Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0428390 | XP_024635981.1 | 90.280 | 535 | 11 | 3 | 1 | 496 | 1 | 533 | 0.0 | 971 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0428390 | sp|Q8Z9C3|PCNB_SALTI | 36.364 | 264 | 158 | 2 | 60 | 316 | 27 | 287 | 7.72e-42 | 158 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0428390 | A0A396J139 | 90.280 | 535 | 11 | 3 | 1 | 496 | 1 | 533 | 0.0 | 971 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0420340 | Msa0428390 | 0.802335 | 5.889870e-49 | -8.615850e-47 |
Msa0428390 | Msa0513000 | 0.804955 | 1.684781e-49 | -8.615850e-47 |
Msa0428390 | Msa1009820 | 0.815082 | 1.109012e-51 | -8.615850e-47 |
Msa0428390 | Msa1051200 | 0.816668 | 4.911175e-52 | -8.615850e-47 |
Msa0428390 | Msa1137700 | 0.802458 | 5.556749e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0428390 | MtrunA17_Chr3g0131751 | 90.280 | 535 | 11 | 3 | 1 | 496 | 1 | 533 | 0.0 | 971 |
Msa0428390 | MtrunA17_Chr8g0385901 | 63.916 | 521 | 144 | 4 | 1 | 483 | 1 | 515 | 0.0 | 667 |
Msa0428390 | MtrunA17_Chr5g0406751 | 36.674 | 469 | 232 | 9 | 62 | 476 | 59 | 516 | 1.41e-89 | 288 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0428390 | AT5G23690.1 | 57.085 | 494 | 166 | 6 | 37 | 484 | 33 | 526 | 0.0 | 553 |
Msa0428390 | AT3G48830.1 | 58.155 | 466 | 158 | 3 | 56 | 484 | 53 | 518 | 0.0 | 548 |
Msa0428390 | AT1G28090.3 | 51.674 | 478 | 186 | 6 | 44 | 479 | 3 | 477 | 3.12e-165 | 476 |
Msa0428390 | AT1G28090.2 | 52.473 | 465 | 178 | 5 | 57 | 479 | 41 | 504 | 3.98e-164 | 474 |
Msa0428390 | AT1G28090.1 | 52.473 | 465 | 178 | 5 | 57 | 479 | 77 | 540 | 1.60e-163 | 474 |
Msa0428390 | AT1G28090.4 | 49.677 | 465 | 171 | 6 | 57 | 479 | 41 | 484 | 2.06e-148 | 433 |
Msa0428390 | AT1G28090.5 | 63.736 | 273 | 97 | 2 | 57 | 328 | 77 | 348 | 7.88e-124 | 366 |
Msa0428390 | AT2G17580.1 | 40.042 | 472 | 221 | 9 | 62 | 476 | 59 | 525 | 2.98e-99 | 315 |
Find 172 sgRNAs with CRISPR-Local
Find 639 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACCGGGACTTTACAATTAA+TGG | 0.130521 | 3_2:-79238012 | Msa0428390:CDS |
AGCCAAAAGCTTATCTAAAT+TGG | 0.169200 | 3_2:+79236466 | None:intergenic |
AAACATTCGGTCTTCACTTT+TGG | 0.201331 | 3_2:-79232608 | Msa0428390:three_prime_UTR |
TTGCGGTTATTATGGAAATT+TGG | 0.215118 | 3_2:-79237292 | Msa0428390:CDS |
TCCTGCAGATATTTCATTTC+GGG | 0.215372 | 3_2:-79237704 | Msa0428390:CDS |
TACTTCCCCGGTGCCACTTT+TGG | 0.235909 | 3_2:+79232365 | None:intergenic |
AAGCTTCTTTGCGGTTATTA+TGG | 0.238802 | 3_2:-79237300 | Msa0428390:CDS |
GCTGCCCGGAAGGTTCTAAA+TGG | 0.244509 | 3_2:-79240110 | Msa0428390:CDS |
ATAAATTATATGCTAGCTTA+TGG | 0.272967 | 3_2:-79237331 | Msa0428390:CDS |
CCAACAAATTCCCACCATTA+TGG | 0.275648 | 3_2:+79233890 | None:intergenic |
CCTGAATTGTTAGATCCTTC+TGG | 0.298363 | 3_2:-79233817 | Msa0428390:CDS |
TAATCTTTGAGAGATTAATT+TGG | 0.300495 | 3_2:-79232410 | Msa0428390:three_prime_UTR |
CTTAGGATTTAGTATATCTA+AGG | 0.307307 | 3_2:-79237514 | Msa0428390:CDS |
GTCTTTACGTACAATTCTAA+TGG | 0.317581 | 3_2:+79233122 | None:intergenic |
CAAAAGGACCAATATGCTTT+TGG | 0.320964 | 3_2:-79237131 | Msa0428390:intron |
CTCCAATTTAGATAAGCTTT+TGG | 0.326776 | 3_2:-79236468 | Msa0428390:CDS |
CTAGCTAGCGCATAGGGTTC+GGG | 0.327938 | 3_2:+79240651 | None:intergenic |
AGGTCCTTCTCACAACTATT+AGG | 0.332171 | 3_2:+79238057 | None:intergenic |
ATTGTGAATTCCAAGCTCTT+TGG | 0.344412 | 3_2:+79240148 | None:intergenic |
GCTAGCTAGCGCATAGGGTT+CGG | 0.344748 | 3_2:+79240650 | None:intergenic |
CATGAGACCATGACGGTCAT+TGG | 0.348041 | 3_2:-79240581 | Msa0428390:exon |
TATATGCTAGCTTATGGTTC+TGG | 0.348087 | 3_2:-79237325 | Msa0428390:CDS |
ACCACTTACCAAAAGCATAT+TGG | 0.349998 | 3_2:+79237123 | None:intergenic |
ATCCTGCAGATATTTCATTT+CGG | 0.351685 | 3_2:-79237705 | Msa0428390:CDS |
CAACTCTGAGAGGTACTTAC+AGG | 0.351889 | 3_2:-79232782 | Msa0428390:three_prime_UTR |
CCAGAAGGATCTAACAATTC+AGG | 0.353886 | 3_2:+79233817 | None:intergenic |
GCTCCAAACCGTCCATGTTA+TGG | 0.355718 | 3_2:-79236446 | Msa0428390:CDS |
ACCGGGACTTTACAATTAAT+GGG | 0.362333 | 3_2:-79238011 | Msa0428390:intron |
AGATATACTTCTTCCCTTCC+AGG | 0.367335 | 3_2:-79237263 | Msa0428390:intron |
GTCCATGTTATGGCAGCTTA+TGG | 0.367771 | 3_2:-79236436 | Msa0428390:intron |
TGAGCCCATTTAGAACCTTC+CGG | 0.369841 | 3_2:+79240105 | None:intergenic |
TTCAGTATTAAGACTTGATA+AGG | 0.370310 | 3_2:-79237460 | Msa0428390:intron |
TCATATACAACTCTTTCATA+TGG | 0.376207 | 3_2:+79237869 | None:intergenic |
GTGCCTATCTTCTTCCATGC+AGG | 0.382076 | 3_2:+79240170 | None:intergenic |
GAGCCCATTTAGAACCTTCC+GGG | 0.384290 | 3_2:+79240106 | None:intergenic |
TTTGGACGGAGTAATTAGTA+TGG | 0.384848 | 3_2:+79232383 | None:intergenic |
CTGCCATAACATGGACGGTT+TGG | 0.385526 | 3_2:+79236443 | None:intergenic |
GTCTGATCATAATCAGATAT+TGG | 0.393261 | 3_2:-79232820 | Msa0428390:three_prime_UTR |
TTCTAAATGGGCTCAAGAAA+AGG | 0.396116 | 3_2:-79240097 | Msa0428390:CDS |
ATCCATGTGAACATGGCATA+TGG | 0.398011 | 3_2:+79238301 | None:intergenic |
TTTAGCCTTGCAGTCCATAA+TGG | 0.400501 | 3_2:-79233904 | Msa0428390:CDS |
AATTCTGTAAATGATTAATA+TGG | 0.403946 | 3_2:-79232441 | Msa0428390:three_prime_UTR |
ATGAAATAATCATTCTATCA+AGG | 0.404734 | 3_2:-79232849 | Msa0428390:three_prime_UTR |
TTTCCTGGTGTAAGATAGTT+GGG | 0.406015 | 3_2:-79238334 | Msa0428390:CDS |
AAAGAGCAGCTCGGTTTCAC+TGG | 0.407209 | 3_2:-79232922 | Msa0428390:CDS |
TTGGTACCTTACGAAGATAT+TGG | 0.411502 | 3_2:+79240510 | None:intergenic |
TTAATGCCTGATCCTGATCT+TGG | 0.411881 | 3_2:+79232943 | None:intergenic |
GATTATGAGTCCTTAGCTAA+TGG | 0.417511 | 3_2:-79233029 | Msa0428390:CDS |
ATTAGAATTGCTGCTCGCTT+AGG | 0.418243 | 3_2:-79237531 | Msa0428390:CDS |
TCACTGGGAGGCTAGTTTGA+AGG | 0.425989 | 3_2:-79232906 | Msa0428390:exon |
GGAATTCACAATTCGTCCAT+TGG | 0.428677 | 3_2:-79240137 | Msa0428390:CDS |
CGTCCATTGGACCCGCTGCC+CGG | 0.430040 | 3_2:-79240124 | Msa0428390:CDS |
CCATAATGGTGGGAATTTGT+TGG | 0.434014 | 3_2:-79233890 | Msa0428390:CDS |
AATGCAAAGGCATTGGAAGC+TGG | 0.434153 | 3_2:-79233790 | Msa0428390:CDS |
GCATATAATTTATTTCCATC+AGG | 0.442576 | 3_2:+79237341 | None:intergenic |
TCTAAATGGGCTCAAGAAAA+GGG | 0.442755 | 3_2:-79240096 | Msa0428390:CDS |
AAAGTGACCCCATCCCAAAA+AGG | 0.443322 | 3_2:-79232634 | Msa0428390:three_prime_UTR |
TCCCCTGCATGGAAGAAGAT+AGG | 0.451680 | 3_2:-79240173 | Msa0428390:CDS |
GTGAGTGAGTTAAATGCCTT+GGG | 0.452774 | 3_2:+79232703 | None:intergenic |
GTTATAATATCAAAGTCCTT+TGG | 0.463687 | 3_2:+79238581 | None:intergenic |
GGATATGATGTATACCTTGT+AGG | 0.465194 | 3_2:-79238638 | Msa0428390:CDS |
CATTGGACCCGCTGCCCGGA+AGG | 0.465838 | 3_2:-79240120 | Msa0428390:CDS |
ACGAAGATATTGGAAGGGAG+TGG | 0.468199 | 3_2:+79240520 | None:intergenic |
ATTTAGAACCTTCCGGGCAG+CGG | 0.471795 | 3_2:+79240112 | None:intergenic |
TTTAGAACCTTCCGGGCAGC+GGG | 0.474847 | 3_2:+79240113 | None:intergenic |
ACCCATTAATTGTAAAGTCC+CGG | 0.476275 | 3_2:+79238010 | None:intergenic |
TTGGAAGCAGTGAACATAGC+AGG | 0.476311 | 3_2:-79233871 | Msa0428390:CDS |
TGTCCCTCCTTCGAAATCCA+TGG | 0.478188 | 3_2:+79237152 | None:intergenic |
TCCATGTGAACATGGCATAT+GGG | 0.478630 | 3_2:+79238302 | None:intergenic |
ATGCAAAGGCATTGGAAGCT+GGG | 0.478735 | 3_2:-79233789 | Msa0428390:CDS |
TGCCTATCTTCTTCCATGCA+GGG | 0.478819 | 3_2:+79240171 | None:intergenic |
GGCTAAATGCAGCAACCACC+AGG | 0.479197 | 3_2:+79233920 | None:intergenic |
AACTTCAGCTGAGCTAAAAG+AGG | 0.485480 | 3_2:-79238561 | Msa0428390:intron |
AAGATAGGCACCAAAGAGCT+TGG | 0.492565 | 3_2:-79240158 | Msa0428390:CDS |
TCTTTGAGAGATTAATTTGG+CGG | 0.497381 | 3_2:-79232407 | Msa0428390:three_prime_UTR |
CTGCCCGGAAGGTTCTAAAT+GGG | 0.497838 | 3_2:-79240109 | Msa0428390:CDS |
GATTTCGAAGGAGGGACAAA+AGG | 0.500873 | 3_2:-79237147 | Msa0428390:CDS |
CTAATTACTCCGTCCAAAAG+TGG | 0.503410 | 3_2:-79232378 | Msa0428390:three_prime_UTR |
CTCACCATGGATTTCGAAGG+AGG | 0.506537 | 3_2:-79237156 | Msa0428390:CDS |
GTTCTGGTGAAGCTTCTTTG+CGG | 0.510348 | 3_2:-79237309 | Msa0428390:CDS |
TGAAATAATCATTCTATCAA+GGG | 0.511197 | 3_2:-79232848 | Msa0428390:three_prime_UTR |
CTTCCGGGCAGCGGGTCCAA+TGG | 0.512342 | 3_2:+79240121 | None:intergenic |
GTTGTGAGAAGGACCTTCTT+CGG | 0.513047 | 3_2:-79238050 | Msa0428390:CDS |
ACCCTATGCGCTAGCTAGCT+CGG | 0.514241 | 3_2:-79240646 | Msa0428390:five_prime_UTR |
ACCTTGTAGGAGGTTGTGTA+CGG | 0.515753 | 3_2:-79238625 | Msa0428390:CDS |
TCCCGAAATGAAATATCTGC+AGG | 0.516995 | 3_2:+79237703 | None:intergenic |
CCCCATATGCCATGTTCACA+TGG | 0.518226 | 3_2:-79238303 | Msa0428390:CDS |
GCAACCACCAGGGGATCCCT+TGG | 0.518539 | 3_2:+79233931 | None:intergenic |
GCCTATCTTCTTCCATGCAG+GGG | 0.518780 | 3_2:+79240172 | None:intergenic |
TCAATGCTTTATGCAATGCT+AGG | 0.520605 | 3_2:+79233962 | None:intergenic |
TGTGAGTGAGTTAAATGCCT+TGG | 0.521690 | 3_2:+79232702 | None:intergenic |
AAGAGTTGTATATGATTACA+TGG | 0.523526 | 3_2:-79237861 | Msa0428390:CDS |
TTGTATATCACCATTAGCTA+AGG | 0.524570 | 3_2:+79233019 | None:intergenic |
CATATACAACTCTTTCATAT+GGG | 0.524973 | 3_2:+79237870 | None:intergenic |
GGAAGGGTACTACTCTGCTC+TGG | 0.527733 | 3_2:-79232728 | Msa0428390:three_prime_UTR |
AGTGGGACGAAGATGAAGAG+TGG | 0.532758 | 3_2:+79240538 | None:intergenic |
TGATCGACCAAGGGATCCCC+TGG | 0.532953 | 3_2:-79233938 | Msa0428390:CDS |
GAAAATAGTAGCGGTGGCTG+TGG | 0.536926 | 3_2:-79240366 | Msa0428390:CDS |
TAACACTGCTAGAGGCAAGA+AGG | 0.536969 | 3_2:-79238109 | Msa0428390:CDS |
TGCTAGAGGCAAGAAGGGTG+TGG | 0.537319 | 3_2:-79238103 | Msa0428390:CDS |
CTACTCTGCTCTGGCACCCA+AGG | 0.537994 | 3_2:-79232719 | Msa0428390:three_prime_UTR |
