Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437940 | XP_003592777.1 | 92.873 | 463 | 21 | 1 | 26 | 488 | 1 | 451 | 0.0 | 813 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437940 | sp|Q43088|RBCMT_PEA | 25.733 | 307 | 175 | 10 | 59 | 339 | 54 | 333 | 1.40e-15 | 82.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437940 | G7IF12 | 92.873 | 463 | 21 | 1 | 26 | 488 | 1 | 451 | 0.0 | 813 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0437940 | TR | SET |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045930 | Msa0437940 | 0.813618 | 2.336591e-51 | -8.615850e-47 |
| Msa0437940 | Msa0827130 | 0.914591 | 1.600739e-84 | -8.615850e-47 |
| Msa0437940 | Msa1170110 | 0.884199 | 2.350378e-71 | -8.615850e-47 |
| Msa0437940 | Msa1225220 | 0.879352 | 1.336417e-69 | -8.615850e-47 |
| Msa0437940 | Msa1334930 | 0.925043 | 3.126471e-90 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437940 | MtrunA17_Chr1g0213141 | 91.057 | 246 | 18 | 1 | 243 | 488 | 2 | 243 | 1.08e-154 | 439 |
| Msa0437940 | MtrunA17_Chr1g0213131 | 90.995 | 211 | 7 | 1 | 26 | 236 | 1 | 199 | 1.53e-117 | 343 |
| Msa0437940 | MtrunA17_Chr3g0120751 | 25.761 | 427 | 264 | 15 | 65 | 473 | 73 | 464 | 4.64e-19 | 89.7 |
| Msa0437940 | MtrunA17_Chr4g0042701 | 25.574 | 305 | 178 | 10 | 59 | 339 | 55 | 334 | 2.10e-14 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437940 | AT3G55080.1 | 53.244 | 447 | 193 | 4 | 43 | 487 | 26 | 458 | 5.75e-166 | 477 |
| Msa0437940 | AT3G55080.3 | 54.381 | 388 | 162 | 3 | 101 | 487 | 1 | 374 | 1.23e-145 | 422 |
| Msa0437940 | AT3G55080.5 | 54.381 | 388 | 162 | 3 | 101 | 487 | 1 | 374 | 1.23e-145 | 422 |
| Msa0437940 | AT3G55080.4 | 55.056 | 356 | 145 | 3 | 133 | 487 | 2 | 343 | 1.68e-132 | 387 |
| Msa0437940 | AT3G55080.2 | 54.294 | 361 | 145 | 4 | 133 | 487 | 2 | 348 | 5.70e-130 | 381 |
| Msa0437940 | AT3G07670.1 | 26.838 | 272 | 159 | 10 | 89 | 341 | 103 | 353 | 7.25e-17 | 83.6 |
| Msa0437940 | AT1G14030.1 | 24.601 | 313 | 170 | 12 | 59 | 339 | 49 | 327 | 3.62e-15 | 78.2 |
| Msa0437940 | AT3G07670.2 | 28.311 | 219 | 132 | 8 | 133 | 341 | 12 | 215 | 1.20e-14 | 75.9 |
Find 122 sgRNAs with CRISPR-Local
Find 849 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTATGCTCCGCAATTAAT+TGG | 0.158521 | 3_3:+1939234 | None:intergenic |
| CTGATAAAAGGTTTGATTTC+AGG | 0.171835 | 3_3:+1950301 | None:intergenic |
