AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0427250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0427250 MtrunA17_Chr8g0383971 54.211 380 140 10 1 364 1 362 1.15e-107 336
Msa0427250 MtrunA17_Chr8g0383971 48.128 187 58 4 449 606 355 531 5.29e-41 157
Msa0427250 MtrunA17_Chr3g0129691 94.624 186 9 1 421 606 159 343 2.47e-103 318
Msa0427250 MtrunA17_Chr3g0129691 94.444 162 9 0 1 162 1 162 8.23e-91 286
Msa0427250 MtrunA17_Chr5g0428811 35.094 587 277 20 9 561 8 524 1.95e-82 271
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0427250 AT3G18770.1 49.150 588 244 17 11 581 14 563 5.77e-113 352
Msa0427250 AT3G49590.1 36.396 283 139 4 10 283 9 259 1.35e-46 174
Msa0427250 AT3G49590.2 36.396 283 139 4 10 283 9 259 1.35e-46 174
Msa0427250 AT3G49590.3 36.396 283 139 4 10 283 9 259 2.21e-46 174

Find 128 sgRNAs with CRISPR-Local

Find 688 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACCTTTGGAGAGAAATTA+AGG 0.234169 3_2:+77947164 None:intergenic
AGAAACCCCTTTGAAGAATT+AGG 0.243271 3_2:-77947124 Msa0427250:CDS
GCTTCTTGTTTAGTAGTAAA+TGG 0.254563 3_2:+77946824 None:intergenic
GCAAGAGAAATCCTTTACTA+TGG 0.255535 3_2:-77936273 Msa0427250:CDS
TGTTCTGATATGTTGGTTAC+TGG 0.264609 3_2:+77947506 None:intergenic
TTATGAAAGCAAGAAAATTA+AGG 0.283270 3_2:-77947053 Msa0427250:CDS
TTCTGGTAGGCTGTGTTTAT+CGG 0.301005 3_2:-77946762 Msa0427250:CDS
TAGATTGAACCATTTGTCTC+TGG 0.302069 3_2:+77947285 None:intergenic
AATAAGTTAAGGATTTGTTT+GGG 0.314494 3_2:+77947534 None:intergenic
AAATAAGTTAAGGATTTGTT+TGG 0.318244 3_2:+77947533 None:intergenic
CAACTATGTCTCCTCGAAAA+TGG 0.326218 3_2:+77946572 None:intergenic
ACTTGAACATCATTCTTAAC+AGG 0.326729 3_2:+77936322 None:intergenic
AATTGTGGTTGATGTTGTTT+TGG 0.332000 3_2:-77947197 Msa0427250:CDS
GAATTAGCAACTTCAGCATT+AGG 0.344777 3_2:+77946245 None:intergenic
CCAGTGAGCACAATGTCTTA+TGG 0.355804 3_2:-77941536 Msa0427250:CDS
TTTACAAAAGATCGAACCTT+TGG 0.360433 3_2:+77947151 None:intergenic
GAGCTCTAGCAGGTCTTATC+AGG 0.364942 3_2:-77945918 Msa0427250:CDS
GTGCACCTTGAAATTCTAAT+AGG 0.367047 3_2:+77946182 None:intergenic
TTCACCTTCACCTACACATT+CGG 0.390828 3_2:-77946504 Msa0427250:CDS
CAGTGAGCACAATGTCTTAT+GGG 0.398369 3_2:-77941535 Msa0427250:CDS
ATGAGAAGATTGTTGAAAGA+TGG 0.400050 3_2:-77947084 Msa0427250:CDS
GAGGGAGATGGAGAGAAATT+CGG 0.400789 3_2:+77946353 None:intergenic
GCACCTTGAGACTTTCTGAT+TGG 0.405605 3_2:+77941710 None:intergenic
CACTGGTGAAAACTTGTCTC+AGG 0.410890 3_2:-77941627 Msa0427250:CDS
CTACTCCTATTAGAATTTCA+AGG 0.412567 3_2:-77946187 Msa0427250:CDS
ACTCCTGTGGATACTAATTC+TGG 0.420684 3_2:-77946779 Msa0427250:CDS
AAAACAACATCAACCACAAT+TGG 0.420756 3_2:+77947199 None:intergenic
TACTGGAACAAAATAAGTTA+AGG 0.423643 3_2:+77947523 None:intergenic
GCACAATGTCTTATGGGAAT+AGG 0.432338 3_2:-77941529 Msa0427250:CDS
CACTTGAAAACGCTGACCTA+TGG 0.440498 3_2:-77947240 Msa0427250:CDS
ACATTGTGCTCACTGGTGTT+AGG 0.442174 3_2:+77941543 None:intergenic
GTGTTAGGCTCTCTAGAATC+TGG 0.448222 3_2:+77941558 None:intergenic
TCTTGTAGTGTTTGCAGTGT+TGG 0.448276 3_2:+77947018 None:intergenic
GCTGAAGTTGCTAATTCCTC+TGG 0.449371 3_2:-77946239 Msa0427250:CDS
ATAAGACCTGCTAGAGCTCC+TGG 0.452474 3_2:+77945922 None:intergenic
TGTGGAGACAAAGGAGTTGT+TGG 0.454147 3_2:+77946701 None:intergenic
CTTTCAGTCCAATCTAAAAG+AGG 0.460492 3_2:+77947574 None:intergenic
ATGATGCAACATACCTTCTC+AGG 0.465690 3_2:+77946113 None:intergenic
TAAGTTTGTGTTCACTCCTG+TGG 0.467225 3_2:-77946792 Msa0427250:CDS
GATGAAGAAGGAGAGGGAGA+TGG 0.469660 3_2:+77946341 None:intergenic
AATGACCGCAAACTATAGAT+AGG 0.476662 3_2:+77946314 None:intergenic
AGGTGATGATGAAGAAGGAG+AGG 0.478454 3_2:+77946334 None:intergenic
CCCTTTGAAGAATTAGGAGG+TGG 0.478837 3_2:-77947118 Msa0427250:CDS
GTTTCTAATGCTAGCTCTCA+AGG 0.480022 3_2:-77946467 Msa0427250:CDS
AAATCCTTTACTATGGGCAT+TGG 0.480372 3_2:-77936266 Msa0427250:CDS
TCGTCATCATCCACGTCAAA+AGG 0.481721 3_2:+77945866 None:intergenic
GTATGTTTCTGATGTGAGTT+CGG 0.485339 3_2:-77946726 Msa0427250:CDS
TCAGTTCTGTTCTGATATGT+TGG 0.487194 3_2:+77947499 None:intergenic
AAACCTTAATTTCTCTCCAA+AGG 0.489105 3_2:-77947167 Msa0427250:CDS
CCACCTCCTAATTCTTCAAA+GGG 0.489333 3_2:+77947118 None:intergenic
TGTGATGGCATTCTAACAAC+AGG 0.493637 3_2:+77946617 None:intergenic
AGTTGAAGATGGTGAAGAGA+GGG 0.500275 3_2:+77947336 None:intergenic
AGATTGAACCATTTGTCTCT+GGG 0.504376 3_2:+77947286 None:intergenic
CAAGAGAAATCCTTTACTAT+GGG 0.504409 3_2:-77936272 Msa0427250:CDS
TCGGTAGTCCTTTGACTGAT+CGG 0.505474 3_2:-77946661 Msa0427250:CDS
GAAGATTATTGTGGCGCCAT+AGG 0.506592 3_2:+77947224 None:intergenic
CCATAAGACATTGTGCTCAC+TGG 0.510597 3_2:+77941536 None:intergenic
CATCACCTATCTATAGTTTG+CGG 0.512684 3_2:-77946319 Msa0427250:CDS
TTGTCCAATGCCCATAGTAA+AGG 0.512867 3_2:+77936262 None:intergenic
CTCTTGATTCTATGATTATG+TGG 0.516420 3_2:+77947389 None:intergenic
GACATTTCACTTGGATGAGG+AGG 0.516778 3_2:+77946422 None:intergenic
AGGCTCTCTAGAATCTGGTT+CGG 0.521290 3_2:+77941563 None:intergenic
GGTGATGATGAAGAAGGAGA+GGG 0.521681 3_2:+77946335 None:intergenic
CCCACCTCCTAATTCTTCAA+AGG 0.522947 3_2:+77947117 None:intergenic
TGAAGCAAAGACATTTCACT+TGG 0.523242 3_2:+77946413 None:intergenic
GTGACGAAATACCTGCTGCC+TGG 0.524562 3_2:+77945833 None:intergenic
CTTCTGAGACGGAGAGAAGT+AGG 0.524609 3_2:-77946160 Msa0427250:CDS
GATGACGATACAACGGATCC+AGG 0.530434 3_2:-77945851 Msa0427250:CDS
ATGACTCAACTTCTTGAAGC+TGG 0.533846 3_2:-77941743 Msa0427250:CDS
GTGTTCGACCCAGAGACAAA+TGG 0.534628 3_2:-77947294 Msa0427250:CDS
AAGTTGAAGATGGTGAAGAG+AGG 0.544147 3_2:+77947335 None:intergenic
CAATAATCTTCAGCCAATTG+TGG 0.545469 3_2:-77947212 Msa0427250:CDS
TTCAAGGTGCACTTCTGAGA+CGG 0.551391 3_2:-77946171 Msa0427250:CDS
TAGATAGGTGATGATGAAGA+AGG 0.554958 3_2:+77946329 None:intergenic
CTATGGGCATTGGACAAGTA+CGG 0.556917 3_2:-77936256 Msa0427250:CDS
GAATAATAATTAACTGTAGG+AGG 0.556994 3_2:+77946524 None:intergenic
CTGCATCAAGACTTCTCCAC+TGG 0.558770 3_2:-77941644 Msa0427250:CDS
AAAGACATTTCACTTGGATG+AGG 0.562423 3_2:+77946419 None:intergenic
GGTGAATAATAATTAACTGT+AGG 0.562951 3_2:+77946521 None:intergenic
TCAGCATTAGGTATGTTGAC+AGG 0.567209 3_2:+77946257 None:intergenic
GAAGATGAAGAAGTTGAAGA+TGG 0.569202 3_2:+77947325 None:intergenic
ATACAACGGATCCAGGCAGC+AGG 0.570876 3_2:-77945844 Msa0427250:intron
ACATAATCAGTTATAACTTG+TGG 0.573505 3_2:+77946683 None:intergenic
GCATTGGACAAGTACGGATG+AGG 0.579255 3_2:-77936250 None:intergenic
GTTATAACTTGTGGAGACAA+AGG 0.588424 3_2:+77946692 None:intergenic
ATAAGTTAAGGATTTGTTTG+GGG 0.589430 3_2:+77947535 None:intergenic
CTACCAGAATTAGTATCCAC+AGG 0.589896 3_2:+77946776 None:intergenic
TGCTTCAGTTTGAGCGTGTG+AGG 0.590550 3_2:+77947456 None:intergenic
CTCGAAAATGGCAATGACGA+CGG 0.592943 3_2:+77946584 None:intergenic
CTCATCAACCGATCAGTCAA+AGG 0.593790 3_2:+77946653 None:intergenic
AAGTCTCAAGGTGCCGCTGT+TGG 0.594638 3_2:-77941701 Msa0427250:CDS
GACGGAGAAGAGCCATGTGA+TGG 0.601182 3_2:+77946602 None:intergenic
GAAATTCTAATAGGAGTAGA+CGG 0.601578 3_2:+77946191 None:intergenic
GATGGAGAGAAATTCGGTGA+GGG 0.602678 3_2:+77946359 None:intergenic
CTTTGACTGATCGGTTGATG+AGG 0.605573 3_2:-77946652 Msa0427250:CDS
ACATTCGGAATCACACACAT+TGG 0.606208 3_2:-77946489 Msa0427250:CDS
TGCAGTAGGACATTCTCTGA+GGG 0.607404 3_2:+77947261 None:intergenic
GTGGAGAAGTCTTGATGCAG+AGG 0.607632 3_2:+77941647 None:intergenic
ACTGGTGAAAACTTGTCTCA+GGG 0.609755 3_2:-77941626 Msa0427250:CDS
ATCATGCATTATGCCTGAGA+AGG 0.611310 3_2:-77946126 Msa0427250:intron
TTTCCAATCAGAAAGTCTCA+AGG 0.615481 3_2:-77941713 Msa0427250:CDS
CTGTGGATACTAATTCTGGT+AGG 0.618588 3_2:-77946775 Msa0427250:CDS
TCTGGGTCGAACACTTGATG+AGG 0.624098 3_2:+77947303 None:intergenic
GGATGAGGAGGCAAACTAGA+GGG 0.624466 3_2:+77946434 None:intergenic
AGATGGAGAGAAATTCGGTG+AGG 0.625978 3_2:+77946358 None:intergenic
ATTCCTCTGGACATAGCAGT+AGG 0.626939 3_2:-77946226 Msa0427250:CDS
AACCCCTTTGAAGAATTAGG+AGG 0.632921 3_2:-77947121 Msa0427250:CDS
CAATTGGCTGAAGATTATTG+TGG 0.637979 3_2:+77947215 None:intergenic
CCTTTGAAGAATTAGGAGGT+GGG 0.638950 3_2:-77947117 Msa0427250:CDS
ACACTGCAAACACTACAAGA+AGG 0.644134 3_2:-77947015 Msa0427250:CDS
GTTGTTAGAATGCCATCACA+TGG 0.644232 3_2:-77946614 Msa0427250:CDS
GAACTCACATCAGAAACATA+CGG 0.644354 3_2:+77946728 None:intergenic
ATGCCTACTGCTATGTCCAG+AGG 0.647453 3_2:+77946223 None:intergenic
CTCAACTTCTTGAAGCTGGT+AGG 0.648198 3_2:-77941739 Msa0427250:CDS