GTTCCCACTTCACCAAGATC+AGG | 0.539186 | 3_2:-79232955 | Msa0428390:CDS |
CCCGTACACAACCTCCTACA+AGG | 0.541241 | 3_2:+79238624 | None:intergenic |
CCATGTGAACATGGCATATG+GGG | 0.543366 | 3_2:+79238303 | None:intergenic |
CAATGACCGTCATGGTCTCA+TGG | 0.543809 | 3_2:+79240582 | None:intergenic |
TACCATAAGCTGCCATAACA+TGG | 0.543963 | 3_2:+79236434 | None:intergenic |
ACCGAGCTAGCTAGCGCATA+GGG | 0.544096 | 3_2:+79240645 | None:intergenic |
AAGAGCAGCTCGGTTTCACT+GGG | 0.548338 | 3_2:-79232921 | Msa0428390:CDS |
TGGTATGAATGCAAAGGCAT+TGG | 0.552008 | 3_2:-79233797 | Msa0428390:CDS |
ACTTCACCAAGATCAGGATC+AGG | 0.556391 | 3_2:-79232949 | Msa0428390:CDS |
AACACTGCTAGAGGCAAGAA+GGG | 0.556413 | 3_2:-79238108 | Msa0428390:CDS |
TGATCCTGATCTTGGTGAAG+TGG | 0.556453 | 3_2:+79232951 | None:intergenic |
TCCCTTCCAATATCTTCGTA+AGG | 0.557251 | 3_2:-79240516 | Msa0428390:intron |
GCCTTTGCATTCATACCAGA+AGG | 0.560801 | 3_2:+79233802 | None:intergenic |
TCTGTAAATGATTAATATGG+TGG | 0.560839 | 3_2:-79232438 | Msa0428390:three_prime_UTR |
GCCTTGCAGTCCATAATGGT+GGG | 0.560897 | 3_2:-79233900 | Msa0428390:CDS |
ATTTCATTTCGGGAAGATTG+TGG | 0.567097 | 3_2:-79237694 | Msa0428390:intron |
AAAATTAACATATACCTGGA+AGG | 0.570613 | 3_2:+79237249 | None:intergenic |
TGGTATCATCCATGTGAACA+TGG | 0.572381 | 3_2:+79238294 | None:intergenic |
CTGTAAGTACCTCTCAGAGT+TGG | 0.573745 | 3_2:+79232783 | None:intergenic |
CCTTGTAGGAGGTTGTGTAC+GGG | 0.574482 | 3_2:-79238624 | Msa0428390:CDS |
TACCTTACGAAGATATTGGA+AGG | 0.580587 | 3_2:+79240514 | None:intergenic |
AGCCTTGCAGTCCATAATGG+TGG | 0.580771 | 3_2:-79233901 | Msa0428390:CDS |
TAGCTAGCGCATAGGGTTCG+GGG | 0.581267 | 3_2:+79240652 | None:intergenic |
TTGCTCACCATGGATTTCGA+AGG | 0.581317 | 3_2:-79237159 | Msa0428390:CDS |
CAACTCTTTCATATGGGTCA+AGG | 0.582351 | 3_2:+79237876 | None:intergenic |
TCCCACCATTATGGACTGCA+AGG | 0.582464 | 3_2:+79233899 | None:intergenic |
CGAAGATATTGGAAGGGAGT+GGG | 0.585271 | 3_2:+79240521 | None:intergenic |
GACGAAGATGAAGAGTGGAT+TGG | 0.585564 | 3_2:+79240543 | None:intergenic |
GATCCTGATCTTGGTGAAGT+GGG | 0.585678 | 3_2:+79232952 | None:intergenic |
GTTGTATATGATTACATGGG+AGG | 0.594473 | 3_2:-79237857 | Msa0428390:CDS |
AAATTAACATATACCTGGAA+GGG | 0.595461 | 3_2:+79237250 | None:intergenic |
TGCAAAGGCATTGGAAGCTG+GGG | 0.601578 | 3_2:-79233788 | Msa0428390:intron |
CACCGAGCTAGCTAGCGCAT+AGG | 0.604138 | 3_2:+79240644 | None:intergenic |
TCCTTCTGGTATGAATGCAA+AGG | 0.604970 | 3_2:-79233803 | Msa0428390:CDS |
ATTTAGTATATCTAAGGAGA+CGG | 0.606375 | 3_2:-79237508 | Msa0428390:CDS |
GAAATGAGAAATCCCCTGCA+TGG | 0.611807 | 3_2:-79240184 | Msa0428390:CDS |
CATGGATGATACCATTGTTG+AGG | 0.614021 | 3_2:-79238285 | Msa0428390:intron |
AGCACCTAATAGTTGTGAGA+AGG | 0.616905 | 3_2:-79238061 | Msa0428390:CDS |
AGCAGCTCGGTTTCACTGGG+AGG | 0.617904 | 3_2:-79232918 | Msa0428390:CDS |
AGCTAGCGCATAGGGTTCGG+GGG | 0.618537 | 3_2:+79240653 | None:intergenic |
CGAATGTGTGAAAAGGAGTG+CGG | 0.619268 | 3_2:-79233087 | Msa0428390:CDS |
TTTCCCAACTATCTTACACC+AGG | 0.619588 | 3_2:+79238331 | None:intergenic |
GAAATAATCATTCTATCAAG+GGG | 0.621819 | 3_2:-79232847 | Msa0428390:three_prime_UTR |
CATAATCAGATATTGGTGGA+AGG | 0.624709 | 3_2:-79232813 | Msa0428390:three_prime_UTR |
TGGAAGCAGTGAACATAGCA+GGG | 0.626704 | 3_2:-79233870 | Msa0428390:CDS |
AAATCTACCAACCTCAACAA+TGG | 0.627654 | 3_2:+79238274 | None:intergenic |
AAGCATTGAGTGATCGACCA+AGG | 0.627843 | 3_2:-79233948 | Msa0428390:CDS |
TGATTTCCATGAGACCATGA+CGG | 0.628148 | 3_2:-79240588 | Msa0428390:exon |
TATTCTAAAGCAAACACCAA+AGG | 0.629392 | 3_2:-79238597 | Msa0428390:CDS |
GATCTTCCTACACTATCCGT+TGG | 0.630426 | 3_2:+79232669 | None:intergenic |
AGAGTTGTATATGATTACAT+GGG | 0.632927 | 3_2:-79237860 | Msa0428390:CDS |
CTAAATGGGCTCAAGAAAAG+GGG | 0.634501 | 3_2:-79240095 | Msa0428390:intron |
TTTGAAGCCAATGACCGTCA+TGG | 0.636190 | 3_2:+79240574 | None:intergenic |
GTGAGAAGGACCTTCTTCGG+TGG | 0.637166 | 3_2:-79238047 | Msa0428390:CDS |
TATGATGTATACCTTGTAGG+AGG | 0.639841 | 3_2:-79238635 | Msa0428390:CDS |
AGCATTGAGTGATCGACCAA+GGG | 0.641314 | 3_2:-79233947 | Msa0428390:CDS |
TCAGGCATTAAAGAGCAGCT+CGG | 0.643581 | 3_2:-79232931 | Msa0428390:CDS |
GCTAAATGCAGCAACCACCA+GGG | 0.643905 | 3_2:+79233921 | None:intergenic |
ACATAGCCAACGGATAGTGT+AGG | 0.644572 | 3_2:-79232675 | Msa0428390:three_prime_UTR |
ACCTTACGAAGATATTGGAA+GGG | 0.645750 | 3_2:+79240515 | None:intergenic |
ACAGACGAAAATAGTAGCGG+TGG | 0.648551 | 3_2:-79240372 | Msa0428390:CDS |
TCACCATGGATTTCGAAGGA+GGG | 0.650319 | 3_2:-79237155 | Msa0428390:CDS |
TGATCATAATCAGATATTGG+TGG | 0.654621 | 3_2:-79232817 | Msa0428390:three_prime_UTR |
TCAGGAAATCTCATATCATG+TGG | 0.655522 | 3_2:+79233835 | None:intergenic |
CTCACAAGCTACATAGCCAA+CGG | 0.658255 | 3_2:-79232685 | Msa0428390:three_prime_UTR |
CTAAATGCAGCAACCACCAG+GGG | 0.668263 | 3_2:+79233922 | None:intergenic |
ATAAGCTGCCATAACATGGA+CGG | 0.679548 | 3_2:+79236438 | None:intergenic |
GGTCGAATTCCAACTCTGAG+AGG | 0.689984 | 3_2:-79232792 | Msa0428390:three_prime_UTR |
TCGACCAAGGGATCCCCTGG+TGG | 0.701999 | 3_2:-79233935 | Msa0428390:CDS |
TGTGCAGAAATCTATCGTTG+CGG | 0.710752 | 3_2:-79240415 | Msa0428390:CDS |
TCCACAGACGAAAATAGTAG+CGG | 0.712769 | 3_2:-79240375 | Msa0428390:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTTGAAATTTTGAATT+GGG | - | chr3_2:79232785-79232804 | Msa0428390:three_prime_UTR | 10.0% |
!!! | TATTTTTTTATTATCTTTTC+AGG | - | chr3_2:79235672-79235691 | Msa0428390:intron | 10.0% |
!!! | ATTTTTTTATTATCTTTTCA+GGG | - | chr3_2:79235673-79235692 | Msa0428390:intron | 10.0% |
!!! | TTTTTTTATGTATATACTTT+GGG | - | chr3_2:79239399-79239418 | Msa0428390:intron | 10.0% |
!! | ATGAAATGAATAATGAAATT+AGG | + | chr3_2:79232601-79232620 | None:intergenic | 15.0% |
!!! | CATTTTTTGAAATTTTGAAT+TGG | - | chr3_2:79232784-79232803 | Msa0428390:three_prime_UTR | 15.0% |
!!! | TTTTTTGTATTGTGTAATTA+TGG | - | chr3_2:79232808-79232827 | Msa0428390:three_prime_UTR | 15.0% |
!!! | AATTGTTTTTGTTGTTTAAT+TGG | - | chr3_2:79232831-79232850 | Msa0428390:three_prime_UTR | 15.0% |
!! | TTCTTTCTTTCTATATTATA+TGG | - | chr3_2:79233002-79233021 | Msa0428390:CDS | 15.0% |
!! | TATATTATATGGATGATTAA+AGG | - | chr3_2:79233013-79233032 | Msa0428390:CDS | 15.0% |
!!! | CAATTGAAAAGTTTAAATTT+TGG | + | chr3_2:79233326-79233345 | None:intergenic | 15.0% |
!! | GAATAAATTCTCAAAATTAT+AGG | - | chr3_2:79233994-79234013 | Msa0428390:intron | 15.0% |
!! | TACATAAAATATAAGAAATC+AGG | + | chr3_2:79235402-79235421 | None:intergenic | 15.0% |
!! | AATAAAAAAATAATTCATCC+AGG | + | chr3_2:79235664-79235683 | None:intergenic | 15.0% |
!!! | CAAAATAATTTGTATTTCTT+GGG | - | chr3_2:79236469-79236488 | Msa0428390:CDS | 15.0% |
!! | ATGTTTATCATGTAAATAAA+AGG | + | chr3_2:79236673-79236692 | None:intergenic | 15.0% |
!!! | TGATTATTTTTTTTAGTGAT+AGG | - | chr3_2:79238352-79238371 | Msa0428390:intron | 15.0% |
!!! | ATTTCAGGTTTTTATTTTTT+TGG | - | chr3_2:79238514-79238533 | Msa0428390:intron | 15.0% |
!! | AATTTCAATCATACTATAAT+TGG | + | chr3_2:79238877-79238896 | None:intergenic | 15.0% |
!!! | CTTTTTTTATGTATATACTT+TGG | - | chr3_2:79239398-79239417 | Msa0428390:intron | 15.0% |
!!! | AAGAAATTTTATCTTGAAAA+TGG | + | chr3_2:79239535-79239554 | None:intergenic | 15.0% |
!! | AATTCTGTAAATGATTAATA+TGG | - | chr3_2:79240602-79240621 | Msa0428390:five_prime_UTR | 15.0% |
!! | ATAATGAAATTAGGAAAGAA+GGG | + | chr3_2:79232592-79232611 | None:intergenic | 20.0% |
!! | AATAATGAAATTAGGAAAGA+AGG | + | chr3_2:79232593-79232612 | None:intergenic | 20.0% |
!! | TTCATTATTCATTTCATTCA+AGG | - | chr3_2:79232604-79232623 | Msa0428390:three_prime_UTR | 20.0% |
!! | TGAACAAATTATCATGTAAA+TGG | + | chr3_2:79233043-79233062 | None:intergenic | 20.0% |
!!! | TGATTTCAATCAATTCATTT+TGG | + | chr3_2:79233190-79233209 | None:intergenic | 20.0% |
!! | TTATATAAACTTAGAAGTCT+TGG | + | chr3_2:79233437-79233456 | None:intergenic | 20.0% |
!!! | TTTGAAATTAAATCATGCTA+TGG | - | chr3_2:79233912-79233931 | Msa0428390:CDS | 20.0% |
!! | ATTGTATCTCAAAAATGTTA+TGG | + | chr3_2:79233952-79233971 | None:intergenic | 20.0% |
!! | TCAAAATTATAGGAGTAAAT+TGG | - | chr3_2:79234004-79234023 | Msa0428390:intron | 20.0% |
!!! | ACTTCAAAGAATTTTAGATA+TGG | - | chr3_2:79234798-79234817 | Msa0428390:intron | 20.0% |
!! | GGAAAGAAATATAAGAAAAA+CGG | + | chr3_2:79235259-79235278 | None:intergenic | 20.0% |
!!! | ACTGAATTTTCTGTATAAAT+AGG | - | chr3_2:79235303-79235322 | Msa0428390:intron | 20.0% |
!!! | ATAAATTATATGCTAGCTTA+TGG | - | chr3_2:79235712-79235731 | Msa0428390:intron | 20.0% |
!! | ATAAACCACATAAAATTGAA+AGG | + | chr3_2:79236435-79236454 | None:intergenic | 20.0% |
!!! | GCAAAATAATTTGTATTTCT+TGG | - | chr3_2:79236468-79236487 | Msa0428390:CDS | 20.0% |
!! | TTTATCATGTAAATAAAAGG+AGG | + | chr3_2:79236670-79236689 | None:intergenic | 20.0% |
!!! | ATTTATAACCCTTTTTGTTT+TGG | - | chr3_2:79236827-79236846 | Msa0428390:intron | 20.0% |
!! | TTCTTAATCCAAAACAAAAA+GGG | + | chr3_2:79236838-79236857 | None:intergenic | 20.0% |
!! | TTTCTTAATCCAAAACAAAA+AGG | + | chr3_2:79236839-79236858 | None:intergenic | 20.0% |
!! | TTTCGTTATAATCAAATTTC+AGG | - | chr3_2:79238499-79238518 | Msa0428390:intron | 20.0% |
!!! | GTATAATTATCTGAAACAAA+TGG | - | chr3_2:79238636-79238655 | Msa0428390:CDS | 20.0% |
!! | TGCAATAAACTAATATCAAA+AGG | + | chr3_2:79238810-79238829 | None:intergenic | 20.0% |
!!! | ACTTTTTAAGGATACAAAAA+TGG | - | chr3_2:79239447-79239466 | Msa0428390:intron | 20.0% |
