AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0437640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0437640 MtrunA17_Chr3g0105891 97.797 590 11 2 1 590 1 588 0.0 1197
Msa0437640 MtrunA17_Chr5g0431191 68.657 603 164 8 1 590 1 591 0.0 813
Msa0437640 MtrunA17_Chr3g0143531 37.705 244 141 6 343 583 40 275 1.68e-49 173
Msa0437640 MtrunA17_Chr1g0211611 33.942 274 168 6 314 582 285 550 2.49e-49 180
Msa0437640 MtrunA17_Chr5g0406251 31.507 292 181 6 304 582 259 544 5.86e-47 173
Msa0437640 MtrunA17_Chr1g0202101 34.363 259 158 6 325 578 276 527 1.11e-45 169
Msa0437640 MtrunA17_Chr3g0090261 31.058 293 186 6 300 582 50 336 7.47e-44 160
Msa0437640 MtrunA17_Chr4g0059121 31.452 248 154 7 343 582 73 312 5.31e-38 144
Msa0437640 MtrunA17_Chr4g0075541 29.655 290 177 9 309 584 67 343 8.05e-38 144
Msa0437640 MtrunA17_Chr3g0117731 30.233 258 164 7 333 582 62 311 1.35e-37 142
Msa0437640 MtrunA17_Chr2g0282321 27.599 279 182 7 317 582 146 417 1.98e-36 142
Msa0437640 MtrunA17_Chr4g0047211 28.014 282 180 9 314 582 24 295 1.50e-34 134
Msa0437640 MtrunA17_Chr4g0047191 28.014 282 180 9 314 582 29 300 1.63e-34 134
Msa0437640 MtrunA17_Chr3g0117811 28.409 264 161 5 343 582 75 334 7.87e-34 132
Msa0437640 MtrunA17_Chr4g0047201 28.846 260 169 7 332 582 204 456 1.35e-33 134
Msa0437640 MtrunA17_Chr4g0059181 29.167 264 159 6 343 582 104 363 3.33e-33 131
Msa0437640 MtrunA17_Chr1g0205071 27.170 265 164 4 343 582 93 353 2.12e-32 128
Msa0437640 MtrunA17_Chr1g0157231 29.752 242 154 6 325 557 139 373 2.75e-32 128
Msa0437640 MtrunA17_Chr8g0388891 29.818 275 152 7 320 582 121 366 1.18e-31 127
Msa0437640 MtrunA17_Chr5g0394681 25.685 292 181 5 323 582 74 361 1.50e-31 126
Msa0437640 MtrunA17_Chr6g0449241 30.216 278 170 9 324 584 18 288 7.01e-31 123
Msa0437640 MtrunA17_Chr6g0450871 33.514 185 117 2 400 582 166 346 1.42e-30 123
Msa0437640 MtrunA17_Chr7g0244621 31.600 250 158 7 343 582 60 306 7.91e-30 120
Msa0437640 MtrunA17_Chr3g0116981 28.467 274 178 8 324 583 18 287 2.19e-29 119
Msa0437640 MtrunA17_Chr4g0068411 28.854 253 168 5 330 575 458 705 5.36e-29 122
Msa0437640 MtrunA17_Chr2g0305141 31.559 263 157 10 332 578 1087 1342 1.60e-28 121
Msa0437640 MtrunA17_Chr4g0072741 30.612 294 175 12 307 578 808 1094 7.53e-28 119
Msa0437640 MtrunA17_Chr2g0294351 27.636 275 186 6 315 582 450 718 5.48e-27 116
Msa0437640 MtrunA17_Chr2g0310761 32.000 250 151 9 343 578 954 1198 1.20e-26 115
Msa0437640 MtrunA17_Chr4g0065211 30.556 252 152 10 343 578 1136 1380 1.94e-26 115
Msa0437640 MtrunA17_Chr5g0427651 29.412 272 169 10 325 582 638 900 3.67e-26 114
Msa0437640 MtrunA17_Chr6g0461841 31.061 264 165 10 332 582 971 1230 4.22e-26 114
Msa0437640 MtrunA17_Chr8g0357611 31.102 254 156 9 343 582 1385 1633 4.73e-26 114
Msa0437640 MtrunA17_Chr1g0196631 31.227 269 161 10 343 590 915 1180 1.35e-25 112
Msa0437640 MtrunA17_Chr2g0310781 30.709 254 157 9 343 582 860 1108 5.66e-25 110
Msa0437640 MtrunA17_Chr1g0151541 24.113 282 202 5 310 584 641 917 1.17e-23 106
Msa0437640 MtrunA17_Chr8g0392871 24.723 271 190 7 320 582 727 991 1.72e-23 105
Msa0437640 MtrunA17_Chr3g0132791 26.937 271 181 8 325 584 645 909 1.83e-23 105
Msa0437640 MtrunA17_Chr4g0042731 28.261 276 172 12 325 582 134 401 3.02e-22 99.8
Msa0437640 MtrunA17_Chr6g0482711 24.354 271 191 7 320 582 648 912 3.18e-22 101
Msa0437640 MtrunA17_Chr1g0171451 25.581 301 196 11 301 582 377 668 8.22e-22 99.8
Msa0437640 MtrunA17_Chr1g0191171 24.915 293 204 9 301 585 659 943 9.28e-22 100
Msa0437640 MtrunA17_Chr5g0397931 25.573 262 181 7 330 583 421 676 2.88e-21 98.2
Msa0437640 MtrunA17_Chr3g0136131 25.172 290 185 10 318 582 73 355 5.66e-21 95.1
Msa0437640 MtrunA17_Chr1g0179331 28.070 228 147 8 367 585 596 815 7.02e-21 97.4
Msa0437640 MtrunA17_Chr5g0403721 26.364 220 149 8 370 583 31 243 7.39e-21 94.4
Msa0437640 MtrunA17_Chr2g0284901 26.882 279 179 12 319 582 140 408 5.60e-20 93.2
Msa0437640 MtrunA17_Chr4g0041201 27.106 273 160 10 332 583 542 796 1.29e-18 90.1
Msa0437640 MtrunA17_Chr8g0380551 26.549 226 149 6 369 582 265 485 3.12e-18 88.2
Msa0437640 MtrunA17_Chr6g0455651 27.509 269 156 11 334 578 118 371 7.51e-18 86.3
Msa0437640 MtrunA17_Chr5g0443471 24.306 288 187 11 321 588 154 430 1.52e-17 85.5
Msa0437640 MtrunA17_Chr4g0000431 28.261 230 144 9 360 579 62 280 2.28e-17 85.9
Msa0437640 MtrunA17_Chr8g0340911 25.547 274 172 9 334 582 569 835 2.43e-17 86.3
Msa0437640 MtrunA17_Chr5g0424501 24.812 266 181 7 324 579 184 440 2.67e-17 84.7
Msa0437640 MtrunA17_Chr8g0384301 25.214 234 167 5 349 579 322 550 2.76e-17 85.5
Msa0437640 MtrunA17_Chr3g0130151 24.786 234 168 5 349 579 267 495 3.62e-17 85.1
Msa0437640 MtrunA17_Chr2g0325851 26.277 274 161 11 332 583 552 806 7.97e-17 84.3
Msa0437640 MtrunA17_Chr3g0091461 27.881 269 162 10 343 590 819 1076 8.19e-17 84.7
Msa0437640 MtrunA17_Chr3g0115171 25.551 227 160 7 361 585 320 539 9.07e-17 83.6
Msa0437640 MtrunA17_Chr7g0250931 25.614 285 171 10 333 585 550 825 1.01e-16 84.0
Msa0437640 MtrunA17_Chr5g0424581 23.684 266 184 8 324 579 117 373 1.05e-16 82.4
Msa0437640 MtrunA17_Chr5g0424651 23.684 266 184 8 324 579 313 569 1.83e-16 82.8
Msa0437640 MtrunA17_Chr7g0237401 29.259 270 151 11 343 582 108 367 3.80e-16 81.3
Msa0437640 MtrunA17_Chr1g0201241 25.000 260 164 7 349 583 746 999 4.18e-16 82.4
Msa0437640 MtrunA17_Chr1g0158771 30.144 209 122 9 333 525 290 490 5.48e-16 81.3
Msa0437640 MtrunA17_Chr6g0450571 26.818 220 145 7 370 579 59 272 6.56e-16 81.3
Msa0437640 MtrunA17_Chr5g0424531 24.312 218 158 5 362 579 54 264 2.15e-15 77.0
Msa0437640 MtrunA17_Chr1g0202831 26.131 199 140 4 382 579 470 662 3.79e-15 79.0
Msa0437640 MtrunA17_Chr4g0051191 26.244 221 154 7 359 578 199 411 5.52e-15 77.4
Msa0437640 MtrunA17_Chr4g0038091 25.385 260 170 7 334 580 22 270 5.62e-15 79.0
Msa0437640 MtrunA17_Chr4g0038501 25.000 260 171 7 334 580 22 270 1.13e-14 77.8
Msa0437640 MtrunA17_Chr5g0439601 21.569 306 181 11 328 586 309 602 2.86e-14 75.9
Msa0437640 MtrunA17_Chr8g0347481 25.738 237 149 9 370 582 272 505 3.19e-14 75.9
Msa0437640 MtrunA17_Chr2g0317001 24.286 210 154 4 370 579 58 262 3.69e-14 75.9
Msa0437640 MtrunA17_Chr4g0063691 27.273 209 132 9 327 522 533 734 3.82e-14 75.9
Msa0437640 MtrunA17_Chr8g0340891 25.180 278 169 10 334 582 567 834 3.85e-14 75.9
Msa0437640 MtrunA17_Chr2g0299991 23.671 207 141 5 387 579 126 329 4.93e-14 73.9
Msa0437640 MtrunA17_Chr1g0157871 27.619 210 126 9 333 525 262 462 6.31e-14 74.7
Msa0437640 MtrunA17_Chr5g0441021 29.204 226 128 8 382 582 133 351 6.63e-14 73.9
Msa0437640 MtrunA17_Chr1g0188991 23.552 259 177 9 336 579 19 271 1.05e-13 74.3
Msa0437640 MtrunA17_Chr6g0467641 28.095 210 125 9 333 525 194 394 1.19e-13 73.6
Msa0437640 MtrunA17_Chr3g0123141 26.961 204 130 8 334 525 610 806 1.31e-13 74.3
Msa0437640 MtrunA17_Chr1g0205931 24.151 265 170 8 336 579 59 313 1.44e-13 73.9
Msa0437640 MtrunA17_Chr8g0359651 30.303 198 112 10 343 524 678 865 1.51e-13 73.9
Msa0437640 MtrunA17_Chr1g0191631 30.570 193 119 6 343 526 166 352 1.60e-13 73.2
Msa0437640 MtrunA17_Chr3g0080881 26.136 264 161 9 343 584 89 340 1.73e-13 72.4
Msa0437640 MtrunA17_Chr2g0318171 28.846 208 127 9 334 528 483 682 2.33e-13 73.2
Msa0437640 MtrunA17_Chr7g0272841 25.000 224 157 5 361 579 109 326 2.40e-13 73.2
Msa0437640 MtrunA17_Chr1g0158611 24.878 205 134 8 334 524 53 251 2.56e-13 71.6
Msa0437640 MtrunA17_Chr1g0157901 30.588 170 97 7 371 525 10 173 3.07e-13 70.5
Msa0437640 MtrunA17_Chr5g0423891 25.088 283 166 12 333 582 164 433 3.11e-13 72.4
Msa0437640 MtrunA17_Chr1g0158651 25.962 208 130 9 334 525 309 508 3.18e-13 72.8
Msa0437640 MtrunA17_Chr8g0359641 30.303 198 112 10 343 524 678 865 3.72e-13 72.8
Msa0437640 MtrunA17_Chr5g0396901 25.000 268 160 10 347 582 289 547 4.41e-13 72.4
Msa0437640 MtrunA17_Chr2g0278891 24.444 225 147 6 322 529 281 499 5.50e-13 72.0
Msa0437640 MtrunA17_Chr8g0362661 28.125 224 132 9 382 582 197 414 7.46e-13 71.2
Msa0437640 MtrunA17_Chr4g0058561 28.409 264 158 10 343 583 371 626 7.91e-13 71.2
Msa0437640 MtrunA17_Chr5g0439621 22.154 325 182 11 319 584 415 727 8.15e-13 71.6
Msa0437640 MtrunA17_Chr8g0370461 27.556 225 134 8 382 582 155 374 8.86e-13 70.5
Msa0437640 MtrunA17_Chr3g0137741 28.846 208 127 9 334 528 494 693 1.15e-12 71.2