ATTCTAACAACAGGAAGCGA+CGG 0.649152 3_2:+77946626 None:intergenic
CAAGTTATAACTGATTATGT+CGG 0.655806 3_2:-77946680 Msa0427250:CDS
CATATCAGAACAGAACTGAA+CGG 0.661721 3_2:-77947495 Msa0427250:five_prime_UTR
GTGCAGTAGGACATTCTCTG+AGG 0.662013 3_2:+77947260 None:intergenic
CACCTCCTAATTCTTCAAAG+GGG 0.662367 3_2:+77947119 None:intergenic
TGAGGAGGCAAACTAGAGGG+TGG 0.663076 3_2:+77946437 None:intergenic
AGAGCGGAATCTTTCGATCG+TGG 0.666074 3_2:-77941770 Msa0427250:CDS
TGGATGAGGAGGCAAACTAG+AGG 0.668714 3_2:+77946433 None:intergenic
CGTGGATGATGACGATACAA+CGG 0.685449 3_2:-77945858 Msa0427250:CDS
GTGTGTGATTCCGAATGTGT+AGG 0.689442 3_2:+77946494 None:intergenic
ATGCACAAGTGCACCAACAG+CGG 0.706901 3_2:+77941688 None:intergenic
GATTCCGAATGTGTAGGTGA+AGG 0.732416 3_2:+77946500 None:intergenic
CTCCTGGAAAATGAAATCTG+TGG 0.734408 3_2:+77945938 None:intergenic
ATTCTAATAGGAGTAGACGG+CGG 0.805061 3_2:+77946194 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAATAATAAAAAAAAA+GGG + chr3_2:77943885-77943904 None:intergenic 0.0%
!! TTAAAAAATAATAAAAAAAA+AGG + chr3_2:77943886-77943905 None:intergenic 0.0%
!! TGCTAATTTATATTAATATA+TGG + chr3_2:77938241-77938260 None:intergenic 10.0%
!!! ACAATTTCTTTTTATAAATT+TGG - chr3_2:77939342-77939361 Msa0427250:intron 10.0%
!!! TTCATATTTTTTTTTACAAA+GGG + chr3_2:77939683-77939702 None:intergenic 10.0%
!!! TTTCATATTTTTTTTTACAA+AGG + chr3_2:77939684-77939703 None:intergenic 10.0%
!! TTAATATAATCTTGAAAATT+TGG + chr3_2:77943323-77943342 None:intergenic 10.0%
!! AGATTATATTAATGAAAATT+TGG - chr3_2:77943331-77943350 Msa0427250:intron 10.0%
!!! AAACAAATTTTAATTTAACA+AGG - chr3_2:77943750-77943769 Msa0427250:intron 10.0%
!!! ATTGTTGATTTATTATTATA+TGG + chr3_2:77945053-77945072 None:intergenic 10.0%
!!! AAAAATTATTTTCAAATTGT+TGG - chr3_2:77945078-77945097 Msa0427250:intron 10.0%
!! TATAAATTTATCAATATATG+TGG + chr3_2:77945465-77945484 None:intergenic 10.0%
!!! TATCTTTTTTTTTTTTGAAA+CGG - chr3_2:77945488-77945507 Msa0427250:intron 10.0%
!!! TTTTATATAATATCTAATCT+AGG - chr3_2:77945829-77945848 Msa0427250:intron 10.0%
!! TTCTATAAAAAAATTGTAAT+AGG + chr3_2:77946534-77946553 None:intergenic 10.0%
!! TAATTAAAGTGATTTATATT+TGG - chr3_2:77947023-77947042 Msa0427250:CDS 10.0%
!! ATTGAAAGAAAAATAGAAAT+AGG - chr3_2:77941696-77941715 Msa0427250:CDS 15.0%
!!! AGTTAAACATGTTTTTTTTT+AGG - chr3_2:77943037-77943056 Msa0427250:intron 15.0%
!!! GTTAAACATGTTTTTTTTTA+GGG - chr3_2:77943038-77943057 Msa0427250:intron 15.0%
!!! TAGCTCAAAATTTTATTATT+AGG + chr3_2:77943358-77943377 None:intergenic 15.0%
!!! AAGCAAATTTTAATTTTACA+AGG - chr3_2:77943449-77943468 Msa0427250:intron 15.0%
!!! TTACTTTTATCTTGAATTTT+TGG + chr3_2:77943614-77943633 None:intergenic 15.0%
!!! TAAAATATTTTGACAGATTT+TGG + chr3_2:77943809-77943828 None:intergenic 15.0%
!!! ATTATTTTTTAATCTTGACA+TGG - chr3_2:77943894-77943913 Msa0427250:intron 15.0%
!!! AATTGCTATTTTTTTTGTTA+GGG + chr3_2:77946699-77946718 None:intergenic 15.0%
!!! AAATTGCTATTTTTTTTGTT+AGG + chr3_2:77946700-77946719 None:intergenic 15.0%
!!! TTTTCCCATTTTTTTTAAAA+AGG - chr3_2:77946868-77946887 Msa0427250:CDS 15.0%
!!! TTTCCCATTTTTTTTAAAAA+GGG - chr3_2:77946869-77946888 Msa0427250:CDS 15.0%
!! TTTGAAAAACTATACATAAA+AGG + chr3_2:77947391-77947410 None:intergenic 15.0%
!! TAAATCATTATTCTAACTAT+AGG - chr3_2:77947440-77947459 Msa0427250:CDS 15.0%
!! AAATCATTATTCTAACTATA+GGG - chr3_2:77947441-77947460 Msa0427250:CDS 15.0%
!!! AAAAAAAACCTCTTTTAGAT+TGG - chr3_2:77936267-77936286 Msa0427250:CDS 20.0%
!!! AATAAGTTAAGGATTTGTTT+GGG + chr3_2:77936318-77936337 None:intergenic 20.0%
!!! AAATAAGTTAAGGATTTGTT+TGG + chr3_2:77936319-77936338 None:intergenic 20.0%
!! TTATGAAAGCAAGAAAATTA+AGG - chr3_2:77936796-77936815 Msa0427250:intron 20.0%
!! AACAAAACATTCAATATGAT+TGG + chr3_2:77937773-77937792 None:intergenic 20.0%
!! TGATCCAAATAACATTAAAA+TGG - chr3_2:77938607-77938626 Msa0427250:intron 20.0%
!!! TTCCAAATTATGTGATTTTT+TGG - chr3_2:77938716-77938735 Msa0427250:intron 20.0%
!! ATCCAAAAAATCACATAATT+TGG + chr3_2:77938721-77938740 None:intergenic 20.0%
!! AATTGTAATCAAACAGAAAA+TGG + chr3_2:77939058-77939077 None:intergenic 20.0%
!! AAACAAAATCACTTACATTT+AGG + chr3_2:77939199-77939218 None:intergenic 20.0%
!!! AGTGATTTTGTTTCAATAAA+AGG - chr3_2:77939206-77939225 Msa0427250:intron 20.0%
!! CTCAATTCAATTCAAAATTT+GGG + chr3_2:77939807-77939826 None:intergenic 20.0%
!! TCTCAATTCAATTCAAAATT+TGG + chr3_2:77939808-77939827 None:intergenic 20.0%
!! TTAGAGTATGATTTAGTATT+CGG - chr3_2:77940207-77940226 Msa0427250:intron 20.0%
!!! CTTGGTTTTAATTGTATTTT+AGG + chr3_2:77941758-77941777 None:intergenic 20.0%
!!! TATAGTTTATTTCTACAATC+TGG - chr3_2:77941958-77941977 Msa0427250:intron 20.0%
!! CTATCAAAAGAAAATTAGAA+AGG + chr3_2:77942813-77942832 None:intergenic 20.0%
!! AATTATACTTAGAATCTACT+AGG + chr3_2:77942848-77942867 None:intergenic 20.0%
!! TATTATGGTTAACAGAAAAA+TGG + chr3_2:77942938-77942957 None:intergenic 20.0%
!!! TACGTGCTAAATTTTTTATA+GGG + chr3_2:77943139-77943158 None:intergenic 20.0%
!!! AATTTTTAGCTAACTTATTG+CGG - chr3_2:77943656-77943675 Msa0427250:intron 20.0%
!!! TACGTGTTGAAAAATTTTAT+AGG - chr3_2:77943781-77943800 Msa0427250:intron 20.0%
!!! ACGTGTTGAAAAATTTTATA+GGG - chr3_2:77943782-77943801 Msa0427250:intron 20.0%
!!! ATCTGTCAAAATATTTTATG+AGG - chr3_2:77943811-77943830 Msa0427250:intron 20.0%
!! ACGAAATTTGGTATATTTAT+AGG - chr3_2:77943841-77943860 Msa0427250:intron 20.0%
!! CGAAATTTGGTATATTTATA+GGG - chr3_2:77943842-77943861 Msa0427250:intron 20.0%
!!! ATAAATAAAGAGTACTTAAG+TGG - chr3_2:77944116-77944135 Msa0427250:intron 20.0%
!! ATATTCATATTCATATCAGT+GGG + chr3_2:77944431-77944450 None:intergenic 20.0%
!!! ATTTTTAATCAAATCAAGAG+AGG + chr3_2:77944456-77944475 None:intergenic 20.0%
!! AAAGTAAATTGAAAGATTCT+CGG - chr3_2:77944777-77944796 Msa0427250:intron 20.0%
!! TGTATATGTTAGGAATATTT+CGG + chr3_2:77945019-77945038 None:intergenic 20.0%
!! TAATAACATATTTGGTTGTA+CGG - chr3_2:77945197-77945216 Msa0427250:intron 20.0%
!! TCATGTTTAATACAAAATCA+TGG + chr3_2:77945311-77945330 None:intergenic 20.0%
!!! TTTAGTTTATTTGCTTTATC+AGG + chr3_2:77945391-77945410 None:intergenic 20.0%
!! CTAAAAATGAAATGAAATGA+AGG - chr3_2:77945406-77945425 Msa0427250:intron 20.0%
!!! GGAATTTTTTTTGATCAAAT+TGG + chr3_2:77945941-77945960 None:intergenic 20.0%
!! TCATTATACTATCATTCTAA+TGG + chr3_2:77946454-77946473 None:intergenic 20.0%
!!! ATTGCTATTTTTTTTGTTAG+GGG + chr3_2:77946698-77946717 None:intergenic 20.0%
!!! GCAACTTTTTGTAAATATAA+GGG - chr3_2:77946783-77946802 Msa0427250:CDS 20.0%
!!! CAACTTTTTGTAAATATAAG+GGG - chr3_2:77946784-77946803 Msa0427250:CDS 20.0%
!!! TTCCCATTTTTTTTAAAAAG+GGG - chr3_2:77946870-77946889 Msa0427250:CDS 20.0%
!!! TCGATTTTATAAAAATGACT+TGG - chr3_2:77947325-77947344 Msa0427250:CDS 20.0%
!! AATCATTATTCTAACTATAG+GGG - chr3_2:77947442-77947461 Msa0427250:CDS 20.0%
!! ATAAGTTAAGGATTTGTTTG+GGG + chr3_2:77936317-77936336 None:intergenic 25.0%
! TACTGGAACAAAATAAGTTA+AGG + chr3_2:77936329-77936348 None:intergenic 25.0%
!!! AGAAATCTACTTTGCTTTTA+AGG - chr3_2:77936888-77936907 Msa0427250:intron 25.0%
!!! ACCTGCTTTTAAGATTTTTA+AGG - chr3_2:77936937-77936956 Msa0427250:intron 25.0%
! TCCTTAAAAATCTTAAAAGC+AGG + chr3_2:77936941-77936960 None:intergenic 25.0%
! ACATAATCAGTTATAACTTG+TGG + chr3_2:77937169-77937188 None:intergenic 25.0%
! CAAGTTATAACTGATTATGT+CGG - chr3_2:77937169-77937188 Msa0427250:intron 25.0%
! GAATAATAATTAACTGTAGG+AGG + chr3_2:77937328-77937347 None:intergenic 25.0%
! GGTGAATAATAATTAACTGT+AGG + chr3_2:77937331-77937350 None:intergenic 25.0%
!!! TTCATCTTACTGTTGTTTTT+TGG - chr3_2:77937812-77937831 Msa0427250:intron 25.0%
! AACTCTTCACAGAAAAATAA+AGG + chr3_2:77938540-77938559 None:intergenic 25.0%
!!! CAAGCCATTTTAATGTTATT+TGG + chr3_2:77938614-77938633 None:intergenic 25.0%
! CAAATAACATTAAAATGGCT+TGG - chr3_2:77938612-77938631 Msa0427250:intron 25.0%
! AAATATACACTTCAAAGTTC+AGG + chr3_2:77938675-77938694 None:intergenic 25.0%
! TAATCCATCAAAGAAAAGAA+AGG + chr3_2:77938776-77938795 None:intergenic 25.0%
!! GACTTAATATTTGAAGTGAT+AGG + chr3_2:77938806-77938825 None:intergenic 25.0%
! ATCACTTCAAATATTAAGTC+AGG - chr3_2:77938806-77938825 Msa0427250:intron 25.0%
! AGTGCATAAATGATGAAATT+TGG + chr3_2:77938886-77938905 None:intergenic 25.0%