!! | GAAATATTCATACATTAACA+AGG | + | chr3_2:79239854-79239873 | None:intergenic | 20.0% |
!!! | ATTTTTAATGTCAATTTGAC+AGG | - | chr3_2:79239890-79239909 | Msa0428390:intron | 20.0% |
!! | ATGAAATAATCATTCTATCA+AGG | - | chr3_2:79240194-79240213 | Msa0428390:intron | 20.0% |
!! | TGAAATAATCATTCTATCAA+GGG | - | chr3_2:79240195-79240214 | Msa0428390:intron | 20.0% |
!!! | TCTAATAATTTTGTATCTTC+TGG | - | chr3_2:79240554-79240573 | Msa0428390:CDS | 20.0% |
!!! | CTAATAATTTTGTATCTTCT+GGG | - | chr3_2:79240555-79240574 | Msa0428390:CDS | 20.0% |
!!! | TAATAATTTTGTATCTTCTG+GGG | - | chr3_2:79240556-79240575 | Msa0428390:CDS | 20.0% |
!!! | TAATCTTTGAGAGATTAATT+TGG | - | chr3_2:79240633-79240652 | Msa0428390:five_prime_UTR | 20.0% |
!!! | TTTTGTTGTTTAATTGGTGA+AGG | - | chr3_2:79232837-79232856 | Msa0428390:three_prime_UTR | 25.0% |
!! | TTTTCAATTGCATTATCATC+TGG | - | chr3_2:79233336-79233355 | Msa0428390:intron | 25.0% |
! | ATTACAGTAATGATGTAAGA+TGG | - | chr3_2:79233511-79233530 | Msa0428390:intron | 25.0% |
! | ATTATAGAGAAATTCTTGCA+TGG | - | chr3_2:79233539-79233558 | Msa0428390:intron | 25.0% |
!! | CTTATTCTTTTCCAAATAGT+TGG | + | chr3_2:79233809-79233828 | None:intergenic | 25.0% |
! | GAAAAGAATAAGAACAACTA+TGG | - | chr3_2:79233817-79233836 | Msa0428390:CDS | 25.0% |
! | GATACAATTGAATAGCTAAT+AGG | - | chr3_2:79233964-79233983 | Msa0428390:CDS | 25.0% |
!!! | ACAATTTTAACAGAAGACAA+TGG | + | chr3_2:79234084-79234103 | None:intergenic | 25.0% |
! | CAATTTCTTGACATTTCAAA+AGG | + | chr3_2:79234369-79234388 | None:intergenic | 25.0% |
! | GTTATAATATCAAAGTCCTT+TGG | + | chr3_2:79234465-79234484 | None:intergenic | 25.0% |
! | TCATTTGGATTTGCATAAAA+GGG | - | chr3_2:79234628-79234647 | Msa0428390:intron | 25.0% |
! | AAACAGCAATACAAGAAAAA+CGG | + | chr3_2:79234872-79234891 | None:intergenic | 25.0% |
! | GTTAAAATTTGACACCTAAT+TGG | + | chr3_2:79234918-79234937 | None:intergenic | 25.0% |
! | CATAAGTACAAAATAATGTG+TGG | + | chr3_2:79235114-79235133 | None:intergenic | 25.0% |
! | CATATACAACTCTTTCATAT+GGG | + | chr3_2:79235176-79235195 | None:intergenic | 25.0% |
! | TCATATACAACTCTTTCATA+TGG | + | chr3_2:79235177-79235196 | None:intergenic | 25.0% |
! | AAGAGTTGTATATGATTACA+TGG | - | chr3_2:79235182-79235201 | Msa0428390:intron | 25.0% |
! | AGAGTTGTATATGATTACAT+GGG | - | chr3_2:79235183-79235202 | Msa0428390:intron | 25.0% |
!! | TTATGTAGTGTAAACCATTT+TGG | - | chr3_2:79235415-79235434 | Msa0428390:intron | 25.0% |
! | CTTAGGATTTAGTATATCTA+AGG | - | chr3_2:79235529-79235548 | Msa0428390:intron | 25.0% |
! | ATTTAGTATATCTAAGGAGA+CGG | - | chr3_2:79235535-79235554 | Msa0428390:intron | 25.0% |
! | TTCAGTATTAAGACTTGATA+AGG | - | chr3_2:79235583-79235602 | Msa0428390:intron | 25.0% |
!!! | TTTTATTATCTTTTCAGGGA+AGG | - | chr3_2:79235677-79235696 | Msa0428390:intron | 25.0% |
! | GCATATAATTTATTTCCATC+AGG | + | chr3_2:79235705-79235724 | None:intergenic | 25.0% |
! | AAATTAACATATACCTGGAA+GGG | + | chr3_2:79235796-79235815 | None:intergenic | 25.0% |
! | AAAATTAACATATACCTGGA+AGG | + | chr3_2:79235797-79235816 | None:intergenic | 25.0% |
! | ATGCAAAATTAACATATACC+TGG | + | chr3_2:79235801-79235820 | None:intergenic | 25.0% |
!!! | TTTAGTTTTTGACTCAATCA+TGG | - | chr3_2:79235820-79235839 | Msa0428390:intron | 25.0% |
!! | GTAAGAAAGCTTTAATGAAA+AGG | + | chr3_2:79236338-79236357 | None:intergenic | 25.0% |
! | TTACTTGTCAAATATACACT+CGG | - | chr3_2:79236354-79236373 | Msa0428390:intron | 25.0% |
! | CAAATAAAAAACTGTCAATG+TGG | + | chr3_2:79236525-79236544 | None:intergenic | 25.0% |
!!! | CAGTTTTTTATTTGACCTTT+TGG | - | chr3_2:79236531-79236550 | Msa0428390:intron | 25.0% |
!!! | TTTTCTCTAGAATTGCAATT+AGG | - | chr3_2:79236748-79236767 | Msa0428390:intron | 25.0% |
! | TAAACAACAACCAAATCAAA+CGG | + | chr3_2:79237713-79237732 | None:intergenic | 25.0% |
!!! | TGACTAAAGTTGGTTTTTTT+TGG | - | chr3_2:79237952-79237971 | Msa0428390:intron | 25.0% |
!!! | GACTAAAGTTGGTTTTTTTT+GGG | - | chr3_2:79237953-79237972 | Msa0428390:intron | 25.0% |
!!! | TTGTTTTTTGGTTCTGTTTT+AGG | - | chr3_2:79238162-79238181 | Msa0428390:intron | 25.0% |
!!! | TTATCTTAAAGGGTGTTTTT+AGG | - | chr3_2:79238206-79238225 | Msa0428390:intron | 25.0% |
! | AACGAAATAAGATACAAATG+GGG | + | chr3_2:79238259-79238278 | None:intergenic | 25.0% |
! | GAACGAAATAAGATACAAAT+GGG | + | chr3_2:79238260-79238279 | None:intergenic | 25.0% |
! | TGAACGAAATAAGATACAAA+TGG | + | chr3_2:79238261-79238280 | None:intergenic | 25.0% |
! | TGAGAGATAATATTAAAGAG+TGG | + | chr3_2:79238426-79238445 | None:intergenic | 25.0% |
! | AATCATACTATAATTGGCAA+AGG | + | chr3_2:79238871-79238890 | None:intergenic | 25.0% |
!! | ATAGCTAAATCTATGTTTTC+AGG | - | chr3_2:79239050-79239069 | Msa0428390:intron | 25.0% |
! | AAAAAGAAAAAATGCTCACT+AGG | + | chr3_2:79239384-79239403 | None:intergenic | 25.0% |
!! | TAGCATTTTCCATATACTTT+AGG | - | chr3_2:79239609-79239628 | Msa0428390:intron | 25.0% |
! | TGGATGATTAATAATAGTTC+AGG | + | chr3_2:79239674-79239693 | None:intergenic | 25.0% |
! | TTAAACTTCGTAAAAAGATG+TGG | + | chr3_2:79239828-79239847 | None:intergenic | 25.0% |
! | GAAATAATCATTCTATCAAG+GGG | - | chr3_2:79240196-79240215 | Msa0428390:intron | 25.0% |
! | TTCATGAAATAGCTATCTTT+GGG | + | chr3_2:79240524-79240543 | None:intergenic | 25.0% |
! | ATTCATGAAATAGCTATCTT+TGG | + | chr3_2:79240525-79240544 | None:intergenic | 25.0% |
! | TCTGTAAATGATTAATATGG+TGG | - | chr3_2:79240605-79240624 | Msa0428390:five_prime_UTR | 25.0% |
CTAGCCTAGATAAAAGTAAA+AGG | + | chr3_2:79233297-79233316 | None:intergenic | 30.0% | |
GAAACAAACAACGTAATTGT+TGG | + | chr3_2:79233720-79233739 | None:intergenic | 30.0% | |
TAGTTGGATGAAGGTTAATT+AGG | + | chr3_2:79233793-79233812 | None:intergenic | 30.0% | |
TTAACCTTCATCCAACTATT+TGG | - | chr3_2:79233795-79233814 | Msa0428390:CDS | 30.0% | |
! | TTTTCCAAATAGTTGGATGA+AGG | + | chr3_2:79233802-79233821 | None:intergenic | 30.0% |
ACAATTGAATAGCTAATAGG+TGG | - | chr3_2:79233967-79233986 | Msa0428390:CDS | 30.0% | |
AACAACAACTTAGACATGTT+TGG | - | chr3_2:79234034-79234053 | Msa0428390:intron | 30.0% | |
ACAACAACTTAGACATGTTT+GGG | - | chr3_2:79234035-79234054 | Msa0428390:intron | 30.0% | |
!! | ATTTTAACAGAAGACAATGG+AGG | + | chr3_2:79234081-79234100 | None:intergenic | 30.0% |
!! | GTGTCGCATTTTTATTTGTT+GGG | - | chr3_2:79234225-79234244 | Msa0428390:intron | 30.0% |
AATCAAGAGAAATTCTTGCA+TGG | + | chr3_2:79234278-79234297 | None:intergenic | 30.0% | |
!!! | TATGTTTCACTGTTTTTGCT+TGG | - | chr3_2:79234322-79234341 | Msa0428390:intron | 30.0% |
TTTCTTGACATTTCAAAAGG+AGG | + | chr3_2:79234366-79234385 | None:intergenic | 30.0% | |
! | AATTGTTTTCTTCTCGTTGT+AGG | - | chr3_2:79234384-79234403 | Msa0428390:intron | 30.0% |
!! | TATTCTAAAGCAAACACCAA+AGG | - | chr3_2:79234446-79234465 | Msa0428390:intron | 30.0% |
TTTACGAACTTACAGTCTAT+TGG | - | chr3_2:79234531-79234550 | Msa0428390:intron | 30.0% | |
TATTAACTCAGCTCAATCTA+TGG | + | chr3_2:79234563-79234582 | None:intergenic | 30.0% | |
AAACACAGTTACAACTTACA+AGG | - | chr3_2:79234583-79234602 | Msa0428390:intron | 30.0% | |
AACACAGTTACAACTTACAA+GGG | - | chr3_2:79234584-79234603 | Msa0428390:intron | 30.0% | |
GTCATTTGGATTTGCATAAA+AGG | - | chr3_2:79234627-79234646 | Msa0428390:intron | 30.0% | |
AACAGCAATACAAGAAAAAC+GGG | + | chr3_2:79234871-79234890 | None:intergenic | 30.0% | |
AAATTTGACACCTAATTGGA+CGG | + | chr3_2:79234914-79234933 | None:intergenic | 30.0% | |
!! | TCAAATTTTAACACTGCTAG+AGG | - | chr3_2:79234926-79234945 | Msa0428390:intron | 30.0% |
GGTGGAAAAATTGTTTAAAC+CGG | - | chr3_2:79235014-79235033 | Msa0428390:intron | 30.0% | |
GTGGAAAAATTGTTTAAACC+GGG | - | chr3_2:79235015-79235034 | Msa0428390:intron | 30.0% | |
ATCCTGCAGATATTTCATTT+CGG | - | chr3_2:79235338-79235357 | Msa0428390:intron | 30.0% | |
ATACTATAATGCTAATGTCC+TGG | - | chr3_2:79235643-79235662 | Msa0428390:intron | 30.0% | |
TTGCGGTTATTATGGAAATT+TGG | - | chr3_2:79235751-79235770 | Msa0428390:intron | 30.0% | |
GGAATGAATGTTTATTGAGA+TGG | - | chr3_2:79235841-79235860 | Msa0428390:intron | 30.0% | |
! | TTCTGAACAAGCACATATTT+TGG | + | chr3_2:79236063-79236082 | None:intergenic | 30.0% |
! | TCTAGTTTAAGTCATATGCA+AGG | + | chr3_2:79236119-79236138 | None:intergenic | 30.0% |
ATACAATTGCTCAACCAAAA+AGG | + | chr3_2:79236310-79236329 | None:intergenic | 30.0% | |
! | GAAAGCTTTAATGAAAAGGT+AGG | + | chr3_2:79236334-79236353 | None:intergenic | 30.0% |
! | AGGATCCTTTCAATTTTATG+TGG | - | chr3_2:79236427-79236446 | Msa0428390:intron | 30.0% |
GTGGTTTATCAAACTAATCT+TGG | - | chr3_2:79236446-79236465 | Msa0428390:CDS | 30.0% | |
! | CTCCAATTTAGATAAGCTTT+TGG | - | chr3_2:79236575-79236594 | Msa0428390:intron | 30.0% |
AGCCAAAAGCTTATCTAAAT+TGG | + | chr3_2:79236580-79236599 | None:intergenic | 30.0% | |
! | TAAAGGCAATTTTGTTGCAA+AGG | + | chr3_2:79236638-79236657 | None:intergenic | 30.0% |
AAATTCACGTCTTCAAACAT+AGG | + | chr3_2:79236811-79236830 | None:intergenic | 30.0% | |
! | TTGCACTTTCAGATCATTTT+AGG | - | chr3_2:79237055-79237074 | Msa0428390:intron | 30.0% |
!!! | TTTTGGGTTCATATTCCTTT+TGG | - | chr3_2:79237234-79237253 | Msa0428390:intron | 30.0% |
! | TTGCTTATTCAGTTTGCTTT+GGG | - | chr3_2:79237347-79237366 | Msa0428390:CDS | 30.0% |
TTTATTGGGGTGATTTCATT+TGG | - | chr3_2:79237566-79237585 | Msa0428390:intron | 30.0% | |
TGGAAGCAACATTTATTACA+TGG | - | chr3_2:79237586-79237605 | Msa0428390:intron | 30.0% | |
GGAAGCAACATTTATTACAT+GGG | - | chr3_2:79237587-79237606 | Msa0428390:intron | 30.0% | |