Msa0437640 MtrunA17_Chr1g0158531 31.138 167 90 8 376 525 333 491 1.23e-12 70.9
Msa0437640 MtrunA17_Chr1g0160681 29.048 210 121 11 334 525 67 266 1.31e-12 69.7
Msa0437640 MtrunA17_Chr5g0413071 23.939 330 187 13 298 580 271 583 1.37e-12 70.5
Msa0437640 MtrunA17_Chr1g0149381 28.571 210 124 10 334 528 504 702 1.54e-12 70.9
Msa0437640 MtrunA17_Chr1g0158511 27.053 207 131 8 333 525 279 479 1.77e-12 70.1
Msa0437640 MtrunA17_Chr4g0047561 25.701 214 139 7 327 527 42 248 2.27e-12 68.9
Msa0437640 MtrunA17_Chr1g0212821 23.860 285 175 11 334 585 84 359 2.80e-12 68.9
Msa0437640 MtrunA17_Chr1g0158321 28.293 205 131 7 333 525 35 235 3.00e-12 68.2
Msa0437640 MtrunA17_Chr5g0439561 23.282 262 161 8 349 582 361 610 3.19e-12 69.3
Msa0437640 MtrunA17_Chr7g0251071 24.476 286 173 12 334 585 355 631 3.19e-12 69.3
Msa0437640 MtrunA17_Chr2g0284101 26.692 266 161 11 343 582 314 571 3.24e-12 69.3
Msa0437640 MtrunA17_Chr1g0160581 27.885 208 126 10 334 525 307 506 3.71e-12 69.3
Msa0437640 MtrunA17_Chr1g0189791 26.394 269 160 10 343 582 86 345 4.26e-12 68.9
Msa0437640 MtrunA17_Chr6g0487571 25.641 273 150 12 349 582 593 851 4.30e-12 69.3
Msa0437640 MtrunA17_Chr1g0157781 26.214 206 132 8 334 525 305 504 5.39e-12 68.6
Msa0437640 MtrunA17_Chr8g0340871 23.810 273 174 10 334 580 578 842 6.02e-12 68.9
Msa0437640 MtrunA17_Chr5g0439591 24.645 211 136 8 328 527 67 265 7.04e-12 67.4
Msa0437640 MtrunA17_Chr8g0341361 25.000 232 133 8 377 579 236 455 7.82e-12 67.8
Msa0437640 MtrunA17_Chr1g0213991 31.553 206 115 11 343 533 112 306 7.91e-12 67.8
Msa0437640 MtrunA17_Chr1g0158711 26.442 208 131 9 333 525 262 462 8.11e-12 68.2
Msa0437640 MtrunA17_Chr2g0312571 23.345 287 179 10 328 582 42 319 8.35e-12 67.8
Msa0437640 MtrunA17_Chr1g0181821 31.551 187 108 9 352 527 100 277 9.03e-12 67.0
Msa0437640 MtrunA17_Chr1g0157801 26.214 206 132 8 334 525 300 499 9.34e-12 67.8
Msa0437640 MtrunA17_Chr6g0467281 25.249 301 178 14 315 582 475 761 9.78e-12 68.2
Msa0437640 MtrunA17_Chr7g0217041 27.717 184 121 6 349 525 547 725 1.04e-11 68.2
Msa0437640 MtrunA17_Chr7g0250741 23.592 284 177 11 334 585 536 811 1.06e-11 68.2
Msa0437640 MtrunA17_Chr2g0324931 29.536 237 142 10 308 525 664 894 1.08e-11 68.2
Msa0437640 MtrunA17_Chr7g0238401 25.616 203 128 8 334 522 349 542 1.20e-11 67.8
Msa0437640 MtrunA17_Chr2g0286281 32.370 173 95 8 367 527 130 292 1.21e-11 67.4
Msa0437640 MtrunA17_Chr1g0158761 27.317 205 127 8 334 523 336 533 1.26e-11 67.4
Msa0437640 MtrunA17_Chr1g0164561 24.074 216 137 3 396 584 4 219 1.42e-11 64.7
Msa0437640 MtrunA17_Chr4g0023071 24.364 275 174 10 334 582 498 764 1.55e-11 67.4
Msa0437640 MtrunA17_Chr6g0475201 25.194 258 162 9 349 582 597 847 1.61e-11 67.4
Msa0437640 MtrunA17_Chr5g0445271 25.333 225 155 8 360 579 64 280 1.79e-11 65.5
Msa0437640 MtrunA17_Chr1g0148501 26.054 261 159 10 343 578 445 696 1.85e-11 67.0
Msa0437640 MtrunA17_Chr7g0251001 24.739 287 171 13 334 585 61 337 1.85e-11 66.2
Msa0437640 MtrunA17_Chr8g0364671 25.888 197 125 8 343 527 78 265 1.90e-11 65.9
Msa0437640 MtrunA17_Chr1g0209511 24.382 283 172 11 334 582 319 593 2.27e-11 66.6
Msa0437640 MtrunA17_Chr1g0209471 26.570 207 127 8 334 522 65 264 2.43e-11 65.9
Msa0437640 MtrunA17_Chr2g0314611 29.703 202 124 10 337 528 493 686 2.48e-11 66.6
Msa0437640 MtrunA17_Chr4g0071221 22.712 295 185 12 320 582 530 813 2.59e-11 66.6
Msa0437640 MtrunA17_Chr3g0088321 28.846 208 119 10 334 523 55 251 2.61e-11 65.9
Msa0437640 MtrunA17_Chr2g0281971 24.299 214 142 7 327 527 44 250 2.66e-11 65.5
Msa0437640 MtrunA17_Chr5g0447731 25.481 208 143 7 377 579 76 276 2.83e-11 64.7
Msa0437640 MtrunA17_Chr3g0133541 21.395 215 161 5 370 580 354 564 2.93e-11 66.6
Msa0437640 MtrunA17_Chr7g0232421 26.923 208 125 9 334 522 65 264 2.99e-11 65.5
Msa0437640 MtrunA17_Chr8g0340721 23.143 350 206 15 282 579 298 636 3.36e-11 66.2
Msa0437640 MtrunA17_Chr3g0134291 27.778 252 139 12 318 540 494 731 3.40e-11 66.2
Msa0437640 MtrunA17_Chr1g0154511 24.153 236 145 9 382 589 388 617 3.42e-11 66.2
Msa0437640 MtrunA17_Chr7g0232441 23.488 281 176 10 334 582 325 598 3.55e-11 66.2
Msa0437640 MtrunA17_Chr4g0018701 25.764 229 148 8 312 525 700 921 3.56e-11 66.6
Msa0437640 MtrunA17_Chr1g0160771 28.708 209 123 10 334 525 303 502 3.66e-11 65.9
Msa0437640 MtrunA17_Chr4g0030301 26.549 226 139 8 377 582 29 247 3.69e-11 64.3
Msa0437640 MtrunA17_Chr0c04g0492031 27.778 252 139 12 318 540 494 731 3.77e-11 66.2
Msa0437640 MtrunA17_Chr8g0340931 24.364 275 174 9 334 582 569 835 3.79e-11 66.2
Msa0437640 MtrunA17_Chr0c04g0492001 27.778 252 139 12 318 540 494 731 3.80e-11 66.2
Msa0437640 MtrunA17_Chr1g0160731 26.699 206 131 9 334 525 299 498 3.87e-11 65.9
Msa0437640 MtrunA17_Chr4g0066761 30.556 180 108 9 356 527 104 274 3.91e-11 65.1
Msa0437640 MtrunA17_Chr5g0440221 25.949 158 96 6 382 523 746 898 3.96e-11 66.6
Msa0437640 MtrunA17_Chr2g0312651 26.217 267 152 12 349 583 830 1083 3.97e-11 66.2
Msa0437640 MtrunA17_Chr7g0245221 23.693 287 171 12 328 579 617 890 3.97e-11 66.2
Msa0437640 MtrunA17_Chr7g0259211 29.741 232 131 13 315 527 271 489 4.01e-11 65.9
Msa0437640 MtrunA17_Chr1g0158181 26.214 206 132 8 334 525 328 527 4.11e-11 65.9
Msa0437640 MtrunA17_Chr1g0148511 25.954 262 159 11 343 578 438 690 4.51e-11 65.9
Msa0437640 MtrunA17_Chr3g0082141 25.197 254 157 7 361 584 181 431 4.81e-11 66.2
Msa0437640 MtrunA17_Chr1g0155161 25.833 240 141 9 377 585 507 740 5.39e-11 65.9
Msa0437640 MtrunA17_Chr6g0484071 26.493 268 160 14 343 582 74 332 5.59e-11 64.7
Msa0437640 MtrunA17_Chr3g0121971 21.196 368 236 10 259 583 506 862 5.84e-11 65.9
Msa0437640 MtrunA17_Chr5g0434141 25.545 321 187 18 300 582 562 868 5.92e-11 65.9
Msa0437640 MtrunA17_Chr2g0277731 28.870 239 135 14 312 527 291 517 6.00e-11 65.5
Msa0437640 MtrunA17_Chr8g0348661 27.941 204 125 8 334 525 488 681 6.52e-11 65.5
Msa0437640 MtrunA17_Chr4g0063701 25.871 201 131 7 333 522 529 722 6.78e-11 65.5
Msa0437640 MtrunA17_Chr1g0158051 24.878 205 134 8 334 524 306 504 6.81e-11 65.1
Msa0437640 MtrunA17_Chr2g0328211 30.323 155 90 6 382 525 124 271 7.44e-11 64.3
Msa0437640 MtrunA17_Chr1g0160721 23.105 277 180 12 333 582 352 622 8.12e-11 65.1
Msa0437640 MtrunA17_Chr7g0258051 20.664 271 196 7 321 579 2 265 8.28e-11 65.1
Msa0437640 MtrunA17_Chr8g0379931 22.591 301 197 11 309 582 687 978 8.64e-11 65.1
Msa0437640 MtrunA17_Chr7g0242201 26.842 190 124 8 349 530 66 248 9.34e-11 63.9
Msa0437640 MtrunA17_Chr1g0159611 30.244 205 123 10 343 534 254 451 9.67e-11 64.7
Msa0437640 MtrunA17_Chr2g0326901 24.727 275 162 12 343 582 239 503 9.68e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0437640 AT5G58520.1 61.614 607 203 6 1 584 1 600 0.0 731
Msa0437640 AT5G07140.1 62.116 586 213 4 1 584 1 579 0.0 691
Msa0437640 AT2G17700.1 33.818 275 167 6 315 582 269 535 1.61e-49 180
Msa0437640 AT4G35780.1 33.333 276 167 8 315 582 275 541 6.56e-48 176
Msa0437640 AT4G38470.2 34.221 263 162 5 325 582 283 539 2.09e-47 174
Msa0437640 AT4G38470.1 34.221 263 162 5 325 582 283 539 3.30e-47 174
Msa0437640 AT4G31170.7 34.118 255 156 5 334 582 137 385 5.09e-42 157
Msa0437640 AT4G31170.6 34.118 255 156 5 334 582 137 385 5.09e-42 157
Msa0437640 AT4G31170.5 34.118 255 156 5 334 582 137 385 5.09e-42 157
Msa0437640 AT4G31170.1 34.118 255 156 5 334 582 137 385 5.09e-42 157
Msa0437640 AT4G31170.2 34.118 255 156 5 334 582 137 385 5.09e-42 157
Msa0437640 AT4G31170.3 34.118 255 156 5 334 582 137 385 5.09e-42 157
Msa0437640 AT4G31170.8 34.118 255 156 5 334 582 137 385 5.09e-42 157
Msa0437640 AT5G58950.1 32.308 260 160 6 332 582 211 463 2.07e-41 157
Msa0437640 AT1G62400.1 28.920 287 179 8 309 582 66 340 2.75e-37 143
Msa0437640 AT2G24360.1 32.549 255 160 5 334 582 136 384 3.56e-37 143
Msa0437640 AT4G14780.1 28.274 336 207 7 275 582 6 335 5.59e-37 141
Msa0437640 AT4G38470.3 32.432 222 139 5 325 541 283 498 2.92e-34 136
Msa0437640 AT5G50000.1 29.167 264 159 5 343 582 97 356 5.54e-34 133
Msa0437640 AT3G27560.1 31.295 278 167 10 324 584 18 288 1.43e-33 132
Msa0437640 AT3G46930.1 28.425 292 177 10 309 582 143 420 7.47e-33 132
Msa0437640 AT3G46930.2 28.425 292 177 10 309 582 178 455 7.49e-33 132
Msa0437640 AT3G22750.1 25.490 306 195 5 306 582 48 349 2.55e-32 129
