG | + | chr3_2:69432429-69432448 | None:intergenic | 40.0% | |
! | CCCTTGCATCTTCTAAAAGT+TGG | - | chr3_2:69432495-69432514 | Msa0420710:intron | 40.0% |
GACTGAACGGTATAACAGTT+AGG | - | chr3_2:69432553-69432572 | Msa0420710:intron | 40.0% | |
CGGTATAACAGTTAGGACTT+AGG | - | chr3_2:69432560-69432579 | Msa0420710:intron | 40.0% | |
TAACAGTTAGGACTTAGGAG+GGG | - | chr3_2:69432565-69432584 | Msa0420710:intron | 40.0% | |
ATAAGAGAGGGCTAGAGAAA+TGG | - | chr3_2:69432597-69432616 | Msa0420710:intron | 40.0% | |
AAAAACTGGTGGAGAGAAAG+TGG | - | chr3_2:69432630-69432649 | Msa0420710:CDS | 40.0% | |
AAAACTGGTGGAGAGAAAGT+GGG | - | chr3_2:69432631-69432650 | Msa0420710:CDS | 40.0% | |
TGAGAAAGAGAAGGGTGAAA+AGG | + | chr3_2:69432693-69432712 | None:intergenic | 40.0% | |
GTAAGAATGATGCCTTCAAC+TGG | + | chr3_2:69432757-69432776 | None:intergenic | 40.0% | |
CAGAGACAGACAAATACAGT+TGG | + | chr3_2:69432887-69432906 | None:intergenic | 40.0% | |
AGAATTTAGCTAGGGAATGG+AGG | + | chr3_2:69432911-69432930 | None:intergenic | 40.0% | |
TGTAATCAAAACTCCCCTGT+TGG | + | chr3_2:69433249-69433268 | None:intergenic | 40.0% | |
TTACAGCAAAAAGTGGAGGA+AGG | - | chr3_2:69433269-69433288 | Msa0420710:CDS | 40.0% | |
AGAATAAAATCCGTCGTCAC+CGG | - | chr3_2:69429392-69429411 | Msa0420710:three_prime_UTR | 40.0% | |
TGCATTACCTGCAACAAACT+CGG | - | chr3_2:69429602-69429621 | Msa0420710:intron | 40.0% | |
CAAACACCAAACAGTGCATA+AGG | - | chr3_2:69429820-69429839 | Msa0420710:intron | 40.0% | |
CCTTATCCTTATGCACTGTT+TGG | + | chr3_2:69429829-69429848 | None:intergenic | 40.0% | |
CCAAACAGTGCATAAGGATA+AGG | - | chr3_2:69429826-69429845 | Msa0420710:intron | 40.0% | |
TGGTTCAGGATCATGTAAAC+CGG | - | chr3_2:69429879-69429898 | Msa0420710:intron | 40.0% | |
TCATGTAAACCGGAATGAAC+CGG | - | chr3_2:69429889-69429908 | Msa0420710:intron | 40.0% | |
!! | GAAAGTTTCTGGTTCTGAAG+AGG | - | chr3_2:69429925-69429944 | Msa0420710:intron | 40.0% |
TGAAGATGAAGATGGAGGAA+AGG | - | chr3_2:69429973-69429992 | Msa0420710:intron | 40.0% | |
TTCTGATTTCGAGGTTTCTG+TGG | - | chr3_2:69430033-69430052 | Msa0420710:intron | 40.0% | |
TCGTGCCAATGTTAAACGTA+AGG | - | chr3_2:69430069-69430088 | Msa0420710:intron | 40.0% | |
AGCAGCCTTACGTTTAACAT+TGG | + | chr3_2:69430077-69430096 | None:intergenic | 40.0% | |
!!! | CTGAGCAATGCTTTTTTCAC+AGG | + | chr3_2:69430100-69430119 | None:intergenic | 40.0% |
!! | CTGTGAAAAAAGCATTGCTC+AGG | - | chr3_2:69430098-69430117 | Msa0420710:intron | 40.0% |
!! | AAAAAGCATTGCTCAGGGAA+CGG | - | chr3_2:69430104-69430123 | Msa0420710:intron | 40.0% |
CTTTCGTACTCTTGAAGTTC+TGG | + | chr3_2:69430191-69430210 | None:intergenic | 40.0% | |
! | GCACTGACACTTTAGATTGA+AGG | - | chr3_2:69430358-69430377 | Msa0420710:intron | 40.0% |
! | CTTGATTTTGGATGGCTTAC+TGG | - | chr3_2:69431088-69431107 | Msa0420710:intron | 40.0% |
GTTGTTAGTTCACAACTTCC+TGG | - | chr3_2:69431220-69431239 | Msa0420710:CDS | 40.0% | |
GGGATGCTTACATTTGATCA+AGG | - | chr3_2:69431310-69431329 | Msa0420710:intron | 40.0% | |
!! | CTTGGCGGTTAATTTGTTAG+GGG | - | chr3_2:69431374-69431393 | Msa0420710:intron | 40.0% |
!! | TTGGCGGTTAATTTGTTAGG+GGG | - | chr3_2:69431375-69431394 | Msa0420710:intron | 40.0% |
! | AGTTTGGGACACAAAAAGAG+TGG | + | chr3_2:69431445-69431464 | None:intergenic | 40.0% |
ATGCTCAGTGGTATGAGTTT+GGG | + | chr3_2:69431460-69431479 | None:intergenic | 40.0% | |
CAGAAGATCAGAATATCCCT+TGG | - | chr3_2:69431586-69431605 | Msa0420710:intron | 40.0% | |