| CCTTCCATTTGTGTTAATTC+TGG | 0.181553 | 3_3:+1938774 | None:intergenic |
| CTCCGAGCCCTTTGCATCTT+TGG | 0.188607 | 3_3:+1940253 | None:intergenic |
| CCAACATGTTCACTGATAAA+AGG | 0.220029 | 3_3:+1950289 | None:intergenic |
| TCTTTCTTGTACCACTCTTC+AGG | 0.243444 | 3_3:-1939519 | Msa0437940:CDS |
| GAACGGAGTGAGATTGAAAT+TGG | 0.248498 | 3_3:+1950579 | None:intergenic |
| TTGACTTGATGGTCAGTAAA+TGG | 0.261539 | 3_3:-1938826 | Msa0437940:exon |
| CCGTCAAAGTTCAGTTTATC+AGG | 0.269055 | 3_3:-1949890 | Msa0437940:CDS |
| TCCTCTGCGTCACACAAAAT+TGG | 0.272658 | 3_3:-1940306 | Msa0437940:CDS |
| TTTCAGGTGCTTATAAGATA+TGG | 0.280416 | 3_3:-1940574 | Msa0437940:intron |
| GCTGGCTAGGCGCCCTTTAC+AGG | 0.304269 | 3_3:-1939306 | Msa0437940:CDS |
| TCCATTTCCAATTCTTCATA+TGG | 0.311025 | 3_3:-1950497 | Msa0437940:CDS |
| TAACATTGAACTACACAAAA+TGG | 0.335955 | 3_3:+1938687 | None:intergenic |
| TATTATGCATCTCGGCTTGC+GGG | 0.336854 | 3_3:+1950088 | None:intergenic |
| GGAGTTTCCATATGAAGAAT+TGG | 0.337636 | 3_3:+1950490 | None:intergenic |
| TTATTTATGTTTACAATGTA+TGG | 0.346872 | 3_3:-1950049 | Msa0437940:intron |
| GGAGCATAATGCAGCTATTA+TGG | 0.347092 | 3_3:-1939222 | Msa0437940:intron |
| GGGAAGCGTACCACAGAATA+AGG | 0.348533 | 3_3:+1950419 | None:intergenic |
| AATCACTTCGTGCACTTGCT+CGG | 0.349523 | 3_3:-1939544 | Msa0437940:CDS |
| CCTGATAAACTGAACTTTGA+CGG | 0.359051 | 3_3:+1949890 | None:intergenic |
| TCTGATCGTGATTATGTTCC+TGG | 0.368828 | 3_3:-1946598 | Msa0437940:CDS |
| CGAGCCATTCGTCTTCTAAC+AGG | 0.372330 | 3_3:+1938919 | None:intergenic |
| AACGGAGTGAGATTGAAATT+GGG | 0.377803 | 3_3:+1950580 | None:intergenic |
| TGAAGAATTGGAAATGGAAA+TGG | 0.385769 | 3_3:+1950502 | None:intergenic |
| CTTTGTTCATATCCTGTAAA+GGG | 0.388424 | 3_3:+1939294 | None:intergenic |
| CCCTTTGCATCTTTGGTTGG+AGG | 0.393470 | 3_3:+1940260 | None:intergenic |
| GTGAAGTCTGCTGGAGGAAA+AGG | 0.398194 | 3_3:-1939581 | Msa0437940:CDS |
| CTTTCTTGTACCACTCTTCA+GGG | 0.401046 | 3_3:-1939518 | Msa0437940:intron |
| TCCATATGAAGAATTGGAAA+TGG | 0.402663 | 3_3:+1950496 | None:intergenic |
| AGATTGAATTCCGCTGGGTT+GGG | 0.423705 | 3_3:-1938749 | Msa0437940:three_prime_UTR |
| GAGCCCTTTGCATCTTTGGT+TGG | 0.427651 | 3_3:+1940257 | None:intergenic |
| ATCACTTCGTGCACTTGCTC+GGG | 0.429403 | 3_3:-1939543 | Msa0437940:CDS |
| ACCTGATCATAAATGTTGTA+TGG | 0.431705 | 3_3:+1940505 | None:intergenic |