Msa0437640 AT3G01490.1 28.030 264 162 6 343 582 123 382 1.31e-31 127
Msa0437640 AT3G63260.1 24.579 297 187 5 319 582 70 362 3.53e-31 125
Msa0437640 AT5G50180.1 28.881 277 173 10 324 583 12 281 7.42e-31 124
Msa0437640 AT5G40540.1 30.216 278 170 10 324 584 18 288 1.18e-29 120
Msa0437640 AT3G24715.1 32.830 265 163 9 330 582 838 1099 2.07e-29 124
Msa0437640 AT3G24715.3 32.830 265 163 9 330 582 838 1099 2.07e-29 124
Msa0437640 AT3G24715.2 32.830 265 163 9 330 582 838 1099 2.07e-29 124
Msa0437640 AT5G57610.1 31.250 272 160 11 327 578 776 1040 4.29e-29 123
Msa0437640 AT5G01850.1 29.856 278 177 8 320 582 5 279 4.30e-28 115
Msa0437640 AT5G49470.1 28.000 275 185 7 315 582 188 456 7.83e-28 117
Msa0437640 AT5G40540.2 33.333 210 129 7 382 584 7 212 1.33e-27 112
Msa0437640 AT5G49470.3 28.000 275 185 7 315 582 475 743 3.91e-27 117
Msa0437640 AT5G49470.4 28.000 275 185 7 315 582 449 717 4.19e-27 117
Msa0437640 AT5G66710.1 31.278 227 136 9 370 584 117 335 4.89e-27 114
Msa0437640 AT5G49470.7 28.000 275 185 7 315 582 348 616 5.20e-27 116
Msa0437640 AT5G11850.1 26.838 272 185 7 321 584 598 863 7.11e-27 116
Msa0437640 AT3G46920.2 30.241 291 166 12 308 579 860 1132 1.35e-26 115
Msa0437640 AT3G46920.1 30.241 291 166 12 308 579 794 1066 1.45e-26 115
Msa0437640 AT3G06620.1 27.574 272 184 7 315 579 478 743 4.93e-26 113
Msa0437640 AT1G67890.1 28.674 279 177 9 315 582 471 738 5.86e-26 113
Msa0437640 AT3G06640.1 28.736 261 172 8 330 582 444 698 1.34e-25 112
Msa0437640 AT2G35050.1 31.022 274 159 11 326 578 968 1232 1.54e-25 112
Msa0437640 AT2G35050.2 31.022 274 159 11 326 578 968 1232 1.54e-25 112
Msa0437640 AT3G06640.2 28.736 261 172 8 330 582 444 698 1.64e-25 112
Msa0437640 AT3G06640.3 28.736 261 172 8 330 582 444 698 1.64e-25 112
Msa0437640 AT1G79570.2 31.496 254 155 9 343 582 979 1227 1.89e-25 112
Msa0437640 AT1G79570.1 31.496 254 155 9 343 582 979 1227 1.89e-25 112
Msa0437640 AT1G16270.1 30.526 285 173 11 317 582 848 1126 3.89e-25 111
Msa0437640 AT1G16270.2 30.526 285 173 11 317 582 848 1126 3.89e-25 111
Msa0437640 AT1G16270.3 30.526 285 173 11 317 582 848 1126 3.89e-25 111
Msa0437640 AT3G06630.2 27.273 275 187 7 315 582 418 686 6.25e-25 110
Msa0437640 AT5G40540.3 33.161 193 120 6 399 584 1 191 9.95e-25 103
Msa0437640 AT4G24480.2 28.253 269 176 8 325 582 661 923 1.03e-24 109
Msa0437640 AT4G24480.3 28.253 269 176 8 325 582 661 923 1.08e-24 109
Msa0437640 AT1G04700.1 30.952 252 159 9 343 582 781 1029 1.10e-24 109
Msa0437640 AT1G04700.2 30.952 252 159 9 343 582 781 1029 1.10e-24 109
Msa0437640 AT1G73660.1 25.448 279 196 5 313 584 729 1002 2.21e-24 108
Msa0437640 AT4G24480.1 29.197 274 172 11 325 582 661 928 2.55e-24 108
Msa0437640 AT3G50730.1 27.240 279 175 10 323 582 27 296 3.56e-24 105
Msa0437640 AT5G01850.2 31.553 206 131 5 384 582 101 303 4.84e-24 104
Msa0437640 AT1G08720.1 26.255 259 177 7 332 582 669 921 3.22e-23 105
Msa0437640 AT5G03730.2 26.616 263 178 6 332 585 551 807 3.81e-23 104
Msa0437640 AT5G03730.1 26.616 263 178 6 332 585 551 807 3.81e-23 104
Msa0437640 AT4G23050.1 24.046 262 185 6 330 583 465 720 5.10e-23 104
Msa0437640 AT4G23050.2 24.046 262 185 6 330 583 466 721 5.48e-23 104
Msa0437640 AT1G18160.1 26.337 243 171 4 343 582 730 967 8.18e-23 103
Msa0437640 AT1G14000.1 29.730 222 141 7 370 582 205 420 1.55e-22 101
Msa0437640 AT1G67890.4 28.137 263 167 9 315 566 343 594 3.69e-22 101
Msa0437640 AT1G67890.3 28.137 263 167 9 315 566 471 722 4.33e-22 101
Msa0437640 AT1G67890.2 28.137 263 167 9 315 566 471 722 4.33e-22 101
Msa0437640 AT4G18950.2 26.882 279 179 11 319 582 145 413 4.66e-22 99.8
Msa0437640 AT4G18950.1 26.882 279 179 11 319 582 145 413 5.43e-22 99.8
Msa0437640 AT3G06630.1 26.641 259 177 7 315 566 418 670 6.96e-22 100
Msa0437640 AT5G50000.2 28.829 222 128 6 343 538 97 314 1.80e-20 93.2
Msa0437640 AT2G31010.1 28.975 283 155 14 323 583 510 768 2.69e-20 95.9
Msa0437640 AT2G31010.2 28.975 283 155 14 323 583 510 768 2.69e-20 95.9
Msa0437640 AT3G46930.3 27.004 237 142 9 309 528 178 400 4.11e-20 93.6
Msa0437640 AT3G46930.6 27.004 237 142 9 309 528 82 304 4.19e-20 92.4
Msa0437640 AT3G46930.4 27.004 237 142 9 309 528 178 400 4.24e-20 93.6
Msa0437640 AT3G46930.5 27.004 237 142 9 309 528 143 365 5.67e-20 92.8
Msa0437640 AT3G50720.1 26.606 218 143 8 370 578 94 303 1.11e-19 91.7
Msa0437640 AT1G08720.2 26.033 242 165 7 332 565 669 904 3.87e-19 92.4
Msa0437640 AT1G74360.1 28.070 285 160 11 334 584 814 1087 1.22e-18 90.9
Msa0437640 AT1G18160.2 25.221 226 161 4 343 565 730 950 1.26e-18 90.9
Msa0437640 AT2G31800.1 25.175 286 177 10 321 582 182 454 3.24e-18 88.2
Msa0437640 AT3G58640.1 26.007 273 163 9 332 583 548 802 3.93e-18 89.0
Msa0437640 AT3G58640.2 26.007 273 163 9 332 583 548 802 3.93e-18 89.0
Msa0437640 AT4G31170.9 32.911 158 98 4 343 494 146 301 5.07e-18 85.5
Msa0437640 AT4G31170.10 32.911 158 98 4 343 494 146 301 5.07e-18 85.5
Msa0437640 AT4G31170.4 32.911 158 98 4 343 494 146 301 5.07e-18 85.5
Msa0437640 AT1G09000.1 26.070 257 168 7 339 579 76 326 5.43e-18 88.2
Msa0437640 AT1G09000.2 26.070 257 168 7 339 579 76 326 5.75e-18 88.2
Msa0437640 AT5G40540.4 28.511 235 145 9 324 541 18 246 1.43e-17 84.0
Msa0437640 AT2G42640.4 29.412 204 123 9 382 579 544 732 2.66e-17 86.3
Msa0437640 AT2G42640.1 29.412 204 123 9 382 579 582 770 2.85e-17 86.3
Msa0437640 AT5G49470.6 26.754 228 154 7 315 535 475 696 4.23e-17 85.5
Msa0437640 AT1G54960.1 25.292 257 170 7 339 579 75 325 4.26e-17 85.5
Msa0437640 AT1G54960.2 25.292 257 170 7 339 579 75 325 4.26e-17 85.5
Msa0437640 AT5G49470.5 26.754 228 154 7 315 535 475 696 4.33e-17 85.5
Msa0437640 AT3G63260.2 22.881 236 145 5 319 521 70 301 5.45e-17 83.2
Msa0437640 AT3G01490.2 26.126 222 134 7 343 538 123 340 8.36e-17 82.8
Msa0437640 AT3G06630.4 25.652 230 158 7 315 537 418 641 9.81e-17 84.3
Msa0437640 AT3G06630.3 25.652 230 158 7 315 537 418 641 9.81e-17 84.3
Msa0437640 AT3G06630.5 25.652 230 158 7 315 537 418 641 9.81e-17 84.3
Msa0437640 AT3G06030.1 26.168 214 148 5 370 579 118 325 1.34e-16 84.0
Msa0437640 AT1G63700.1 24.645 211 152 4 370 579 447 651 1.43e-16 84.0
Msa0437640 AT1G63700.2 24.645 211 152 4 370 579 447 651 1.43e-16 84.0
Msa0437640 AT5G16500.1 27.239 268 160 8 343 582 89 349 1.53e-16 83.6
Msa0437640 AT3G06630.6 25.652 230 158 7 315 537 334 557 2.21e-16 82.8
Msa0437640 AT3G59830.1 27.679 224 141 6 373 582 239 455 2.76e-16 82.4
Msa0437640 AT4G08500.1 28.283 198 136 5 382 579 391 582 4.51e-16 82.0
Msa0437640 AT4G08480.1 27.778 198 137 5 382 579 559 750 7.13e-16 81.6
Msa0437640 AT4G08470.1 25.301 249 172 8 339 579 310 552 7.27e-16 81.3
Msa0437640 AT2G43850.2 24.889 225 152 5 370 582 238 457 7.92e-16 80.9
Msa0437640 AT2G43850.1 24.889 225 152 5 370 582 238 457 8.21e-16 80.9
Msa0437640 AT2G43850.3 24.889 225 152 5 370 582 238 457 8.39e-16 80.9
Msa0437640 AT1G79640.6 27.826 230 145 9 360 579 51 269 9.98e-16 81.3
Msa0437640 AT1G79640.2 27.826 230 145 9 360 579 51 269 1.03e-15 81.3
Msa0437640 AT1G79640.4 27.826 230 145 9 360 579 51 269 1.03e-15 81.3
Msa0437640 AT1G79640.3 27.826 230 145 9 360 579 51 269 1.03e-15 81.3
Msa0437640 AT1G79640.5 27.826 230 145 9 360 579 54 272 1.06e-15 80.9
Msa0437640 AT1G79640.1 27.826 230 145 9 360 579 51 269 1.09e-15 80.9
Msa0437640 AT5G41730.2 25.210 238 148 6 370 582 274 506 1.84e-15 80.5
Msa0437640 AT5G41730.1 25.210 238 148 6 370 582 274 506 1.84e-15 80.5
Msa0437640 AT4G08470.3 27.273 198 138 6 382 579 279 470 2.06e-15 79.7
Msa0437640 AT3G07980.2 26.894 264 161 11 334 580 22 270 5.69e-15 79.3
Msa0437640 AT4G18250.1 31.148 183 109 8 349 522 379 553 6.11e-15 78.6
Msa0437640 AT3G07980.1 26.894 264 161 11 334 580 22 270 6.91e-15 79.0
Msa0437640 AT1G53570.7 24.747 198 144 3 382 579 273 465 8.29e-15 77.8
Msa0437640 AT1G53570.6 24.747 198 144 3 382 579 273 465 8.71e-15 77.8
Msa0437640 AT5G49470.2 29.139 151 101 3 434 582 658 804 1.00e-14 78.2
Msa0437640 AT3G13530.1 25.000 260 171 7 334 580 22 270 1.07e-14 78.2
Msa0437640 AT1G53570.2 24.747 198 144 3 382 579 273 465 1.10e-14 77.8
Msa0437640 AT1G53570.3 24.747 198 144 3 382 579 273 465 1.10e-14 77.8
Msa0437640 AT1G53570.1 24.747 198 144 3 382 579 273 465 1.12e-14 77.8
Msa0437640 AT1G53570.4 24.747 198 144 3 382 579 273 465 1.15e-14 77.8