AAGATCAGAATATCCCTTGG+AGG | - | chr3_2:69431589-69431608 | Msa0420710:intron | 40.0% | |
ATTGTATGCCCTGGAAACTT+TGG | - | chr3_2:69431783-69431802 | Msa0420710:intron | 40.0% | |
TTGTATGCCCTGGAAACTTT+GGG | - | chr3_2:69431784-69431803 | Msa0420710:intron | 40.0% | |
GCAAAAAACCCAAAGTTTCC+AGG | + | chr3_2:69431795-69431814 | None:intergenic | 40.0% | |
GGGTAATGAAATATCGAGGT+AGG | + | chr3_2:69431970-69431989 | None:intergenic | 40.0% | |
ATGTGCATACGAGAGCAAAA+GGG | + | chr3_2:69431990-69432009 | None:intergenic | 40.0% | |
TATGTGCATACGAGAGCAAA+AGG | + | chr3_2:69431991-69432010 | None:intergenic | 40.0% | |
! | CAATACCCTATGAAAGTGTG+TGG | + | chr3_2:69432021-69432040 | None:intergenic | 40.0% |
AAACATCATATCAGGCTAGC+GGG | + | chr3_2:69432109-69432128 | None:intergenic | 40.0% | |
CAAACATCATATCAGGCTAG+CGG | + | chr3_2:69432110-69432129 | None:intergenic | 40.0% | |
GCTTCTTGATACAAGACCAT+TGG | - | chr3_2:69432410-69432429 | Msa0420710:intron | 40.0% | |
TCATACAGCCTCTTTACCAA+TGG | + | chr3_2:69432429-69432448 | None:intergenic | 40.0% | |
! | CCCTTGCATCTTCTAAAAGT+TGG | - | chr3_2:69432495-69432514 | Msa0420710:intron | 40.0% |
GACTGAACGGTATAACAGTT+AGG | - | chr3_2:69432553-69432572 | Msa0420710:intron | 40.0% | |
CGGTATAACAGTTAGGACTT+AGG | - | chr3_2:69432560-69432579 | Msa0420710:intron | 40.0% | |
TAACAGTTAGGACTTAGGAG+GGG | - | chr3_2:69432565-69432584 | Msa0420710:intron | 40.0% | |
ATAAGAGAGGGCTAGAGAAA+TGG | - | chr3_2:69432597-69432616 | Msa0420710:intron | 40.0% | |
AAAAACTGGTGGAGAGAAAG+TGG | - | chr3_2:69432630-69432649 | Msa0420710:CDS | 40.0% | |
AAAACTGGTGGAGAGAAAGT+GGG | - | chr3_2:69432631-69432650 | Msa0420710:CDS | 40.0% | |
TGAGAAAGAGAAGGGTGAAA+AGG | + | chr3_2:69432693-69432712 | None:intergenic | 40.0% | |
GTAAGAATGATGCCTTCAAC+TGG | + | chr3_2:69432757-69432776 | None:intergenic | 40.0% | |
CAGAGACAGACAAATACAGT+TGG | + | chr3_2:69432887-69432906 | None:intergenic | 40.0% | |
AGAATTTAGCTAGGGAATGG+AGG | + | chr3_2:69432911-69432930 | None:intergenic | 40.0% | |
TGTAATCAAAACTCCCCTGT+TGG | + | chr3_2:69433249-69433268 | None:intergenic | 40.0% | |
TTACAGCAAAAAGTGGAGGA+AGG | - | chr3_2:69433269-69433288 | Msa0420710:CDS | 40.0% | |
!!! | CGGTTCTGTGCTTTTTCAGA+GGG | + | chr3_2:69429363-69429382 | None:intergenic | 45.0% |
!!! | ACGGTTCTGTGCTTTTTCAG+AGG | + | chr3_2:69429364-69429383 | None:intergenic | 45.0% |
! | CTCTAAGGAATCAACGGGTA+CGG | + | chr3_2:69429573-69429592 | None:intergenic | 45.0% |
ATTACCTGCAACAAACTCGG+AGG | - | chr3_2:69429605-69429624 | Msa0420710:intron | 45.0% | |
! | AGAAACGGGACAATCGGTTT+GGG | + | chr3_2:69429648-69429667 | None:intergenic | 45.0% |
GCGCGTTTGTAAGCACAATA+AGG | + | chr3_2:69429731-69429750 | None:intergenic | 45.0% | |
! | AGTTCCGGTTCAGGTTCAAA+CGG | + | chr3_2:69429860-69429879 | None:intergenic | 45.0% |
ACATGATCCTGAACCAGTTC+CGG | + | chr3_2:69429875-69429894 | None:intergenic | 45.0% | |
ACTTTCGGTTCATCCACTTC+CGG | + | chr3_2:69429911-69429930 | None:intergenic | 45.0% | |
GTGGATGAACCGAAAGTTTC+TGG | - | chr3_2:69429914-69429933 | Msa0420710:intron | 45.0% | |
GGAGGAAAGGTTTCTGTATC+AGG | - | chr3_2:69429986-69430005 | Msa0420710:intron | 45.0% | |
TGATTTCGAGGTTTCTGTGG+CGG | - | chr3_2:69430036-69430055 | Msa0420710:intron | 45.0% | |
TACCAAACAGACCCCAAATG+TGG | - | chr3_2:69430758-69430777 | Msa0420710:intron | 45.0% | |
! | AACCACATTTGGGGTCTGTT+TGG | + | chr3_2:69430763-69430782 | None:intergenic | 45.0% |