| TCCATACAACATTTATGATC+AGG | 0.435626 | 3_3:-1940506 | Msa0437940:intron |
| ATTTCAGGAGGGAGATTATC+CGG | 0.436105 | 3_3:+1950316 | None:intergenic |
| AATGCCAGAGCTTAACCATT+TGG | 0.439954 | 3_3:-1939357 | Msa0437940:intron |
| TGATTATGTTCCTGGTGAAC+AGG | 0.442198 | 3_3:-1946590 | Msa0437940:intron |
| CATAGGGAGGTGAAGTCTGC+TGG | 0.442386 | 3_3:-1939590 | Msa0437940:intron |
| TCTCTGATTGTGATATCAAA+TGG | 0.443234 | 3_3:+1938624 | None:intergenic |
| TCTTTGTTCATATCCTGTAA+AGG | 0.450034 | 3_3:+1939293 | None:intergenic |
| TTCAAATGCTACATTGATGC+TGG | 0.452747 | 3_3:-1940545 | Msa0437940:CDS |
| GCGTTGCAACCCTCCGTCGC+TGG | 0.456902 | 3_3:-1950646 | Msa0437940:CDS |
| CAGTAAATGGCTACAGCCAC+AGG | 0.457928 | 3_3:-1938813 | Msa0437940:three_prime_UTR |
| CCAAAAGTCTCAAATTGAAA+AGG | 0.459340 | 3_3:-1949857 | Msa0437940:CDS |
| GCTACATTGATGCTGGACTT+TGG | 0.464448 | 3_3:-1940538 | Msa0437940:CDS |
| TAGGCCAGAATTAACACAAA+TGG | 0.465139 | 3_3:-1938778 | Msa0437940:three_prime_UTR |
| TGTGTCTGTCTCGGTCAAAA+TGG | 0.468317 | 3_3:+1950723 | None:intergenic |
| CAAATCTGCTTCTACCTGGC+TGG | 0.469867 | 3_3:-1938866 | Msa0437940:CDS |
| AATGGAAATGGAAGAAGAAA+TGG | 0.471582 | 3_3:+1950514 | None:intergenic |
| AAACTGATGGTAGGCTGGCT+AGG | 0.476607 | 3_3:-1939319 | Msa0437940:CDS |
| CAGATTTCTTGAATCATGAC+GGG | 0.480634 | 3_3:-1947196 | Msa0437940:CDS |
| GAGATTGAATTCCGCTGGGT+TGG | 0.481228 | 3_3:-1938750 | Msa0437940:three_prime_UTR |
| TGAGATTGAAATTGGGGAGA+AGG | 0.485886 | 3_3:+1950587 | None:intergenic |
| GCTTCTAAATCAATACAAAC+CGG | 0.487852 | 3_3:-1950461 | Msa0437940:CDS |
| AACCAAAGATGCAAAGGGCT+CGG | 0.490231 | 3_3:-1940255 | Msa0437940:CDS |
| CAATCAGAGAGATATATATC+TGG | 0.492192 | 3_3:-1938611 | Msa0437940:three_prime_UTR |
| GTGCAGCCTCCGTGACCAAA+TGG | 0.495854 | 3_3:+1939342 | None:intergenic |
| AATCCACAAGAATTTGGGCC+AGG | 0.496147 | 3_3:-1950236 | Msa0437940:intron |
| CATACTTAGGTATATCGTAC+TGG | 0.499200 | 3_3:+1940330 | None:intergenic |
| GACCAGTTGGCTCTAGAGCA+TGG | 0.502799 | 3_3:-1947328 | Msa0437940:intron |
| AAGGTGAGATTGAATTCCGC+TGG | 0.503828 | 3_3:-1938755 | Msa0437940:three_prime_UTR |
| AAGCACAAAGGGTTTATCTC+TGG | 0.505327 | 3_3:-1947303 | Msa0437940:intron |
| TGCACAAACTGATGGTAGGC+TGG | 0.508432 | 3_3:-1939324 | Msa0437940:CDS |
| ACGGAGTGAGATTGAAATTG+GGG | 0.512634 | 3_3:+1950581 | None:intergenic |