Msa0437640 AT2G40860.3 27.094 203 110 6 405 573 104 302 1.30e-14 77.4
Msa0437640 AT2G40860.2 27.094 203 110 6 405 573 104 302 1.77e-14 77.0
Msa0437640 AT3G15220.1 24.402 209 153 4 371 579 59 262 1.88e-14 77.0
Msa0437640 AT2G40860.4 27.094 203 110 6 405 573 6 204 1.88e-14 76.6
Msa0437640 AT2G40860.1 27.094 203 110 6 405 573 104 302 1.97e-14 77.0
Msa0437640 AT4G20140.1 26.400 250 143 10 376 588 996 1241 2.96e-14 77.0
Msa0437640 AT5G38280.1 27.604 192 124 8 343 525 346 531 3.50e-14 76.3
Msa0437640 AT5G38280.2 27.604 192 124 8 343 525 346 531 4.51e-14 75.9
Msa0437640 AT1G64300.2 26.556 241 144 8 370 582 274 509 4.86e-14 75.9
Msa0437640 AT1G64300.1 26.556 241 144 8 370 582 274 509 4.86e-14 75.9
Msa0437640 AT1G53165.2 25.967 181 130 3 399 579 86 262 1.52e-13 74.3
Msa0437640 AT1G53165.3 25.967 181 130 3 399 579 86 262 1.54e-13 74.3
Msa0437640 AT1G53165.1 25.967 181 130 3 399 579 86 262 1.69e-13 73.9
Msa0437640 AT4G12020.4 24.242 198 141 4 382 579 1676 1864 1.70e-13 74.7
Msa0437640 AT4G12020.5 24.242 198 141 4 382 579 1609 1797 1.79e-13 74.3
Msa0437640 AT4G12020.2 24.242 198 141 4 382 579 1684 1872 1.83e-13 74.3
Msa0437640 AT1G66910.2 27.830 212 133 11 327 525 340 544 2.04e-13 73.9
Msa0437640 AT1G66910.1 27.830 212 133 11 327 525 343 547 2.44e-13 73.6
Msa0437640 AT3G24790.2 27.801 241 142 8 367 582 106 339 5.03e-13 71.6
Msa0437640 AT3G24790.1 27.801 241 142 8 367 582 88 321 5.36e-13 71.2
Msa0437640 AT2G02800.1 29.333 225 128 8 382 582 146 363 6.01e-13 71.6
Msa0437640 AT2G02800.2 29.333 225 128 8 382 582 146 363 6.01e-13 71.6
Msa0437640 AT1G26970.2 25.877 228 131 7 382 582 31 247 8.28e-13 69.7
Msa0437640 AT1G26970.1 25.877 228 131 7 382 582 146 362 1.06e-12 70.9
Msa0437640 AT5G13160.1 33.010 206 112 11 343 533 101 295 1.24e-12 70.9
Msa0437640 AT5G24080.3 25.379 264 166 10 343 582 418 674 1.38e-12 71.2
Msa0437640 AT5G24080.1 25.379 264 166 10 343 582 418 674 1.38e-12 71.2
Msa0437640 AT1G15530.1 28.870 239 139 9 370 583 399 631 1.52e-12 70.9
Msa0437640 AT5G24080.2 25.379 264 166 10 343 582 545 801 1.54e-12 71.2
Msa0437640 AT1G51940.1 22.727 374 204 14 275 582 269 623 1.99e-12 70.5
Msa0437640 AT3G51990.1 26.364 220 131 8 388 582 116 329 2.02e-12 69.3
Msa0437640 AT4G13190.1 22.956 318 191 12 309 582 38 345 2.37e-12 69.3
Msa0437640 AT1G20650.1 27.715 267 158 11 343 582 93 351 2.55e-12 69.3
Msa0437640 AT5G39030.2 25.483 259 161 12 349 582 514 765 2.81e-12 70.1
Msa0437640 AT1G52310.2 25.704 284 164 11 329 579 193 462 3.92e-12 69.3
Msa0437640 AT5G39030.1 25.483 259 161 12 349 582 520 771 4.03e-12 69.7
Msa0437640 AT3G55450.1 25.541 231 136 8 382 584 124 346 4.51e-12 68.6
Msa0437640 AT1G52310.1 25.704 284 164 11 329 579 270 539 4.68e-12 69.3
Msa0437640 AT5G48740.1 26.573 286 171 12 327 582 601 877 5.03e-12 69.7
Msa0437640 AT5G62230.2 27.236 246 143 9 364 583 632 867 5.69e-12 69.3
Msa0437640 AT5G62230.1 27.236 246 143 9 364 583 680 915 5.76e-12 69.3
Msa0437640 AT4G13190.4 24.901 253 152 11 309 533 38 280 6.19e-12 67.4
Msa0437640 AT1G14370.1 28.251 223 133 7 382 582 149 366 6.41e-12 68.2
Msa0437640 AT4G28490.1 25.830 271 153 10 349 582 705 964 7.05e-12 69.3
Msa0437640 AT3G55450.2 25.541 231 136 8 382 584 161 383 7.72e-12 68.2
Msa0437640 AT3G07070.1 30.542 203 121 9 343 533 94 288 8.04e-12 67.8
Msa0437640 AT2G19130.1 25.000 280 171 11 334 582 495 766 8.43e-12 68.9
Msa0437640 AT3G25490.1 29.744 195 111 8 352 533 133 314 8.50e-12 68.2
Msa0437640 AT1G66460.3 26.592 267 154 10 350 582 180 438 8.67e-12 68.2
Msa0437640 AT1G78980.1 24.786 234 143 8 374 584 451 674 8.98e-12 68.6
Msa0437640 AT3G20530.2 26.136 264 156 12 302 535 40 294 9.76e-12 66.6
Msa0437640 AT1G06840.1 23.843 281 177 9 327 579 620 891 1.05e-11 68.6
Msa0437640 AT2G07180.1 32.680 153 90 7 382 527 150 296 1.06e-11 67.8
Msa0437640 AT2G07180.2 32.680 153 90 7 382 527 150 296 1.06e-11 67.8
Msa0437640 AT4G13190.5 26.154 260 158 10 349 582 5 256 1.07e-11 66.6
Msa0437640 AT5G59670.2 26.538 260 160 9 343 579 579 830 1.08e-11 68.6
Msa0437640 AT5G59670.1 26.538 260 160 9 343 579 579 830 1.08e-11 68.6
Msa0437640 AT3G20530.1 26.136 264 156 12 302 535 40 294 1.13e-11 67.4
Msa0437640 AT1G66460.1 26.592 267 154 10 350 582 153 411 1.23e-11 67.8
Msa0437640 AT4G29450.1 23.868 243 146 8 367 582 618 848 1.27e-11 68.2
Msa0437640 AT1G10620.1 26.633 199 132 8 343 534 385 576 1.39e-11 67.8
Msa0437640 AT1G67720.1 26.754 228 143 9 320 530 589 809 1.83e-11 67.8
Msa0437640 AT1G49100.1 27.411 197 117 8 343 525 596 780 1.86e-11 67.8
Msa0437640 AT1G76370.1 27.547 265 157 10 343 580 90 346 1.96e-11 66.6
Msa0437640 AT2G28590.2 30.814 172 101 8 367 528 139 302 2.05e-11 65.9
Msa0437640 AT4G29180.1 29.310 174 97 8 365 525 616 776 2.54e-11 67.4
Msa0437640 AT4G29180.3 29.310 174 97 8 365 525 615 775 2.74e-11 67.0
Msa0437640 AT4G29180.2 29.310 174 97 8 365 525 618 778 2.79e-11 67.0
Msa0437640 AT2G28590.1 30.814 172 101 8 367 528 139 302 2.84e-11 66.2
Msa0437640 AT1G70460.1 27.638 199 130 8 343 534 368 559 4.01e-11 66.6
Msa0437640 AT1G51790.2 27.751 209 125 8 334 527 631 828 4.37e-11 66.6
Msa0437640 AT1G51790.3 27.751 209 125 8 334 527 579 776 4.46e-11 66.6
Msa0437640 AT1G51790.1 27.751 209 125 8 334 527 579 776 4.46e-11 66.6
Msa0437640 AT1G16130.1 23.462 260 167 9 343 578 431 682 4.58e-11 66.2
Msa0437640 AT5G38250.1 26.108 203 128 10 334 525 316 507 4.61e-11 66.2
Msa0437640 AT1G66980.2 27.451 204 130 9 334 525 836 1033 5.02e-11 66.6
Msa0437640 AT1G66980.1 27.451 204 130 9 334 525 807 1004 5.20e-11 66.2
Msa0437640 AT1G66980.4 27.451 204 130 9 334 525 790 987 5.50e-11 66.2
Msa0437640 AT1G07650.3 22.074 299 193 12 315 582 635 924 5.54e-11 66.2
Msa0437640 AT1G07650.2 22.074 299 193 12 315 582 667 956 5.75e-11 66.2
Msa0437640 AT1G66980.3 27.451 204 130 9 334 525 834 1031 6.33e-11 66.2
Msa0437640 AT5G56890.1 23.420 269 168 10 343 582 738 997 6.49e-11 66.2
Msa0437640 AT3G45420.1 25.468 267 159 12 343 582 365 618 6.50e-11 65.9
Msa0437640 AT1G07650.1 22.074 299 193 12 315 582 661 950 6.52e-11 65.9
Msa0437640 AT1G07650.4 22.074 299 193 12 315 582 448 737 6.81e-11 65.9
Msa0437640 AT1G49160.1 27.119 177 114 7 377 547 63 230 7.19e-11 65.5
Msa0437640 AT3G09010.1 24.221 289 183 11 328 588 42 322 7.40e-11 64.7
Msa0437640 AT2G45910.2 26.119 268 168 11 337 585 486 742 7.63e-11 65.9
Msa0437640 AT2G45910.1 26.119 268 168 11 337 585 486 742 7.63e-11 65.9
Msa0437640 AT3G59420.1 27.653 311 177 16 315 584 484 787 8.14e-11 65.5
Msa0437640 AT1G21230.1 27.363 201 127 7 343 533 423 614 8.44e-11 65.5
Msa0437640 AT4G21410.1 23.828 256 167 11 285 525 191 433 9.23e-11 65.1
Msa0437640 AT1G49160.2 26.857 175 117 6 377 547 81 248 9.69e-11 65.1
Msa0437640 AT3G04690.1 25.957 235 145 10 367 579 557 784 9.96e-11 65.5

Find 167 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGCTTCTACTTGTTCTTTC+TGG 0.028663 3_3:+1559425 Msa0437640:CDS
AATTTCAAGGGGAGAGAGTT+TGG 0.221330 3_3:+1559566 Msa0437640:CDS
ATAGTTTCGGTATGGTAATT+TGG 0.239878 3_3:+1561395 Msa0437640:CDS
TGCTTCTACTTGTTCTTTCT+GGG 0.265388 3_3:+1559426 Msa0437640:CDS
TTGTTTCAGATTTCTGAATT+TGG 0.268635 3_3:-1558204 None:intergenic
CTTGCAACTCTCCAATTTCA+TGG 0.271197 3_3:+1559315 Msa0437640:CDS
CGCTAAAATTTCGGAGAAAT+CGG 0.274031 3_3:-1561578 None:intergenic
GACTGGACACAATTCGTATA+AGG 0.281798 3_3:+1559784 Msa0437640:CDS
GGTGGTGTGAAGCTTCCTTT+TGG 0.291744 3_3:+1559521 Msa0437640:CDS
CATGTCTCGGTGACACTCTC+AGG 0.296591 3_3:-1561358 None:intergenic
AGAGTTTGTGGACAGTCCTT+TGG 0.297411 3_3:-1561508 None:intergenic
GACATTGCAGGCCATGAAAT+TGG 0.298183 3_3:-1559326 None:intergenic
GCATTTCAAGCTGAATCTTT+TGG 0.300186 3_3:-1559646 None:intergenic
TAGTTTCGGTATGGTAATTT+GGG 0.309439 3_3:+1561396 Msa0437640:CDS
CTCCCTTGACAAGGAATGTT+TGG 0.322551 3_3:-1561685 None:intergenic
GGAGTAGCAACAACCTTGTT+TGG 0.327945 3_3:+1558593 Msa0437640:CDS
CAACAATATCGCTAAAATTT+CGG 0.343152 3_3:-1561587 None:intergenic
ATGAGTAATGTTTATAGTTT+CGG 0.346363 3_3:+1561382 Msa0437640:CDS
GAGTTTGTGGACAGTCCTTT+GGG 0.351557 3_3:-1561507 None:intergenic
TTGTTGTTGGGTTGTGAAGA+TGG 0.352534 3_3:-1558421 None:intergenic
ACAGAATCCTCTGTGTATTA+AGG 0.353301 3_3:-1560120 None:intergenic
GAGTAGCAACAACCTTGTTT+GGG 0.356009 3_3:+1558594 Msa0437640:CDS