!!! ACTAGTTTTTGTTGTAGATA+GGG - chr3_2:77938903-77938922 Msa0427250:intron 25.0%
! TAAAAACAGGAGTTCAATAA+AGG + chr3_2:77938936-77938955 None:intergenic 25.0%
!!! CAGATTTTTAGCTTTAAGAA+CGG - chr3_2:77939144-77939163 Msa0427250:intron 25.0%
! AAAGGAAAAGCTAAAACAAA+TGG - chr3_2:77939224-77939243 Msa0427250:intron 25.0%
! AAGGAAAAGCTAAAACAAAT+GGG - chr3_2:77939225-77939244 Msa0427250:intron 25.0%
! CATTAATTCAAAATTTCCCA+TGG - chr3_2:77939250-77939269 Msa0427250:intron 25.0%
!! CACTATATTGTTTCTCAATA+GGG - chr3_2:77939365-77939384 Msa0427250:intron 25.0%
!! TTATTTCCTATGGTTTTTGA+GGG + chr3_2:77939574-77939593 None:intergenic 25.0%
!! TTTATTTCCTATGGTTTTTG+AGG + chr3_2:77939575-77939594 None:intergenic 25.0%
!!! GTCTTCTTTTTTATTTCCTA+TGG + chr3_2:77939584-77939603 None:intergenic 25.0%
! TTATCTCTGCATATTTGAAA+TGG - chr3_2:77939729-77939748 Msa0427250:intron 25.0%
! CTCATTTAGTTGTAAATTTC+AGG + chr3_2:77939931-77939950 None:intergenic 25.0%
! TAGAGTATGATTTAGTATTC+GGG - chr3_2:77940208-77940227 Msa0427250:intron 25.0%
! TTGTTGTAAAGAGTTTATAC+TGG - chr3_2:77940289-77940308 Msa0427250:intron 25.0%
! CAATGGTATAAAGATTAAAG+AGG + chr3_2:77940514-77940533 None:intergenic 25.0%
! CTCTTTAATCTTTATACCAT+TGG - chr3_2:77940512-77940531 Msa0427250:intron 25.0%
!! TTCTTTTCCATTCAATTCTT+GGG + chr3_2:77941329-77941348 None:intergenic 25.0%
!! ATTCTTTTCCATTCAATTCT+TGG + chr3_2:77941330-77941349 None:intergenic 25.0%
! AAGAATTGAATGGAAAAGAA+TGG - chr3_2:77941329-77941348 Msa0427250:intron 25.0%
!!! GAGAGAGTATTTGTATAAAT+AGG + chr3_2:77941517-77941536 None:intergenic 25.0%
! CTGTTAGGATATAGAATAAA+GGG + chr3_2:77941578-77941597 None:intergenic 25.0%
! TCTGTTAGGATATAGAATAA+AGG + chr3_2:77941579-77941598 None:intergenic 25.0%
! TATTTAACATGGTATCTGTT+AGG + chr3_2:77941593-77941612 None:intergenic 25.0%
! CTGTTAGGATATATTTAACA+TGG + chr3_2:77941604-77941623 None:intergenic 25.0%
! TTCAGATTTGATTGTATTCT+TGG + chr3_2:77941776-77941795 None:intergenic 25.0%
! TATTCAAACACCTAAATATC+AGG - chr3_2:77941838-77941857 Msa0427250:intron 25.0%
!!! TACACATTGCTATTTAAGTT+AGG + chr3_2:77942874-77942893 None:intergenic 25.0%
!! AAACATGTTTAACTTTGTCT+AGG + chr3_2:77943031-77943050 None:intergenic 25.0%
!!! AAATCTGTCACTTTTTTTTG+AGG + chr3_2:77943112-77943131 None:intergenic 25.0%
!! CAAAAAAAAGTGACAGATTT+TGG - chr3_2:77943112-77943131 Msa0427250:intron 25.0%
!!! CTACGTGCTAAATTTTTTAT+AGG + chr3_2:77943140-77943159 None:intergenic 25.0%
!!! AATTTTGAGCTACTTTTTTG+CGG - chr3_2:77943366-77943385 Msa0427250:intron 25.0%
! ATGAATAAGGTCAAATTGAT+CGG + chr3_2:77944010-77944029 None:intergenic 25.0%
! TGCATAATATATGCAAGTTT+GGG + chr3_2:77944184-77944203 None:intergenic 25.0%
! ATGCATAATATATGCAAGTT+TGG + chr3_2:77944185-77944204 None:intergenic 25.0%
! CATATTCATATTCATATCAG+TGG + chr3_2:77944432-77944451 None:intergenic 25.0%
!! CTTATGTGATAAAAAAGTGT+GGG + chr3_2:77944748-77944767 None:intergenic 25.0%
! TCTTATGTGATAAAAAAGTG+TGG + chr3_2:77944749-77944768 None:intergenic 25.0%
! AAGTAAATTGAAAGATTCTC+GGG - chr3_2:77944778-77944797 Msa0427250:intron 25.0%
! GTATATGTTAGGAATATTTC+GGG + chr3_2:77945018-77945037 None:intergenic 25.0%
!! CCTGATATTTTGTATATGTT+AGG + chr3_2:77945029-77945048 None:intergenic 25.0%
! CCTAACATATACAAAATATC+AGG - chr3_2:77945026-77945045 Msa0427250:intron 25.0%
! AACTCACGTAATAACATATT+TGG - chr3_2:77945189-77945208 Msa0427250:intron 25.0%
! TGGAGAAAAAATACAAAGAA+GGG - chr3_2:77945560-77945579 Msa0427250:intron 25.0%
! ATTATATAAAAGCGACATAG+TGG + chr3_2:77945820-77945839 None:intergenic 25.0%
! AATCAGATTGAGATCAAATT+TGG - chr3_2:77945902-77945921 Msa0427250:CDS 25.0%
! ATAGATCAAAATCATCTGAT+TGG - chr3_2:77946301-77946320 Msa0427250:CDS 25.0%
!! TGAAACCATGTATTTTTCTA+CGG - chr3_2:77946414-77946433 Msa0427250:CDS 25.0%
!! TACTATCATTCTAATGGATA+TGG + chr3_2:77946448-77946467 None:intergenic 25.0%
!! TTTTTATAGAAGTCCTAGAT+AGG - chr3_2:77946543-77946562 Msa0427250:CDS 25.0%
!!! CTTTTAAAAAGTTGCGATTT+TGG - chr3_2:77946671-77946690 Msa0427250:CDS 25.0%
!!! TTGCTATTTTTTTTGTTAGG+GGG + chr3_2:77946697-77946716 None:intergenic 25.0%
!! AATAGCAATTTTTGCTCTAA+AGG - chr3_2:77946709-77946728 Msa0427250:CDS 25.0%
! TTTACAAAAAGTTGCGATTA+TGG + chr3_2:77946778-77946797 None:intergenic 25.0%
!! CGCAACTTTTTGTAAATATA+AGG - chr3_2:77946782-77946801 Msa0427250:CDS 25.0%
!!! TTCTAGGAAAATATGCTTTT+TGG + chr3_2:77946810-77946829 None:intergenic 25.0%
!!! AAAAAGCATATTTTCCTAGA+AGG - chr3_2:77946809-77946828 Msa0427250:CDS 25.0%
!!! TCCCATTTTTTTTAAAAAGG+GGG - chr3_2:77946871-77946890 Msa0427250:CDS 25.0%
!!! ACCCCCTTTTTAAAAAAAAT+GGG + chr3_2:77946875-77946894 None:intergenic 25.0%
! AAGCATACACTATATAAGTT+TGG + chr3_2:77946945-77946964 None:intergenic 25.0%
! AAACTTATATAGTGTATGCT+TGG - chr3_2:77946944-77946963 Msa0427250:CDS 25.0%
CTCTTGATTCTATGATTATG+TGG + chr3_2:77936463-77936482 None:intergenic 30.0%
AAAACAACATCAACCACAAT+TGG + chr3_2:77936653-77936672 None:intergenic 30.0%
!! AATTGTGGTTGATGTTGTTT+TGG - chr3_2:77936652-77936671 Msa0427250:intron 30.0%
AAACCTTAATTTCTCTCCAA+AGG - chr3_2:77936682-77936701 Msa0427250:intron 30.0%
TTTACAAAAGATCGAACCTT+TGG + chr3_2:77936701-77936720 None:intergenic 30.0%
ATGAGAAGATTGTTGAAAGA+TGG - chr3_2:77936765-77936784 Msa0427250:intron 30.0%
! GCTTCTTGTTTAGTAGTAAA+TGG + chr3_2:77937028-77937047 None:intergenic 30.0%
GAAATTCTAATAGGAGTAGA+CGG + chr3_2:77937661-77937680 None:intergenic 30.0%
CTACTCCTATTAGAATTTCA+AGG - chr3_2:77937662-77937681 Msa0427250:intron 30.0%
! TCTGCATAGATGTTTTCTAT+TGG - chr3_2:77937836-77937855 Msa0427250:intron 30.0%
!! GATGAGTCTAAAAAGTATTC+TGG - chr3_2:77937863-77937882 Msa0427250:intron 30.0%
ATTTCGTCACTAAAATTCGT+AGG - chr3_2:77938029-77938048 Msa0427250:intron 30.0%
TTTCGTCACTAAAATTCGTA+GGG - chr3_2:77938030-77938049 Msa0427250:intron 30.0%
GCATCAACTACTTATATCAA+AGG + chr3_2:77938082-77938101 None:intergenic 30.0%
ATCTAGCAATAGATCCATAA+AGG + chr3_2:77938213-77938232 None:intergenic 30.0%
ATGGATCTATTGCTAGATTA+TGG - chr3_2:77938215-77938234 Msa0427250:intron 30.0%
TAAATTAGCAACCCTTTGTT+TGG - chr3_2:77938251-77938270 Msa0427250:intron 30.0%
CGAAAACAATACCAAACAAA+GGG + chr3_2:77938265-77938284 None:intergenic 30.0%
!! CCTTTGTTTGGTATTGTTTT+CGG - chr3_2:77938263-77938282 Msa0427250:intron 30.0%
TACCAGCATAACAACTAATA+CGG + chr3_2:77938381-77938400 None:intergenic 30.0%
! TGGTATTTTCTCCTTTAGTA+CGG - chr3_2:77938396-77938415 Msa0427250:intron 30.0%
TTATGAAAATCAGAATGCAG+TGG + chr3_2:77938472-77938491 None:intergenic 30.0%
!! CTTTGAAGTGTATATTTCGT+TGG - chr3_2:77938678-77938697 Msa0427250:intron 30.0%
! TTTGCCTTTCTTTTCTTTGA+TGG - chr3_2:77938769-77938788 Msa0427250:intron 30.0%
!!! TTTTCTTTGATGGATTACTG+TGG - chr3_2:77938779-77938798 Msa0427250:intron 30.0%
TCTCTCTTCTACTAATTCTT+TGG - chr3_2:77938856-77938875 Msa0427250:intron 30.0%
!!! CACTAGTTTTTGTTGTAGAT+AGG - chr3_2:77938902-77938921 Msa0427250:intron 30.0%
! ACACTATTTCTTTGAAGAAG+TGG - chr3_2:77939085-77939104 Msa0427250:intron 30.0%
! GCACTATATTGTTTCTCAAT+AGG - chr3_2:77939364-77939383 Msa0427250:intron 30.0%
!!! AAGTTGATAGTAGTTTTGAG+TGG - chr3_2:77939430-77939449 Msa0427250:intron 30.0%
AACAAATCCATCACATAGAT+GGG + chr3_2:77939484-77939503 None:intergenic 30.0%
AAACAAATCCATCACATAGA+TGG + chr3_2:77939485-77939504 None:intergenic 30.0%
TTTCATTAGTGAGAAATGAG+TGG - chr3_2:77939520-77939539 Msa0427250:intron 30.0%
! GTTCATGTCATAGTTTTTGA+AGG + chr3_2:77939609-77939628 None:intergenic 30.0%
GTTGTTAGTATATGATTAGG+AGG + chr3_2:77939638-77939657 None:intergenic 30.0%
GGAGTTGTTAGTATATGATT+AGG + chr3_2:77939641-77939660 None:intergenic 30.0%
! TTTTCTACTATAGCTGGTAT+AGG + chr3_2:77940073-77940092 None:intergenic 30.0%
TATACCAGCTATAGTAGAAA+AGG - chr3_2:77940072-77940091 Msa0427250:intron 30.0%
! CTGTTTTATGCATATAGTAC+TGG + chr3_2:77940133-77940152 None:intergenic 30.0%
GAATAATGTCATGTGATTTG+TGG - chr3_2:77940157-77940176 Msa0427250:intron 30.0%
CTTCAAAATCAAATGATCCA+CGG - chr3_2:77940180-77940199 Msa0427250:intron 30.0%
AAAAAGAAGCCAAATTGAGA+GGG + chr3_2:77940356-77940375 None:intergenic 30.0%
!!! TTTGGCTTCTTTTTCAAGTT+TGG - chr3_2:77940362-77940381 Msa0427250:intron 30.0%
!!! TTGGCTTCTTTTTCAAGTTT+GGG - chr3_2:77940363-77940382 Msa0427250:intron 30.0%
! TTTTCCATGAAATTTTGAGC+AGG - chr3_2:77940388-77940407 Msa0427250:intron 30.0%