!!! | ATCTTGGTTTTGACTTAGTT+TGG | - | chr3_2:79237831-79237850 | Msa0428390:intron | 30.0% |
ACTATAGAACCAAAATAGCA+GGG | + | chr3_2:79237887-79237906 | None:intergenic | 30.0% | |
AAAAACAAGCACCAAAAACA+CGG | + | chr3_2:79238150-79238169 | None:intergenic | 30.0% | |
!!! | TGTTTTTGGTGCTTGTTTTT+TGG | - | chr3_2:79238150-79238169 | Msa0428390:intron | 30.0% |
!!! | TTTTTTGGTTCTGTTTTAGG+TGG | - | chr3_2:79238165-79238184 | Msa0428390:intron | 30.0% |
!! | TTTTAGGTGGAGATTTGTTT+GGG | - | chr3_2:79238178-79238197 | Msa0428390:intron | 30.0% |
! | TTACATTGATGACAAGCATA+AGG | + | chr3_2:79238729-79238748 | None:intergenic | 30.0% |
ATGAACAATCTCATTACAAG+TGG | - | chr3_2:79239009-79239028 | Msa0428390:intron | 30.0% | |
! | TGATGAACATTTTGTATCTC+AGG | - | chr3_2:79239324-79239343 | Msa0428390:intron | 30.0% |
GGATAACATCCTAAAGTATA+TGG | + | chr3_2:79239621-79239640 | None:intergenic | 30.0% | |
AATGGAAGTCTCGATTTAAT+TGG | + | chr3_2:79239694-79239713 | None:intergenic | 30.0% | |
GTCTTTACGTACAATTCTAA+TGG | + | chr3_2:79239924-79239943 | None:intergenic | 30.0% | |
AAAAAATCTCTGTCAAAGCA+AGG | - | chr3_2:79239981-79240000 | Msa0428390:intron | 30.0% | |
TTGTATATCACCATTAGCTA+AGG | + | chr3_2:79240027-79240046 | None:intergenic | 30.0% | |
GTCTGATCATAATCAGATAT+TGG | - | chr3_2:79240223-79240242 | Msa0428390:intron | 30.0% | |
TGATCATAATCAGATATTGG+TGG | - | chr3_2:79240226-79240245 | Msa0428390:intron | 30.0% | |
!!! | CTTAATTTTTTGTCAACGCT+TGG | - | chr3_2:79240294-79240313 | Msa0428390:intron | 30.0% |
TCATGAAATAGCTATCTTTG+GGG | + | chr3_2:79240523-79240542 | None:intergenic | 30.0% | |
! | TCTTTGAGAGATTAATTTGG+CGG | - | chr3_2:79240636-79240655 | Msa0428390:five_prime_UTR | 30.0% |
ACCTTACGAAGATATTGGAA+GGG | + | chr3_2:79232531-79232550 | None:intergenic | 35.0% | |
TACCTTACGAAGATATTGGA+AGG | + | chr3_2:79232532-79232551 | None:intergenic | 35.0% | |
TTGGTACCTTACGAAGATAT+TGG | + | chr3_2:79232536-79232555 | None:intergenic | 35.0% | |
AATGTAGATGAAGATGAGTG+AGG | + | chr3_2:79232560-79232579 | None:intergenic | 35.0% | |
! | ATTTTCGTCTGTGGAAGTTT+CGG | + | chr3_2:79232663-79232682 | None:intergenic | 35.0% |
TGTCAGTAGTGAAGAAATCA+AGG | - | chr3_2:79232749-79232768 | Msa0428390:three_prime_UTR | 35.0% | |
GTCAGTAGTGAAGAAATCAA+GGG | - | chr3_2:79232750-79232769 | Msa0428390:three_prime_UTR | 35.0% | |
ATTGTGAATTCCAAGCTCTT+TGG | + | chr3_2:79232898-79232917 | None:intergenic | 35.0% | |
! | TTCTAAATGGGCTCAAGAAA+AGG | - | chr3_2:79232946-79232965 | Msa0428390:CDS | 35.0% |
! | TCTAAATGGGCTCAAGAAAA+GGG | - | chr3_2:79232947-79232966 | Msa0428390:CDS | 35.0% |
TTTGTAGTGCGCATCTATTT+CGG | - | chr3_2:79233112-79233131 | Msa0428390:CDS | 35.0% | |
!!! | TTCATTTTGGTGCTTTGTGA+AGG | + | chr3_2:79233177-79233196 | None:intergenic | 35.0% |
!! | GGTGCCTTTTACTTTTATCT+AGG | - | chr3_2:79233290-79233309 | Msa0428390:intron | 35.0% |
!! | TAGAACAATAGCCTTGTAAC+TGG | - | chr3_2:79233376-79233395 | Msa0428390:intron | 35.0% |
AACATACAAGACCAGTTACA+AGG | + | chr3_2:79233390-79233409 | None:intergenic | 35.0% | |
ACAAACAACGTAATTGTTGG+AGG | + | chr3_2:79233717-79233736 | None:intergenic | 35.0% | |
TGTCGAAAAGATAAACCTCT+CGG | - | chr3_2:79233754-79233773 | Msa0428390:intron | 35.0% | |
TGGATGAAGGTTAATTAGGT+CGG | + | chr3_2:79233789-79233808 | None:intergenic | 35.0% | |
!! | GTTTCCGTTGATTTCATTCA+TGG | - | chr3_2:79234102-79234121 | Msa0428390:intron | 35.0% |
ACCACCATGAATGAAATCAA+CGG | + | chr3_2:79234109-79234128 | None:intergenic | 35.0% | |
! | TTCATTCATGGTGGTGATAT+TGG | - | chr3_2:79234114-79234133 | Msa0428390:intron | 35.0% |
! | TCATTCATGGTGGTGATATT+GGG | - | chr3_2:79234115-79234134 | Msa0428390:intron | 35.0% |
!! | CGTGTCGCATTTTTATTTGT+TGG | - | chr3_2:79234224-79234243 | Msa0428390:intron | 35.0% |
GGATATGATGTATACCTTGT+AGG | - | chr3_2:79234405-79234424 | Msa0428390:intron | 35.0% | |
TATGATGTATACCTTGTAGG+AGG | - | chr3_2:79234408-79234427 | Msa0428390:intron | 35.0% | |
ACACAGTTACAACTTACAAG+GGG | - | chr3_2:79234585-79234604 | Msa0428390:intron | 35.0% | |
GTTTGTCATGCAATCATACA+AGG | + | chr3_2:79234659-79234678 | None:intergenic | 35.0% | |
!! | CAAACATTGACTCAATTTGC+AGG | - | chr3_2:79234674-79234693 | Msa0428390:intron | 35.0% |
!!! | AGGTGATGAAAGTATTTTCC+TGG | - | chr3_2:79234694-79234713 | Msa0428390:intron | 35.0% |
! | TTTTCCTGGTGTAAGATAGT+TGG | - | chr3_2:79234708-79234727 | Msa0428390:intron | 35.0% |
TTTCCTGGTGTAAGATAGTT+GGG | - | chr3_2:79234709-79234728 | Msa0428390:intron | 35.0% | |
AAATCTACCAACCTCAACAA+TGG | + | chr3_2:79234772-79234791 | None:intergenic | 35.0% | |
! | ATTTTATCTCCCGTCCAATT+AGG | - | chr3_2:79234901-79234920 | Msa0428390:intron | 35.0% |
AATTTGACACCTAATTGGAC+GGG | + | chr3_2:79234913-79234932 | None:intergenic | 35.0% | |
! | AACAATTTTTCCACCGAAGA+AGG | + | chr3_2:79235009-79235028 | None:intergenic | 35.0% |
AACCGGGACTTTACAATTAA+TGG | - | chr3_2:79235031-79235050 | Msa0428390:intron | 35.0% | |
ACCGGGACTTTACAATTAAT+GGG | - | chr3_2:79235032-79235051 | Msa0428390:intron | 35.0% | |
ACCCATTAATTGTAAAGTCC+CGG | + | chr3_2:79235036-79235055 | None:intergenic | 35.0% | |
AACTAACTTCATGTTCTTGC+AGG | - | chr3_2:79235139-79235158 | Msa0428390:intron | 35.0% | |
GTTGTATATGATTACATGGG+AGG | - | chr3_2:79235186-79235205 | Msa0428390:intron | 35.0% | |
TCCTGCAGATATTTCATTTC+GGG | - | chr3_2:79235339-79235358 | Msa0428390:intron | 35.0% | |
ATTTCATTTCGGGAAGATTG+TGG | - | chr3_2:79235349-79235368 | Msa0428390:intron | 35.0% | |
! | TATATGCTAGCTTATGGTTC+TGG | - | chr3_2:79235718-79235737 | Msa0428390:intron | 35.0% |
AAGCTTCTTTGCGGTTATTA+TGG | - | chr3_2:79235743-79235762 | Msa0428390:intron | 35.0% | |
TTATTGAGATGGAACATCAC+AGG | - | chr3_2:79235852-79235871 | Msa0428390:intron | 35.0% | |
! | CAAAAGGACCAATATGCTTT+TGG | - | chr3_2:79235912-79235931 | Msa0428390:intron | 35.0% |
! | ACCAATATGCTTTTGGTAAG+TGG | - | chr3_2:79235919-79235938 | Msa0428390:intron | 35.0% |
! | ACCACTTACCAAAAGCATAT+TGG | + | chr3_2:79235923-79235942 | None:intergenic | 35.0% |
TGGTTATCCAGAAAACTTTC+CGG | + | chr3_2:79235972-79235991 | None:intergenic | 35.0% | |
AGGAAGAATGATCTCTTGTA+TGG | + | chr3_2:79235992-79236011 | None:intergenic | 35.0% | |
AGGATAACAAACAAGCTACT+GGG | + | chr3_2:79236022-79236041 | None:intergenic | 35.0% | |
! | TCCTTTTGTTCCACTACTTA+AGG | - | chr3_2:79236157-79236176 | Msa0428390:intron | 35.0% |
! | TCCTTAAGTAGTGGAACAAA+AGG | + | chr3_2:79236161-79236180 | None:intergenic | 35.0% |
TTGCTCAACCAAAAAGGATT+TGG | + | chr3_2:79236304-79236323 | None:intergenic | 35.0% | |
GACTGCAATGAAATTCCAAA+AGG | + | chr3_2:79236549-79236568 | None:intergenic | 35.0% | |
CATGTAAATAAAAGGAGGCA+CGG | + | chr3_2:79236665-79236684 | None:intergenic | 35.0% | |
ATGTGTAATGCTTTGTGAAG+AGG | - | chr3_2:79236694-79236713 | Msa0428390:intron | 35.0% | |
TTCTAGTGATTGTGTAGTGT+TGG | - | chr3_2:79236879-79236898 | Msa0428390:intron | 35.0% | |
! | TTGTTCCTTTTTGTGCATCT+TGG | - | chr3_2:79236915-79236934 | Msa0428390:intron | 35.0% |
!! | GATCATTTTAGGTCCCTTTT+AGG | - | chr3_2:79237066-79237085 | Msa0428390:intron | 35.0% |
ACAACAACCAGTCCAAATAA+CGG | + | chr3_2:79237111-79237130 | None:intergenic | 35.0% | |
! | ATTCCTTTTGGTCTGTGTTT+AGG | - | chr3_2:79237246-79237265 | Msa0428390:intron | 35.0% |
! | GTTGCTTATTCAGTTTGCTT+TGG | - | chr3_2:79237346-79237365 | Msa0428390:CDS | 35.0% |
! | TGCTTATTCAGTTTGCTTTG+GGG | - | chr3_2:79237348-79237367 | Msa0428390:CDS | 35.0% |
!!! | TTTAGGTGTTTTCGGTGTTA+TGG | - | chr3_2:79237655-79237674 | Msa0428390:intron | 35.0% |
CAACCAAATCAAACGGAAAA+AGG | + | chr3_2:79237706-79237725 | None:intergenic | 35.0% | |
CAAAAAGTAAGACGAAAGAC+TGG | + | chr3_2:79237748-79237767 | None:intergenic | 35.0% | |
!!! | TGACTTAGTTTGGTTTTCTC+TGG | - | chr3_2:79237841-79237860 | Msa0428390:CDS | 35.0% |
GACTATAGAACCAAAATAGC+AGG | + | chr3_2:79237888-79237907 | None:intergenic | 35.0% | |
!!! | GCTATTTTGGTTCTATAGTC+TGG | - | chr3_2:79237888-79237907 | Msa0428390:intron | 35.0% |
!!! | ATTTTGGTTCTATAGTCTGG+TGG | - | chr3_2:79237891-79237910 | Msa0428390:intron | 35.0% |
!!! | TTTTGGTTCTATAGTCTGGT+GGG | - | chr3_2:79237892-79237911 | Msa0428390:intron | 35.0% |
GATCTCGAATCAAAAGTGAT+CGG | + | chr3_2:79237918-79237937 | None:intergenic | 35.0% | |
!! | GATCACTTTTGATTCGAGAT+CGG | - | chr3_2:79237917-79237936 | Msa0428390:intron | 35.0% |
!! | ATCACTTTTGATTCGAGATC+GGG | - | chr3_2:79237918-79237937 | Msa0428390:intron | 35.0% |
GTCAGTTCTTTGACTAAAGT+TGG | - | chr3_2:79237942-79237961 | Msa0428390:intron | 35.0% | |
!!! | AGTCTGGGAGTTTTATTTTG+AGG | - | chr3_2:79238081-79238100 | Msa0428390:CDS | 35.0% |
!!! | GTCTGGGAGTTTTATTTTGA+GGG | - | chr3_2:79238082-79238101 | Msa0428390:CDS | 35.0% |
!!! | TATTTTGAGGGTGTTCTTTG+TGG | - | chr3_2:79238094-79238113 | Msa0428390:CDS | 35.0% |
!!! | ATTTTGAGGGTGTTCTTTGT+GGG | - | chr3_2:79238095-79238114 | Msa0428390:CDS | 35.0% |
!! | GTTTTAGGTGGAGATTTGTT+TGG | - | chr3_2:79238177-79238196 | Msa0428390:intron | 35.0% |
! | TTTAGGTGGAGATTTGTTTG+GGG | - | chr3_2:79238179-79238198 | Msa0428390:intron | 35.0% |
!! | TTTGGGGGGTTTTATCTTAA+AGG | - | chr3_2:79238195-79238214 | Msa0428390:intron | 35.0% |
!! | TTGGGGGGTTTTATCTTAAA+GGG | - | chr3_2:79238196-79238215 | Msa0428390:intron | 35.0% |
!!! | TCTTAAAGGGTGTTTTTAGG+TGG | - | chr3_2:79238209-79238228 | Msa0428390:intron | 35.0% |
TATGGTGTACCGTATATATG+CGG | - | chr3_2:79238233-79238252 | Msa0428390:intron | 35.0% | |