TGTTCTTTCTGGGGCTGGTC+AGG 0.356725 3_3:+1559436 Msa0437640:CDS
CTACTTGTTCTTTCTGGGGC+TGG 0.364988 3_3:+1559431 Msa0437640:CDS
ATGCCTACTGCTGCCTGCAC+AGG 0.375664 3_3:-1561457 None:intergenic
GTTTACCTATTGTTGTTGTT+TGG 0.382131 3_3:-1561613 None:intergenic
ATTAAAGACTTCAGAGTTTG+TGG 0.384158 3_3:-1561520 None:intergenic
AAGGTGGTGGTGGTTGGTTA+TGG 0.391081 3_3:-1558236 None:intergenic
GGTAGAACAACAAGTTCTAA+TGG 0.394849 3_3:+1558390 Msa0437640:CDS
GCTGTTGTTGTTGTCGTGTT+TGG 0.395964 3_3:-1558557 None:intergenic
CTGAATCTTCTTGCAGCAAA+TGG 0.399072 3_3:-1559369 None:intergenic
GCTAAAATTTCGGAGAAATC+GGG 0.404381 3_3:-1561577 None:intergenic
CCTTTGGGATCTCAGGTCTA+AGG 0.407618 3_3:-1561492 None:intergenic
CAAGCTGATTGAGCAAGCTT+TGG 0.411650 3_3:+1559208 Msa0437640:CDS
GGACAGTCCTTTGGGATCTC+AGG 0.412296 3_3:-1561499 None:intergenic
GAATGTGTGAGTGAGGGATT+TGG 0.412749 3_3:-1558286 None:intergenic
TGTTGTTGGGTTGTGAAGAT+GGG 0.413541 3_3:-1558420 None:intergenic
ACTTCCACTTTCAAGATCAA+TGG 0.414367 3_3:+1558309 Msa0437640:exon
ATGCGTAGTGACGAAATTCA+TGG 0.417652 3_3:+1559970 Msa0437640:CDS
TCCAATGCACTCGACATTGC+AGG 0.417995 3_3:-1559338 None:intergenic
TAAACATGGGAGCGCTTGCT+TGG 0.429062 3_3:+1560147 Msa0437640:CDS
ATTGAGCAAGCTTTGGAAGA+TGG 0.429788 3_3:+1559215 Msa0437640:CDS
AATGTGTGAGTGAGGGATTT+GGG 0.433571 3_3:-1558285 None:intergenic
TTTCATAGTCCATTGCCTCT+TGG 0.438358 3_3:-1560204 None:intergenic
ATCATAGTGCTTACGAATGT+TGG 0.442252 3_3:-1558680 None:intergenic
AATGGTGTATACTGCGGAAA+CGG 0.442523 3_3:+1559608 Msa0437640:CDS
CGGTATGGTAATTTGGGAGA+TGG 0.450042 3_3:+1561402 Msa0437640:CDS
CACATCTTTAACATCAAATC+CGG 0.451768 3_3:-1559174 None:intergenic
AAGATCAATGGCTTCAGCAT+TGG 0.451927 3_3:+1558321 Msa0437640:exon
AGCTTCACACCACCGGCTTT+AGG 0.460088 3_3:-1559512 None:intergenic
ACTGGACACAATTCGTATAA+GGG 0.462518 3_3:+1559785 Msa0437640:CDS
TGCGACCAAACAACAACAAT+AGG 0.463879 3_3:+1561608 Msa0437640:CDS
GTTGAACTTCTTGTGAATGA+TGG 0.466454 3_3:-1558464 None:intergenic
GAAGAAGAAGAAGGTGGTGG+TGG 0.468375 3_3:-1558246 None:intergenic
TTTGGAGAGATTGAAGAAGA+TGG 0.470244 3_3:+1559584 Msa0437640:CDS
TTGAGCAAGCTTTGGAAGAT+GGG 0.473824 3_3:+1559216 Msa0437640:CDS
AGCGCTTGCTTGGGAGATAT+CGG 0.474174 3_3:+1560157 Msa0437640:CDS
TTCTCAGGAAGCTGGCTACC+AGG 0.475319 3_3:-1558649 None:intergenic
GTGGTGGTTGGTTATGGAAA+CGG 0.475735 3_3:-1558230 None:intergenic
TGGCTTCAGCATTGGAATGT+TGG 0.477299 3_3:+1558329 Msa0437640:CDS
ACTATGATTCATTGCCTCCT+AGG 0.481457 3_3:+1558695 Msa0437640:CDS
GGTTGAAAACAGGTAATCTC+AGG 0.482199 3_3:+1561331 Msa0437640:intron
GACGGTGATATGCAGCTTCA+AGG 0.483408 3_3:+1559269 Msa0437640:CDS
ATGTTGGACATAAGCTTCTC+AGG 0.485061 3_3:-1558664 None:intergenic
GTAATTTGGGAGATGGTATC+CGG 0.485780 3_3:+1561409 Msa0437640:CDS
AAACATGGGAGCGCTTGCTT+GGG 0.486908 3_3:+1560148 Msa0437640:CDS
TGACATCCACAGAGCCCAAA+AGG 0.488251 3_3:-1559536 None:intergenic
ACAACAGCAACAACACTTGT+CGG 0.488886 3_3:+1558572 Msa0437640:CDS
GATACATGAAAAGACGAATT+CGG 0.489869 3_3:-1559674 None:intergenic
AACTGATGGTTACCGGTGGC+TGG 0.490081 3_3:+1560225 Msa0437640:CDS
TACTGCATATTCGCCTGTGC+AGG 0.491787 3_3:+1561444 Msa0437640:CDS
TTCGTATAAGGGAACATACA+TGG 0.493555 3_3:+1559796 Msa0437640:CDS
ACTATGAAACTGATGGTTAC+CGG 0.497014 3_3:+1560218 Msa0437640:CDS
ATGGTGTATACTGCGGAAAC+GGG 0.499998 3_3:+1559609 Msa0437640:CDS
GATGGCAAAGACATCATAAG+AGG 0.500171 3_3:-1561802 None:intergenic
AAGAAGAAGGTGGTGGTGGT+TGG 0.501244 3_3:-1558242 None:intergenic
CACAGGCGAATATGCAGTAT+AGG 0.504398 3_3:-1561440 None:intergenic
AATCTTACTCAGCTTTATCC+TGG 0.510989 3_3:+1558631 Msa0437640:CDS
TGGGGCTGGTCAGGATAAGT+TGG 0.513653 3_3:+1559445 Msa0437640:CDS
GCAGTAGGCATTGCTGCTTG+TGG 0.514334 3_3:+1561469 Msa0437640:CDS
GGAGAAGAAGAAGAAGGTGG+TGG 0.517818 3_3:-1558249 None:intergenic
GAGAAGAAAAGTCTCACCCT+TGG 0.518298 3_3:+1559398 Msa0437640:CDS
TTTGAGCGCGCTTTCAACCC+TGG 0.522141 3_3:-1559474 None:intergenic
AGTCTTTAATGACAAAGTGC+TGG 0.522799 3_3:+1561533 Msa0437640:CDS
CAAGTAGAAGCACGATTCCA+AGG 0.524457 3_3:-1559415 None:intergenic
ATCTCAGAGGGTGTGACAAA+GGG 0.531887 3_3:+1559840 Msa0437640:CDS
TGCAGTATAGGCTGCTTCAC+CGG 0.532816 3_3:-1561428 None:intergenic
TAATGTTTATAGTTTCGGTA+TGG 0.534803 3_3:+1561387 Msa0437640:CDS
AAATCTGAAGTCACAGGTGA+AGG 0.535756 3_3:-1558148 None:intergenic
GAACAAGAAGCTTCAGAACA+AGG 0.536898 3_3:+1560024 Msa0437640:CDS
GCCTGCAATGTCGAGTGCAT+TGG 0.537322 3_3:+1559337 Msa0437640:CDS
TGTGGAGGAGAAGAAGAAGA+AGG 0.538836 3_3:-1558255 None:intergenic
AGAAAATAGTAGATTCATGA+TGG 0.539948 3_3:-1561820 None:intergenic
ATGTCAAGAGGAGAATTTCA+AGG 0.542635 3_3:+1559553 Msa0437640:CDS
AGGATAAGTTGGTAAGGACC+AGG 0.542694 3_3:+1559456 Msa0437640:CDS
ATACCTCAGGAGCCAGCCAC+CGG 0.543365 3_3:-1560237 None:intergenic
TAATACACAGAGGATTCTGT+TGG 0.547652 3_3:+1560123 Msa0437640:CDS
GTTTGTGTAGATGACAATCA+TGG 0.547901 3_3:+1559944 Msa0437640:CDS
ACAGAAATGGTTGTTGAGCT+CGG 0.550598 3_3:+1559739 Msa0437640:CDS
CAAGAGCAACCAAGAGGCAA+TGG 0.555533 3_3:+1560195 Msa0437640:CDS
AGGATTCTGTTGGATAAACA+TGG 0.555810 3_3:+1560133 Msa0437640:CDS
CTGAGAGTGTCACCGAGACA+TGG 0.558635 3_3:+1561359 Msa0437640:CDS
TCGTATAAGGGAACATACAT+GGG 0.558950 3_3:+1559797 Msa0437640:CDS
AACATTACTCATCCATGTCT+CGG 0.559322 3_3:-1561371 None:intergenic
AATCTCAGAGGGTGTGACAA+AGG 0.559964 3_3:+1559839 Msa0437640:CDS
TGACAACAGTTCCCCAAACA+AGG 0.560652 3_3:-1558606 None:intergenic
GAAGCCATTGATCTTGAAAG+TGG 0.561114 3_3:-1558313 None:intergenic
GAGATTGAAGAAGATGGTAA+TGG 0.561652 3_3:+1559590 Msa0437640:CDS
TCGCCTGTGCAGGCAGCAGT+AGG 0.561685 3_3:+1561454 Msa0437640:CDS
ACATACATGGGGAAAAGAGT+TGG 0.563604 3_3:+1559809 Msa0437640:CDS
GAAATTCATGGAAGGTGGAT+CGG 0.563752 3_3:+1559982 Msa0437640:CDS
ATGCGGATGAGATACAGAAA+TGG 0.565839 3_3:+1559726 Msa0437640:CDS
ACATAAGCTTCTCAGGAAGC+TGG 0.567168 3_3:-1558657 None:intergenic
TTACCGGTGGCTGGCTCCTG+AGG 0.568311 3_3:+1560234 Msa0437640:CDS
TCTACACAAACACCGCAAAA+CGG 0.568512 3_3:-1559932 None:intergenic
AGGGATTTGGGAAGAATGTG+TGG 0.569311 3_3:-1558273 None:intergenic
GCTTCTACTTGTTCTTTCTG+GGG 0.574253 3_3:+1559427 Msa0437640:CDS
TGTAAGAAATCTGAAGTCAC+AGG 0.576196 3_3:-1558154 None:intergenic
ATTCATATGAGTTCATGCTC+AGG 0.578502 3_3:+1559864 Msa0437640:CDS
TGGAAGTGAATGTGTGAGTG+AGG 0.582626 3_3:-1558293 None:intergenic
TGGGCTCTGTGGATGTCAAG+AGG 0.583469 3_3:+1559541 Msa0437640:CDS
GAACAGTTACAAAAGCATAG+AGG 0.584605 3_3:-1561728 None:intergenic
ATACCAAACATTCCTTGTCA+AGG 0.584980 3_3:+1561682 Msa0437640:three_prime_UTR
TGTCAAGAGGAGAATTTCAA+GGG 0.587713 3_3:+1559554 Msa0437640:CDS
ATGTCTCGGTGACACTCTCA+GGG 0.587804 3_3:-1561357 None:intergenic
AAAAGGAAGCTTCACACCAC+CGG 0.589359 3_3:-1559519 None:intergenic
CTGGTCAGGATAAGTTGGTA+AGG 0.590507 3_3:+1559450 Msa0437640:CDS
GGAGGAGAAGAAGAAGAAGG+TGG 0.591540 3_3:-1558252 None:intergenic
TGAAAAGACGAATTCGGCAA+GGG 0.591559 3_3:-1559668 None:intergenic
TTCATGTATCGGTAGATGAG+TGG 0.592374 3_3:+1559687 Msa0437640:CDS
AGCTTTGGAAGATGGGCAAG+CGG 0.593541 3_3:+1559223 Msa0437640:CDS
GTGACGAAATTCATGGAAGG+TGG 0.597334 3_3:+1559977 Msa0437640:CDS
CAACAACGAAGAAGAAGACA+TGG 0.599371 3_3:+1558369 Msa0437640:CDS
AATTGCAGTTGATGTGGCTG+AGG 0.599817 3_3:+1560057 Msa0437640:CDS
GTGGTTGGTTATGGAAACGG+TGG 0.604946 3_3:-1558227 None:intergenic
CTAAAATTTCGGAGAAATCG+GGG 0.606016 3_3:-1561576 None:intergenic
TACCAAACATTCCTTGTCAA+GGG 0.609339 3_3:+1561683 Msa0437640:three_prime_UTR
ATGAAAAGACGAATTCGGCA+AGG 0.619973 3_3:-1559669 None:intergenic
GCTATGAAGAAGCCTAAAGC+CGG 0.629794 3_3:+1559500 Msa0437640:CDS
TGTAAGAATTGCAGTTGATG+TGG 0.631237 3_3:+1560051 Msa0437640:CDS
CTGCTAGAATTGATGACATG+TGG 0.633339 3_3:+1559893 Msa0437640:CDS
AAGTAGAAGCACGATTCCAA+GGG 0.641918 3_3:-1559414 None:intergenic
AGTAGCAACAACCTTGTTTG+GGG 0.642598 3_3:+1558595 Msa0437640:CDS
GGAAGTGAATGTGTGAGTGA+GGG 0.646722 3_3:-1558292 None:intergenic
TGTATGAAACTCCCTTGACA+AGG 0.646930 3_3:-1561694 None:intergenic
TGTCGTGTTTGGAAGAATCG+AGG 0.647513 3_3:-1558546 None:intergenic
TTGATTGAAGAAGAGTGTGA+CGG 0.647894 3_3:+1559251 Msa0437640:CDS
GAATGAGATTTGTACCTAGG+AGG 0.658936 3_3:-1558709 None:intergenic
ATTGCAGTTGATGTGGCTGA+GGG 0.660068 3_3:+1560058 Msa0437640:CDS
AGCAAATGTCAACTTAAACA+AGG 0.661736 3_3:-1559294 None:intergenic
GTCAAGAGGAGAATTTCAAG+GGG 0.665631 3_3:+1559555 Msa0437640:CDS