! TTCTCTTTTCTTGAATCTAG+TGG - chr3_2:77940688-77940707 Msa0427250:intron 30.0%
GACATCATTGTCTTCTTATT+TGG - chr3_2:77940810-77940829 Msa0427250:intron 30.0%
GACATATTTATTCCTCCAAA+CGG + chr3_2:77940927-77940946 None:intergenic 30.0%
GAATAAATATGTCCTTCGAA+TGG - chr3_2:77940934-77940953 Msa0427250:intron 30.0%
!!! CCAGTTGAAAACTAGTTTTT+CGG - chr3_2:77941055-77941074 Msa0427250:intron 30.0%
AATGACAAAGACTGTTGAAT+GGG + chr3_2:77941087-77941106 None:intergenic 30.0%
TAATGACAAAGACTGTTGAA+TGG + chr3_2:77941088-77941107 None:intergenic 30.0%
ACGGAATATTGTAAACTTTG+TGG + chr3_2:77941450-77941469 None:intergenic 30.0%
GGTACAACTAAAATATAGTC+AGG + chr3_2:77941882-77941901 None:intergenic 30.0%
! AATTACCAGTTTTCTGCTAT+AGG + chr3_2:77941903-77941922 None:intergenic 30.0%
!! TTATTGCTCTTCAAGTTTTC+AGG + chr3_2:77942256-77942275 None:intergenic 30.0%
! GAAATTTTGTCAAACTGACT+AGG + chr3_2:77942459-77942478 None:intergenic 30.0%
TGACAAAATTTCAGTGACAT+TGG - chr3_2:77942467-77942486 Msa0427250:intron 30.0%
GACAAAATTTCAGTGACATT+GGG - chr3_2:77942468-77942487 Msa0427250:intron 30.0%
CAAAGAACTTTGTGAATGTT+TGG + chr3_2:77942572-77942591 None:intergenic 30.0%
!! CTGAAAGTGCTAATTGAAAT+TGG - chr3_2:77942695-77942714 Msa0427250:intron 30.0%
! TGCAAAGTAAGTTGCTATTA+TGG + chr3_2:77942953-77942972 None:intergenic 30.0%
AATGAGGATTTGGAAGAATA+TGG + chr3_2:77942982-77943001 None:intergenic 30.0%
AATTGAACCAGGAATAAATG+AGG + chr3_2:77942998-77943017 None:intergenic 30.0%
TGAGGACTAAAAACGAAATT+TGG - chr3_2:77943829-77943848 Msa0427250:intron 30.0%
TTTAATCTTGACATGGACAA+AGG - chr3_2:77943901-77943920 Msa0427250:intron 30.0%
TTAATCTTGACATGGACAAA+GGG - chr3_2:77943902-77943921 Msa0427250:intron 30.0%
! GGTCTTAATAATCTAGAGTT+CGG - chr3_2:77943923-77943942 Msa0427250:intron 30.0%
! TTCGCAACTGATACAATTTT+GGG + chr3_2:77943971-77943990 None:intergenic 30.0%
! ATTCGCAACTGATACAATTT+TGG + chr3_2:77943972-77943991 None:intergenic 30.0%
GAGTGATTAGTGAATGAATA+AGG + chr3_2:77944023-77944042 None:intergenic 30.0%
!! AAAAGAGCGTATGTTTTTGT+TGG - chr3_2:77944139-77944158 Msa0427250:intron 30.0%
GCATAATATATGCAAGTTTG+GGG + chr3_2:77944183-77944202 None:intergenic 30.0%
!! AAATGTTGATTCCTATATCC+AGG - chr3_2:77944309-77944328 Msa0427250:intron 30.0%
! TAAAAAAGTGTGGGAAATCA+AGG + chr3_2:77944739-77944758 None:intergenic 30.0%
! GGTAATCTGAAATTTGATCA+GGG + chr3_2:77944820-77944839 None:intergenic 30.0%
! TGGTAATCTGAAATTTGATC+AGG + chr3_2:77944821-77944840 None:intergenic 30.0%
! TCATGTGTATGAGATTAGTT+AGG - chr3_2:77944853-77944872 Msa0427250:intron 30.0%
!!! AGTCAATTATTTTAGTCCGA+AGG - chr3_2:77945159-77945178 Msa0427250:intron 30.0%
ATTTGATACGTTGTGTTTGA+AGG + chr3_2:77945336-77945355 None:intergenic 30.0%
! CAACGTATCAAATTTTCTTG+CGG - chr3_2:77945343-77945362 Msa0427250:intron 30.0%
GTGGAGAAAAAATACAAAGA+AGG - chr3_2:77945559-77945578 Msa0427250:intron 30.0%
GGAGAAAAAATACAAAGAAG+GGG - chr3_2:77945561-77945580 Msa0427250:intron 30.0%
AAATACAAAGAAGGGGAAAT+CGG - chr3_2:77945568-77945587 Msa0427250:intron 30.0%
TTGTCTATCTAGAAGATGAA+GGG + chr3_2:77945706-77945725 None:intergenic 30.0%
!!! TGTACTTTTTGGCTTTAACA+CGG + chr3_2:77945881-77945900 None:intergenic 30.0%
! CAATCTGATTCTGTACTTTT+TGG + chr3_2:77945892-77945911 None:intergenic 30.0%
TTGAAAATGCAACATGTTAG+TGG + chr3_2:77946126-77946145 None:intergenic 30.0%
GGACGATCAATATTACATAT+TGG + chr3_2:77946360-77946379 None:intergenic 30.0%
CACAAGAATTGATATCAGAT+CGG + chr3_2:77946381-77946400 None:intergenic 30.0%
GAAATAAGATTGAACAACGA+CGG - chr3_2:77946472-77946491 Msa0427250:CDS 30.0%
TGAATTGATTGAAGTGCATT+TGG - chr3_2:77946503-77946522 Msa0427250:CDS 30.0%
! TCTAAACTTTTCTCCTATCT+AGG + chr3_2:77946559-77946578 None:intergenic 30.0%
AAAGTGATCATCCATGTTTA+GGG + chr3_2:77946851-77946870 None:intergenic 30.0%
AAAAGTGATCATCCATGTTT+AGG + chr3_2:77946852-77946871 None:intergenic 30.0%
!! GACCCCCTTTTTAAAAAAAA+TGG + chr3_2:77946876-77946895 None:intergenic 30.0%
ACATGTTAGTTATTTACGAG+AGG + chr3_2:77947207-77947226 None:intergenic 30.0%
ACTTGAACATCATTCTTAAC+AGG + chr3_2:77947530-77947549 None:intergenic 30.0%
CAAGAGAAATCCTTTACTAT+GGG - chr3_2:77947577-77947596 Msa0427250:five_prime_UTR 30.0%
CTTTCAGTCCAATCTAAAAG+AGG + chr3_2:77936278-77936297 None:intergenic 35.0%
! TGTTCTGATATGTTGGTTAC+TGG + chr3_2:77936346-77936365 None:intergenic 35.0%
TCAGTTCTGTTCTGATATGT+TGG + chr3_2:77936353-77936372 None:intergenic 35.0%
CATATCAGAACAGAACTGAA+CGG - chr3_2:77936354-77936373 Msa0427250:intron 35.0%
GAAGATGAAGAAGTTGAAGA+TGG + chr3_2:77936527-77936546 None:intergenic 35.0%
AGATTGAACCATTTGTCTCT+GGG + chr3_2:77936566-77936585 None:intergenic 35.0%
TAGATTGAACCATTTGTCTC+TGG + chr3_2:77936567-77936586 None:intergenic 35.0%
CAATTGGCTGAAGATTATTG+TGG + chr3_2:77936637-77936656 None:intergenic 35.0%
CAATAATCTTCAGCCAATTG+TGG - chr3_2:77936637-77936656 Msa0427250:intron 35.0%
! GAACCTTTGGAGAGAAATTA+AGG + chr3_2:77936688-77936707 None:intergenic 35.0%
! AGAAACCCCTTTGAAGAATT+AGG - chr3_2:77936725-77936744 Msa0427250:intron 35.0%
GAACTCACATCAGAAACATA+CGG + chr3_2:77937124-77937143 None:intergenic 35.0%
! GTATGTTTCTGATGTGAGTT+CGG - chr3_2:77937123-77937142 Msa0427250:intron 35.0%
! GTTATAACTTGTGGAGACAA+AGG + chr3_2:77937160-77937179 None:intergenic 35.0%
AAAGACATTTCACTTGGATG+AGG + chr3_2:77937433-77937452 None:intergenic 35.0%
TGAAGCAAAGACATTTCACT+TGG + chr3_2:77937439-77937458 None:intergenic 35.0%
! TAGATAGGTGATGATGAAGA+AGG + chr3_2:77937523-77937542 None:intergenic 35.0%
CATCACCTATCTATAGTTTG+CGG - chr3_2:77937530-77937549 Msa0427250:intron 35.0%
AATGACCGCAAACTATAGAT+AGG + chr3_2:77937538-77937557 None:intergenic 35.0%
GAATTAGCAACTTCAGCATT+AGG + chr3_2:77937607-77937626 None:intergenic 35.0%
GTGCACCTTGAAATTCTAAT+AGG + chr3_2:77937670-77937689 None:intergenic 35.0%
TTCGTCACTAAAATTCGTAG+GGG - chr3_2:77938031-77938050 Msa0427250:intron 35.0%
GCTTCAGTTCCTTAACAATA+TGG - chr3_2:77938100-77938119 Msa0427250:intron 35.0%
GCAGCTATACCATATTGTTA+AGG + chr3_2:77938112-77938131 None:intergenic 35.0%
! CAGGGTCTCTTTTATCTATA+TGG + chr3_2:77938145-77938164 None:intergenic 35.0%
ATAAAGGATCCATCCCTTAA+TGG + chr3_2:77938197-77938216 None:intergenic 35.0%
ATTAAGGGATGGATCCTTTA+TGG - chr3_2:77938196-77938215 Msa0427250:intron 35.0%
CCGAAAACAATACCAAACAA+AGG + chr3_2:77938266-77938285 None:intergenic 35.0%
! TTTGGTATTGTTTTCGGTGA+GGG - chr3_2:77938269-77938288 Msa0427250:intron 35.0%
TACCGTATTAGTTGTTATGC+TGG - chr3_2:77938376-77938395 Msa0427250:intron 35.0%
ATTAGACTTCACCTTATCAG+TGG - chr3_2:77938494-77938513 Msa0427250:intron 35.0%
TCAAATCTTCACCACTGATA+AGG + chr3_2:77938508-77938527 None:intergenic 35.0%
! TTTTTAATCAACCAGTCTGC+TGG - chr3_2:77938745-77938764 Msa0427250:intron 35.0%
GAATTAGTAGAAGAGAGAAC+AGG + chr3_2:77938854-77938873 None:intergenic 35.0%
!!! TCCTGTTTTTACACACCAAT+GGG - chr3_2:77938945-77938964 Msa0427250:intron 35.0%
TTTCCCATGGTCACTAAATA+AGG - chr3_2:77939263-77939282 Msa0427250:intron 35.0%
! ACACCTTATTTAGTGACCAT+GGG + chr3_2:77939269-77939288 None:intergenic 35.0%
! AACACCTTATTTAGTGACCA+TGG + chr3_2:77939270-77939289 None:intergenic 35.0%
!! GATTTTTGCTTGGTTTGAGA+AGG + chr3_2:77939403-77939422 None:intergenic 35.0%
! CTTTGCACTTGATTTTTGCT+TGG + chr3_2:77939413-77939432 None:intergenic 35.0%
!!! TGATAGTAGTTTTGAGTGGA+TGG - chr3_2:77939434-77939453 Msa0427250:intron 35.0%
CTTAAATCCCATCTATGTGA+TGG - chr3_2:77939474-77939493 Msa0427250:intron 35.0%
GAGTGGAAAATACATCTTAG+AGG - chr3_2:77939537-77939556 Msa0427250:intron 35.0%
TGGAAAATACATCTTAGAGG+AGG - chr3_2:77939540-77939559 Msa0427250:intron 35.0%
!! AAACTGCTTTGAAACAATCG+TGG - chr3_2:77939752-77939771 Msa0427250:intron 35.0%
!! AACTGCTTTGAAACAATCGT+GGG - chr3_2:77939753-77939772 Msa0427250:intron 35.0%
! TCTCTATCTCTTTGAAGATG+AGG + chr3_2:77939862-77939881 None:intergenic 35.0%
CAAAAATAGCCAAACAGCTA+AGG - chr3_2:77939952-77939971 Msa0427250:intron 35.0%
GGTCTTGGGTTATTTACTTA+TGG - chr3_2:77939973-77939992 Msa0427250:intron 35.0%
AGCAGATTTCATGATAAACG+TGG - chr3_2:77939998-77940017 Msa0427250:intron 35.0%
AACATGAAGAACATTGTGGA+GGG - chr3_2:77940021-77940040 Msa0427250:intron 35.0%
! GTTACCTTTTCTACTATAGC+TGG + chr3_2:77940079-77940098 None:intergenic 35.0%
GAAAAAGAAGCCAAATTGAG+AGG + chr3_2:77940357-77940376 None:intergenic 35.0%
!!! TGGCTTCTTTTTCAAGTTTG+GGG - chr3_2:77940364-77940383 Msa0427250:intron 35.0%