ACGAAGCAGAATATGCTGAC+TGG | - | chr3_2:69430959-69430978 | Msa0420710:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | + | chr3_2:69431193-69431212 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | + | chr3_2:69431194-69431213 | None:intergenic | 45.0% |
!! | CGGTTAATTTGTTAGGGGGA+GGG | - | chr3_2:69431379-69431398 | Msa0420710:intron | 45.0% |
!! | GGTTAATTTGTTAGGGGGAG+GGG | - | chr3_2:69431380-69431399 | Msa0420710:intron | 45.0% |
!! | GTTAATTTGTTAGGGGGAGG+GGG | - | chr3_2:69431381-69431400 | Msa0420710:intron | 45.0% |
AGGGGGATTTGTAAGTAGCA+TGG | - | chr3_2:69431398-69431417 | Msa0420710:intron | 45.0% | |
GGGACACAAAAAGAGTGGTA+TGG | + | chr3_2:69431440-69431459 | None:intergenic | 45.0% | |
CATGCTCAGTGGTATGAGTT+TGG | + | chr3_2:69431461-69431480 | None:intergenic | 45.0% | |
TGAGTGTAGATCATGCTCAG+TGG | + | chr3_2:69431472-69431491 | None:intergenic | 45.0% | |
! | GGTAATTTTACCTTGCCTGG+AGG | + | chr3_2:69431694-69431713 | None:intergenic | 45.0% |
! | CTCGGTAATTTTACCTTGCC+TGG | + | chr3_2:69431697-69431716 | None:intergenic | 45.0% |
AGGTAGGTGAGTGGATACAT+AGG | + | chr3_2:69431954-69431973 | None:intergenic | 45.0% | |
GAAATATCGAGGTAGGTGAG+TGG | + | chr3_2:69431963-69431982 | None:intergenic | 45.0% | |
TGTCTGCCACACACTTTCAT+AGG | - | chr3_2:69432012-69432031 | Msa0420710:intron | 45.0% | |
GTCTGCCACACACTTTCATA+GGG | - | chr3_2:69432013-69432032 | Msa0420710:intron | 45.0% | |
! | GAAGATGCAAGGGTACAAGT+AGG | + | chr3_2:69432488-69432507 | None:intergenic | 45.0% |
TGTAGGCTGTTGTGACTGAA+CGG | - | chr3_2:69432540-69432559 | Msa0420710:intron | 45.0% | |
AACAGTTAGGACTTAGGAGG+GGG | - | chr3_2:69432566-69432585 | Msa0420710:intron | 45.0% | |
AGAGGGCTAGAGAAATGGTA+GGG | - | chr3_2:69432602-69432621 | Msa0420710:intron | 45.0% | |
AAGGGTGAAAAGGATCCGAA+TGG | + | chr3_2:69432683-69432702 | None:intergenic | 45.0% | |
GCAAAAAGTGGAGGAAGGAT+AGG | - | chr3_2:69433274-69433293 | Msa0420710:CDS | 45.0% | |
!!! | CGGTTCTGTGCTTTTTCAGA+GGG | + | chr3_2:69429363-69429382 | None:intergenic | 45.0% |
!!! | ACGGTTCTGTGCTTTTTCAG+AGG | + | chr3_2:69429364-69429383 | None:intergenic | 45.0% |
! | CTCTAAGGAATCAACGGGTA+CGG | + | chr3_2:69429573-69429592 | None:intergenic | 45.0% |
ATTACCTGCAACAAACTCGG+AGG | - | chr3_2:69429605-69429624 | Msa0420710:intron | 45.0% | |
! | AGAAACGGGACAATCGGTTT+GGG | + | chr3_2:69429648-69429667 | None:intergenic | 45.0% |
GCGCGTTTGTAAGCACAATA+AGG | + | chr3_2:69429731-69429750 | None:intergenic | 45.0% | |
! | AGTTCCGGTTCAGGTTCAAA+CGG | + | chr3_2:69429860-69429879 | None:intergenic | 45.0% |
ACATGATCCTGAACCAGTTC+CGG | + | chr3_2:69429875-69429894 | None:intergenic | 45.0% | |
ACTTTCGGTTCATCCACTTC+CGG | + | chr3_2:69429911-69429930 | None:intergenic | 45.0% | |
GTGGATGAACCGAAAGTTTC+TGG | - | chr3_2:69429914-69429933 | Msa0420710:intron | 45.0% | |
GGAGGAAAGGTTTCTGTATC+AGG | - | chr3_2:69429986-69430005 | Msa0420710:intron | 45.0% | |
TGATTTCGAGGTTTCTGTGG+CGG | - | chr3_2:69430036-69430055 | Msa0420710:intron | 45.0% | |
TACCAAACAGACCCCAAATG+TGG | - | chr3_2:69430758-69430777 | Msa0420710:intron | 45.0% | |
! | AACCACATTTGGGGTCTGTT+TGG | + | chr3_2:69430763-69430782 | None:intergenic | 45.0% |
ACGAAGCAGAATATGCTGAC+TGG | - | chr3_2:69430959-69430978 | Msa0420710:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | + | chr3_2:69431193-69431212 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | + | chr3_2:69431194-69431213 | None:intergenic | 45.0% |