CGTATAAGGGAACATACATG+GGG 0.665638 3_3:+1559798 Msa0437640:CDS
GGATTCTGTTGGATAAACAT+GGG 0.667173 3_3:+1560134 Msa0437640:CDS
ATGAAGAAGCCTAAAGCCGG+TGG 0.669298 3_3:+1559503 Msa0437640:CDS
TTGGCATTGAGAATCTCAGA+GGG 0.673748 3_3:+1559828 Msa0437640:CDS
CCTTAGACCTGAGATCCCAA+AGG 0.680562 3_3:+1561492 Msa0437640:CDS
GATTTGGGAAGAATGTGTGG+AGG 0.680731 3_3:-1558270 None:intergenic
TGCTTGCAAGAGCAACCAAG+AGG 0.682263 3_3:+1560189 Msa0437640:CDS
GCAGACTATTCAGACAGATG+CGG 0.689186 3_3:+1559709 Msa0437640:CDS
GGATAAGTTGGTAAGGACCA+GGG 0.692418 3_3:+1559457 Msa0437640:CDS
GCAATGGACTATGAAACTGA+TGG 0.692472 3_3:+1560211 Msa0437640:CDS
GATGGTAATGGTGTATACTG+CGG 0.697831 3_3:+1559602 Msa0437640:CDS
GTAGTGACGAAATTCATGGA+AGG 0.707503 3_3:+1559974 Msa0437640:CDS
ATGAAACTGATGGTTACCGG+TGG 0.713729 3_3:+1560221 Msa0437640:CDS
GTTGGCATTGAGAATCTCAG+AGG 0.738488 3_3:+1559827 Msa0437640:CDS
ACAGAGACCTTAATACACAG+AGG 0.746040 3_3:+1560113 Msa0437640:CDS
TTGCAGTTGATGTGGCTGAG+GGG 0.748945 3_3:+1560059 Msa0437640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTCAATTCCATATAATT+TGG + chr3_3:1558948-1558967 Msa0437640:intron 15.0%
!!! AAAGTTTAATTTATTTCAAC+TGG + chr3_3:1559022-1559041 Msa0437640:intron 15.0%
!!! AAGTTTAATTTATTTCAACT+GGG + chr3_3:1559023-1559042 Msa0437640:intron 15.0%
!!! TTATAATTTTGATACTTTCA+TGG + chr3_3:1560780-1560799 Msa0437640:intron 15.0%
!! TGACAAATAACTAAAATATT+AGG - chr3_3:1561249-1561268 None:intergenic 15.0%
!!! TAAAAAAGTTGAATTTCTTT+TGG + chr3_3:1561763-1561782 Msa0437640:three_prime_UTR 15.0%
!!! CAATGTTTTTGTTTTGTTTA+AGG + chr3_3:1558862-1558881 Msa0437640:intron 20.0%
!!! AGTTTAATTTATTTCAACTG+GGG + chr3_3:1559024-1559043 Msa0437640:intron 20.0%
!!! TGTCTTTGTTTTCTTTTTAT+GGG + chr3_3:1559134-1559153 Msa0437640:intron 20.0%
!!! GAAATAATTAGAAGTATGAA+TGG - chr3_3:1560369-1560388 None:intergenic 20.0%
!! TTGAAATTTCGATAAATTCA+AGG - chr3_3:1560616-1560635 None:intergenic 20.0%
!!! GTCTTTTGTTAGTAATTTTA+TGG + chr3_3:1560652-1560671 Msa0437640:intron 20.0%
!! ATGAGTAATGTTTATAGTTT+CGG + chr3_3:1561382-1561401 Msa0437640:CDS 20.0%
! TTGTTTCAGATTTCTGAATT+TGG - chr3_3:1558207-1558226 None:intergenic 25.0%
!!! TTATAGTGTTGTTTTTGTGA+TGG + chr3_3:1558755-1558774 Msa0437640:intron 25.0%
!!! TATAGTGTTGTTTTTGTGAT+GGG + chr3_3:1558756-1558775 Msa0437640:intron 25.0%
!!! TTGTTTTGTTTAAGGTTGTT+TGG + chr3_3:1558870-1558889 Msa0437640:intron 25.0%
! ATATGGAATTGAATATTCAC+TGG - chr3_3:1558944-1558963 None:intergenic 25.0%
!!! GTGTCTTTGTTTTCTTTTTA+TGG + chr3_3:1559133-1559152 Msa0437640:intron 25.0%
!!! GTCTTTGTTTTCTTTTTATG+GGG + chr3_3:1559135-1559154 Msa0437640:intron 25.0%
!!! TCTTTGTTTTCTTTTTATGG+GGG + chr3_3:1559136-1559155 Msa0437640:intron 25.0%
!! ATCAAGTTTTTGAATGATCA+TGG + chr3_3:1560082-1560101 Msa0437640:CDS 25.0%
! TTTAGGAAAGACACAATAAA+TGG + chr3_3:1560469-1560488 Msa0437640:intron 25.0%
! TTAGGAAAGACACAATAAAT+GGG + chr3_3:1560470-1560489 Msa0437640:intron 25.0%
! ATTTGATCCTTAAATGTGTA+AGG + chr3_3:1560575-1560594 Msa0437640:intron 25.0%
!! TACATAAATGTGTCTTTTGT+TGG - chr3_3:1560752-1560771 None:intergenic 25.0%
! CATCCTTAAAGTCAATAAAT+CGG - chr3_3:1560975-1560994 None:intergenic 25.0%
!!! ATAAAGCTTCTTTTAAGTGT+AGG - chr3_3:1561040-1561059 None:intergenic 25.0%
! AATAACAATTATCACATGCT+AGG - chr3_3:1561095-1561114 None:intergenic 25.0%
! TATAATTATACAAGTCTGTG+CGG + chr3_3:1561141-1561160 Msa0437640:intron 25.0%
!!! TTGTTTTTCATTCCTCATTT+TGG + chr3_3:1561310-1561329 Msa0437640:intron 25.0%
! TAATGTTTATAGTTTCGGTA+TGG + chr3_3:1561387-1561406 Msa0437640:CDS 25.0%
! CAACAATATCGCTAAAATTT+CGG - chr3_3:1561590-1561609 None:intergenic 25.0%
!! AACAATAGGTAAACTTTTGT+TGG + chr3_3:1561622-1561641 Msa0437640:exon 25.0%
! AGAAAATAGTAGATTCATGA+TGG - chr3_3:1561823-1561842 None:intergenic 25.0%
!! ATCTACTATTTTCTGTTTTG+TGG + chr3_3:1561829-1561848 Msa0437640:three_prime_UTR 25.0%
! TTGTTGTTGTTGTTGTTGTT+GGG - chr3_3:1558436-1558455 None:intergenic 30.0%
!! TTTGTTGTTGTTGTTGTTGT+TGG - chr3_3:1558437-1558456 None:intergenic 30.0%
! CTTAATCTAAGATCGAATCT+GGG - chr3_3:1558734-1558753 None:intergenic 30.0%
!! TTTCTAGAACCTCTAAAGTT+TGG + chr3_3:1558793-1558812 Msa0437640:intron 30.0%
TCAAAAGTTCCAAACTTTAG+AGG - chr3_3:1558805-1558824 None:intergenic 30.0%
!! AAAGTTTGGAACTTTTGAGT+TGG + chr3_3:1558807-1558826 Msa0437640:intron 30.0%
!!! AAGTTTGGAACTTTTGAGTT+GGG + chr3_3:1558808-1558827 Msa0437640:intron 30.0%
ATGCAATTGAATCTTCAGAT+TGG - chr3_3:1558840-1558859 None:intergenic 30.0%
CACATCACAACCAAATTATA+TGG - chr3_3:1558961-1558980 None:intergenic 30.0%
!! GCACTGTTTTATTGTGTTTA+AGG + chr3_3:1559090-1559109 Msa0437640:intron 30.0%
!!! CTTTGTTTTCTTTTTATGGG+GGG + chr3_3:1559137-1559156 Msa0437640:intron 30.0%
CACATCTTTAACATCAAATC+CGG - chr3_3:1559177-1559196 None:intergenic 30.0%
AGCAAATGTCAACTTAAACA+AGG - chr3_3:1559297-1559316 None:intergenic 30.0%
GATACATGAAAAGACGAATT+CGG - chr3_3:1559677-1559696 None:intergenic 30.0%
! GAATTCGTCTTTTCATGTAT+CGG + chr3_3:1559676-1559695 Msa0437640:CDS 30.0%
!!! AAAAACATTTTGCCGTTTTG+CGG + chr3_3:1559920-1559939 Msa0437640:CDS 30.0%
CAAATCACGCTTATTTAAGT+TGG + chr3_3:1560264-1560283 Msa0437640:intron 30.0%
!!! TCGATACATTTTTCAAGGAA+TGG - chr3_3:1560544-1560563 None:intergenic 30.0%
ACTAACAAAAGACACACTTA+GGG - chr3_3:1560645-1560664 None:intergenic 30.0%
TACTAACAAAAGACACACTT+AGG - chr3_3:1560646-1560665 None:intergenic 30.0%
TTATGGACCAAATCGATTAA+CGG + chr3_3:1560669-1560688 Msa0437640:intron 30.0%
ATATGTTTGTGTAGCCATAA+TGG + chr3_3:1560902-1560921 Msa0437640:intron 30.0%
TTTAGTAGTGTTTGCCATTA+TGG - chr3_3:1560919-1560938 None:intergenic 30.0%
!! AGACCGATTTATTGACTTTA+AGG + chr3_3:1560969-1560988 Msa0437640:intron 30.0%
ATACCTGAAATGATTCCATA+TGG + chr3_3:1561180-1561199 Msa0437640:intron 30.0%
GATATCATGTGAAAGCTTTA+TGG - chr3_3:1561216-1561235 None:intergenic 30.0%
ATAGTTTCGGTATGGTAATT+TGG + chr3_3:1561395-1561414 Msa0437640:CDS 30.0%
TAGTTTCGGTATGGTAATTT+GGG + chr3_3:1561396-1561415 Msa0437640:CDS 30.0%
ATTAAAGACTTCAGAGTTTG+TGG - chr3_3:1561523-1561542 None:intergenic 30.0%
! GTTTACCTATTGTTGTTGTT+TGG - chr3_3:1561616-1561635 None:intergenic 30.0%
! TGTAAGAAATCTGAAGTCAC+AGG - chr3_3:1558157-1558176 None:intergenic 35.0%
ACTTCCACTTTCAAGATCAA+TGG + chr3_3:1558309-1558328 Msa0437640:exon 35.0%
! GGTAGAACAACAAGTTCTAA+TGG + chr3_3:1558390-1558409 Msa0437640:CDS 35.0%
GTTGAACTTCTTGTGAATGA+TGG - chr3_3:1558467-1558486 None:intergenic 35.0%
! AATCTTACTCAGCTTTATCC+TGG + chr3_3:1558631-1558650 Msa0437640:CDS 35.0%
ATCATAGTGCTTACGAATGT+TGG - chr3_3:1558683-1558702 None:intergenic 35.0%
! CCTTAATCTAAGATCGAATC+TGG - chr3_3:1558735-1558754 None:intergenic 35.0%
CCAGATTCGATCTTAGATTA+AGG + chr3_3:1558732-1558751 Msa0437640:intron 35.0%
! TTGATTGAAGAAGAGTGTGA+CGG + chr3_3:1559251-1559270 Msa0437640:CDS 35.0%
TGCTTCTACTTGTTCTTTCT+GGG + chr3_3:1559426-1559445 Msa0437640:CDS 35.0%
ATGTCAAGAGGAGAATTTCA+AGG + chr3_3:1559553-1559572 Msa0437640:CDS 35.0%
TGTCAAGAGGAGAATTTCAA+GGG + chr3_3:1559554-1559573 Msa0437640:CDS 35.0%
TTTGGAGAGATTGAAGAAGA+TGG + chr3_3:1559584-1559603 Msa0437640:CDS 35.0%
GAGATTGAAGAAGATGGTAA+TGG + chr3_3:1559590-1559609 Msa0437640:CDS 35.0%
! GCATTTCAAGCTGAATCTTT+TGG - chr3_3:1559649-1559668 None:intergenic 35.0%
ACTGGACACAATTCGTATAA+GGG + chr3_3:1559785-1559804 Msa0437640:CDS 35.0%
TTCGTATAAGGGAACATACA+TGG + chr3_3:1559796-1559815 Msa0437640:CDS 35.0%
TCGTATAAGGGAACATACAT+GGG + chr3_3:1559797-1559816 Msa0437640:CDS 35.0%
ATTCATATGAGTTCATGCTC+AGG + chr3_3:1559864-1559883 Msa0437640:CDS 35.0%
GTTTGTGTAGATGACAATCA+TGG + chr3_3:1559944-1559963 Msa0437640:CDS 35.0%
! TGTAAGAATTGCAGTTGATG+TGG + chr3_3:1560051-1560070 Msa0437640:CDS 35.0%
ACAGAATCCTCTGTGTATTA+AGG - chr3_3:1560123-1560142 None:intergenic 35.0%
TAATACACAGAGGATTCTGT+TGG + chr3_3:1560123-1560142 Msa0437640:CDS 35.0%
AGGATTCTGTTGGATAAACA+TGG + chr3_3:1560133-1560152 Msa0437640:CDS 35.0%
GGATTCTGTTGGATAAACAT+GGG + chr3_3:1560134-1560153 Msa0437640:CDS 35.0%
ACTATGAAACTGATGGTTAC+CGG + chr3_3:1560218-1560237 Msa0437640:CDS 35.0%
! ACTGCTGAGTATGAAAGTTT+TGG + chr3_3:1560294-1560313 Msa0437640:intron 35.0%
TGTCTTTCCTAAATGCTATG+GGG - chr3_3:1560462-1560481 None:intergenic 35.0%