CAAACCTGCTCAAAATTTCA+TGG + chr3_2:77940395-77940414 None:intergenic 35.0%
! ACCTTGGTGTGATCAATATA+CGG + chr3_2:77940433-77940452 None:intergenic 35.0%
ATTATGCTACGACATTCCAA+TGG + chr3_2:77940531-77940550 None:intergenic 35.0%
AAAATCTGCGCTGTCAATAT+GGG + chr3_2:77940594-77940613 None:intergenic 35.0%
GATTGAGTCTACATGTTTCT+AGG + chr3_2:77940662-77940681 None:intergenic 35.0%
TTGAATCTAGTGGCATCATT+GGG - chr3_2:77940698-77940717 Msa0427250:intron 35.0%
TAATGGAATCTTCCATTCGA+AGG + chr3_2:77940949-77940968 None:intergenic 35.0%
GAAAGTCACTAATTATTGCG+TGG + chr3_2:77940982-77941001 None:intergenic 35.0%
TCTCTACAAAAATGGGAGTT+AGG + chr3_2:77941004-77941023 None:intergenic 35.0%
!! TAACTCCCATTTTTGTAGAG+AGG - chr3_2:77941003-77941022 Msa0427250:intron 35.0%
!! AACTCCCATTTTTGTAGAGA+GGG - chr3_2:77941004-77941023 Msa0427250:intron 35.0%
!!! CCGAAAAACTAGTTTTCAAC+TGG + chr3_2:77941058-77941077 None:intergenic 35.0%
TATAGACAGAGGATCAGATA+CGG - chr3_2:77941140-77941159 Msa0427250:intron 35.0%
!! CTTGTCCTCGTATTTTTATG+TGG - chr3_2:77941224-77941243 Msa0427250:intron 35.0%
TAGCTCCACATAAAAATACG+AGG + chr3_2:77941232-77941251 None:intergenic 35.0%
TTAGGAACCCAAGAATTGAA+TGG - chr3_2:77941319-77941338 Msa0427250:intron 35.0%
AGTAGTTTCTCAACTGTGAA+GGG + chr3_2:77941423-77941442 None:intergenic 35.0%
!! CCTTTGTTCTAAGATCATCA+CGG + chr3_2:77941469-77941488 None:intergenic 35.0%
AACATCACATGGTATCTGTT+AGG + chr3_2:77941619-77941638 None:intergenic 35.0%
AACAGATACCATGTGATGTT+AGG - chr3_2:77941619-77941638 Msa0427250:CDS 35.0%
ACAGATACCATGTGATGTTA+GGG - chr3_2:77941620-77941639 Msa0427250:CDS 35.0%
ATGTTGACAGCCTGATATTT+AGG + chr3_2:77941851-77941870 None:intergenic 35.0%
TTGTACCTATAGCAGAAAAC+TGG - chr3_2:77941895-77941914 Msa0427250:intron 35.0%
TTTCCAATCAGAAAGTCTCA+AGG - chr3_2:77942136-77942155 Msa0427250:intron 35.0%
GAAAACAACAAGTGATGCAT+TGG - chr3_2:77942342-77942361 Msa0427250:intron 35.0%
TTATTACTTATGCCACGTGA+TGG - chr3_2:77942397-77942416 Msa0427250:intron 35.0%
! TTTGTTGTATCTCCAAAGTG+TGG - chr3_2:77942493-77942512 Msa0427250:intron 35.0%
AGGATTTGGAAGAATATGGT+AGG + chr3_2:77942978-77942997 None:intergenic 35.0%
TCCAAATCCTCATTTATTCC+TGG - chr3_2:77942988-77943007 Msa0427250:intron 35.0%
ACCAGGAATAAATGAGGATT+TGG + chr3_2:77942992-77943011 None:intergenic 35.0%
GATAAGATTTGCCTGGATAT+AGG + chr3_2:77944323-77944342 None:intergenic 35.0%
CAGTGGGAAAACAATAAGAT+TGG + chr3_2:77944415-77944434 None:intergenic 35.0%
TTGGATATCACTTATGGTGA+TGG + chr3_2:77944544-77944563 None:intergenic 35.0%
ACCTGGATGTATATCTTGAT+GGG + chr3_2:77944567-77944586 None:intergenic 35.0%
TACCTGGATGTATATCTTGA+TGG + chr3_2:77944568-77944587 None:intergenic 35.0%
CACATGTTGGATATCTTGTT+GGG + chr3_2:77944657-77944676 None:intergenic 35.0%
TCACATGTTGGATATCTTGT+TGG + chr3_2:77944658-77944677 None:intergenic 35.0%
CTCATAGATGAATCACATGT+TGG + chr3_2:77944670-77944689 None:intergenic 35.0%
ACACATGATGAAAGAAACTC+TGG + chr3_2:77944841-77944860 None:intergenic 35.0%
TATGTTAGACCATGTACTCA+AGG - chr3_2:77944909-77944928 Msa0427250:intron 35.0%
ATGTTAGACCATGTACTCAA+GGG - chr3_2:77944910-77944929 Msa0427250:intron 35.0%
! TTTGTTATCGACATGCACTA+AGG - chr3_2:77944973-77944992 Msa0427250:intron 35.0%
! CGGACTAAAATAATTGACTC+TGG + chr3_2:77945158-77945177 None:intergenic 35.0%
CTTGTCTATCTAGAAGATGA+AGG + chr3_2:77945707-77945726 None:intergenic 35.0%
TGAAATCAAAGCGGTTTCTT+GGG + chr3_2:77945796-77945815 None:intergenic 35.0%
ATGAAATCAAAGCGGTTTCT+TGG + chr3_2:77945797-77945816 None:intergenic 35.0%
!! CATAGTGGATGAAATCAAAG+CGG + chr3_2:77945805-77945824 None:intergenic 35.0%
!!! GTACTTTTTGGCTTTAACAC+GGG + chr3_2:77945880-77945899 None:intergenic 35.0%
AAAGCAGCACTGTTCATTAA+TGG + chr3_2:77945962-77945981 None:intergenic 35.0%
TGTTCCTATATAGTGTCCAA+GGG - chr3_2:77945986-77946005 Msa0427250:CDS 35.0%
TATCTTCACATTTGTGCAAG+TGG + chr3_2:77946024-77946043 None:intergenic 35.0%
GAAGACGTTTGTATTCAAGT+TGG + chr3_2:77946086-77946105 None:intergenic 35.0%
! ATATGCTCTTTTGACCTTCT+AGG + chr3_2:77946826-77946845 None:intergenic 35.0%
AGAGCATATTTCCCTAAACA+TGG - chr3_2:77946837-77946856 Msa0427250:CDS 35.0%
!!! ATCGCTACTTTTCCAAACTT+AGG - chr3_2:77946899-77946918 Msa0427250:CDS 35.0%
!!! TCGCTACTTTTCCAAACTTA+GGG - chr3_2:77946900-77946919 Msa0427250:CDS 35.0%
TCAAAATCCACTCTTGTCAT+CGG + chr3_2:77946974-77946993 None:intergenic 35.0%
CTTTAATTATCACGCACATG+TGG + chr3_2:77947012-77947031 None:intergenic 35.0%
ACTAACATGTGCAACTAACA+TGG - chr3_2:77947217-77947236 Msa0427250:CDS 35.0%
GGCAAAGTTTATGCTCTTAA+TGG - chr3_2:77947238-77947257 Msa0427250:CDS 35.0%
GCAAGAGAAATCCTTTACTA+TGG - chr3_2:77947576-77947595 Msa0427250:five_prime_UTR 35.0%
AAATCCTTTACTATGGGCAT+TGG - chr3_2:77947583-77947602 Msa0427250:five_prime_UTR 35.0%
AGTTGAAGATGGTGAAGAGA+GGG + chr3_2:77936516-77936535 None:intergenic 40.0%
AAGTTGAAGATGGTGAAGAG+AGG + chr3_2:77936517-77936536 None:intergenic 40.0%
! AACCCCTTTGAAGAATTAGG+AGG - chr3_2:77936728-77936747 Msa0427250:intron 40.0%
CACCTCCTAATTCTTCAAAG+GGG + chr3_2:77936733-77936752 None:intergenic 40.0%
CCACCTCCTAATTCTTCAAA+GGG + chr3_2:77936734-77936753 None:intergenic 40.0%
! CCTTTGAAGAATTAGGAGGT+GGG - chr3_2:77936732-77936751 Msa0427250:intron 40.0%
TCTTGTAGTGTTTGCAGTGT+TGG + chr3_2:77936834-77936853 None:intergenic 40.0%
ACACTGCAAACACTACAAGA+AGG - chr3_2:77936834-77936853 Msa0427250:intron 40.0%
TAAGTTTGTGTTCACTCCTG+TGG - chr3_2:77937057-77937076 Msa0427250:intron 40.0%
ACTCCTGTGGATACTAATTC+TGG - chr3_2:77937070-77937089 Msa0427250:intron 40.0%
CTACCAGAATTAGTATCCAC+AGG + chr3_2:77937076-77937095 None:intergenic 40.0%
CTGTGGATACTAATTCTGGT+AGG - chr3_2:77937074-77937093 Msa0427250:intron 40.0%
TTCTGGTAGGCTGTGTTTAT+CGG - chr3_2:77937087-77937106 Msa0427250:intron 40.0%
ATTCTAACAACAGGAAGCGA+CGG + chr3_2:77937226-77937245 None:intergenic 40.0%
TGTGATGGCATTCTAACAAC+AGG + chr3_2:77937235-77937254 None:intergenic 40.0%
GTTGTTAGAATGCCATCACA+TGG - chr3_2:77937235-77937254 Msa0427250:intron 40.0%
CAACTATGTCTCCTCGAAAA+TGG + chr3_2:77937280-77937299 None:intergenic 40.0%
!! CATTTTCGAGGAGACATAGT+TGG - chr3_2:77937278-77937297 Msa0427250:intron 40.0%
TTCACCTTCACCTACACATT+CGG - chr3_2:77937345-77937364 Msa0427250:intron 40.0%
ACATTCGGAATCACACACAT+TGG - chr3_2:77937360-77937379 Msa0427250:intron 40.0%
! GTTTCTAATGCTAGCTCTCA+AGG - chr3_2:77937382-77937401 Msa0427250:intron 40.0%
TCAGCATTAGGTATGTTGAC+AGG + chr3_2:77937595-77937614 None:intergenic 40.0%
ATTCTAATAGGAGTAGACGG+CGG + chr3_2:77937658-77937677 None:intergenic 40.0%
ATCATGCATTATGCCTGAGA+AGG - chr3_2:77937723-77937742 Msa0427250:intron 40.0%
ATGATGCAACATACCTTCTC+AGG + chr3_2:77937739-77937758 None:intergenic 40.0%
! CACCACAGATTTCATTTTCC+AGG - chr3_2:77937909-77937928 Msa0427250:intron 40.0%
CTCCTGGAAAATGAAATCTG+TGG + chr3_2:77937914-77937933 None:intergenic 40.0%
! TTTCACATGTCCTTTTGACG+TGG - chr3_2:77937973-77937992 Msa0427250:intron 40.0%
GCAAGAGCTTTGCAATATCA+GGG + chr3_2:77938163-77938182 None:intergenic 40.0%
ATATTGCAAAGCTCTTGCCA+TGG - chr3_2:77938165-77938184 Msa0427250:intron 40.0%
! GTTTGGTATTGTTTTCGGTG+AGG - chr3_2:77938268-77938287 Msa0427250:intron 40.0%
!! GTTTTCGGTGAGGGTATATA+AGG - chr3_2:77938278-77938297 Msa0427250:intron 40.0%
!! CACACTTGAAGTTGATGTCA+TGG - chr3_2:77938321-77938340 Msa0427250:intron 40.0%
CTGAAAGAGTTAAAAGACCC+GGG + chr3_2:77938428-77938447 None:intergenic 40.0%
GCTGAAAGAGTTAAAAGACC+CGG + chr3_2:77938429-77938448 None:intergenic 40.0%
AGTAGAAGAGAGAACAGGTT+GGG + chr3_2:77938849-77938868 None:intergenic 40.0%
TAGTAGAAGAGAGAACAGGT+TGG + chr3_2:77938850-77938869 None:intergenic 40.0%
!!! CTCCTGTTTTTACACACCAA+TGG - chr3_2:77938944-77938963 Msa0427250:intron 40.0%
TCCCATTGGTGTGTAAAAAC+AGG + chr3_2:77938949-77938968 None:intergenic 40.0%
GCTTAAACATATGCTCCCAT+TGG + chr3_2:77938963-77938982 None:intergenic 40.0%
!!! TGAGTGGATGGTTTTGTTCA+TGG - chr3_2:77939446-77939465 Msa0427250:intron 40.0%
GAAACAATCGTGGGTGAAAT+TGG - chr3_2:77939762-77939781 Msa0427250:intron 40.0%
! TATCTCTTTGAAGATGAGGC+TGG + chr3_2:77939858-77939877 None:intergenic 40.0%
AATTTCAGGAGTTGAGTTCG+AGG + chr3_2:77939917-77939936 None:intergenic 40.0%
GTGGAACATGAAGAACATTG+TGG - chr3_2:77940017-77940036 Msa0427250:intron 40.0%
GAACATGAAGAACATTGTGG+AGG - chr3_2:77940020-77940039 Msa0427250:intron 40.0%