!! | CGGTTAATTTGTTAGGGGGA+GGG | - | chr3_2:69431379-69431398 | Msa0420710:intron | 45.0% |
!! | GGTTAATTTGTTAGGGGGAG+GGG | - | chr3_2:69431380-69431399 | Msa0420710:intron | 45.0% |
!! | GTTAATTTGTTAGGGGGAGG+GGG | - | chr3_2:69431381-69431400 | Msa0420710:intron | 45.0% |
AGGGGGATTTGTAAGTAGCA+TGG | - | chr3_2:69431398-69431417 | Msa0420710:intron | 45.0% | |
GGGACACAAAAAGAGTGGTA+TGG | + | chr3_2:69431440-69431459 | None:intergenic | 45.0% | |
CATGCTCAGTGGTATGAGTT+TGG | + | chr3_2:69431461-69431480 | None:intergenic | 45.0% | |
TGAGTGTAGATCATGCTCAG+TGG | + | chr3_2:69431472-69431491 | None:intergenic | 45.0% | |
! | GGTAATTTTACCTTGCCTGG+AGG | + | chr3_2:69431694-69431713 | None:intergenic | 45.0% |
! | CTCGGTAATTTTACCTTGCC+TGG | + | chr3_2:69431697-69431716 | None:intergenic | 45.0% |
AGGTAGGTGAGTGGATACAT+AGG | + | chr3_2:69431954-69431973 | None:intergenic | 45.0% | |
GAAATATCGAGGTAGGTGAG+TGG | + | chr3_2:69431963-69431982 | None:intergenic | 45.0% | |
TGTCTGCCACACACTTTCAT+AGG | - | chr3_2:69432012-69432031 | Msa0420710:intron | 45.0% | |
GTCTGCCACACACTTTCATA+GGG | - | chr3_2:69432013-69432032 | Msa0420710:intron | 45.0% | |
! | GAAGATGCAAGGGTACAAGT+AGG | + | chr3_2:69432488-69432507 | None:intergenic | 45.0% |
TGTAGGCTGTTGTGACTGAA+CGG | - | chr3_2:69432540-69432559 | Msa0420710:intron | 45.0% | |
AACAGTTAGGACTTAGGAGG+GGG | - | chr3_2:69432566-69432585 | Msa0420710:intron | 45.0% | |
AGAGGGCTAGAGAAATGGTA+GGG | - | chr3_2:69432602-69432621 | Msa0420710:intron | 45.0% | |
AAGGGTGAAAAGGATCCGAA+TGG | + | chr3_2:69432683-69432702 | None:intergenic | 45.0% | |
GCAAAAAGTGGAGGAAGGAT+AGG | - | chr3_2:69433274-69433293 | Msa0420710:CDS | 45.0% | |
!! | CGGAAGGTGTTATACTACGG+CGG | + | chr3_2:69429424-69429443 | None:intergenic | 50.0% |
!! | CGGCGGAAGGTGTTATACTA+CGG | + | chr3_2:69429427-69429446 | None:intergenic | 50.0% |
TGTTGTAGACGGCTGCATTG+TGG | + | chr3_2:69429487-69429506 | None:intergenic | 50.0% | |
! | GTCGCTGTTGCTGTTGTAGA+CGG | + | chr3_2:69429498-69429517 | None:intergenic | 50.0% |
GTCTACAACAGCAACAGCGA+CGG | - | chr3_2:69429497-69429516 | Msa0420710:exon | 50.0% | |
TACGGTTTCGGGAACGGAAT+CGG | + | chr3_2:69429555-69429574 | None:intergenic | 50.0% | |
GAATCAACGGGTACGGTTTC+GGG | + | chr3_2:69429566-69429585 | None:intergenic | 50.0% | |
GGAATCAACGGGTACGGTTT+CGG | + | chr3_2:69429567-69429586 | None:intergenic | 50.0% | |
!! | CGTACCCGTTGATTCCTTAG+AGG | - | chr3_2:69429571-69429590 | Msa0420710:CDS | 50.0% |
!! | TTCACCTCCGAGTTTGTTGC+AGG | + | chr3_2:69429612-69429631 | None:intergenic | 50.0% |
CAGAAACGGGACAATCGGTT+TGG | + | chr3_2:69429649-69429668 | None:intergenic | 50.0% | |
GTGGACAGAAACGGGACAAT+CGG | + | chr3_2:69429654-69429673 | None:intergenic | 50.0% | |
CAAGTGACGTGGACAGAAAC+GGG | + | chr3_2:69429662-69429681 | None:intergenic | 50.0% | |
GCAAGTGACGTGGACAGAAA+CGG | + | chr3_2:69429663-69429682 | None:intergenic | 50.0% | |
TCTGTCCACGTCACTTGCAT+CGG | - | chr3_2:69429665-69429684 | Msa0420710:intron | 50.0% | |
GCAACCGTTTGAACCTGAAC+CGG | - | chr3_2:69429853-69429872 | Msa0420710:intron | 50.0% | |
GTTTGAACCTGAACCGGAAC+TGG | - | chr3_2:69429859-69429878 | Msa0420710:intron | 50.0% | |
AAACCGGAATGAACCGGAAG+TGG | - | chr3_2:69429895-69429914 | Msa0420710:intron | 50.0% | |
CATCCACTTCCGGTTCATTC+CGG | + | chr3_2:69429901-69429920 | None:intergenic | 50.0% | |
! | GTTTCTGTGGCGGAGAAGAA+AGG | - | chr3_2:69430046-69430065 | Msa0420710:intron | 50.0% |