!! | AACAAACACAGATTAGCTTC+TGG | + | chr3_2:79238382-79238401 | None:intergenic | 35.0% |
GACATTTCCTCAGAAACAAA+GGG | + | chr3_2:79238686-79238705 | None:intergenic | 35.0% | |
AGACATTTCCTCAGAAACAA+AGG | + | chr3_2:79238687-79238706 | None:intergenic | 35.0% | |
CATTACAAGTGGATCAACAA+AGG | - | chr3_2:79239020-79239039 | Msa0428390:intron | 35.0% | |
TCAATGCTTTATGCAATGCT+AGG | + | chr3_2:79239084-79239103 | None:intergenic | 35.0% | |
TCAGGAAATCTCATATCATG+TGG | + | chr3_2:79239211-79239230 | None:intergenic | 35.0% | |
ATCTTGCAGAGTCTATTAGA+GGG | - | chr3_2:79239284-79239303 | Msa0428390:intron | 35.0% | |
! | ACATTTTGTATCTCAGGCTA+TGG | - | chr3_2:79239330-79239349 | Msa0428390:intron | 35.0% |
TTAACAAGTGCCCTAACTAA+GGG | - | chr3_2:79239566-79239585 | Msa0428390:intron | 35.0% | |
TAAACAAGTGCCCTTAGTTA+GGG | + | chr3_2:79239579-79239598 | None:intergenic | 35.0% | |
TTAAACAAGTGCCCTTAGTT+AGG | + | chr3_2:79239580-79239599 | None:intergenic | 35.0% | |
!! | TAACTAAGGGCACTTGTTTA+AGG | - | chr3_2:79239579-79239598 | Msa0428390:intron | 35.0% |
TTAGGATGTTATCCAGTACA+TGG | - | chr3_2:79239627-79239646 | Msa0428390:intron | 35.0% | |
! | ACGTTTTCGAATGTGTGAAA+AGG | - | chr3_2:79239949-79239968 | Msa0428390:intron | 35.0% |
GATTATGAGTCCTTAGCTAA+TGG | - | chr3_2:79240014-79240033 | Msa0428390:intron | 35.0% | |
CATAATCAGATATTGGTGGA+AGG | - | chr3_2:79240230-79240249 | Msa0428390:intron | 35.0% | |
!!! | ATTTTTTGTCAACGCTTGGA+AGG | - | chr3_2:79240298-79240317 | Msa0428390:intron | 35.0% |
!!! | TTTTTTGTCAACGCTTGGAA+GGG | - | chr3_2:79240299-79240318 | Msa0428390:intron | 35.0% |
!!! | TGTTTTTGCCTTTTTGGGAT+GGG | + | chr3_2:79240420-79240439 | None:intergenic | 35.0% |
!! | ATGTTTTTGCCTTTTTGGGA+TGG | + | chr3_2:79240421-79240440 | None:intergenic | 35.0% |
!! | CCGAATGTTTTTGCCTTTTT+GGG | + | chr3_2:79240425-79240444 | None:intergenic | 35.0% |
CCCAAAAAGGCAAAAACATT+CGG | - | chr3_2:79240422-79240441 | Msa0428390:intron | 35.0% | |
!! | ACCGAATGTTTTTGCCTTTT+TGG | + | chr3_2:79240426-79240445 | None:intergenic | 35.0% |
! | AAACATTCGGTCTTCACTTT+TGG | - | chr3_2:79240435-79240454 | Msa0428390:intron | 35.0% |
!! | AACATTCGGTCTTCACTTTT+GGG | - | chr3_2:79240436-79240455 | Msa0428390:intron | 35.0% |
CATGAAATAGCTATCTTTGG+GGG | + | chr3_2:79240522-79240541 | None:intergenic | 35.0% | |
TTTGGACGGAGTAATTAGTA+TGG | + | chr3_2:79240663-79240682 | None:intergenic | 35.0% | |
TGATTTCCATGAGACCATGA+CGG | - | chr3_2:79232455-79232474 | Msa0428390:three_prime_UTR | 40.0% | |
TCCCTTCCAATATCTTCGTA+AGG | - | chr3_2:79232527-79232546 | Msa0428390:intron | 40.0% | |
AGATGAAGATGAGTGAGGAT+TGG | + | chr3_2:79232555-79232574 | None:intergenic | 40.0% | |
TGTGCAGAAATCTATCGTTG+CGG | - | chr3_2:79232628-79232647 | Msa0428390:three_prime_UTR | 40.0% | |
TCCACAGACGAAAATAGTAG+CGG | - | chr3_2:79232668-79232687 | Msa0428390:three_prime_UTR | 40.0% | |
GGAATTCACAATTCGTCCAT+TGG | - | chr3_2:79232906-79232925 | Msa0428390:exon | 40.0% | |
! | CTAAATGGGCTCAAGAAAAG+GGG | - | chr3_2:79232948-79232967 | Msa0428390:CDS | 40.0% |
TTGTAGTGCGCATCTATTTC+GGG | - | chr3_2:79233113-79233132 | Msa0428390:CDS | 40.0% | |
!! | TGTGAAGGTACTTAGATGCA+CGG | + | chr3_2:79233162-79233181 | None:intergenic | 40.0% |
! | CCACTGTTTTCACATTGACA+AGG | + | chr3_2:79233272-79233291 | None:intergenic | 40.0% |
CCTTGTCAATGTGAAAACAG+TGG | - | chr3_2:79233269-79233288 | Msa0428390:intron | 40.0% | |
TCATAGCTTAAGCACGCATA+AGG | - | chr3_2:79233409-79233428 | Msa0428390:intron | 40.0% | |
GAGAAATTCTTGCATGGTCT+CGG | - | chr3_2:79233545-79233564 | Msa0428390:intron | 40.0% | |
AACAACGTAATTGTTGGAGG+CGG | + | chr3_2:79233714-79233733 | None:intergenic | 40.0% | |
!! | TCCGTTGATTTCATTCATGG+TGG | - | chr3_2:79234105-79234124 | Msa0428390:intron | 40.0% |
GAGAAATTCTTGCATGGTCT+CGG | + | chr3_2:79233545-79233564 | None:intergenic | 40.0% | |
AACTTCAGCTGAGCTAAAAG+AGG | - | chr3_2:79234482-79234501 | Msa0428390:intron | 40.0% | |
GTTGTGCTTACACTGTCATT+TGG | - | chr3_2:79234613-79234632 | Msa0428390:intron | 40.0% | |
TTTCCCAACTATCTTACACC+AGG | + | chr3_2:79234715-79234734 | None:intergenic | 40.0% | |
TCCATGTGAACATGGCATAT+GGG | + | chr3_2:79234744-79234763 | None:intergenic | 40.0% | |
ATCCATGTGAACATGGCATA+TGG | + | chr3_2:79234745-79234764 | None:intergenic | 40.0% | |
TGGTATCATCCATGTGAACA+TGG | + | chr3_2:79234752-79234771 | None:intergenic | 40.0% | |
CATGGATGATACCATTGTTG+AGG | - | chr3_2:79234758-79234777 | Msa0428390:intron | 40.0% | |
GATGATACCATTGTTGAGGT+TGG | - | chr3_2:79234762-79234781 | Msa0428390:intron | 40.0% | |
AGCACCTAATAGTTGTGAGA+AGG | - | chr3_2:79234982-79235001 | Msa0428390:intron | 40.0% | |
AGGTCCTTCTCACAACTATT+AGG | + | chr3_2:79234989-79235008 | None:intergenic | 40.0% | |
CAACTCTTTCATATGGGTCA+AGG | + | chr3_2:79235170-79235189 | None:intergenic | 40.0% | |
AAAACCCTCACAATTCTGCT+GGG | + | chr3_2:79235280-79235299 | None:intergenic | 40.0% | |
AAAAACCCTCACAATTCTGC+TGG | + | chr3_2:79235281-79235300 | None:intergenic | 40.0% | |
TCCCGAAATGAAATATCTGC+AGG | + | chr3_2:79235343-79235362 | None:intergenic | 40.0% | |
AAGCGTAGGTGATTCCAAAA+TGG | + | chr3_2:79235432-79235451 | None:intergenic | 40.0% | |
! | ACCTACGCTTTGAATTAGCT+TGG | - | chr3_2:79235442-79235461 | Msa0428390:intron | 40.0% |
ACCAAGCTAATTCAAAGCGT+AGG | + | chr3_2:79235446-79235465 | None:intergenic | 40.0% | |
CGAGCTGAAGAAAGGAAAAA+TGG | + | chr3_2:79235479-79235498 | None:intergenic | 40.0% | |
ATTAGAATTGCTGCTCGCTT+AGG | - | chr3_2:79235512-79235531 | Msa0428390:intron | 40.0% | |
AGATATACTTCTTCCCTTCC+AGG | - | chr3_2:79235780-79235799 | Msa0428390:intron | 40.0% | |
! | GTTTACACCGGAAAGTTTTC+TGG | - | chr3_2:79235962-79235981 | Msa0428390:intron | 40.0% |
CAGGATAACAAACAAGCTAC+TGG | + | chr3_2:79236023-79236042 | None:intergenic | 40.0% | |
! | GGAAGCACAACTTCATTTAC+AGG | + | chr3_2:79236042-79236061 | None:intergenic | 40.0% |
TATCGCATGTCCTTAAGTAG+TGG | + | chr3_2:79236170-79236189 | None:intergenic | 40.0% | |
! | ACAAGCCACCAAATCCTTTT+TGG | - | chr3_2:79236293-79236312 | Msa0428390:intron | 40.0% |
CTCAACCAAAAAGGATTTGG+TGG | + | chr3_2:79236301-79236320 | None:intergenic | 40.0% | |
ATAAGCTGCCATAACATGGA+CGG | + | chr3_2:79236608-79236627 | None:intergenic | 40.0% | |
TACCATAAGCTGCCATAACA+TGG | + | chr3_2:79236612-79236631 | None:intergenic | 40.0% | |
! | TTCCTTTTTGTGCATCTTGG+TGG | - | chr3_2:79236918-79236937 | Msa0428390:intron | 40.0% |
TACCACCAAGATGCACAAAA+AGG | + | chr3_2:79236923-79236942 | None:intergenic | 40.0% | |
!! | GTGCATCTTGGTGGTATTTT+TGG | - | chr3_2:79236927-79236946 | Msa0428390:intron | 40.0% |
!!! | TCTTGGTGGTATTTTTGGTG+TGG | - | chr3_2:79236932-79236951 | Msa0428390:intron | 40.0% |
!! | AGTGACTAGGAAAAAGCGTT+CGG | + | chr3_2:79237145-79237164 | None:intergenic | 40.0% |
ACACAACCTAGATCATAACG+AGG | + | chr3_2:79237176-79237195 | None:intergenic | 40.0% | |
AACCCAAAACAACAGAACAC+GGG | + | chr3_2:79237223-79237242 | None:intergenic | 40.0% | |
GAACCCAAAACAACAGAACA+CGG | + | chr3_2:79237224-79237243 | None:intergenic | 40.0% | |
CAACCTAAACACAGACCAAA+AGG | + | chr3_2:79237252-79237271 | None:intergenic | 40.0% | |
!! | TTAGGTTGATGCCAGTTTCT+TGG | - | chr3_2:79237264-79237283 | Msa0428390:CDS | 40.0% |
GTTGTCTTTGTCTCTTTCGT+TGG | - | chr3_2:79237304-79237323 | Msa0428390:CDS | 40.0% | |
!! | TTGTCTCTTTCGTTGGTTTG+TGG | - | chr3_2:79237311-79237330 | Msa0428390:CDS | 40.0% |
!! | TGTCTCTTTCGTTGGTTTGT+GGG | - | chr3_2:79237312-79237331 | Msa0428390:CDS | 40.0% |
! | TGGTTTGTGGGTAATTCTCA+AGG | - | chr3_2:79237324-79237343 | Msa0428390:CDS | 40.0% |
AACTCAAGCGTAAGATGTCA+CGG | + | chr3_2:79237404-79237423 | None:intergenic | 40.0% | |
!!! | GTGGTGTTTTGAAGTGTGTT+GGG | - | chr3_2:79237479-79237498 | Msa0428390:CDS | 40.0% |
!!! | TGGTGTTTTGAAGTGTGTTG+GGG | - | chr3_2:79237480-79237499 | Msa0428390:CDS | 40.0% |
!! | AGCTCTTGTTTGTGCTTTTC+TGG | - | chr3_2:79237628-79237647 | Msa0428390:intron | 40.0% |
!! | GCTCTTGTTTGTGCTTTTCT+GGG | - | chr3_2:79237629-79237648 | Msa0428390:intron | 40.0% |
! | GAGCCTTTTTCCGTTTGATT+TGG | - | chr3_2:79237700-79237719 | Msa0428390:CDS | 40.0% |
!!! | TCGTCTTACTTTTTGTGAGC+TGG | - | chr3_2:79237753-79237772 | Msa0428390:intron | 40.0% |
!!! | TTTTGTGAGCTGGTTTTCGA+TGG | - | chr3_2:79237763-79237782 | Msa0428390:intron | 40.0% |
!!! | TTTGTGAGCTGGTTTTCGAT+GGG | - | chr3_2:79237764-79237783 | Msa0428390:intron | 40.0% |
! | TTAGGTGGAGATTTGTTTGG+GGG | - | chr3_2:79238180-79238199 | Msa0428390:intron | 40.0% |
!!! | AGGGTGTTTTTAGGTGGTTA+TGG | - | chr3_2:79238215-79238234 | Msa0428390:intron | 40.0% |
CCAATGACGAAAACTGAGAA+AGG | + | chr3_2:79238902-79238921 | None:intergenic | 40.0% | |
! | CCTTTCTCAGTTTTCGTCAT+TGG | - | chr3_2:79238899-79238918 | Msa0428390:intron | 40.0% |
CACAAAGACTCAGAACAGTT+AGG | + | chr3_2:79238959-79238978 | None:intergenic | 40.0% | |
! | CTAACTGTTCTGAGTCTTTG+TGG | - | chr3_2:79238957-79238976 | Msa0428390:intron | 40.0% |
TTCTGAGTCTTTGTGGAACA+TGG | - | chr3_2:79238964-79238983 | Msa0428390:intron | 40.0% | |
!! | TTTAGCCTTGCAGTCCATAA+TGG | - | chr3_2:79239139-79239158 | Msa0428390:intron | 40.0% |
CCAACAAATTCCCACCATTA+TGG | + | chr3_2:79239156-79239175 | None:intergenic | 40.0% | |
! | CCATAATGGTGGGAATTTGT+TGG | - | chr3_2:79239153-79239172 | Msa0428390:intron | 40.0% |
CCAGAAGGATCTAACAATTC+AGG | + | chr3_2:79239229-79239248 | None:intergenic | 40.0% | |
CCTGAATTGTTAGATCCTTC+TGG | - | chr3_2:79239226-79239245 | Msa0428390:intron | 40.0% | |