| ACCAGTTGGCTCTAGAGCAT+GGG | 0.517262 | 3_3:-1947327 | Msa0437940:intron |
| GCAAGCCGAGATGCATAATA+CGG | 0.530146 | 3_3:-1950085 | Msa0437940:CDS |
| GTATTATGCATCTCGGCTTG+CGG | 0.530651 | 3_3:+1950087 | None:intergenic |
| AGAGCATGGGGAAGCACAAA+GGG | 0.532315 | 3_3:-1947314 | Msa0437940:CDS |
| TTCTCAAATCTGCTTCTACC+TGG | 0.536097 | 3_3:-1938870 | Msa0437940:CDS |
| TGAAGTCTGCTGGAGGAAAA+GGG | 0.538297 | 3_3:-1939580 | Msa0437940:CDS |
| GCCTCCAACCAAAGATGCAA+AGG | 0.545403 | 3_3:-1940261 | Msa0437940:CDS |
| TGCGTTCAGTCACAGTGAGA+TGG | 0.545572 | 3_3:+1950684 | None:intergenic |
| ATAAAAGGTTTGATTTCAGG+AGG | 0.546686 | 3_3:+1950304 | None:intergenic |
| ACTTGCCGTATTATGCATCT+CGG | 0.546722 | 3_3:+1950080 | None:intergenic |
| TTCATGCATGCATGCGCACT+AGG | 0.547297 | 3_3:-1948902 | Msa0437940:intron |
| GAAGCTTTGTTCTCCAACCA+TGG | 0.548838 | 3_3:+1950542 | None:intergenic |
| AACTTGTAAAATGCAATCAC+CGG | 0.549061 | 3_3:+1950442 | None:intergenic |
| TAGTATTTGACCTGTTCACC+AGG | 0.550072 | 3_3:+1946580 | None:intergenic |
| GCAGATTTCTTGAATCATGA+CGG | 0.555755 | 3_3:-1947197 | Msa0437940:CDS |
| TTGTATGACAGGACTCTGAA+TGG | 0.556237 | 3_3:-1950134 | Msa0437940:intron |
| AATTAATTGGATGAATAATG+AGG | 0.556334 | 3_3:+1939247 | None:intergenic |
| TTACATATTAGTGTACGTAC+TGG | 0.563348 | 3_3:-1938586 | Msa0437940:three_prime_UTR |
| CCACAGGAGGACTATGAAGT+AGG | 0.565200 | 3_3:-1938797 | Msa0437940:three_prime_UTR |
| GCAAGTGCACGAAGTGATTG+TGG | 0.565446 | 3_3:+1939548 | None:intergenic |
| ATTATTCATCCAATTAATTG+CGG | 0.565451 | 3_3:-1939243 | Msa0437940:CDS |
| TTTACAAGTTCCTTATTCTG+TGG | 0.566855 | 3_3:-1950429 | Msa0437940:intron |
| CCTCCAACCAAAGATGCAAA+GGG | 0.571025 | 3_3:-1940260 | Msa0437940:CDS |
| AACAGGAAGTCTTTCACTCG+AGG | 0.574466 | 3_3:+1938936 | None:intergenic |
| ATTATGCATCTCGGCTTGCG+GGG | 0.583027 | 3_3:+1950089 | None:intergenic |
| TGACGCAGAGGATCATACTT+AGG | 0.583198 | 3_3:+1940317 | None:intergenic |
| GTCTGCTGGAGGAAAAGGGA+AGG | 0.583307 | 3_3:-1939576 | Msa0437940:CDS |
| GGAAATGGAAGAAGAAATGG+TGG | 0.583877 | 3_3:+1950517 | None:intergenic |
| TATTGATTTAGAAGCAAACA+AGG | 0.584991 | 3_3:+1950469 | None:intergenic |
| AAAACAGTAGTTCTCCAGCC+AGG | 0.585984 | 3_3:+1938852 | None:intergenic |
| GTACCTGGCCCAAATTCTTG+TGG | 0.590815 | 3_3:+1950233 | None:intergenic |
| ATGCAGAGACCAGCGACGGA+GGG | 0.595593 | 3_3:+1950637 | None:intergenic |