TTGCTCAGGGAACGGAAAAC+TGG | - | chr3_2:69430112-69430131 | Msa0420710:intron | 50.0% | |
!! | AAAACTGGTGGTGGTAGTGG+TGG | - | chr3_2:69430127-69430146 | Msa0420710:intron | 50.0% |
! | AGGCGTGATAAGGCTCTGAT+TGG | - | chr3_2:69430378-69430397 | Msa0420710:intron | 50.0% |
ACTAAGTGGGGTCAGCTACA+TGG | + | chr3_2:69431181-69431200 | None:intergenic | 50.0% | |
ATGTAGCTGACCCCACTTAG+TGG | - | chr3_2:69431180-69431199 | Msa0420710:CDS | 50.0% | |
TGTAGCTGACCCCACTTAGT+GGG | - | chr3_2:69431181-69431200 | Msa0420710:CDS | 50.0% | |
TGACCCCACTTAGTGGGATA+AGG | - | chr3_2:69431187-69431206 | Msa0420710:CDS | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | + | chr3_2:69431195-69431214 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | - | chr3_2:69431192-69431211 | Msa0420710:CDS | 50.0% | |
!! | GCGGTTAATTTGTTAGGGGG+AGG | - | chr3_2:69431378-69431397 | Msa0420710:intron | 50.0% |
TCGCACTCCTGTTGATCTCA+AGG | - | chr3_2:69431650-69431669 | Msa0420710:intron | 50.0% | |
!! | AATGGAGGAGCATTACCTCC+AGG | - | chr3_2:69431676-69431695 | Msa0420710:intron | 50.0% |
ACAGTTAGGACTTAGGAGGG+GGG | - | chr3_2:69432567-69432586 | Msa0420710:intron | 50.0% | |
GAGAGGGCTAGAGAAATGGT+AGG | - | chr3_2:69432601-69432620 | Msa0420710:intron | 50.0% | |
GAGGGCTAGAGAAATGGTAG+GGG | - | chr3_2:69432603-69432622 | Msa0420710:intron | 50.0% | |
AGGGCTAGAGAAATGGTAGG+GGG | - | chr3_2:69432604-69432623 | Msa0420710:intron | 50.0% | |
ATGGTAGGGGGGTGAAAAAC+TGG | - | chr3_2:69432616-69432635 | Msa0420710:CDS | 50.0% | |
GGAGAGAAAGTGGGAGAGTA+AGG | - | chr3_2:69432640-69432659 | Msa0420710:CDS | 50.0% | |
CATCACGTCTGCATGCTAGA+GGG | + | chr3_2:69432812-69432831 | None:intergenic | 50.0% | |
ACATCACGTCTGCATGCTAG+AGG | + | chr3_2:69432813-69432832 | None:intergenic | 50.0% | |
ACTTACCGGTAACGACCAAC+AGG | - | chr3_2:69433231-69433250 | Msa0420710:CDS | 50.0% | |
CTTACCGGTAACGACCAACA+GGG | - | chr3_2:69433232-69433251 | Msa0420710:CDS | 50.0% | |
TTACCGGTAACGACCAACAG+GGG | - | chr3_2:69433233-69433252 | Msa0420710:CDS | 50.0% | |
!! | CGGAAGGTGTTATACTACGG+CGG | + | chr3_2:69429424-69429443 | None:intergenic | 50.0% |
!! | CGGCGGAAGGTGTTATACTA+CGG | + | chr3_2:69429427-69429446 | None:intergenic | 50.0% |
TGTTGTAGACGGCTGCATTG+TGG | + | chr3_2:69429487-69429506 | None:intergenic | 50.0% | |
! | GTCGCTGTTGCTGTTGTAGA+CGG | + | chr3_2:69429498-69429517 | None:intergenic | 50.0% |
GTCTACAACAGCAACAGCGA+CGG | - | chr3_2:69429497-69429516 | Msa0420710:exon | 50.0% | |
TACGGTTTCGGGAACGGAAT+CGG | + | chr3_2:69429555-69429574 | None:intergenic | 50.0% | |
GAATCAACGGGTACGGTTTC+GGG | + | chr3_2:69429566-69429585 | None:intergenic | 50.0% | |
GGAATCAACGGGTACGGTTT+CGG | + | chr3_2:69429567-69429586 | None:intergenic | 50.0% | |
!! | CGTACCCGTTGATTCCTTAG+AGG | - | chr3_2:69429571-69429590 | Msa0420710:CDS | 50.0% |
!! | TTCACCTCCGAGTTTGTTGC+AGG | + | chr3_2:69429612-69429631 | None:intergenic | 50.0% |
CAGAAACGGGACAATCGGTT+TGG | + | chr3_2:69429649-69429668 | None:intergenic | 50.0% | |
GTGGACAGAAACGGGACAAT+CGG | + | chr3_2:69429654-69429673 | None:intergenic | 50.0% | |
CAAGTGACGTGGACAGAAAC+GGG | + | chr3_2:69429662-69429681 | None:intergenic | 50.0% | |
GCAAGTGACGTGGACAGAAA+CGG | + | chr3_2:69429663-69429682 | None:intergenic | 50.0% | |
TCTGTCCACGTCACTTGCAT+CGG | - | chr3_2:69429665-69429684 | Msa0420710:intron | 50.0% | |
GCAACCGTTTGAACCTGAAC+CGG | - | chr3_2:69429853-69429872 | Msa0420710:intron | 50.0% | |