!! AATCATACTCTAAAGCTCCG+TGG + chr3_2:77940200-77940219 None:intergenic 40.0%
!! AGATAGCTTTTTGAGCTCTG+AGG - chr3_2:77940247-77940266 Msa0427250:intron 40.0%
!! GATAGCTTTTTGAGCTCTGA+GGG - chr3_2:77940248-77940267 Msa0427250:intron 40.0%
! TTTTCCAAGCTGCAAGTGAA+AGG + chr3_2:77940328-77940347 None:intergenic 40.0%
!!! GGCTTCTTTTTCAAGTTTGG+GGG - chr3_2:77940365-77940384 Msa0427250:intron 40.0%
ACCGTATATTGATCACACCA+AGG - chr3_2:77940429-77940448 Msa0427250:intron 40.0%
GAGAAAGAACGAAGAAACCT+TGG + chr3_2:77940449-77940468 None:intergenic 40.0%
AAGTAAGGAGAGATGAACTC+AGG + chr3_2:77940559-77940578 None:intergenic 40.0%
GAAAATCTGCGCTGTCAATA+TGG + chr3_2:77940595-77940614 None:intergenic 40.0%
GAAGTTTGTGGCAGAATTCT+AGG + chr3_2:77940620-77940639 None:intergenic 40.0%
! CAAGAACTTGGTGAAGTTTG+TGG + chr3_2:77940632-77940651 None:intergenic 40.0%
CACAAACTTCACCAAGTTCT+TGG - chr3_2:77940630-77940649 Msa0427250:intron 40.0%
CTTGAATCTAGTGGCATCAT+TGG - chr3_2:77940697-77940716 Msa0427250:intron 40.0%
ATTGGGATATTCCCATCTAG+TGG - chr3_2:77940715-77940734 Msa0427250:intron 40.0%
CAGAGAGGCTGTAATATGTT+GGG - chr3_2:77940788-77940807 Msa0427250:intron 40.0%
ATGAACTCTAGACTCAACTG+TGG + chr3_2:77940841-77940860 None:intergenic 40.0%
!! ACTCCCATTTTTGTAGAGAG+GGG - chr3_2:77941005-77941024 Msa0427250:intron 40.0%
CAACCCCTCTCTACAAAAAT+GGG + chr3_2:77941011-77941030 None:intergenic 40.0%
AAGTCAGTACCTATAGACAG+AGG - chr3_2:77941129-77941148 Msa0427250:intron 40.0%
GTATCTGATCCTCTGTCTAT+AGG + chr3_2:77941141-77941160 None:intergenic 40.0%
ACACCTTCCAATAATTCTGG+CGG + chr3_2:77941189-77941208 None:intergenic 40.0%
ACCACACCTTCCAATAATTC+TGG + chr3_2:77941192-77941211 None:intergenic 40.0%
! ATTATTGGAAGGTGTGGTGA+AGG - chr3_2:77941194-77941213 Msa0427250:intron 40.0%
TATCCAATGGCAGCTAACTA+CGG + chr3_2:77941278-77941297 None:intergenic 40.0%
AAGAGAAATCTCTCCTCCAA+GGG - chr3_2:77941393-77941412 Msa0427250:intron 40.0%
GTAGTTTCTCAACTGTGAAG+GGG + chr3_2:77941422-77941441 None:intergenic 40.0%
GAGTAGTTTCTCAACTGTGA+AGG + chr3_2:77941424-77941443 None:intergenic 40.0%
CCGTGATGATCTTAGAACAA+AGG - chr3_2:77941466-77941485 Msa0427250:intron 40.0%
CTCTAACTGCTTTAACCTAG+CGG + chr3_2:77941649-77941668 None:intergenic 40.0%
GGTTAAAGCAGTTAGAGAAG+AGG - chr3_2:77941652-77941671 Msa0427250:CDS 40.0%
GTAGACCTGATACTTGATAG+TGG - chr3_2:77941928-77941947 Msa0427250:intron 40.0%
ATGACTCAACTTCTTGAAGC+TGG - chr3_2:77942106-77942125 Msa0427250:intron 40.0%
ACTGGTGAAAACTTGTCTCA+GGG - chr3_2:77942223-77942242 Msa0427250:intron 40.0%
!! TGCTCTTCAAGTTTTCAGGA+CGG + chr3_2:77942252-77942271 None:intergenic 40.0%
CAGTGAGCACAATGTCTTAT+GGG - chr3_2:77942314-77942333 Msa0427250:intron 40.0%
GCACAATGTCTTATGGGAAT+AGG - chr3_2:77942320-77942339 Msa0427250:intron 40.0%
!! TTTTGGCTAATGCCACACTT+TGG + chr3_2:77942508-77942527 None:intergenic 40.0%
TGTGGCATTAGCCAAAATCA+CGG - chr3_2:77942511-77942530 Msa0427250:intron 40.0%
AAAGTTCTTTGCGTTTGCAG+CGG - chr3_2:77942581-77942600 Msa0427250:intron 40.0%
!! GCAAATGTGAAGTTGGTGTT+TGG - chr3_2:77942610-77942629 Msa0427250:intron 40.0%
TCCTGGTTCAATTTCACACA+TGG - chr3_2:77943005-77943024 Msa0427250:intron 40.0%
!!! TTTGAGCTACTTTTTTGCGG+AGG - chr3_2:77943369-77943388 Msa0427250:intron 40.0%
!! AGAGCGTATGTTTTTGTTGG+TGG - chr3_2:77944142-77944161 Msa0427250:intron 40.0%
! CGATTTGGATAAGATTTGCC+TGG + chr3_2:77944330-77944349 None:intergenic 40.0%
!! GATGGGTTGGATATCACTTA+TGG + chr3_2:77944550-77944569 None:intergenic 40.0%
! GGATGTATATCTTGATGGGT+TGG + chr3_2:77944563-77944582 None:intergenic 40.0%
ACCCATCAAGATATACATCC+AGG - chr3_2:77944563-77944582 Msa0427250:intron 40.0%
TGTTGGATATCTTGTTGGGT+TGG + chr3_2:77944653-77944672 None:intergenic 40.0%
ATCGGTTGTCGTATATAACG+TGG - chr3_2:77945586-77945605 Msa0427250:intron 40.0%
!! CATAGGGGTGGTTTTTAAAG+GGG + chr3_2:77945624-77945643 None:intergenic 40.0%
! GCATAGGGGTGGTTTTTAAA+GGG + chr3_2:77945625-77945644 None:intergenic 40.0%
! AGCATAGGGGTGGTTTTTAA+AGG + chr3_2:77945626-77945645 None:intergenic 40.0%
TAAAAACCACCCCTATGCTT+AGG - chr3_2:77945627-77945646 Msa0427250:intron 40.0%
! TGGTTAGTTCCTAAGCATAG+GGG + chr3_2:77945639-77945658 None:intergenic 40.0%
! GTGGTTAGTTCCTAAGCATA+GGG + chr3_2:77945640-77945659 None:intergenic 40.0%
! TGTGGTTAGTTCCTAAGCAT+AGG + chr3_2:77945641-77945660 None:intergenic 40.0%
!!! TACCTACCGGTTTTGCTTAT+GGG + chr3_2:77945671-77945690 None:intergenic 40.0%
CTTCTAGATAGACAAGCTCT+AGG - chr3_2:77945711-77945730 Msa0427250:intron 40.0%
CTTCTTTCCTCTTCTATGAG+TGG + chr3_2:77945746-77945765 None:intergenic 40.0%
TTTAACACGGGAGTTGTTCA+AGG + chr3_2:77945868-77945887 None:intergenic 40.0%
CTGTTCCTATATAGTGTCCA+AGG - chr3_2:77945985-77946004 Msa0427250:CDS 40.0%
CAATCCCTTGGACACTATAT+AGG + chr3_2:77945993-77946012 None:intergenic 40.0%
AAAACAGTTTCTCATGCCGA+CGG - chr3_2:77946046-77946065 Msa0427250:intron 40.0%
GCAACATGTTAGTGGTGTAT+CGG + chr3_2:77946118-77946137 None:intergenic 40.0%
ACAGAACTGACACGTTCAAT+CGG - chr3_2:77946191-77946210 Msa0427250:CDS 40.0%
CAATCGGTTGAACTAGGTAT+CGG - chr3_2:77946207-77946226 Msa0427250:CDS 40.0%
! GTATCGGTCAATTTGTGAGT+TGG - chr3_2:77946223-77946242 Msa0427250:CDS 40.0%
AGTTGAACTTGGATTTCCTG+CGG - chr3_2:77946260-77946279 Msa0427250:CDS 40.0%
TGCTGCCGTAGAAAAATACA+TGG + chr3_2:77946422-77946441 None:intergenic 40.0%
TGGAATGTTATTACATCGCG+TGG - chr3_2:77946607-77946626 Msa0427250:CDS 40.0%
GCGTGGTAAGTAAAACTTAC+AGG - chr3_2:77946624-77946643 Msa0427250:CDS 40.0%
!!! CGCTACTTTTCCAAACTTAG+GGG - chr3_2:77946901-77946920 Msa0427250:CDS 40.0%
!!! GCTACTTTTCCAAACTTAGG+GGG - chr3_2:77946902-77946921 Msa0427250:CDS 40.0%
ATTCTCTGCTTCTACACAAC+AGG + chr3_2:77947504-77947523 None:intergenic 40.0%
TTGTCCAATGCCCATAGTAA+AGG + chr3_2:77947590-77947609 None:intergenic 40.0%
TGCAGTAGGACATTCTCTGA+GGG + chr3_2:77936591-77936610 None:intergenic 45.0%
!!! TCAGCGTTTTCAAGTGCAGT+AGG + chr3_2:77936605-77936624 None:intergenic 45.0%
CACTTGAAAACGCTGACCTA+TGG - chr3_2:77936609-77936628 Msa0427250:intron 45.0%
GAAGATTATTGTGGCGCCAT+AGG + chr3_2:77936628-77936647 None:intergenic 45.0%
! CCCTTTGAAGAATTAGGAGG+TGG - chr3_2:77936731-77936750 Msa0427250:intron 45.0%
CCCACCTCCTAATTCTTCAA+AGG + chr3_2:77936735-77936754 None:intergenic 45.0%
TGTGGAGACAAAGGAGTTGT+TGG + chr3_2:77937151-77937170 None:intergenic 45.0%
TCGGTAGTCCTTTGACTGAT+CGG - chr3_2:77937188-77937207 Msa0427250:intron 45.0%
CTCATCAACCGATCAGTCAA+AGG + chr3_2:77937199-77937218 None:intergenic 45.0%
! CTTTGACTGATCGGTTGATG+AGG - chr3_2:77937197-77937216 Msa0427250:intron 45.0%
CTCGAAAATGGCAATGACGA+CGG + chr3_2:77937268-77937287 None:intergenic 45.0%
GATTCCGAATGTGTAGGTGA+AGG + chr3_2:77937352-77937371 None:intergenic 45.0%
GTGTGTGATTCCGAATGTGT+AGG + chr3_2:77937358-77937377 None:intergenic 45.0%
GACATTTCACTTGGATGAGG+AGG + chr3_2:77937430-77937449 None:intergenic 45.0%
! GATGGAGAGAAATTCGGTGA+GGG + chr3_2:77937493-77937512 None:intergenic 45.0%
! AGATGGAGAGAAATTCGGTG+AGG + chr3_2:77937494-77937513 None:intergenic 45.0%
GAGGGAGATGGAGAGAAATT+CGG + chr3_2:77937499-77937518 None:intergenic 45.0%
! GGTGATGATGAAGAAGGAGA+GGG + chr3_2:77937517-77937536 None:intergenic 45.0%
! AGGTGATGATGAAGAAGGAG+AGG + chr3_2:77937518-77937537 None:intergenic 45.0%
GCTGAAGTTGCTAATTCCTC+TGG - chr3_2:77937610-77937629 Msa0427250:intron 45.0%
ATTCCTCTGGACATAGCAGT+AGG - chr3_2:77937623-77937642 Msa0427250:intron 45.0%
! TTCAAGGTGCACTTCTGAGA+CGG - chr3_2:77937678-77937697 Msa0427250:intron 45.0%
TCGTCATCATCCACGTCAAA+AGG + chr3_2:77937986-77938005 None:intergenic 45.0%
! CGTGGATGATGACGATACAA+CGG - chr3_2:77937991-77938010 Msa0427250:intron 45.0%
GGCAAGAGCTTTGCAATATC+AGG + chr3_2:77938164-77938183 None:intergenic 45.0%
GTTGATGTCATGGCATACTC+TGG - chr3_2:77938331-77938350 Msa0427250:intron 45.0%
TGTCATGGCATACTCTGGTT+AGG - chr3_2:77938336-77938355 Msa0427250:intron 45.0%
CCTTTAGTACGGTTTGAACC+CGG - chr3_2:77938407-77938426 Msa0427250:intron 45.0%
CTTTAGTACGGTTTGAACCC+GGG - chr3_2:77938408-77938427 Msa0427250:intron 45.0%
CAGGCGAGGAAGAGAAATAA+CGG + chr3_2:77938656-77938675 None:intergenic 45.0%
TACACTTCAAAGTTCAGGCG+AGG + chr3_2:77938670-77938689 None:intergenic 45.0%
AGTGCACCCTCAAAAACCAT+AGG - chr3_2:77939565-77939584 Msa0427250:intron 45.0%
ATCGTGGGTGAAATTGGACT+AGG - chr3_2:77939768-77939787 Msa0427250:intron 45.0%