| AGTCACAGTGAGATGGAGAG+TGG | 0.599249 | 3_3:+1950691 | None:intergenic |
| ACGGAGGCTGCACAAACTGA+TGG | 0.603336 | 3_3:-1939332 | Msa0437940:CDS |
| AAGTGCAAACTTGATTGTGA+AGG | 0.605155 | 3_3:+1940217 | None:intergenic |
| TAGAGCATGGGGAAGCACAA+AGG | 0.605458 | 3_3:-1947315 | Msa0437940:CDS |
| AGAGCTTAACCATTTGGTCA+CGG | 0.610389 | 3_3:-1939351 | Msa0437940:CDS |
| AGGCTGCACAAACTGATGGT+AGG | 0.613383 | 3_3:-1939328 | Msa0437940:CDS |
| TTATGCATCTCGGCTTGCGG+GGG | 0.622308 | 3_3:+1950090 | None:intergenic |
| CCAGAATTAACACAAATGGA+AGG | 0.624311 | 3_3:-1938774 | Msa0437940:three_prime_UTR |
| AGTTGTGTATGTGTCTGTCT+CGG | 0.625565 | 3_3:+1950714 | None:intergenic |
| CCAGTTGGCTCTAGAGCATG+GGG | 0.627133 | 3_3:-1947326 | Msa0437940:intron |
| TGTTTACACACCCTGAAGAG+TGG | 0.628835 | 3_3:+1939508 | None:intergenic |
| CTGATTGTGATATCAAATGG+AGG | 0.630413 | 3_3:+1938627 | None:intergenic |
| ACTTCCTGTTAGAAGACGAA+TGG | 0.634423 | 3_3:-1938923 | Msa0437940:CDS |
| TAAAAGGTTTGATTTCAGGA+GGG | 0.637802 | 3_3:+1950305 | None:intergenic |
| CCTACTTCATAGTCCTCCTG+TGG | 0.641868 | 3_3:+1938797 | None:intergenic |
| AGGTGAGATTGAATTCCGCT+GGG | 0.649035 | 3_3:-1938754 | Msa0437940:three_prime_UTR |
| ATTTACTGACCATCAAGTCA+AGG | 0.654900 | 3_3:+1938828 | None:intergenic |
| TATGCAGAGACCAGCGACGG+AGG | 0.655904 | 3_3:+1950636 | None:intergenic |
| TCTGCTGGAGGAAAAGGGAA+GGG | 0.677166 | 3_3:-1939575 | Msa0437940:CDS |
| AGGGAGGTGAAGTCTGCTGG+AGG | 0.687293 | 3_3:-1939587 | Msa0437940:CDS |
| TAAATGGCTACAGCCACAGG+AGG | 0.691652 | 3_3:-1938810 | Msa0437940:three_prime_UTR |
| ATGGCTCGAGATCTCTTGCA+CGG | 0.704607 | 3_3:-1938904 | Msa0437940:CDS |
| CGGTATGCAGAGACCAGCGA+CGG | 0.706695 | 3_3:+1950633 | None:intergenic |
| TATAAGAATTCCCAACCCAG+CGG | 0.724246 | 3_3:+1938739 | None:intergenic |
| GCTTAACCATTTGGTCACGG+AGG | 0.739786 | 3_3:-1939348 | Msa0437940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTTATTTATGTTTG+TGG | - | chr3_3:1939314-1939333 | Msa0437940:CDS | 10.0% |
| !!! | TGTTTTTTTTATAGATATTT+TGG | - | chr3_3:1939338-1939357 | Msa0437940:CDS | 10.0% |
| !! | AATGAAGAAATTAAATTAAA+TGG | - | chr3_3:1939689-1939708 | Msa0437940:intron | 10.0% |
| !! | TTTAAGTATATAAATTAAGT+TGG | - | chr3_3:1939766-1939785 | Msa0437940:intron | 10.0% |
| !! | CCAATTAATTAATAAAATAT+TGG | + | chr3_3:1940780-1940799 | None:intergenic | 10.0% |