GTTTGAACCTGAACCGGAAC+TGG | - | chr3_2:69429859-69429878 | Msa0420710:intron | 50.0% | |
AAACCGGAATGAACCGGAAG+TGG | - | chr3_2:69429895-69429914 | Msa0420710:intron | 50.0% | |
CATCCACTTCCGGTTCATTC+CGG | + | chr3_2:69429901-69429920 | None:intergenic | 50.0% | |
! | GTTTCTGTGGCGGAGAAGAA+AGG | - | chr3_2:69430046-69430065 | Msa0420710:intron | 50.0% |
TTGCTCAGGGAACGGAAAAC+TGG | - | chr3_2:69430112-69430131 | Msa0420710:intron | 50.0% | |
!! | AAAACTGGTGGTGGTAGTGG+TGG | - | chr3_2:69430127-69430146 | Msa0420710:intron | 50.0% |
! | AGGCGTGATAAGGCTCTGAT+TGG | - | chr3_2:69430378-69430397 | Msa0420710:intron | 50.0% |
ACTAAGTGGGGTCAGCTACA+TGG | + | chr3_2:69431181-69431200 | None:intergenic | 50.0% | |
ATGTAGCTGACCCCACTTAG+TGG | - | chr3_2:69431180-69431199 | Msa0420710:CDS | 50.0% | |
TGTAGCTGACCCCACTTAGT+GGG | - | chr3_2:69431181-69431200 | Msa0420710:CDS | 50.0% | |
TGACCCCACTTAGTGGGATA+AGG | - | chr3_2:69431187-69431206 | Msa0420710:CDS | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | + | chr3_2:69431195-69431214 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | - | chr3_2:69431192-69431211 | Msa0420710:CDS | 50.0% | |
!! | GCGGTTAATTTGTTAGGGGG+AGG | - | chr3_2:69431378-69431397 | Msa0420710:intron | 50.0% |
TCGCACTCCTGTTGATCTCA+AGG | - | chr3_2:69431650-69431669 | Msa0420710:intron | 50.0% | |
!! | AATGGAGGAGCATTACCTCC+AGG | - | chr3_2:69431676-69431695 | Msa0420710:intron | 50.0% |
ACAGTTAGGACTTAGGAGGG+GGG | - | chr3_2:69432567-69432586 | Msa0420710:intron | 50.0% | |
GAGAGGGCTAGAGAAATGGT+AGG | - | chr3_2:69432601-69432620 | Msa0420710:intron | 50.0% | |
GAGGGCTAGAGAAATGGTAG+GGG | - | chr3_2:69432603-69432622 | Msa0420710:intron | 50.0% | |
AGGGCTAGAGAAATGGTAGG+GGG | - | chr3_2:69432604-69432623 | Msa0420710:intron | 50.0% | |
ATGGTAGGGGGGTGAAAAAC+TGG | - | chr3_2:69432616-69432635 | Msa0420710:CDS | 50.0% | |
GGAGAGAAAGTGGGAGAGTA+AGG | - | chr3_2:69432640-69432659 | Msa0420710:CDS | 50.0% | |
CATCACGTCTGCATGCTAGA+GGG | + | chr3_2:69432812-69432831 | None:intergenic | 50.0% | |
ACATCACGTCTGCATGCTAG+AGG | + | chr3_2:69432813-69432832 | None:intergenic | 50.0% | |
ACTTACCGGTAACGACCAAC+AGG | - | chr3_2:69433231-69433250 | Msa0420710:CDS | 50.0% | |
CTTACCGGTAACGACCAACA+GGG | - | chr3_2:69433232-69433251 | Msa0420710:CDS | 50.0% | |
TTACCGGTAACGACCAACAG+GGG | - | chr3_2:69433233-69433252 | Msa0420710:CDS | 50.0% | |
TATACTACGGCGGCGAACAC+CGG | + | chr3_2:69429414-69429433 | None:intergenic | 55.0% | |
GAGGAGAGGAATTGGAGAGG+CGG | + | chr3_2:69429447-69429466 | None:intergenic | 55.0% | |
GGAGAGGAGAGGAATTGGAG+AGG | + | chr3_2:69429450-69429469 | None:intergenic | 55.0% | |
! | GTGGTGGAGAGGAGAGGAAT+TGG | + | chr3_2:69429455-69429474 | None:intergenic | 55.0% |
! | ATTGTGGTCGTCGTTGGTGG+TGG | + | chr3_2:69429471-69429490 | None:intergenic | 55.0% |
TGCATTGTGGTCGTCGTTGG+TGG | + | chr3_2:69429474-69429493 | None:intergenic | 55.0% | |
TACAACAGCAACAGCGACGG+CGG | - | chr3_2:69429500-69429519 | Msa0420710:exon | 55.0% | |
GAAGTGGAGTGTGAGTGTGG+TGG | + | chr3_2:69429532-69429551 | None:intergenic | 55.0% | |
ACGGTTTCGGGAACGGAATC+GGG | + | chr3_2:69429554-69429573 | None:intergenic | 55.0% | |
AACGGGTACGGTTTCGGGAA+CGG | + | chr3_2:69429561-69429580 | None:intergenic | 55.0% | |
! | ACCTGAACCGGAACTGGTTC+AGG | - | chr3_2:69429865-69429884 | Msa0420710:intron | 55.0% |
TCCTGAACCAGTTCCGGTTC+AGG | + | chr3_2:69429869-69429888 | None:intergenic | 55.0% | |