GTGTCTTTCCTAAATGCTAT+GGG - chr3_3:1560463-1560482 None:intergenic 35.0%
TGTGTCTTTCCTAAATGCTA+TGG - chr3_3:1560464-1560483 None:intergenic 35.0%
! GGGAATTAGAGATGTGTTTT+AGG + chr3_3:1560490-1560509 Msa0437640:intron 35.0%
! CCTACTCGATACATTTTTCA+AGG - chr3_3:1560549-1560568 None:intergenic 35.0%
CCTTGAAAAATGTATCGAGT+AGG + chr3_3:1560546-1560565 Msa0437640:intron 35.0%
GACAACACCTTACACATTTA+AGG - chr3_3:1560585-1560604 None:intergenic 35.0%
! TTGGCTTTCATCAGTTAGTT+TGG - chr3_3:1560711-1560730 None:intergenic 35.0%
ACTGATGAAAGCCAAATTTG+AGG + chr3_3:1560716-1560735 Msa0437640:intron 35.0%
TGACAGTGTCACACAAATTT+AGG + chr3_3:1560810-1560829 Msa0437640:intron 35.0%
GACAGTGTCACACAAATTTA+GGG + chr3_3:1560811-1560830 Msa0437640:intron 35.0%
!! CTTTTAAGTGTAGGCTAGTA+TGG - chr3_3:1561031-1561050 None:intergenic 35.0%
! AAGCTTTATGTCACTTGTCT+CGG + chr3_3:1561051-1561070 Msa0437640:intron 35.0%
!!! TCCTCATTTTGGTTGAAAAC+AGG + chr3_3:1561321-1561340 Msa0437640:intron 35.0%
! ACCTGTTTTCAACCAAAATG+AGG - chr3_3:1561325-1561344 None:intergenic 35.0%
AACATTACTCATCCATGTCT+CGG - chr3_3:1561374-1561393 None:intergenic 35.0%
AGTCTTTAATGACAAAGTGC+TGG + chr3_3:1561533-1561552 Msa0437640:CDS 35.0%
CTAAAATTTCGGAGAAATCG+GGG - chr3_3:1561579-1561598 None:intergenic 35.0%
GCTAAAATTTCGGAGAAATC+GGG - chr3_3:1561580-1561599 None:intergenic 35.0%
CGCTAAAATTTCGGAGAAAT+CGG - chr3_3:1561581-1561600 None:intergenic 35.0%
ATACCAAACATTCCTTGTCA+AGG + chr3_3:1561682-1561701 Msa0437640:three_prime_UTR 35.0%
TACCAAACATTCCTTGTCAA+GGG + chr3_3:1561683-1561702 Msa0437640:three_prime_UTR 35.0%
! GAACAGTTACAAAAGCATAG+AGG - chr3_3:1561731-1561750 None:intergenic 35.0%
! AAATCTGAAGTCACAGGTGA+AGG - chr3_3:1558151-1558170 None:intergenic 40.0%
AATGTGTGAGTGAGGGATTT+GGG - chr3_3:1558288-1558307 None:intergenic 40.0%
GAAGCCATTGATCTTGAAAG+TGG - chr3_3:1558316-1558335 None:intergenic 40.0%
AAGATCAATGGCTTCAGCAT+TGG + chr3_3:1558321-1558340 Msa0437640:exon 40.0%
CAACAACGAAGAAGAAGACA+TGG + chr3_3:1558369-1558388 Msa0437640:CDS 40.0%
! TGTTGTTGGGTTGTGAAGAT+GGG - chr3_3:1558423-1558442 None:intergenic 40.0%
! TTGTTGTTGGGTTGTGAAGA+TGG - chr3_3:1558424-1558443 None:intergenic 40.0%
!! TGTGTTTTTGAGCGATGCAA+TGG - chr3_3:1558515-1558534 None:intergenic 40.0%
ACAACAGCAACAACACTTGT+CGG + chr3_3:1558572-1558591 Msa0437640:CDS 40.0%
! GAGTAGCAACAACCTTGTTT+GGG + chr3_3:1558594-1558613 Msa0437640:CDS 40.0%
! AGTAGCAACAACCTTGTTTG+GGG + chr3_3:1558595-1558614 Msa0437640:CDS 40.0%
ATGTTGGACATAAGCTTCTC+AGG - chr3_3:1558667-1558686 None:intergenic 40.0%
ACTATGATTCATTGCCTCCT+AGG + chr3_3:1558695-1558714 Msa0437640:CDS 40.0%
GAATGAGATTTGTACCTAGG+AGG - chr3_3:1558712-1558731 None:intergenic 40.0%
TGGGAATGAGATTTGTACCT+AGG - chr3_3:1558715-1558734 None:intergenic 40.0%
!! ATTGAGCAAGCTTTGGAAGA+TGG + chr3_3:1559215-1559234 Msa0437640:CDS 40.0%
!! TTGAGCAAGCTTTGGAAGAT+GGG + chr3_3:1559216-1559235 Msa0437640:CDS 40.0%
CTTGCAACTCTCCAATTTCA+TGG + chr3_3:1559315-1559334 Msa0437640:CDS 40.0%
CTGAATCTTCTTGCAGCAAA+TGG - chr3_3:1559372-1559391 None:intergenic 40.0%
! AAGTAGAAGCACGATTCCAA+GGG - chr3_3:1559417-1559436 None:intergenic 40.0%
GTGCTTCTACTTGTTCTTTC+TGG + chr3_3:1559425-1559444 Msa0437640:CDS 40.0%
GCTTCTACTTGTTCTTTCTG+GGG + chr3_3:1559427-1559446 Msa0437640:CDS 40.0%
GTCAAGAGGAGAATTTCAAG+GGG + chr3_3:1559555-1559574 Msa0437640:CDS 40.0%
AATTTCAAGGGGAGAGAGTT+TGG + chr3_3:1559566-1559585 Msa0437640:CDS 40.0%
!! GATGGTAATGGTGTATACTG+CGG + chr3_3:1559602-1559621 Msa0437640:CDS 40.0%
AATGGTGTATACTGCGGAAA+CGG + chr3_3:1559608-1559627 Msa0437640:CDS 40.0%
TGAAAAGACGAATTCGGCAA+GGG - chr3_3:1559671-1559690 None:intergenic 40.0%
ATGAAAAGACGAATTCGGCA+AGG - chr3_3:1559672-1559691 None:intergenic 40.0%
! TTCATGTATCGGTAGATGAG+TGG + chr3_3:1559687-1559706 Msa0437640:CDS 40.0%
ATGCGGATGAGATACAGAAA+TGG + chr3_3:1559726-1559745 Msa0437640:CDS 40.0%
ACAGAAATGGTTGTTGAGCT+CGG + chr3_3:1559739-1559758 Msa0437640:CDS 40.0%
! CTCGGATAGTCTCGAATTTT+CGG + chr3_3:1559757-1559776 Msa0437640:CDS 40.0%
GACTGGACACAATTCGTATA+AGG + chr3_3:1559784-1559803 Msa0437640:CDS 40.0%
CGTATAAGGGAACATACATG+GGG + chr3_3:1559798-1559817 Msa0437640:CDS 40.0%
ACATACATGGGGAAAAGAGT+TGG + chr3_3:1559809-1559828 Msa0437640:CDS 40.0%
! TTGGCATTGAGAATCTCAGA+GGG + chr3_3:1559828-1559847 Msa0437640:CDS 40.0%
! CTGCTAGAATTGATGACATG+TGG + chr3_3:1559893-1559912 Msa0437640:CDS 40.0%
TCTACACAAACACCGCAAAA+CGG - chr3_3:1559935-1559954 None:intergenic 40.0%
ATGCGTAGTGACGAAATTCA+TGG + chr3_3:1559970-1559989 Msa0437640:CDS 40.0%
GTAGTGACGAAATTCATGGA+AGG + chr3_3:1559974-1559993 Msa0437640:CDS 40.0%
GAAATTCATGGAAGGTGGAT+CGG + chr3_3:1559982-1560001 Msa0437640:CDS 40.0%
GAACAAGAAGCTTCAGAACA+AGG + chr3_3:1560024-1560043 Msa0437640:CDS 40.0%
ACAGAGACCTTAATACACAG+AGG + chr3_3:1560113-1560132 Msa0437640:CDS 40.0%
TTTCATAGTCCATTGCCTCT+TGG - chr3_3:1560207-1560226 None:intergenic 40.0%
!! GCAATGGACTATGAAACTGA+TGG + chr3_3:1560211-1560230 Msa0437640:CDS 40.0%
TTCTGTCAAAAGAACGCTCT+AGG - chr3_3:1560391-1560410 None:intergenic 40.0%
!! GGGCTTTAGATTAGGATTCT+AGG - chr3_3:1560442-1560461 None:intergenic 40.0%
!! ATGCTATGGGGCTTTAGATT+AGG - chr3_3:1560450-1560469 None:intergenic 40.0%
! TCTAAAGCCCCATAGCATTT+AGG + chr3_3:1560452-1560471 Msa0437640:intron 40.0%
GTGTCTTCCGTTAATCGATT+TGG - chr3_3:1560679-1560698 None:intergenic 40.0%
! GTCACTTTGGTCCTCAAATT+TGG - chr3_3:1560730-1560749 None:intergenic 40.0%
! GTGTCTTTTGTTGGTCACTT+TGG - chr3_3:1560743-1560762 None:intergenic 40.0%
!! GTATGGTGTTGTGTTTCACA+TGG - chr3_3:1561014-1561033 None:intergenic 40.0%
GGTCCATATGGAATCATTTC+AGG - chr3_3:1561186-1561205 None:intergenic 40.0%
GGTTGAAAACAGGTAATCTC+AGG + chr3_3:1561331-1561350 Msa0437640:intron 40.0%
GTAATTTGGGAGATGGTATC+CGG + chr3_3:1561409-1561428 Msa0437640:CDS 40.0%
TGCGACCAAACAACAACAAT+AGG + chr3_3:1561608-1561627 Msa0437640:CDS 40.0%
TGTATGAAACTCCCTTGACA+AGG - chr3_3:1561697-1561716 None:intergenic 40.0%
GATGGCAAAGACATCATAAG+AGG - chr3_3:1561805-1561824 None:intergenic 40.0%
! GTGGTGGTTGGTTATGGAAA+CGG - chr3_3:1558233-1558252 None:intergenic 45.0%
TGTGGAGGAGAAGAAGAAGA+AGG - chr3_3:1558258-1558277 None:intergenic 45.0%
GATTTGGGAAGAATGTGTGG+AGG - chr3_3:1558273-1558292 None:intergenic 45.0%
AGGGATTTGGGAAGAATGTG+TGG - chr3_3:1558276-1558295 None:intergenic 45.0%
GAATGTGTGAGTGAGGGATT+TGG - chr3_3:1558289-1558308 None:intergenic 45.0%
GGAAGTGAATGTGTGAGTGA+GGG - chr3_3:1558295-1558314 None:intergenic 45.0%
TGGAAGTGAATGTGTGAGTG+AGG - chr3_3:1558296-1558315 None:intergenic 45.0%
! TGGCTTCAGCATTGGAATGT+TGG + chr3_3:1558329-1558348 Msa0437640:CDS 45.0%
TGTCGTGTTTGGAAGAATCG+AGG - chr3_3:1558549-1558568 None:intergenic 45.0%
! GCTGTTGTTGTTGTCGTGTT+TGG - chr3_3:1558560-1558579 None:intergenic 45.0%
GGAGTAGCAACAACCTTGTT+TGG + chr3_3:1558593-1558612 Msa0437640:CDS 45.0%
TGACAACAGTTCCCCAAACA+AGG - chr3_3:1558609-1558628 None:intergenic 45.0%
ACATAAGCTTCTCAGGAAGC+TGG - chr3_3:1558660-1558679 None:intergenic 45.0%
CTGAATTTGATTGCCACGTG+AGG + chr3_3:1559059-1559078 Msa0437640:intron 45.0%
CAAGCTGATTGAGCAAGCTT+TGG + chr3_3:1559208-1559227 Msa0437640:CDS 45.0%
GACATTGCAGGCCATGAAAT+TGG - chr3_3:1559329-1559348 None:intergenic 45.0%
GAGAAGAAAAGTCTCACCCT+TGG + chr3_3:1559398-1559417 Msa0437640:CDS 45.0%
! CAAGTAGAAGCACGATTCCA+AGG - chr3_3:1559418-1559437 None:intergenic 45.0%
!! CTGGTCAGGATAAGTTGGTA+AGG + chr3_3:1559450-1559469 Msa0437640:CDS 45.0%
!! AGGATAAGTTGGTAAGGACC+AGG + chr3_3:1559456-1559475 Msa0437640:CDS 45.0%
!! GGATAAGTTGGTAAGGACCA+GGG + chr3_3:1559457-1559476 Msa0437640:CDS 45.0%
GCTATGAAGAAGCCTAAAGC+CGG + chr3_3:1559500-1559519 Msa0437640:CDS 45.0%
AAAAGGAAGCTTCACACCAC+CGG - chr3_3:1559522-1559541 None:intergenic 45.0%
! GTGGTGTGAAGCTTCCTTTT+GGG + chr3_3:1559522-1559541 Msa0437640:CDS 45.0%
ATGGTGTATACTGCGGAAAC+GGG + chr3_3:1559609-1559628 Msa0437640:CDS 45.0%
GCAGACTATTCAGACAGATG+CGG + chr3_3:1559709-1559728 Msa0437640:CDS 45.0%
! CTCGAATTTTCGGAACAGAC+TGG + chr3_3:1559767-1559786 Msa0437640:CDS 45.0%
! GTTGGCATTGAGAATCTCAG+AGG + chr3_3:1559827-1559846 Msa0437640:CDS 45.0%
! AATCTCAGAGGGTGTGACAA+AGG + chr3_3:1559839-1559858 Msa0437640:CDS 45.0%
! ATCTCAGAGGGTGTGACAAA+GGG + chr3_3:1559840-1559859 Msa0437640:CDS 45.0%