TCCTTCTGGTATGAATGCAA+AGG | - | chr3_2:79239240-79239259 | Msa0428390:intron | 40.0% | |
! | TGGTATGAATGCAAAGGCAT+TGG | - | chr3_2:79239246-79239265 | Msa0428390:intron | 40.0% |
GATCTTGCAGAGTCTATTAG+AGG | - | chr3_2:79239283-79239302 | Msa0428390:intron | 40.0% | |
!! | ATCCTTAAAAAGTGCCCTCA+GGG | + | chr3_2:79239440-79239459 | None:intergenic | 40.0% |
!! | TATCCTTAAAAAGTGCCCTC+AGG | + | chr3_2:79239441-79239460 | None:intergenic | 40.0% |
CTTAACAAGTGCCCTAACTA+AGG | - | chr3_2:79239565-79239584 | Msa0428390:intron | 40.0% | |
! | ACTTCCATTTTCCTCTCCAA+TGG | - | chr3_2:79239705-79239724 | Msa0428390:intron | 40.0% |
TGGGTAAAACATGTAGAGAG+AGG | - | chr3_2:79239740-79239759 | Msa0428390:intron | 40.0% | |
GGGTAAAACATGTAGAGAGA+GGG | - | chr3_2:79239741-79239760 | Msa0428390:intron | 40.0% | |
TTAATGCCTGATCCTGATCT+TGG | + | chr3_2:79240103-79240122 | None:intergenic | 40.0% | |
GTGAGTGAGTTAAATGCCTT+GGG | + | chr3_2:79240343-79240362 | None:intergenic | 40.0% | |
TGTGAGTGAGTTAAATGCCT+TGG | + | chr3_2:79240344-79240363 | None:intergenic | 40.0% | |
!!! | GTTTTTGCCTTTTTGGGATG+GGG | + | chr3_2:79240419-79240438 | None:intergenic | 40.0% |
! | TTTGAAGCCAATGACCGTCA+TGG | + | chr3_2:79232472-79232491 | None:intergenic | 45.0% |
GACGAAGATGAAGAGTGGAT+TGG | + | chr3_2:79232503-79232522 | None:intergenic | 45.0% | |
CGAAGATATTGGAAGGGAGT+GGG | + | chr3_2:79232525-79232544 | None:intergenic | 45.0% | |
ACGAAGATATTGGAAGGGAG+TGG | + | chr3_2:79232526-79232545 | None:intergenic | 45.0% | |
! | ACCGCTACTATTTTCGTCTG+TGG | + | chr3_2:79232672-79232691 | None:intergenic | 45.0% |
ACAGACGAAAATAGTAGCGG+TGG | - | chr3_2:79232671-79232690 | Msa0428390:three_prime_UTR | 45.0% | |
GAAATGAGAAATCCCCTGCA+TGG | - | chr3_2:79232859-79232878 | Msa0428390:three_prime_UTR | 45.0% | |
TGCCTATCTTCTTCCATGCA+GGG | + | chr3_2:79232875-79232894 | None:intergenic | 45.0% | |
AAGATAGGCACCAAAGAGCT+TGG | - | chr3_2:79232885-79232904 | Msa0428390:three_prime_UTR | 45.0% | |
! | TGAGCCCATTTAGAACCTTC+CGG | + | chr3_2:79232941-79232960 | None:intergenic | 45.0% |
ACCCATGCTGCTACAATTGT+CGG | + | chr3_2:79233249-79233268 | None:intergenic | 45.0% | |
CGGACATAACACGTCATTCT+TGG | - | chr3_2:79233565-79233584 | Msa0428390:intron | 45.0% | |
AGTGGAGATCAGATGCATGA+AGG | + | chr3_2:79233675-79233694 | None:intergenic | 45.0% | |
TGAAGCGATCATCAAGCTTG+TGG | - | chr3_2:79233845-79233864 | Msa0428390:CDS | 45.0% | |
GAAGCGATCATCAAGCTTGT+GGG | - | chr3_2:79233846-79233865 | Msa0428390:CDS | 45.0% | |
AAGCGATCATCAAGCTTGTG+GGG | - | chr3_2:79233847-79233866 | Msa0428390:CDS | 45.0% | |
!! | AAAGAGATTGGCTTCCATCG+TGG | - | chr3_2:79234151-79234170 | Msa0428390:intron | 45.0% |
CGGACATAACACGTCATTCT+TGG | + | chr3_2:79233565-79233584 | None:intergenic | 45.0% | |
ACCTTGTAGGAGGTTGTGTA+CGG | - | chr3_2:79234418-79234437 | Msa0428390:intron | 45.0% | |
CCATGTGAACATGGCATATG+GGG | + | chr3_2:79234743-79234762 | None:intergenic | 45.0% | |
TAACACTGCTAGAGGCAAGA+AGG | - | chr3_2:79234934-79234953 | Msa0428390:intron | 45.0% | |
AACACTGCTAGAGGCAAGAA+GGG | - | chr3_2:79234935-79234954 | Msa0428390:intron | 45.0% | |
GTTGTGAGAAGGACCTTCTT+CGG | - | chr3_2:79234993-79235012 | Msa0428390:intron | 45.0% | |
AAGAAGACAACCGCACAAAC+TGG | + | chr3_2:79235065-79235084 | None:intergenic | 45.0% | |
TTGTGCGGTTGTCTTCTTTG+TGG | - | chr3_2:79235067-79235086 | Msa0428390:intron | 45.0% | |
TCTTTCCCAGCAGAATTGTG+AGG | - | chr3_2:79235272-79235291 | Msa0428390:intron | 45.0% | |
CTTTCCCAGCAGAATTGTGA+GGG | - | chr3_2:79235273-79235292 | Msa0428390:intron | 45.0% | |
GTAGAATGCGAGCTGAAGAA+AGG | + | chr3_2:79235487-79235506 | None:intergenic | 45.0% | |
GTTCTGGTGAAGCTTCTTTG+CGG | - | chr3_2:79235734-79235753 | Msa0428390:intron | 45.0% | |
!!! | GCTGCTTATTTTGCTCACCA+TGG | - | chr3_2:79235874-79235893 | Msa0428390:intron | 45.0% |
TTGCTCACCATGGATTTCGA+AGG | - | chr3_2:79235884-79235903 | Msa0428390:intron | 45.0% | |
TCACCATGGATTTCGAAGGA+GGG | - | chr3_2:79235888-79235907 | Msa0428390:intron | 45.0% | |
GATTTCGAAGGAGGGACAAA+AGG | - | chr3_2:79235896-79235915 | Msa0428390:intron | 45.0% | |
GTGGTAACCTCACTCTTTCA+CGG | - | chr3_2:79235938-79235957 | Msa0428390:intron | 45.0% | |
GTAAACTCCGTGAAAGAGTG+AGG | + | chr3_2:79235948-79235967 | None:intergenic | 45.0% | |
CTCTTTCACGGAGTTTACAC+CGG | - | chr3_2:79235950-79235969 | Msa0428390:intron | 45.0% | |
!! | ACAAGCTACTGGGTTAGCTT+AGG | + | chr3_2:79236012-79236031 | None:intergenic | 45.0% |
AGATCGTCCAAGTAGTGAGA+TGG | - | chr3_2:79236387-79236406 | Msa0428390:intron | 45.0% | |
GATCGTCCAAGTAGTGAGAT+GGG | - | chr3_2:79236388-79236407 | Msa0428390:intron | 45.0% | |
ATCGTCCAAGTAGTGAGATG+GGG | - | chr3_2:79236389-79236408 | Msa0428390:intron | 45.0% | |
GTCCATGTTATGGCAGCTTA+TGG | - | chr3_2:79236607-79236626 | Msa0428390:intron | 45.0% | |
! | AAAGGAGGCACGGAAGATAA+AGG | + | chr3_2:79236655-79236674 | None:intergenic | 45.0% |
! | CTTTGAAGATCACGTCAGTG+TGG | - | chr3_2:79236775-79236794 | Msa0428390:intron | 45.0% |
CACGTCAGTGTGGTATAAGA+TGG | - | chr3_2:79236785-79236804 | Msa0428390:intron | 45.0% | |
!! | GTGTAGTGTTGGTGTAGTGT+TGG | - | chr3_2:79236890-79236909 | Msa0428390:intron | 45.0% |
AACCCTTTCGGGCATTTATC+TGG | + | chr3_2:79236996-79237015 | None:intergenic | 45.0% | |
GATAAATGCCCGAAAGGGTT+TGG | - | chr3_2:79236996-79237015 | Msa0428390:intron | 45.0% | |
!! | GGACTGGTTGTTGTTTACTC+CGG | - | chr3_2:79237117-79237136 | Msa0428390:intron | 45.0% |
!!! | GAACGCTTTTTCCTAGTCAC+TGG | - | chr3_2:79237144-79237163 | Msa0428390:CDS | 45.0% |
TGGATGCCTCGTTATGATCT+AGG | - | chr3_2:79237167-79237186 | Msa0428390:CDS | 45.0% | |
!!! | TGCCCGTGTTCTGTTGTTTT+GGG | - | chr3_2:79237218-79237237 | Msa0428390:intron | 45.0% |
TTGATGCCAGTTTCTTGGTG+AGG | - | chr3_2:79237269-79237288 | Msa0428390:CDS | 45.0% | |
AAACCACCTCACCAAGAAAC+TGG | + | chr3_2:79237278-79237297 | None:intergenic | 45.0% | |
AGTTTCTTGGTGAGGTGGTT+TGG | - | chr3_2:79237277-79237296 | Msa0428390:CDS | 45.0% | |
!!! | GGTGGTGTTTTGAAGTGTGT+TGG | - | chr3_2:79237478-79237497 | Msa0428390:CDS | 45.0% |
!! | GGTGGTTGGTGTTTTAAGTG+TGG | - | chr3_2:79237534-79237553 | Msa0428390:CDS | 45.0% |
!! | GGTTGGTGTTTTAAGTGTGG+AGG | - | chr3_2:79237537-79237556 | Msa0428390:CDS | 45.0% |
!! | TGGTGTTTTAAGTGTGGAGG+TGG | - | chr3_2:79237540-79237559 | Msa0428390:CDS | 45.0% |
!! | GGTGTTTTAAGTGTGGAGGT+GGG | - | chr3_2:79237541-79237560 | Msa0428390:CDS | 45.0% |
TGTGGAGGTGGGTGTTTATT+GGG | - | chr3_2:79237552-79237571 | Msa0428390:intron | 45.0% | |
! | CTTGTTTGTGCTTTTCTGGG+CGG | - | chr3_2:79237632-79237651 | Msa0428390:intron | 45.0% |
!!! | AGGTGTTTTCGGTGTTATGG+AGG | - | chr3_2:79237658-79237677 | Msa0428390:intron | 45.0% |
!!! | GGTGTTTTCGGTGTTATGGA+GGG | - | chr3_2:79237659-79237678 | Msa0428390:intron | 45.0% |
GATCACGAAGCCAAATGAAC+CGG | + | chr3_2:79237790-79237809 | None:intergenic | 45.0% | |
! | GGTTCATTTGGCTTCGTGAT+CGG | - | chr3_2:79237789-79237808 | Msa0428390:intron | 45.0% |
! | GTTCATTTGGCTTCGTGATC+GGG | - | chr3_2:79237790-79237809 | Msa0428390:intron | 45.0% |
! | GGCTTTGTGTTGTGCTTTCT+CGG | - | chr3_2:79237974-79237993 | Msa0428390:intron | 45.0% |
TTTGTGTTGTGCTTTCTCGG+TGG | - | chr3_2:79237977-79237996 | Msa0428390:intron | 45.0% | |
GTGATAGCAGCTTGATCCTT+CGG | - | chr3_2:79238019-79238038 | Msa0428390:CDS | 45.0% | |
TTCGAAACGTGACTCAGCTT+GGG | - | chr3_2:79238052-79238071 | Msa0428390:CDS | 45.0% | |
! | TAGGTGGAGATTTGTTTGGG+GGG | - | chr3_2:79238181-79238200 | Msa0428390:intron | 45.0% |
CAAATGGGGCCGCATATATA+CGG | + | chr3_2:79238245-79238264 | None:intergenic | 45.0% | |
TTCATACCTTGCGTCTTGCA+GGG | - | chr3_2:79238277-79238296 | Msa0428390:intron | 45.0% | |
CCTCAGAAACAAAGGGAGAA+AGG | + | chr3_2:79238679-79238698 | None:intergenic | 45.0% | |
!! | CCTTTCTCCCTTTGTTTCTG+AGG | - | chr3_2:79238676-79238695 | Msa0428390:intron | 45.0% |
! | TCTCAGTTTTCGTCATTGGC+AGG | - | chr3_2:79238903-79238922 | Msa0428390:intron | 45.0% |
!! | AAGCATTGAGTGATCGACCA+AGG | - | chr3_2:79239095-79239114 | Msa0428390:intron | 45.0% |
! | AGCATTGAGTGATCGACCAA+GGG | - | chr3_2:79239096-79239115 | Msa0428390:intron | 45.0% |
TTGGAAGCAGTGAACATAGC+AGG | - | chr3_2:79239172-79239191 | Msa0428390:intron | 45.0% | |
TGGAAGCAGTGAACATAGCA+GGG | - | chr3_2:79239173-79239192 | Msa0428390:intron | 45.0% | |
GCCTTTGCATTCATACCAGA+AGG | + | chr3_2:79239244-79239263 | None:intergenic | 45.0% | |
!! | AATGCAAAGGCATTGGAAGC+TGG | - | chr3_2:79239253-79239272 | Msa0428390:intron | 45.0% |
!! | ATGCAAAGGCATTGGAAGCT+GGG | - | chr3_2:79239254-79239273 | Msa0428390:intron | 45.0% |
TGCTCACTAGGTCAGAATGA+GGG | + | chr3_2:79239372-79239391 | None:intergenic | 45.0% | |
ATGCTCACTAGGTCAGAATG+AGG | + | chr3_2:79239373-79239392 | None:intergenic | 45.0% | |
TTCTCGTGCAAACCATGTAC+TGG | + | chr3_2:79239642-79239661 | None:intergenic | 45.0% | |
! | AGTGCCATTGGAGAGGAAAA+TGG | + | chr3_2:79239712-79239731 | None:intergenic | 45.0% |
TCCAATGGCACTCACATTGA+TGG | - | chr3_2:79239720-79239739 | Msa0428390:intron | 45.0% | |
CCAATGGCACTCACATTGAT+GGG | - | chr3_2:79239721-79239740 | Msa0428390:intron | 45.0% | |
CGAATGTGTGAAAAGGAGTG+CGG | - | chr3_2:79239956-79239975 | Msa0428390:intron | 45.0% | |
GATCCTGATCTTGGTGAAGT+GGG | + | chr3_2:79240094-79240113 | None:intergenic | 45.0% | |
TGATCCTGATCTTGGTGAAG+TGG | + | chr3_2:79240095-79240114 | None:intergenic | 45.0% | |
ACTTCACCAAGATCAGGATC+AGG | - | chr3_2:79240094-79240113 | Msa0428390:intron | 45.0% | |