CTCAGGGAACGGAAAACTGG+TGG | - | chr3_2:69430115-69430134 | Msa0420710:intron | 55.0% | |
AGGGAACGGAAAACTGGTGG+TGG | - | chr3_2:69430118-69430137 | Msa0420710:intron | 55.0% | |
!! | CGGAAAACTGGTGGTGGTAG+TGG | - | chr3_2:69430124-69430143 | Msa0420710:intron | 55.0% |
!! | AGGAGCATTACCTCCAGGCA+AGG | - | chr3_2:69431681-69431700 | Msa0420710:intron | 55.0% |
CAGTTAGGACTTAGGAGGGG+GGG | - | chr3_2:69432568-69432587 | Msa0420710:intron | 55.0% | |
! | GGGGGGAGGAGTATAAGAGA+GGG | - | chr3_2:69432585-69432604 | Msa0420710:intron | 55.0% |
GGGCTAGAGAAATGGTAGGG+GGG | - | chr3_2:69432605-69432624 | Msa0420710:intron | 55.0% | |
GTAGGGGGGTGAAAAACTGG+TGG | - | chr3_2:69432619-69432638 | Msa0420710:CDS | 55.0% | |
ACTCCCCTGTTGGTCGTTAC+CGG | + | chr3_2:69433239-69433258 | None:intergenic | 55.0% | |
TATACTACGGCGGCGAACAC+CGG | + | chr3_2:69429414-69429433 | None:intergenic | 55.0% | |
GAGGAGAGGAATTGGAGAGG+CGG | + | chr3_2:69429447-69429466 | None:intergenic | 55.0% | |
GGAGAGGAGAGGAATTGGAG+AGG | + | chr3_2:69429450-69429469 | None:intergenic | 55.0% | |
! | GTGGTGGAGAGGAGAGGAAT+TGG | + | chr3_2:69429455-69429474 | None:intergenic | 55.0% |
! | ATTGTGGTCGTCGTTGGTGG+TGG | + | chr3_2:69429471-69429490 | None:intergenic | 55.0% |
TGCATTGTGGTCGTCGTTGG+TGG | + | chr3_2:69429474-69429493 | None:intergenic | 55.0% | |
TACAACAGCAACAGCGACGG+CGG | - | chr3_2:69429500-69429519 | Msa0420710:exon | 55.0% | |
GAAGTGGAGTGTGAGTGTGG+TGG | + | chr3_2:69429532-69429551 | None:intergenic | 55.0% | |
ACGGTTTCGGGAACGGAATC+GGG | + | chr3_2:69429554-69429573 | None:intergenic | 55.0% | |
AACGGGTACGGTTTCGGGAA+CGG | + | chr3_2:69429561-69429580 | None:intergenic | 55.0% | |
! | ACCTGAACCGGAACTGGTTC+AGG | - | chr3_2:69429865-69429884 | Msa0420710:intron | 55.0% |
TCCTGAACCAGTTCCGGTTC+AGG | + | chr3_2:69429869-69429888 | None:intergenic | 55.0% | |
CTCAGGGAACGGAAAACTGG+TGG | - | chr3_2:69430115-69430134 | Msa0420710:intron | 55.0% | |
AGGGAACGGAAAACTGGTGG+TGG | - | chr3_2:69430118-69430137 | Msa0420710:intron | 55.0% | |
!! | CGGAAAACTGGTGGTGGTAG+TGG | - | chr3_2:69430124-69430143 | Msa0420710:intron | 55.0% |
!! | AGGAGCATTACCTCCAGGCA+AGG | - | chr3_2:69431681-69431700 | Msa0420710:intron | 55.0% |
CAGTTAGGACTTAGGAGGGG+GGG | - | chr3_2:69432568-69432587 | Msa0420710:intron | 55.0% | |
! | GGGGGGAGGAGTATAAGAGA+GGG | - | chr3_2:69432585-69432604 | Msa0420710:intron | 55.0% |
GGGCTAGAGAAATGGTAGGG+GGG | - | chr3_2:69432605-69432624 | Msa0420710:intron | 55.0% | |
GTAGGGGGGTGAAAAACTGG+TGG | - | chr3_2:69432619-69432638 | Msa0420710:CDS | 55.0% | |
ACTCCCCTGTTGGTCGTTAC+CGG | + | chr3_2:69433239-69433258 | None:intergenic | 55.0% | |
GAGAGGAATTGGAGAGGCGG+CGG | + | chr3_2:69429444-69429463 | None:intergenic | 60.0% | |
!! | TCGTTGGTGGTGGAGAGGAG+AGG | + | chr3_2:69429461-69429480 | None:intergenic | 60.0% |
GGCTGCATTGTGGTCGTCGT+TGG | + | chr3_2:69429477-69429496 | None:intergenic | 60.0% | |
CGGGAAGTGGAGTGTGAGTG+TGG | + | chr3_2:69429535-69429554 | None:intergenic | 60.0% | |
TCGGGAACGGAATCGGGAAG+TGG | + | chr3_2:69429548-69429567 | None:intergenic | 60.0% | |
CGGAACCGATGCAAGTGACG+TGG | + | chr3_2:69429673-69429692 | None:intergenic | 60.0% | |
!! | ACTGGTGGTGGTAGTGGTGG+TGG | - | chr3_2:69430130-69430149 | Msa0420710:intron | 60.0% |
!! | TGGTGGTGGTGACGTAGACG+AGG | - | chr3_2:69430150-69430169 | Msa0420710:intron | 60.0% |
! | TGGTGGTGACGTAGACGAGG+AGG | - | chr3_2:69430153-69430172 | Msa0420710:intron | 60.0% |