GTGACGAAATTCATGGAAGG+TGG + chr3_3:1559977-1559996 Msa0437640:CDS 45.0%
! AATTGCAGTTGATGTGGCTG+AGG + chr3_3:1560057-1560076 Msa0437640:CDS 45.0%
! ATTGCAGTTGATGTGGCTGA+GGG + chr3_3:1560058-1560077 Msa0437640:CDS 45.0%
ATGAAACTGATGGTTACCGG+TGG + chr3_3:1560221-1560240 Msa0437640:CDS 45.0%
! CGTGATTTGAAGCATACCTC+AGG - chr3_3:1560253-1560272 None:intergenic 45.0%
! TGTGAAAGCTTTATGGCGTG+CGG - chr3_3:1561209-1561228 None:intergenic 45.0%
CGGTATGGTAATTTGGGAGA+TGG + chr3_3:1561402-1561421 Msa0437640:CDS 45.0%
CACAGGCGAATATGCAGTAT+AGG - chr3_3:1561443-1561462 None:intergenic 45.0%
GAGTTTGTGGACAGTCCTTT+GGG - chr3_3:1561510-1561529 None:intergenic 45.0%
AGAGTTTGTGGACAGTCCTT+TGG - chr3_3:1561511-1561530 None:intergenic 45.0%
!! AGAAATCGGGGCGTTTTGAA+GGG - chr3_3:1561567-1561586 None:intergenic 45.0%
CTCCCTTGACAAGGAATGTT+TGG - chr3_3:1561688-1561707 None:intergenic 45.0%
! GTGGTTGGTTATGGAAACGG+TGG - chr3_3:1558230-1558249 None:intergenic 50.0%
!! AAGGTGGTGGTGGTTGGTTA+TGG - chr3_3:1558239-1558258 None:intergenic 50.0%
!! AAGAAGAAGGTGGTGGTGGT+TGG - chr3_3:1558245-1558264 None:intergenic 50.0%
! GAAGAAGAAGAAGGTGGTGG+TGG - chr3_3:1558249-1558268 None:intergenic 50.0%
GGAGAAGAAGAAGAAGGTGG+TGG - chr3_3:1558252-1558271 None:intergenic 50.0%
GGAGGAGAAGAAGAAGAAGG+TGG - chr3_3:1558255-1558274 None:intergenic 50.0%
ATTGCCACGTGAGGATTCAC+TGG + chr3_3:1559068-1559087 Msa0437640:intron 50.0%
TATGGGGGGCAGTTATTCTC+AGG + chr3_3:1559151-1559170 Msa0437640:intron 50.0%
!! AGCTTTGGAAGATGGGCAAG+CGG + chr3_3:1559223-1559242 Msa0437640:CDS 50.0%
GACGGTGATATGCAGCTTCA+AGG + chr3_3:1559269-1559288 Msa0437640:CDS 50.0%
TCCAATGCACTCGACATTGC+AGG - chr3_3:1559341-1559360 None:intergenic 50.0%
!! CTACTTGTTCTTTCTGGGGC+TGG + chr3_3:1559431-1559450 Msa0437640:CDS 50.0%
ATGAAGAAGCCTAAAGCCGG+TGG + chr3_3:1559503-1559522 Msa0437640:CDS 50.0%
! GGTGGTGTGAAGCTTCCTTT+TGG + chr3_3:1559521-1559540 Msa0437640:CDS 50.0%
! AAGCTTCCTTTTGGGCTCTG+TGG + chr3_3:1559530-1559549 Msa0437640:CDS 50.0%
TGACATCCACAGAGCCCAAA+AGG - chr3_3:1559539-1559558 None:intergenic 50.0%
! TTGCAGTTGATGTGGCTGAG+GGG + chr3_3:1560059-1560078 Msa0437640:CDS 50.0%
!! TAAACATGGGAGCGCTTGCT+TGG + chr3_3:1560147-1560166 Msa0437640:CDS 50.0%
!! AAACATGGGAGCGCTTGCTT+GGG + chr3_3:1560148-1560167 Msa0437640:CDS 50.0%
AGCGCTTGCTTGGGAGATAT+CGG + chr3_3:1560157-1560176 Msa0437640:CDS 50.0%
TGCTTGCAAGAGCAACCAAG+AGG + chr3_3:1560189-1560208 Msa0437640:CDS 50.0%
CAAGAGCAACCAAGAGGCAA+TGG + chr3_3:1560195-1560214 Msa0437640:CDS 50.0%
! TGAAAGCTTTATGGCGTGCG+GGG - chr3_3:1561207-1561226 None:intergenic 50.0%
! GTGAAAGCTTTATGGCGTGC+GGG - chr3_3:1561208-1561227 None:intergenic 50.0%
ATGTCTCGGTGACACTCTCA+GGG - chr3_3:1561360-1561379 None:intergenic 50.0%
TGCAGTATAGGCTGCTTCAC+CGG - chr3_3:1561431-1561450 None:intergenic 50.0%
TACTGCATATTCGCCTGTGC+AGG + chr3_3:1561444-1561463 Msa0437640:CDS 50.0%
!! CCTTTGGGATCTCAGGTCTA+AGG - chr3_3:1561495-1561514 None:intergenic 50.0%
CCTTAGACCTGAGATCCCAA+AGG + chr3_3:1561492-1561511 Msa0437640:CDS 50.0%
!!! GAAATCGGGGCGTTTTGAAG+GGG - chr3_3:1561566-1561585 None:intergenic 50.0%
!! GAGAAATCGGGGCGTTTTGA+AGG - chr3_3:1561568-1561587 None:intergenic 50.0%
TTCTCAGGAAGCTGGCTACC+AGG - chr3_3:1558652-1558671 None:intergenic 55.0%
AGTGCCAGTGAATCCTCACG+TGG - chr3_3:1559075-1559094 None:intergenic 55.0%
GCCTGCAATGTCGAGTGCAT+TGG + chr3_3:1559337-1559356 Msa0437640:CDS 55.0%
!! TGTTCTTTCTGGGGCTGGTC+AGG + chr3_3:1559436-1559455 Msa0437640:CDS 55.0%
!! TGGGGCTGGTCAGGATAAGT+TGG + chr3_3:1559445-1559464 Msa0437640:CDS 55.0%
TTTGAGCGCGCTTTCAACCC+TGG - chr3_3:1559477-1559496 None:intergenic 55.0%
!! AGCTTCACACCACCGGCTTT+AGG - chr3_3:1559515-1559534 None:intergenic 55.0%
TGGGCTCTGTGGATGTCAAG+AGG + chr3_3:1559541-1559560 Msa0437640:CDS 55.0%
AACTGATGGTTACCGGTGGC+TGG + chr3_3:1560225-1560244 Msa0437640:CDS 55.0%
CTCGGCATCATTGTGTGAGC+AGG + chr3_3:1561069-1561088 Msa0437640:intron 55.0%
CATGTCTCGGTGACACTCTC+AGG - chr3_3:1561361-1561380 None:intergenic 55.0%
!! CTGAGAGTGTCACCGAGACA+TGG + chr3_3:1561359-1561378 Msa0437640:CDS 55.0%
! GCAGTAGGCATTGCTGCTTG+TGG + chr3_3:1561469-1561488 Msa0437640:CDS 55.0%
!! GGACAGTCCTTTGGGATCTC+AGG - chr3_3:1561502-1561521 None:intergenic 55.0%
GGGGGCAGTTATTCTCAGGC+CGG + chr3_3:1559155-1559174 Msa0437640:intron 60.0%
ATACCTCAGGAGCCAGCCAC+CGG - chr3_3:1560240-1560259 None:intergenic 60.0%
TATGGCGTGCGGGGTCCATA+TGG - chr3_3:1561198-1561217 None:intergenic 60.0%
ATGCCTACTGCTGCCTGCAC+AGG - chr3_3:1561460-1561479 None:intergenic 60.0%
! TTACCGGTGGCTGGCTCCTG+AGG + chr3_3:1560234-1560253 Msa0437640:CDS 65.0%
TCGCCTGTGCAGGCAGCAGT+AGG + chr3_3:1561454-1561473 Msa0437640:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 1558138 1561854 1558138 ID=Msa0437640;Name=Msa0437640
chr3_3 mRNA 1558138 1561854 1558138 ID=Msa0437640-mRNA-1;Parent=Msa0437640;Name=Msa0437640-mRNA-1;_AED=0.00;_eAED=0.00;_QI=190|1|1|1|1|1|3|221|590
chr3_3 exon 1558138 1558716 1558138 ID=Msa0437640-mRNA-1:exon:143;Parent=Msa0437640-mRNA-1
chr3_3 exon 1559163 1560255 1559163 ID=Msa0437640-mRNA-1:exon:144;Parent=Msa0437640-mRNA-1
chr3_3 exon 1561343 1561854 1561343 ID=Msa0437640-mRNA-1:exon:145;Parent=Msa0437640-mRNA-1
chr3_3 five_prime_UTR 1558138 1558327 1558138 ID=Msa0437640-mRNA-1:five_prime_utr;Parent=Msa0437640-mRNA-1
chr3_3 CDS 1558328 1558716 1558328 ID=Msa0437640-mRNA-1:cds;Parent=Msa0437640-mRNA-1
chr3_3 CDS 1559163 1560255 1559163 ID=Msa0437640-mRNA-1:cds;Parent=Msa0437640-mRNA-1
chr3_3 CDS 1561343 1561633 1561343 ID=Msa0437640-mRNA-1:cds;Parent=Msa0437640-mRNA-1
chr3_3 three_prime_UTR 1561634 1561854 1561634 ID=Msa0437640-mRNA-1:three_prime_utr;Parent=Msa0437640-mRNA-1
Gene Sequence

>Msa0437640

ATGGCTTCAGCATTGGAATGTTGGTCTCGACGCAACAACAACAACAACGAAGAAGAAGACATGGTAGAACAACAAGTTCTAATGGAAACAAACCCATCTTCACAACCCAACAACAACAACAACAACAAAGAATCTTCCATCATTCACAAGAAGTTCAACAAACTCACACGCAATGTTTCTGAAGCCATTGCATCGCTCAAAAACACACTCAACATTAACCTCGATTCTTCCAAACACGACAACAACAACAGCAACAACACTTGTCGGAGTAGCAACAACCTTGTTTGGGGAACTGTTGTCAGAAATCTTACTCAGCTTTATCCTGGTAGCCAGCTTCCTGAGAAGCTTATGTCCAACATTCGTAAGCACTATGATTCATTGCCTCCTAGTTATTCTCAGGCCGGATTTGATGTTAAAGATGTGTTTATTCACATCAAGCTGATTGAGCAAGCTTTGGAAGATGGGCAAGCGGCGATTTTGATTGAAGAAGAGTGTGACGGTGATATGCAGCTTCAAGGATCCTTGTTTAAGTTGACATTTGCTTGCAACTCTCCAATTTCATGGCCTGCAATGTCGAGTGCATTGGATAGTTCTTCCATTTGCTGCAAGAAGATTCAGATATTTGAGAAGAAAAGTCTCACCCTTGGAATCGTGCTTCTACTTGTTCTTTCTGGGGCTGGTCAGGATAAGTTGGTAAGGACCAGGGTTGAAAGCGCGCTCAAATTTGCTATGAAGAAGCCTAAAGCCGGTGGTGTGAAGCTTCCTTTTGGGCTCTGTGGATGTCAAGAGGAGAATTTCAAGGGGAGAGAGTTTGGAGAGATTGAAGAAGATGGTAATGGTGTATACTGCGGAAACGGGTTTGAGAATTTGAGCCAAAAGATTCAGCTTGAAATGCCCTTGCCGAATTCGTCTTTTCATGTATCGGTAGATGAGTGGCAGACTATTCAGACAGATGCGGATGAGATACAGAAATGGTTGTTGAGCTCGGATAGTCTCGAATTTTCGGAACAGACTGGACACAATTCGTATAAGGGAACATACATGGGGAAAAGAGTTGGCATTGAGAATCTCAGAGGGTGTGACAAAGGGAATTCATATGAGTTCATGCTCAGGAAAGATCTGCTAGAATTGATGACATGTGGACATAAAAACATTTTGCCGTTTTGCGGTGTTTGTGTAGATGACAATCATGGTTTATGCGTAGTGACGAAATTCATGGAAGGTGGATCGGTTCATGACTTAATTTCAAAGAACAAGAAGCTTCAGAACAAGGATATTGTAAGAATTGCAGTTGATGTGGCTGAGGGGATCAAGTTTTTGAATGATCATGGTGTTTCATACAGAGACCTTAATACACAGAGGATTCTGTTGGATAAACATGGGAGCGCTTGCTTGGGAGATATCGGCATAGTCACTGCTTGCAAGAGCAACCAAGAGGCAATGGACTATGAAACTGATGGTTACCGGTGGCTGGCTCCTGAGGTAATCTCAGGCGACCCTGAGAGTGTCACCGAGACATGGATGAGTAATGTTTATAGTTTCGGTATGGTAATTTGGGAGATGGTATCCGGTGAAGCAGCCTATACTGCATATTCGCCTGTGCAGGCAGCAGTAGGCATTGCTGCTTGTGGCCTTAGACCTGAGATCCCAAAGGACTGTCCACAAACTCTGAAGTCTTTAATGACAAAGTGCTGGAACAACACCCCTTCAAAACGCCCCGATTTCTCCGAAATTTTAGCGATATTGTTGCGACCAAACAACAACAATAGGTAA
Protein sequence

>Msa0437640

MASALECWSRRNNNNNEEEDMVEQQVLMETNPSSQPNNNNNNKESSIIHKKFNKLTRNVSEAIASLKNTLNINLDSSKHDNNNSNNTCRSSNNLVWGTVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPPSYSQAGFDVKDVFIHIKLIEQALEDGQAAILIEEECDGDMQLQGSLFKLTFACNSPISWPAMSSALDSSSICCKKIQIFEKKSLTLGIVLLLVLSGAGQDKLVRTRVESALKFAMKKPKAGGVKLPFGLCGCQEENFKGREFGEIEEDGNGVYCGNGFENLSQKIQLEMPLPNSSFHVSVDEWQTIQTDADEIQKWLLSSDSLEFSEQTGHNSYKGTYMGKRVGIENLRGCDKGNSYEFMLRKDLLELMTCGHKNILPFCGVCVDDNHGLCVVTKFMEGGSVHDLISKNKKLQNKDIVRIAVDVAEGIKFLNDHGVSYRDLNTQRILLDKHGSACLGDIGIVTACKSNQEAMDYETDGYRWLAPEVISGDPESVTETWMSNVYSFGMVIWEMVSGEAAYTAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNTPSKRPDFSEILAILLRPNNNNR*