TCAGGCATTAAAGAGCAGCT+CGG | - | chr3_2:79240112-79240131 | Msa0428390:CDS | 45.0% | |
CTGTAAGTACCTCTCAGAGT+TGG | + | chr3_2:79240263-79240282 | None:intergenic | 45.0% | |
!! | CAACTCTGAGAGGTACTTAC+AGG | - | chr3_2:79240261-79240280 | Msa0428390:intron | 45.0% |
CTCACAAGCTACATAGCCAA+CGG | - | chr3_2:79240358-79240377 | Msa0428390:CDS | 45.0% | |
ACATAGCCAACGGATAGTGT+AGG | - | chr3_2:79240368-79240387 | Msa0428390:CDS | 45.0% | |
GATCTTCCTACACTATCCGT+TGG | + | chr3_2:79240377-79240396 | None:intergenic | 45.0% | |
AAAGTGACCCCATCCCAAAA+AGG | - | chr3_2:79240409-79240428 | Msa0428390:CDS | 45.0% | |
!!! | TTTTTTTTTTTTTTTTGAAT+CGG | + | chr3_2:79238323-79238342 | None:intergenic | 5.0% |
CAATGACCGTCATGGTCTCA+TGG | + | chr3_2:79232464-79232483 | None:intergenic | 50.0% | |
CATGAGACCATGACGGTCAT+TGG | - | chr3_2:79232462-79232481 | Msa0428390:three_prime_UTR | 50.0% | |
AGTGGGACGAAGATGAAGAG+TGG | + | chr3_2:79232508-79232527 | None:intergenic | 50.0% | |
GAAAATAGTAGCGGTGGCTG+TGG | - | chr3_2:79232677-79232696 | Msa0428390:three_prime_UTR | 50.0% | |
GGCGTCTCAATTCGTGAAGA+AGG | - | chr3_2:79232698-79232717 | Msa0428390:three_prime_UTR | 50.0% | |
TCCCCTGCATGGAAGAAGAT+AGG | - | chr3_2:79232870-79232889 | Msa0428390:three_prime_UTR | 50.0% | |
GCCTATCTTCTTCCATGCAG+GGG | + | chr3_2:79232874-79232893 | None:intergenic | 50.0% | |
GTGCCTATCTTCTTCCATGC+AGG | + | chr3_2:79232876-79232895 | None:intergenic | 50.0% | |
! | ATTTAGAACCTTCCGGGCAG+CGG | + | chr3_2:79232934-79232953 | None:intergenic | 50.0% |
!! | CTGCCCGGAAGGTTCTAAAT+GGG | - | chr3_2:79232934-79232953 | Msa0428390:CDS | 50.0% |
! | GAGCCCATTTAGAACCTTCC+GGG | + | chr3_2:79232940-79232959 | None:intergenic | 50.0% |
ATGCTGCTACAATTGTCGGG+GGG | + | chr3_2:79233245-79233264 | None:intergenic | 50.0% | |
CATGCTGCTACAATTGTCGG+GGG | + | chr3_2:79233246-79233265 | None:intergenic | 50.0% | |
CCATGCTGCTACAATTGTCG+GGG | + | chr3_2:79233247-79233266 | None:intergenic | 50.0% | |
CCCATGCTGCTACAATTGTC+GGG | + | chr3_2:79233248-79233267 | None:intergenic | 50.0% | |
CCCGACAATTGTAGCAGCAT+GGG | - | chr3_2:79233245-79233264 | Msa0428390:intron | 50.0% | |
GGAGCTTAAACTTCTGGCAG+TGG | + | chr3_2:79233693-79233712 | None:intergenic | 50.0% | |
! | ATGGTGGTGATATTGGGTCG+TGG | - | chr3_2:79234121-79234140 | Msa0428390:intron | 50.0% |
TGGTGATATTGGGTCGTGGT+TGG | - | chr3_2:79234125-79234144 | Msa0428390:intron | 50.0% | |
GGTGATATTGGGTCGTGGTT+GGG | - | chr3_2:79234126-79234145 | Msa0428390:intron | 50.0% | |
CGTGGTTGGGTGAAAGAGAT+TGG | - | chr3_2:79234139-79234158 | Msa0428390:intron | 50.0% | |
AATGCACAACACAGCCACGA+TGG | + | chr3_2:79234168-79234187 | None:intergenic | 50.0% | |
CCTTGTAGGAGGTTGTGTAC+GGG | - | chr3_2:79234419-79234438 | Msa0428390:intron | 50.0% | |
CCCCATATGCCATGTTCACA+TGG | - | chr3_2:79234740-79234759 | Msa0428390:intron | 50.0% | |
GGGTAGTGTACCAGTTTGTG+CGG | - | chr3_2:79235052-79235071 | Msa0428390:intron | 50.0% | |
!! | TTTTCAGGGAAGGCTCCTGA+TGG | - | chr3_2:79235687-79235706 | Msa0428390:intron | 50.0% |
CTCACCATGGATTTCGAAGG+AGG | - | chr3_2:79235887-79235906 | Msa0428390:intron | 50.0% | |
TGTCCCTCCTTCGAAATCCA+TGG | + | chr3_2:79235894-79235913 | None:intergenic | 50.0% | |
GTACGCACTACATGCAGCAT+AGG | - | chr3_2:79236197-79236216 | Msa0428390:intron | 50.0% | |
CAAGTAGTGAGATGGGGTGT+CGG | - | chr3_2:79236395-79236414 | Msa0428390:intron | 50.0% | |
! | AAGTAGTGAGATGGGGTGTC+GGG | - | chr3_2:79236396-79236415 | Msa0428390:intron | 50.0% |
GCTCCAAACCGTCCATGTTA+TGG | - | chr3_2:79236597-79236616 | Msa0428390:intron | 50.0% | |
CTGCCATAACATGGACGGTT+TGG | + | chr3_2:79236603-79236622 | None:intergenic | 50.0% | |
GGCATTTATCTGGCGACTCA+AGG | + | chr3_2:79236986-79237005 | None:intergenic | 50.0% | |
TCGCCAGATAAATGCCCGAA+AGG | - | chr3_2:79236990-79237009 | Msa0428390:intron | 50.0% | |
CGCCAGATAAATGCCCGAAA+GGG | - | chr3_2:79236991-79237010 | Msa0428390:intron | 50.0% | |
TCTACGCACCAAACCCTTTC+GGG | + | chr3_2:79237007-79237026 | None:intergenic | 50.0% | |
GTCTACGCACCAAACCCTTT+CGG | + | chr3_2:79237008-79237027 | None:intergenic | 50.0% | |
AACGACTACTACCGCCAACA+CGG | + | chr3_2:79237034-79237053 | None:intergenic | 50.0% | |
!! | AGGTCCCTTTTAGGTCGTGT+TGG | - | chr3_2:79237075-79237094 | Msa0428390:intron | 50.0% |
!! | TCCCTTTTAGGTCGTGTTGG+TGG | - | chr3_2:79237078-79237097 | Msa0428390:intron | 50.0% |
CCCACCAACACGACCTAAAA+GGG | + | chr3_2:79237082-79237101 | None:intergenic | 50.0% | |
!! | CCCTTTTAGGTCGTGTTGGT+GGG | - | chr3_2:79237079-79237098 | Msa0428390:intron | 50.0% |
GCTCTTGCCGTTATTTGGAC+TGG | - | chr3_2:79237101-79237120 | Msa0428390:intron | 50.0% | |
!! | TAGGAAAAAGCGTTCGGTGC+CGG | + | chr3_2:79237139-79237158 | None:intergenic | 50.0% |
!!! | CGCTTTTTCCTAGTCACTGG+TGG | - | chr3_2:79237147-79237166 | Msa0428390:CDS | 50.0% |
GTTGTGTTTCCGCTTCAGAG+CGG | - | chr3_2:79237189-79237208 | Msa0428390:intron | 50.0% | |
!! | CTGCCCGTGTTCTGTTGTTT+TGG | - | chr3_2:79237217-79237236 | Msa0428390:intron | 50.0% |
ATGCCAGTTTCTTGGTGAGG+TGG | - | chr3_2:79237272-79237291 | Msa0428390:CDS | 50.0% | |
! | TTCTTGGTGAGGTGGTTTGG+AGG | - | chr3_2:79237280-79237299 | Msa0428390:CDS | 50.0% |
TGTGTTGGGGTGATGTTGTG+TGG | - | chr3_2:79237493-79237512 | Msa0428390:CDS | 50.0% | |
TTGGGGTGATGTTGTGTGGT+GGG | - | chr3_2:79237497-79237516 | Msa0428390:CDS | 50.0% | |
!! | TGATGATGTGTGGTGGTGGT+TGG | - | chr3_2:79237520-79237539 | Msa0428390:CDS | 50.0% |
GTGTGGAGGTGGGTGTTTAT+TGG | - | chr3_2:79237551-79237570 | Msa0428390:CDS | 50.0% | |
GTGGAGGTGGGTGTTTATTG+GGG | - | chr3_2:79237553-79237572 | Msa0428390:intron | 50.0% | |
! | TGTGCTTTTCTGGGCGGTTT+AGG | - | chr3_2:79237638-79237657 | Msa0428390:intron | 50.0% |
! | CTGGGCGGTTTAGGTGTTTT+CGG | - | chr3_2:79237647-79237666 | Msa0428390:intron | 50.0% |
! | TTTCGATGGGCCGGTTCATT+TGG | - | chr3_2:79237777-79237796 | Msa0428390:intron | 50.0% |
! | TGGTTTTCTCTGGTGTACCG+AGG | - | chr3_2:79237851-79237870 | Msa0428390:CDS | 50.0% |
! | GGTTTTCTCTGGTGTACCGA+GGG | - | chr3_2:79237852-79237871 | Msa0428390:CDS | 50.0% |
GTTGTGCTTTCTCGGTGGAT+CGG | - | chr3_2:79237982-79238001 | Msa0428390:intron | 50.0% | |
AGCAGCTTGATCCTTCGGTT+AGG | - | chr3_2:79238024-79238043 | Msa0428390:CDS | 50.0% | |
!! | TTCGAAGAGCACCTAACCGA+AGG | + | chr3_2:79238038-79238057 | None:intergenic | 50.0% |
CTTCGAAACGTGACTCAGCT+TGG | - | chr3_2:79238051-79238070 | Msa0428390:CDS | 50.0% | |
TTGTGGGTGAGTAGTGACGA+TGG | - | chr3_2:79238111-79238130 | Msa0428390:CDS | 50.0% | |
TGTGGGTGAGTAGTGACGAT+GGG | - | chr3_2:79238112-79238131 | Msa0428390:CDS | 50.0% | |
!!! | GGTGGTGGATACCGTGTTTT+TGG | - | chr3_2:79238136-79238155 | Msa0428390:intron | 50.0% |
GTTCATACCTTGCGTCTTGC+AGG | - | chr3_2:79238276-79238295 | Msa0428390:intron | 50.0% | |
CTAAATGCAGCAACCACCAG+GGG | + | chr3_2:79239124-79239143 | None:intergenic | 50.0% | |
GCTAAATGCAGCAACCACCA+GGG | + | chr3_2:79239125-79239144 | None:intergenic | 50.0% | |
AGCCTTGCAGTCCATAATGG+TGG | - | chr3_2:79239142-79239161 | Msa0428390:intron | 50.0% | |
GCCTTGCAGTCCATAATGGT+GGG | - | chr3_2:79239143-79239162 | Msa0428390:intron | 50.0% | |
! | TCCCACCATTATGGACTGCA+AGG | + | chr3_2:79239147-79239166 | None:intergenic | 50.0% |
!! | TGCAAAGGCATTGGAAGCTG+GGG | - | chr3_2:79239255-79239274 | Msa0428390:intron | 50.0% |
ATGAGGGGCTTGAGGATAGT+CGG | + | chr3_2:79239356-79239375 | None:intergenic | 50.0% | |
GCTCACTAGGTCAGAATGAG+GGG | + | chr3_2:79239371-79239390 | None:intergenic | 50.0% | |
TCTTGCTAACAAGTGCCCTG+AGG | - | chr3_2:79239422-79239441 | Msa0428390:intron | 50.0% | |
CTTGCTAACAAGTGCCCTGA+GGG | - | chr3_2:79239423-79239442 | Msa0428390:intron | 50.0% | |
!!! | TGCCCTGAGGGCACTTTTTA+AGG | - | chr3_2:79239435-79239454 | Msa0428390:intron | 50.0% |
! | CAATGTGAGTGCCATTGGAG+AGG | + | chr3_2:79239719-79239738 | None:intergenic | 50.0% |
CCCATCAATGTGAGTGCCAT+TGG | + | chr3_2:79239724-79239743 | None:intergenic | 50.0% | |
! | GGGAGCGTGAAAATCACGAT+TGG | - | chr3_2:79239761-79239780 | Msa0428390:intron | 50.0% |
GTTCCCACTTCACCAAGATC+AGG | - | chr3_2:79240088-79240107 | Msa0428390:intron | 50.0% | |
AAAGAGCAGCTCGGTTTCAC+TGG | - | chr3_2:79240121-79240140 | Msa0428390:CDS | 50.0% | |
AAGAGCAGCTCGGTTTCACT+GGG | - | chr3_2:79240122-79240141 | Msa0428390:CDS | 50.0% | |
!! | TCACTGGGAGGCTAGTTTGA+AGG | - | chr3_2:79240137-79240156 | Msa0428390:CDS | 50.0% |
GGTCGAATTCCAACTCTGAG+AGG | - | chr3_2:79240251-79240270 | Msa0428390:intron | 50.0% | |
AGGGTTCGGGGGTTTAAGAG+AGG | + | chr3_2:79232382-79232401 | None:intergenic | 55.0% | |
TAGCTAGCGCATAGGGTTCG+GGG | + | chr3_2:79232394-79232413 | None:intergenic | 55.0% | |
CTAGCTAGCGCATAGGGTTC+GGG | + | chr3_2:79232395-79232414 | None:intergenic | 55.0% | |
GCTAGCTAGCGCATAGGGTT+CGG | + | chr3_2:79232396-79232415 | None:intergenic | 55.0% | |
ACCCTATGCGCTAGCTAGCT+CGG | - | chr3_2:79232397-79232416 | Msa0428390:three_prime_UTR | 55.0% | |
ACCGAGCTAGCTAGCGCATA+GGG | + | chr3_2:79232401-79232420 | None:intergenic | 55.0% | |
! | TTTAGAACCTTCCGGGCAGC+GGG | + | chr3_2:79232933-79232952 | None:intergenic | 55.0% |
!! | GCTGCCCGGAAGGTTCTAAA+TGG | - | chr3_2:79232933-79232952 | Msa0428390:CDS | 55.0% |
TGCTACAATTGTCGGGGGGA+TGG | + | chr3_2:79233241-79233260 | None:intergenic | 55.0% | |
CCCCGACAATTGTAGCAGCA+TGG | - | chr3_2:79233244-79233263 | Msa0428390:intron | 55.0% | |
CATGAAGGAGAGAGAGAGCG+AGG | + | chr3_2:79233660-79233679 | None:intergenic | 55.0% | |
GGAGGCGGAGCTTAAACTTC+TGG | + | chr3_2:79233699-79233718 | None:intergenic | 55.0% | |