!! TGAAGATGAGGCTGGTCTTA+AGG + chr3_2:77939850-77939869 None:intergenic 45.0%
CATGATTGGCAGTGCTAAAG+AGG + chr3_2:77939892-77939911 None:intergenic 45.0%
! TTGAGTTCGAGGAGCATGAT+TGG + chr3_2:77939906-77939925 None:intergenic 45.0%
TAGCCAAACAGCTAAGGTCT+TGG - chr3_2:77939958-77939977 Msa0427250:intron 45.0%
AGCCAAACAGCTAAGGTCTT+GGG - chr3_2:77939959-77939978 Msa0427250:intron 45.0%
AACCCAAGACCTTAGCTGTT+TGG + chr3_2:77939964-77939983 None:intergenic 45.0%
TGTTCCTTTCACTTGCAGCT+TGG - chr3_2:77940321-77940340 Msa0427250:intron 45.0%
TCACTTGCAGCTTGGAAAAC+CGG - chr3_2:77940329-77940348 Msa0427250:intron 45.0%
AAAACCGGACCCTCTCAATT+TGG - chr3_2:77940344-77940363 Msa0427250:intron 45.0%
AAGTTCTGCTTTGGCTGCAA+GGG + chr3_2:77940487-77940506 None:intergenic 45.0%
AAAGTTCTGCTTTGGCTGCA+AGG + chr3_2:77940488-77940507 None:intergenic 45.0%
AGAGGCTGAAAGTTCTGCTT+TGG + chr3_2:77940496-77940515 None:intergenic 45.0%
!! GGGAAGTGTTCTCTGAAGTA+AGG + chr3_2:77940574-77940593 None:intergenic 45.0%
CTAGGACTCAACCAAGAACT+TGG + chr3_2:77940644-77940663 None:intergenic 45.0%
TTCCCATCTAGTGGCATCAT+TGG - chr3_2:77940724-77940743 Msa0427250:intron 45.0%
TCCCATCTAGTGGCATCATT+GGG - chr3_2:77940725-77940744 Msa0427250:intron 45.0%
TCCCAATGATGCCACTAGAT+GGG + chr3_2:77940702-77940721 None:intergenic 45.0%
ATCCCAATGATGCCACTAGA+TGG + chr3_2:77940703-77940722 None:intergenic 45.0%
!! CCGGTGCTATGAGGATAATT+GGG + chr3_2:77940756-77940775 None:intergenic 45.0%
CCCAATTATCCTCATAGCAC+CGG - chr3_2:77940753-77940772 Msa0427250:intron 45.0%
!! ACCGGTGCTATGAGGATAAT+TGG + chr3_2:77940757-77940776 None:intergenic 45.0%
CCAACATATTACAGCCTCTC+TGG + chr3_2:77940790-77940809 None:intergenic 45.0%
CCAGAGAGGCTGTAATATGT+TGG - chr3_2:77940787-77940806 Msa0427250:intron 45.0%
TCGCAGTTGTTACTCTCACT+TGG + chr3_2:77940882-77940901 None:intergenic 45.0%
TGCGTGGCTGATCAACTTAA+TGG + chr3_2:77940966-77940985 None:intergenic 45.0%
CCAACCCCTCTCTACAAAAA+TGG + chr3_2:77941012-77941031 None:intergenic 45.0%
!! CCATTTTTGTAGAGAGGGGT+TGG - chr3_2:77941009-77941028 Msa0427250:intron 45.0%
!! GGTTGGTCTTCTCAACTAGA+GGG - chr3_2:77941026-77941045 Msa0427250:intron 45.0%
!! GTTGGTCTTCTCAACTAGAG+GGG - chr3_2:77941027-77941046 Msa0427250:intron 45.0%
TTCAGAGCCGCCAGAATTAT+TGG - chr3_2:77941179-77941198 Msa0427250:intron 45.0%
GCCAGAATTATTGGAAGGTG+TGG - chr3_2:77941188-77941207 Msa0427250:intron 45.0%
TTTCCGTAGTTAGCTGCCAT+TGG - chr3_2:77941272-77941291 Msa0427250:intron 45.0%
GAGCTTCAGCTCTTATCCAA+TGG + chr3_2:77941291-77941310 None:intergenic 45.0%
! GCTGAAGCTCTGATACTGTT+AGG - chr3_2:77941301-77941320 Msa0427250:intron 45.0%
GAAGAGAAATCTCTCCTCCA+AGG - chr3_2:77941392-77941411 Msa0427250:intron 45.0%
!! GACCTGATACTTGATAGTGG+TGG - chr3_2:77941931-77941950 Msa0427250:intron 45.0%
AGCCACCACTATCAAGTATC+AGG + chr3_2:77941936-77941955 None:intergenic 45.0%
CTCAACTTCTTGAAGCTGGT+AGG - chr3_2:77942110-77942129 Msa0427250:intron 45.0%
GCACCTTGAGACTTTCTGAT+TGG + chr3_2:77942142-77942161 None:intergenic 45.0%
! CTGAGACAAGTTTTCACCAG+TGG + chr3_2:77942224-77942243 None:intergenic 45.0%
CACTGGTGAAAACTTGTCTC+AGG - chr3_2:77942222-77942241 Msa0427250:intron 45.0%
!! GCTCTTCAAGTTTTCAGGAC+GGG + chr3_2:77942251-77942270 None:intergenic 45.0%
!! AGGCTCTCTAGAATCTGGTT+CGG + chr3_2:77942289-77942308 None:intergenic 45.0%
!! GTGTTAGGCTCTCTAGAATC+TGG + chr3_2:77942294-77942313 None:intergenic 45.0%
ACATTGTGCTCACTGGTGTT+AGG + chr3_2:77942309-77942328 None:intergenic 45.0%
CCATAAGACATTGTGCTCAC+TGG + chr3_2:77942316-77942335 None:intergenic 45.0%
CCAGTGAGCACAATGTCTTA+TGG - chr3_2:77942313-77942332 Msa0427250:intron 45.0%
GCAGCATGCAAATGTGAAGT+TGG - chr3_2:77942603-77942622 Msa0427250:intron 45.0%
GCCATGTGTGAAATTGAACC+AGG + chr3_2:77943009-77943028 None:intergenic 45.0%
!! GCGTATGTTTTTGTTGGTGG+TGG - chr3_2:77944145-77944164 Msa0427250:intron 45.0%
!!! GCACGTGCTTTTTCTCGATT+TGG + chr3_2:77944345-77944364 None:intergenic 45.0%
GATAAGGGTAAGAGCAAGAG+AGG + chr3_2:77944489-77944508 None:intergenic 45.0%
! GGTGATGGTCATTGTTGATG+TGG + chr3_2:77944529-77944548 None:intergenic 45.0%
ATCCAGGTAGATAGCTAAGC+TGG - chr3_2:77944579-77944598 Msa0427250:intron 45.0%
TACCAGCTTAGCTATCTACC+TGG + chr3_2:77944584-77944603 None:intergenic 45.0%
! GACTCTTGTTGTACTCCGAT+GGG + chr3_2:77944610-77944629 None:intergenic 45.0%
! TGACTCTTGTTGTACTCCGA+TGG + chr3_2:77944611-77944630 None:intergenic 45.0%
AAGAGTCAAGAGTCAAGAGC+TGG - chr3_2:77944623-77944642 Msa0427250:intron 45.0%
ACGTGAGTTTCATGCTCCTT+CGG + chr3_2:77945178-77945197 None:intergenic 45.0%
TTAGTTCCTAAGCATAGGGG+TGG + chr3_2:77945636-77945655 None:intergenic 45.0%
TTGCTTATGGGGCTTTCTTG+TGG + chr3_2:77945659-77945678 None:intergenic 45.0%
GAAAGCCCCATAAGCAAAAC+CGG - chr3_2:77945662-77945681 Msa0427250:intron 45.0%
!!! ACCTACCGGTTTTGCTTATG+GGG + chr3_2:77945670-77945689 None:intergenic 45.0%
!!! GTACCTACCGGTTTTGCTTA+TGG + chr3_2:77945672-77945691 None:intergenic 45.0%
TCCAAGTCCACTCATAGAAG+AGG - chr3_2:77945736-77945755 Msa0427250:intron 45.0%
! TCCTCTTCTATGAGTGGACT+TGG + chr3_2:77945740-77945759 None:intergenic 45.0%
! CTTGGGTTTGGTTGTTGAGT+AGG + chr3_2:77945779-77945798 None:intergenic 45.0%
TCAAAGCGGTTTCTTGGGTT+TGG + chr3_2:77945791-77945810 None:intergenic 45.0%
GTGGTTAGATCACAATCCCT+TGG + chr3_2:77946005-77946024 None:intergenic 45.0%
ATGCCGACGGAAAGAAATAC+TGG - chr3_2:77946059-77946078 Msa0427250:intron 45.0%
GGTCCAGTATTTCTTTCCGT+CGG + chr3_2:77946065-77946084 None:intergenic 45.0%
CACGTTCAATCGGTTGAACT+AGG - chr3_2:77946201-77946220 Msa0427250:CDS 45.0%
ACTTGGATTTCCTGCGGTAA+TGG - chr3_2:77946266-77946285 Msa0427250:CDS 45.0%
GCGATTATGGACCCTGTATT+GGG + chr3_2:77946765-77946784 None:intergenic 45.0%
TGCGATTATGGACCCTGTAT+TGG + chr3_2:77946766-77946785 None:intergenic 45.0%
CACTATTCACCCCCTAAGTT+TGG + chr3_2:77946914-77946933 None:intergenic 45.0%
!! CTATGGGCATTGGACAAGTA+CGG - chr3_2:77947593-77947612 Msa0427250:five_prime_UTR 45.0%
!! ATATAAAATATAAATTGTAT+TGG - chr3_2:77946587-77946606 Msa0427250:CDS 5.0%
TGCTTCAGTTTGAGCGTGTG+AGG + chr3_2:77936396-77936415 None:intergenic 50.0%
TCTGGGTCGAACACTTGATG+AGG + chr3_2:77936549-77936568 None:intergenic 50.0%
GTGTTCGACCCAGAGACAAA+TGG - chr3_2:77936555-77936574 Msa0427250:intron 50.0%
GTGCAGTAGGACATTCTCTG+AGG + chr3_2:77936592-77936611 None:intergenic 50.0%
!!! CGTCGTCATTGCCATTTTCG+AGG - chr3_2:77937266-77937285 Msa0427250:intron 50.0%
GGATGAGGAGGCAAACTAGA+GGG + chr3_2:77937418-77937437 None:intergenic 50.0%
TGGATGAGGAGGCAAACTAG+AGG + chr3_2:77937419-77937438 None:intergenic 50.0%
GATGAAGAAGGAGAGGGAGA+TGG + chr3_2:77937511-77937530 None:intergenic 50.0%
ATGCCTACTGCTATGTCCAG+AGG + chr3_2:77937629-77937648 None:intergenic 50.0%
!! CTTCTGAGACGGAGAGAAGT+AGG - chr3_2:77937689-77937708 Msa0427250:intron 50.0%
!! CATTTTCCAGGAGCTCTAGC+AGG - chr3_2:77937921-77937940 Msa0427250:intron 50.0%
ATAAGACCTGCTAGAGCTCC+TGG + chr3_2:77937930-77937949 None:intergenic 50.0%
! GAGCTCTAGCAGGTCTTATC+AGG - chr3_2:77937931-77937950 Msa0427250:intron 50.0%
GATGACGATACAACGGATCC+AGG - chr3_2:77937998-77938017 Msa0427250:intron 50.0%
CCGGGTTCAAACCGTACTAA+AGG + chr3_2:77938410-77938429 None:intergenic 50.0%
GAAAGGCAAAACCAGCAGAC+TGG + chr3_2:77938759-77938778 None:intergenic 50.0%
! AGAGAACAGGTTGGGCACAA+TGG + chr3_2:77938841-77938860 None:intergenic 50.0%
GGAAGTCTTCACGCAACAGT+TGG + chr3_2:77939662-77939681 None:intergenic 50.0%
! TGGGTGAAATTGGACTAGGC+TGG - chr3_2:77939772-77939791 Msa0427250:intron 50.0%
!!! AGCTTTTTGAGCTCTGAGGG+TGG - chr3_2:77940251-77940270 Msa0427250:intron 50.0%
GAAGCCAAATTGAGAGGGTC+CGG + chr3_2:77940351-77940370 None:intergenic 50.0%
GCAAGGGGACATGAACAAGA+AGG + chr3_2:77940471-77940490 None:intergenic 50.0%
AGTTCTGCTTTGGCTGCAAG+GGG + chr3_2:77940486-77940505 None:intergenic 50.0%
AACGGCAAAAGATGCGAGGA+AGG + chr3_2:77940909-77940928 None:intergenic 50.0%
! TCCTCGCATCTTTTGCCGTT+TGG - chr3_2:77940909-77940928 Msa0427250:intron 50.0%
TCCAAACGGCAAAAGATGCG+AGG + chr3_2:77940913-77940932 None:intergenic 50.0%
!! TCGCATCTTTTGCCGTTTGG+AGG - chr3_2:77940912-77940931 Msa0427250:intron 50.0%
!! GGGTTGGTCTTCTCAACTAG+AGG - chr3_2:77941025-77941044 Msa0427250:intron 50.0%
GAGCCGCCAGAATTATTGGA+AGG - chr3_2:77941183-77941202 Msa0427250:intron 50.0%