TTAGGACTTAGGAGGGGGGG+AGG | - | chr3_2:69432571-69432590 | Msa0420710:intron | 60.0% | |
! | GGGGGGGAGGAGTATAAGAG+AGG | - | chr3_2:69432584-69432603 | Msa0420710:intron | 60.0% |
GAGAGGAATTGGAGAGGCGG+CGG | + | chr3_2:69429444-69429463 | None:intergenic | 60.0% | |
!! | TCGTTGGTGGTGGAGAGGAG+AGG | + | chr3_2:69429461-69429480 | None:intergenic | 60.0% |
GGCTGCATTGTGGTCGTCGT+TGG | + | chr3_2:69429477-69429496 | None:intergenic | 60.0% | |
CGGGAAGTGGAGTGTGAGTG+TGG | + | chr3_2:69429535-69429554 | None:intergenic | 60.0% | |
TCGGGAACGGAATCGGGAAG+TGG | + | chr3_2:69429548-69429567 | None:intergenic | 60.0% | |
CGGAACCGATGCAAGTGACG+TGG | + | chr3_2:69429673-69429692 | None:intergenic | 60.0% | |
!! | ACTGGTGGTGGTAGTGGTGG+TGG | - | chr3_2:69430130-69430149 | Msa0420710:intron | 60.0% |
!! | TGGTGGTGGTGACGTAGACG+AGG | - | chr3_2:69430150-69430169 | Msa0420710:intron | 60.0% |
! | TGGTGGTGACGTAGACGAGG+AGG | - | chr3_2:69430153-69430172 | Msa0420710:intron | 60.0% |
TTAGGACTTAGGAGGGGGGG+AGG | - | chr3_2:69432571-69432590 | Msa0420710:intron | 60.0% | |
! | GGGGGGGAGGAGTATAAGAG+AGG | - | chr3_2:69432584-69432603 | Msa0420710:intron | 60.0% |
GGAATTGGAGAGGCGGCGGA+AGG | + | chr3_2:69429440-69429459 | None:intergenic | 65.0% | |
!! | GGTCGTCGTTGGTGGTGGAG+AGG | + | chr3_2:69429466-69429485 | None:intergenic | 65.0% |
!! | GGTGGTGGTAGTGGTGGTGG+TGG | - | chr3_2:69430133-69430152 | Msa0420710:intron | 65.0% |
!! | GGTGGTAGTGGTGGTGGTGG+TGG | - | chr3_2:69430136-69430155 | Msa0420710:intron | 65.0% |
GGAATTGGAGAGGCGGCGGA+AGG | + | chr3_2:69429440-69429459 | None:intergenic | 65.0% | |
!! | GGTCGTCGTTGGTGGTGGAG+AGG | + | chr3_2:69429466-69429485 | None:intergenic | 65.0% |
!! | GGTGGTGGTAGTGGTGGTGG+TGG | - | chr3_2:69430133-69430152 | Msa0420710:intron | 65.0% |
!! | GGTGGTAGTGGTGGTGGTGG+TGG | - | chr3_2:69430136-69430155 | Msa0420710:intron | 65.0% |
GCGGCGAACACCGGTGACGA+CGG | + | chr3_2:69429405-69429424 | None:intergenic | 70.0% | |
GCGGCGAACACCGGTGACGA+CGG | + | chr3_2:69429405-69429424 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 69429352 | 69433470 | 69429352 | ID=Msa0420710;Name=Msa0420710 |
chr3_2 | mRNA | 69429352 | 69433470 | 69429352 | ID=Msa0420710-mRNA-1;Parent=Msa0420710;Name=Msa0420710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=37|0.66|0.75|1|1|1|4|155|378 |
chr3_2 | exon | 69429352 | 69429609 | 69429352 | ID=Msa0420710-mRNA-1:exon:16504;Parent=Msa0420710-mRNA-1 |
chr3_2 | exon | 69431125 | 69431258 | 69431125 | ID=Msa0420710-mRNA-1:exon:16503;Parent=Msa0420710-mRNA-1 |
chr3_2 | exon | 69431792 | 69431864 | 69431792 | ID=Msa0420710-mRNA-1:exon:16502;Parent=Msa0420710-mRNA-1 |
chr3_2 | exon | 69432607 | 69433470 | 69432607 | ID=Msa0420710-mRNA-1:exon:16501;Parent=Msa0420710-mRNA-1 |
chr3_2 | five_prime_UTR | 69433434 | 69433470 | 69433434 | ID=Msa0420710-mRNA-1:five_prime_utr;Parent=Msa0420710-mRNA-1 |
chr3_2 | CDS | 69432607 | 69433433 | 69432607 | ID=Msa0420710-mRNA-1:cds;Parent=Msa0420710-mRNA-1 |
chr3_2 | CDS | 69431792 | 69431864 | 69431792 | ID=Msa0420710-mRNA-1:cds;Parent=Msa0420710-mRNA-1 |
chr3_2 | CDS | 69431125 | 69431258 | 69431125 | ID=Msa0420710-mRNA-1:cds;Parent=Msa0420710-mRNA-1 |
chr3_2 | CDS | 69429507 | 69429609 | 69429507 | ID=Msa0420710-mRNA-1:cds;Parent=Msa0420710-mRNA-1 |
chr3_2 | three_prime_UTR | 69429352 | 69429506 | 69429352 | ID=Msa0420710-mRNA-1:three_prime_utr;Parent=Msa0420710-mRNA-1 |
Gene Sequence |
Protein sequence |