CCCGTACACAACCTCCTACA+AGG | + | chr3_2:79234422-79234441 | None:intergenic | 55.0% | |
TGCTAGAGGCAAGAAGGGTG+TGG | - | chr3_2:79234940-79234959 | Msa0428390:intron | 55.0% | |
GTGAGAAGGACCTTCTTCGG+TGG | - | chr3_2:79234996-79235015 | Msa0428390:intron | 55.0% | |
CGACACCCCATCTCACTACT+TGG | + | chr3_2:79236397-79236416 | None:intergenic | 55.0% | |
GCCCACCAACACGACCTAAA+AGG | + | chr3_2:79237083-79237102 | None:intergenic | 55.0% | |
! | GGTGGGCTCTTGCCGTTATT+TGG | - | chr3_2:79237096-79237115 | Msa0428390:intron | 55.0% |
!! | CGCTTGAGTTTGCTGAACCG+TGG | - | chr3_2:79237414-79237433 | Msa0428390:intron | 55.0% |
!! | TTGCTGAACCGTGGTGTTGC+AGG | - | chr3_2:79237423-79237442 | Msa0428390:intron | 55.0% |
!! | TGCTGAACCGTGGTGTTGCA+GGG | - | chr3_2:79237424-79237443 | Msa0428390:intron | 55.0% |
!! | AGGGGTGGTGTTGTGTAGTG+AGG | - | chr3_2:79237443-79237462 | Msa0428390:intron | 55.0% |
!! | GGGGTGGTGTTGTGTAGTGA+GGG | - | chr3_2:79237444-79237463 | Msa0428390:intron | 55.0% |
!! | GTGGTGTTGTGTAGTGAGGG+TGG | - | chr3_2:79237447-79237466 | Msa0428390:intron | 55.0% |
! | GTAGTGAGGGTGGTGATGTG+TGG | - | chr3_2:79237457-79237476 | Msa0428390:intron | 55.0% |
GTTGGGGTGATGTTGTGTGG+TGG | - | chr3_2:79237496-79237515 | Msa0428390:CDS | 55.0% | |
!! | GTGTGGTGGGTGATGATGTG+TGG | - | chr3_2:79237510-79237529 | Msa0428390:CDS | 55.0% |
! | TGGTGGGTGATGATGTGTGG+TGG | - | chr3_2:79237513-79237532 | Msa0428390:CDS | 55.0% |
! | TGGGTGATGATGTGTGGTGG+TGG | - | chr3_2:79237516-79237535 | Msa0428390:CDS | 55.0% |
AGAGCTAGACACGACGAACG+AGG | + | chr3_2:79237614-79237633 | None:intergenic | 55.0% | |
!!! | TGAGCTGGTTTTCGATGGGC+CGG | - | chr3_2:79237768-79237787 | Msa0428390:intron | 55.0% |
TTGGCTTCGTGATCGGGAGT+CGG | - | chr3_2:79237796-79237815 | Msa0428390:intron | 55.0% | |
TCGGGGTCTAGCTGCAATCT+TGG | - | chr3_2:79237815-79237834 | Msa0428390:intron | 55.0% | |
ACGTGACTCAGCTTGGGTGA+TGG | - | chr3_2:79238058-79238077 | Msa0428390:CDS | 55.0% | |
!! | TCAGCTTGGGTGATGGAGTC+TGG | - | chr3_2:79238065-79238084 | Msa0428390:CDS | 55.0% |
!! | CAGCTTGGGTGATGGAGTCT+GGG | - | chr3_2:79238066-79238085 | Msa0428390:CDS | 55.0% |
GGCTAAATGCAGCAACCACC+AGG | + | chr3_2:79239126-79239145 | None:intergenic | 55.0% | |
!! | AGGCATTGGAAGCTGGGGTT+AGG | - | chr3_2:79239260-79239279 | Msa0428390:intron | 55.0% |
! | GGCATTGGAAGCTGGGGTTA+GGG | - | chr3_2:79239261-79239280 | Msa0428390:intron | 55.0% |
AGGTCAGAATGAGGGGCTTG+AGG | + | chr3_2:79239364-79239383 | None:intergenic | 55.0% | |
!! | GGAAGGGTACTACTCTGCTC+TGG | - | chr3_2:79240315-79240334 | Msa0428390:intron | 55.0% |
AGCTAGCGCATAGGGTTCGG+GGG | + | chr3_2:79232393-79232412 | None:intergenic | 60.0% | |
CACCGAGCTAGCTAGCGCAT+AGG | + | chr3_2:79232402-79232421 | None:intergenic | 60.0% | |
CAAGCTTGTGGGGAGCAGTG+AGG | - | chr3_2:79233857-79233876 | Msa0428390:CDS | 60.0% | |
!! | TGAGATGGGGTGTCGGGCTA+TGG | - | chr3_2:79236402-79236421 | Msa0428390:intron | 60.0% |
! | CGAGGCATCCACCAGTGACT+AGG | + | chr3_2:79237158-79237177 | None:intergenic | 60.0% |
!! | GCTGAACCGTGGTGTTGCAG+GGG | - | chr3_2:79237425-79237444 | Msa0428390:intron | 60.0% |
ACACCACCCCTGCAACACCA+CGG | + | chr3_2:79237434-79237453 | None:intergenic | 60.0% | |
! | GTGAGGGTGGTGATGTGTGG+TGG | - | chr3_2:79237460-79237479 | Msa0428390:intron | 60.0% |
TGGCTTCGTGATCGGGAGTC+GGG | - | chr3_2:79237797-79237816 | Msa0428390:intron | 60.0% | |
!!! | CGAGGGGTGCCCTGCTATTT+TGG | - | chr3_2:79237875-79237894 | Msa0428390:CDS | 60.0% |
GTGCTTTCTCGGTGGATCGG+AGG | - | chr3_2:79237985-79238004 | Msa0428390:intron | 60.0% | |
GGGTGAGTAGTGACGATGGG+CGG | - | chr3_2:79238115-79238134 | Msa0428390:CDS | 60.0% | |
TGAGTAGTGACGATGGGCGG+TGG | - | chr3_2:79238118-79238137 | Msa0428390:CDS | 60.0% | |
CGTCATCCCTGCAAGACGCA+AGG | + | chr3_2:79238286-79238305 | None:intergenic | 60.0% | |
TGATCGACCAAGGGATCCCC+TGG | - | chr3_2:79239105-79239124 | Msa0428390:intron | 60.0% | |
AGCAGCTCGGTTTCACTGGG+AGG | - | chr3_2:79240125-79240144 | Msa0428390:CDS | 60.0% | |
CTACTCTGCTCTGGCACCCA+AGG | - | chr3_2:79240324-79240343 | Msa0428390:intron | 60.0% | |
!! | GGTCGGTGATGAGCACCGAG+AGG | + | chr3_2:79233772-79233791 | None:intergenic | 65.0% |
GCTTGTGGGGAGCAGTGAGG+CGG | - | chr3_2:79233860-79233879 | Msa0428390:CDS | 65.0% | |
GGTGCGTAGACGCTCCGTGT+TGG | - | chr3_2:79237017-79237036 | Msa0428390:intron | 65.0% | |
GCGTAGACGCTCCGTGTTGG+CGG | - | chr3_2:79237020-79237039 | Msa0428390:intron | 65.0% | |
!! | GAACCGTGGTGTTGCAGGGG+TGG | - | chr3_2:79237428-79237447 | Msa0428390:intron | 65.0% |
GGCTTCGTGATCGGGAGTCG+GGG | - | chr3_2:79237798-79237817 | Msa0428390:intron | 65.0% | |
TCTCTGGTGTACCGAGGGCG+AGG | - | chr3_2:79237857-79237876 | Msa0428390:CDS | 65.0% | |
CTCTGGTGTACCGAGGGCGA+GGG | - | chr3_2:79237858-79237877 | Msa0428390:CDS | 65.0% | |
TCTGGTGTACCGAGGGCGAG+GGG | - | chr3_2:79237859-79237878 | Msa0428390:CDS | 65.0% | |
TCGGTGGATCGGAGGTCGTG+AGG | - | chr3_2:79237993-79238012 | Msa0428390:intron | 65.0% | |
GTAGTGACGATGGGCGGTGG+TGG | - | chr3_2:79238121-79238140 | Msa0428390:CDS | 65.0% | |
TCGACCAAGGGATCCCCTGG+TGG | - | chr3_2:79239108-79239127 | Msa0428390:intron | 65.0% | |
GCAACCACCAGGGGATCCCT+TGG | + | chr3_2:79239115-79239134 | None:intergenic | 65.0% | |
CGTCCATTGGACCCGCTGCC+CGG | - | chr3_2:79232919-79232938 | Msa0428390:CDS | 70.0% | |
CTTCCGGGCAGCGGGTCCAA+TGG | + | chr3_2:79232925-79232944 | None:intergenic | 70.0% | |
CATTGGACCCGCTGCCCGGA+AGG | - | chr3_2:79232923-79232942 | Msa0428390:CDS | 70.0% | |
!! | TGGGGTGTCGGGCTATGGCG+AGG | - | chr3_2:79236407-79236426 | Msa0428390:intron | 70.0% |
!! | GCAGCGACGCCGCTCTGAAG+CGG | + | chr3_2:79237201-79237220 | None:intergenic | 70.0% |
! | AGCAGGGCACCCCTCGCCCT+CGG | + | chr3_2:79237871-79237890 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 79232378 | 79240687 | 79232378 | ID=Msa0428390;Name=Msa0428390 |
chr3_2 | mRNA | 79232378 | 79240687 | 79232378 | ID=Msa0428390-mRNA-1;Parent=Msa0428390;Name=Msa0428390-mRNA-1;_AED=0.15;_eAED=0.15;_QI=93|0.85|0.86|1|0.85|0.8|15|503|496 |
chr3_2 | exon | 79232378 | 79232537 | 79232378 | ID=Msa0428390-mRNA-1:exon:21307;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79232571 | 79233153 | 79232571 | ID=Msa0428390-mRNA-1:exon:21306;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79233789 | 79233993 | 79233789 | ID=Msa0428390-mRNA-1:exon:21305;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79236437 | 79236498 | 79236437 | ID=Msa0428390-mRNA-1:exon:21304;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79237132 | 79237191 | 79237132 | ID=Msa0428390-mRNA-1:exon:21303;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79237264 | 79237371 | 79237264 | ID=Msa0428390-mRNA-1:exon:21302;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79237461 | 79237570 | 79237461 | ID=Msa0428390-mRNA-1:exon:21301;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79237695 | 79237740 | 79237695 | ID=Msa0428390-mRNA-1:exon:21300;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79237832 | 79237904 | 79237832 | ID=Msa0428390-mRNA-1:exon:21299;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79238012 | 79238142 | 79238012 | ID=Msa0428390-mRNA-1:exon:21298;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79238286 | 79238369 | 79238286 | ID=Msa0428390-mRNA-1:exon:21297;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79238562 | 79238659 | 79238562 | ID=Msa0428390-mRNA-1:exon:21296;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79240096 | 79240206 | 79240096 | ID=Msa0428390-mRNA-1:exon:21295;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79240355 | 79240439 | 79240355 | ID=Msa0428390-mRNA-1:exon:21294;Parent=Msa0428390-mRNA-1 |
chr3_2 | exon | 79240517 | 79240687 | 79240517 | ID=Msa0428390-mRNA-1:exon:21293;Parent=Msa0428390-mRNA-1 |
chr3_2 | five_prime_UTR | 79240595 | 79240687 | 79240595 | ID=Msa0428390-mRNA-1:five_prime_utr;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79240517 | 79240594 | 79240517 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79240355 | 79240439 | 79240355 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79240096 | 79240206 | 79240096 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79238562 | 79238659 | 79238562 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79238286 | 79238369 | 79238286 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79238012 | 79238142 | 79238012 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79237832 | 79237904 | 79237832 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79237695 | 79237740 | 79237695 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79237461 | 79237570 | 79237461 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79237264 | 79237371 | 79237264 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79237132 | 79237191 | 79237132 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79236437 | 79236498 | 79236437 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79233789 | 79233993 | 79233789 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | CDS | 79232914 | 79233153 | 79232914 | ID=Msa0428390-mRNA-1:cds;Parent=Msa0428390-mRNA-1 |
chr3_2 | three_prime_UTR | 79232571 | 79232913 | 79232571 | ID=Msa0428390-mRNA-1:three_prime_utr;Parent=Msa0428390-mRNA-1 |
chr3_2 | three_prime_UTR | 79232378 | 79232537 | 79232378 | ID=Msa0428390-mRNA-1:three_prime_utr;Parent=Msa0428390-mRNA-1 |
Gene Sequence |
Protein sequence |