! ATTGGAAGGTGTGGTGAAGG+AGG - chr3_2:77941197-77941216 Msa0427250:intron 50.0%
AACTGTGAAGGGGAAACCCT+TGG + chr3_2:77941412-77941431 None:intergenic 50.0%
TCCTTGTGCATGCATCAGAG+CGG - chr3_2:77942063-77942082 Msa0427250:intron 50.0%
AGAGCGGAATCTTTCGATCG+TGG - chr3_2:77942079-77942098 Msa0427250:intron 50.0%
ATGCACAAGTGCACCAACAG+CGG + chr3_2:77942164-77942183 None:intergenic 50.0%
GTGGAGAAGTCTTGATGCAG+AGG + chr3_2:77942205-77942224 None:intergenic 50.0%
CTGCATCAAGACTTCTCCAC+TGG - chr3_2:77942205-77942224 Msa0427250:intron 50.0%
GGCATTAGCCAAAATCACGG+CGG - chr3_2:77942514-77942533 Msa0427250:intron 50.0%
! ATAGTGTGCCGCCGTGATTT+TGG + chr3_2:77942525-77942544 None:intergenic 50.0%
ACGGCGGCACACTATTATTC+TGG - chr3_2:77942530-77942549 Msa0427250:intron 50.0%
GCTCTTACCCTTATCTCTCC+CGG - chr3_2:77944494-77944513 Msa0427250:intron 50.0%
CCACAATCCGGGAGAGATAA+GGG + chr3_2:77944504-77944523 None:intergenic 50.0%
CCTTATCTCTCCCGGATTGT+GGG - chr3_2:77944502-77944521 Msa0427250:intron 50.0%
TTGATGTGGACCCACAATCC+GGG + chr3_2:77944515-77944534 None:intergenic 50.0%
GTTGATGTGGACCCACAATC+CGG + chr3_2:77944516-77944535 None:intergenic 50.0%
! GCTAAGCTGGTAATGCCCAT+CGG - chr3_2:77944592-77944611 Msa0427250:intron 50.0%
TTGCACTGCCCTTGAGTACA+TGG + chr3_2:77944921-77944940 None:intergenic 50.0%
TAAGCCCCTAGAGTCTAGAC+TGG - chr3_2:77945436-77945455 Msa0427250:intron 50.0%
GAGACCAGTCTAGACTCTAG+GGG + chr3_2:77945443-77945462 None:intergenic 50.0%
GGAGACCAGTCTAGACTCTA+GGG + chr3_2:77945444-77945463 None:intergenic 50.0%
TGGAGACCAGTCTAGACTCT+AGG + chr3_2:77945445-77945464 None:intergenic 50.0%
AATACCAACAAGCCCGTGCA+AGG - chr3_2:77945519-77945538 Msa0427250:intron 50.0%
CAAGGCGCACTAACAAGCTT+GGG - chr3_2:77945537-77945556 Msa0427250:intron 50.0%
!! AAGATGAAGGGCGCTGTCTT+TGG + chr3_2:77945694-77945713 None:intergenic 50.0%
AACACGGGAGTTGTTCAAGG+CGG + chr3_2:77945865-77945884 None:intergenic 50.0%
! CAACGTTTTGCCATTACCGC+AGG + chr3_2:77946279-77946298 None:intergenic 50.0%
ACGTCACGTGTCCCAATACA+GGG - chr3_2:77946751-77946770 Msa0427250:CDS 50.0%
TGGTTCTCCGATGACAAGAG+TGG - chr3_2:77946964-77946983 Msa0427250:CDS 50.0%
CTCTGCTTCTACACAACAGG+AGG + chr3_2:77947501-77947520 None:intergenic 50.0%
GACGGAGAAGAGCCATGTGA+TGG + chr3_2:77937250-77937269 None:intergenic 55.0%
TGAGGAGGCAAACTAGAGGG+TGG + chr3_2:77937415-77937434 None:intergenic 55.0%
ATACAACGGATCCAGGCAGC+AGG - chr3_2:77938005-77938024 Msa0427250:intron 55.0%
GTGACGAAATACCTGCTGCC+TGG + chr3_2:77938019-77938038 None:intergenic 55.0%
TGCAAAGCTCTTGCCATGGC+AGG - chr3_2:77938169-77938188 Msa0427250:intron 55.0%
GCAAAGCTCTTGCCATGGCA+GGG - chr3_2:77938170-77938189 Msa0427250:intron 55.0%
TGCCATGGCAGGGTCCATTA+AGG - chr3_2:77938180-77938199 Msa0427250:intron 55.0%
GCCATGGCAGGGTCCATTAA+GGG - chr3_2:77938181-77938200 Msa0427250:intron 55.0%
! TCCCTTAATGGACCCTGCCA+TGG + chr3_2:77938185-77938204 None:intergenic 55.0%
TGGCAGGGTCCATTAAGGGA+TGG - chr3_2:77938185-77938204 Msa0427250:intron 55.0%
!! AGAGCTTGACCGGTGCTATG+AGG + chr3_2:77940765-77940784 None:intergenic 55.0%
CTCTCTGGCAAGAGCTTGAC+CGG + chr3_2:77940775-77940794 None:intergenic 55.0%
CAGAGGATCAGATACGGCAG+CGG - chr3_2:77941146-77941165 Msa0427250:intron 55.0%
TGTGAAGGGGAAACCCTTGG+AGG + chr3_2:77941409-77941428 None:intergenic 55.0%
GCGGTAGCCCTAACATCACA+TGG + chr3_2:77941630-77941649 None:intergenic 55.0%
GTGATGTTAGGGCTACCGCT+AGG - chr3_2:77941631-77941650 Msa0427250:CDS 55.0%
TCCGCTCTGATGCATGCACA+AGG + chr3_2:77942067-77942086 None:intergenic 55.0%
!! AAGTCTCAAGGTGCCGCTGT+TGG - chr3_2:77942148-77942167 Msa0427250:intron 55.0%
! TGTCGCTTACTGCCATCACG+TGG + chr3_2:77942412-77942431 None:intergenic 55.0%
CCCTTATCTCTCCCGGATTG+TGG - chr3_2:77944501-77944520 Msa0427250:intron 55.0%
CCCACAATCCGGGAGAGATA+AGG + chr3_2:77944505-77944524 None:intergenic 55.0%
CTTGTTAGTGCGCCTTGCAC+GGG + chr3_2:77945534-77945553 None:intergenic 55.0%
! GCTTGTTAGTGCGCCTTGCA+CGG + chr3_2:77945535-77945554 None:intergenic 55.0%
GCAAGGCGCACTAACAAGCT+TGG - chr3_2:77945536-77945555 Msa0427250:intron 55.0%
GCCCCATAAGCAAAACCGGT+AGG - chr3_2:77945666-77945685 Msa0427250:intron 55.0%
GCGCTGTCTTTGGTACCTAC+CGG + chr3_2:77945684-77945703 None:intergenic 55.0%
GACGTCACGTGTCCCAATAC+AGG - chr3_2:77946750-77946769 Msa0427250:CDS 55.0%
CGGTCAAGCTCTTGCCAGAG+AGG - chr3_2:77940773-77940792 Msa0427250:intron 60.0%
GGCGCACTAACAAGCTTGGG+TGG - chr3_2:77945540-77945559 Msa0427250:intron 60.0%
TGCGCCTTGCACGGGCTTGT+TGG + chr3_2:77945526-77945545 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 77936252 77947619 77936252 ID=Msa0427250;Name=Msa0427250
chr3_2 mRNA 77936252 77947619 77936252 ID=Msa0427250-mRNA-1;Parent=Msa0427250;Name=Msa0427250-mRNA-1;_AED=0.14;_eAED=0.14;_QI=128|0.66|0.5|0.75|0.66|0.75|4|0|641
chr3_2 exon 77936252 77936358 77936252 ID=Msa0427250-mRNA-1:exon:20438;Parent=Msa0427250-mRNA-1
chr3_2 exon 77941519 77941790 77941519 ID=Msa0427250-mRNA-1:exon:20437;Parent=Msa0427250-mRNA-1
chr3_2 exon 77945845 77946026 77945845 ID=Msa0427250-mRNA-1:exon:20436;Parent=Msa0427250-mRNA-1
chr3_2 exon 77946127 77947619 77946127 ID=Msa0427250-mRNA-1:exon:20435;Parent=Msa0427250-mRNA-1
chr3_2 five_prime_UTR 77947492 77947619 77947492 ID=Msa0427250-mRNA-1:five_prime_utr;Parent=Msa0427250-mRNA-1
chr3_2 CDS 77946127 77947491 77946127 ID=Msa0427250-mRNA-1:cds;Parent=Msa0427250-mRNA-1
chr3_2 CDS 77945845 77946026 77945845 ID=Msa0427250-mRNA-1:cds;Parent=Msa0427250-mRNA-1
chr3_2 CDS 77941519 77941790 77941519 ID=Msa0427250-mRNA-1:cds;Parent=Msa0427250-mRNA-1
chr3_2 CDS 77936252 77936358 77936252 ID=Msa0427250-mRNA-1:cds;Parent=Msa0427250-mRNA-1
Gene Sequence

>Msa0427250

ATGACAACAACATCCTCACACGCTCAAACTGAAGCAGCAAAAACAGAACAAATCATCACTGAATTCTTCGCAAAGAGTCTCCACATAATCATAGAATCAAGAGCACTTTCTGCTTCATCTCGCAATTTCAGCACCCTCTCTTCACCATCTTCAACTTCTTCATCTTCCTCATCAAGTGTTCGACCCAGAGACAAATGGTTCAATCTAGCCCTCAGAGAATGTCCTACTGCACTTGAAAACGCTGACCTATGGCGCCACAATAATCTTCAGCCAATTGTGGTTGATGTTGTTTTGGTTCATAGAAACCTTAATTTCTCTCCAAAGGTTCGATCTTTTGTAAAAGAGAGAAACCCCTTTGAAGAATTAGGAGGTGGGTCTGAACAGAATGAGAAGATTGTTGAAAGATGGATTATTCATTATGAAAGCAAGAAAATTAAGGATTGTTCTAGTTCCAACACTGCAAACACTACAAGAAGGTCAAGTAACACTTTTTTGCAGAATTTGTATAAGAAATCTACTTTGCTTTTAAGGTCTTTGTATGCTACTGTTAGACTTTTACCTGCTTTTAAGATTTTTAAGGAACTGAGTTCATCTGCAAATGTTTGTGCTTTTAGTCTTGCTCATCGTGTTTCGACTTTTTTTGAACCATTTACTACTAAACAAGAAGCTGAAATGCTTAAGTTTGTGTTCACTCCTGTGGATACTAATTCTGGTAGGCTGTGTTTATCGGTGTTGTATCGTCCGTATGTTTCTGATGTGAGTTCGGAACCAACAACTCCTTTGTCTCCACAAGTTATAACTGATTATGTCGGTAGTCCTTTGACTGATCGGTTGATGAGGTATCCGTCGCTTCCTGTTGTTAGAATGCCATCACATGGCTCTTCTCCGTCGTCATTGCCATTTTCGAGGAGACATAGTTGGAGTTATGAAAATTGTAGTGCATCACCTCCTACAGTTAATTATTATTCACCTTCACCTACACATTCGGAATCACACACATTGGTTTCTAATGCTAGCTCTCAAGGTTATTGTCCACCCTCTAGTTTGCCTCCTCATCCAAGTGAAATGTCTTTGCTTCATAAGAAGAATGTGAATTTCGATGAGTACTATCCCTCACCGAATTTCTCTCCATCTCCCTCTCCTTCTTCATCATCACCTATCTATAGTTTGCGGTCATTAGCTTCGAAAACACTTTTACGCTCTGAAAGTGCTCCTGTCAACATACCTAATGCTGAAGTTGCTAATTCCTCTGGACATAGCAGTAGGCATAATTTGCCGCCGTCTACTCCTATTAGAATTTCAAGGTGCACTTCTGAGACGGAGAGAAGTAGGAATCTTATGCAATCATGCATTATGCCTGAGAAGATGTTTTCTATTGGAAAAGATGAGTCTAAAAAGTATTCTGGAGTGAAGATAGCACTTAACAGCTCACCACAGATTTCATTTTCCAGGAGCTCTAGCAGGTCTTATCAGGATGAGTTTGATGATACTGATTTCACATGTCCTTTTGACGTGGATGATGACGATACAACGGATCCAGGCAGCAGAGCGGAATCTTTCGATCGTGGTGATATGACTCAACTTCTTGAAGCTGGTAGGTTCTTTCCAATCAGAAAGTCTCAAGGTGCCGCTGTTGGTGCACTTGTGCATATGTTGAAGAAAGCAGCACCTCTGCATCAAGACTTCTCCACTGGTGAAAACTTGTCTCAGGGAGCCCGTCCTGAAAACTTGAAGAGCAATAACGTTCAAGAACCGAACCAGATTCTAGAGAGCCTAACACCAGTGAGCACAATGTCTTATGGGAATAGGAAAACAACAAAAGCAGAGAATAATCCTGTTAAGAATGATGTTCAAGTCTGCAACAACATTCATTTGTTGCATTGCAAGAGAAATCCTTTACTATGGGCATTGGACAAGTACGGATGA

Protein sequence

>Msa0427250

MTTTSSHAQTEAAKTEQIITEFFAKSLHIIIESRALSASSRNFSTLSSPSSTSSSSSSSVRPRDKWFNLALRECPTALENADLWRHNNLQPIVVDVVLVHRNLNFSPKVRSFVKERNPFEELGGGSEQNEKIVERWIIHYESKKIKDCSSSNTANTTRRSSNTFLQNLYKKSTLLLRSLYATVRLLPAFKIFKELSSSANVCAFSLAHRVSTFFEPFTTKQEAEMLKFVFTPVDTNSGRLCLSVLYRPYVSDVSSEPTTPLSPQVITDYVGSPLTDRLMRYPSLPVVRMPSHGSSPSSLPFSRRHSWSYENCSASPPTVNYYSPSPTHSESHTLVSNASSQGYCPPSSLPPHPSEMSLLHKKNVNFDEYYPSPNFSPSPSPSSSSPIYSLRSLASKTLLRSESAPVNIPNAEVANSSGHSSRHNLPPSTPIRISRCTSETERSRNLMQSCIMPEKMFSIGKDESKKYSGVKIALNSSPQISFSRSSSRSYQDEFDDTDFTCPFDVDDDDTTDPGSRAESFDRGDMTQLLEAGRFFPIRKSQGAAVGALVHMLKKAAPLHQDFSTGENLSQGARPENLKSNNVQEPNQILESLTPVSTMSYGNRKTTKAENNPVKNDVQVCNNIHLLHCKRNPLLWALDKYG*