| !!! | CCAATATTTTATTAATTAAT+TGG | - | chr3_3:1940777-1940796 | Msa0437940:intron | 10.0% |
| !!! | TAAATTTATTCTTTTTTTGA+AGG | + | chr3_3:1941154-1941173 | None:intergenic | 10.0% |
| !!! | AAATCTGAAATATTTTTATT+TGG | + | chr3_3:1945438-1945457 | None:intergenic | 10.0% |
| !! | TTATTTATGTTTACAATGTA+TGG | - | chr3_3:1939225-1939244 | Msa0437940:CDS | 15.0% |
| !!! | TTTAAAGAATCAATTTTGTT+TGG | - | chr3_3:1941080-1941099 | Msa0437940:intron | 15.0% |
| !!! | ATTTTAACAGTGTAAAAATA+GGG | - | chr3_3:1941556-1941575 | Msa0437940:intron | 15.0% |
| !! | AAAAGAAAAAGAAAACTAAA+TGG | - | chr3_3:1942424-1942443 | Msa0437940:intron | 15.0% |
| !! | CTTATGTATTCTAATAATTT+AGG | - | chr3_3:1942459-1942478 | Msa0437940:intron | 15.0% |
| !! | TAATTTAACTGAGAAAAATA+GGG | + | chr3_3:1942893-1942912 | None:intergenic | 15.0% |
| !! | TTAATTTAACTGAGAAAAAT+AGG | + | chr3_3:1942894-1942913 | None:intergenic | 15.0% |
| !!! | TATAAATTTCTTAAGAGTTT+TGG | - | chr3_3:1946015-1946034 | Msa0437940:intron | 15.0% |
| !!! | ATAAATTTCTTAAGAGTTTT+GGG | - | chr3_3:1946016-1946035 | Msa0437940:intron | 15.0% |
| !!! | TATTTTTATTCTAGTATATG+TGG | - | chr3_3:1947256-1947275 | Msa0437940:intron | 15.0% |
| !! | TTGTTTAAAAATATAGTAAC+AGG | + | chr3_3:1948594-1948613 | None:intergenic | 15.0% |
| !! | AAACATAAAAAATATGCAAA+GGG | + | chr3_3:1949577-1949596 | None:intergenic | 15.0% |
| !!! | ATTTTTTATGTTTGATATCT+TGG | - | chr3_3:1949584-1949603 | Msa0437940:intron | 15.0% |
| !!! | AGTTATTTGTTAATAATTAC+AGG | - | chr3_3:1949814-1949833 | Msa0437940:intron | 15.0% |
| !! | TCTAATTTATTGTTTACTAT+TGG | - | chr3_3:1950094-1950113 | Msa0437940:CDS | 15.0% |
| !! | AGAAGAAAAATTGAAAACAA+CGG | + | chr3_3:1938664-1938683 | None:intergenic | 20.0% |
| !! | TAACAATAGAGAATTGAAAT+GGG | + | chr3_3:1938878-1938897 | None:intergenic | 20.0% |
| !! | TTAACAATAGAGAATTGAAA+TGG | + | chr3_3:1938879-1938898 | None:intergenic | 20.0% |
| !! | TTTACAATGTTATAGGAATT+AGG | - | chr3_3:1939714-1939733 | Msa0437940:intron | 20.0% |
| !! | ATTGAAAAACCTGAAATAAA+AGG | + | chr3_3:1940314-1940333 | None:intergenic | 20.0% |
| !!! | AGAATCATCATTTTATAATC+AGG | - | chr3_3:1940814-1940833 | Msa0437940:intron | 20.0% |
| !!! | ATTTTTAACTCTCTTTCTAT+TGG | - | chr3_3:1940848-1940867 | Msa0437940:intron | 20.0% |
| !!! | TTTTTAACTCTCTTTCTATT+GGG | - | chr3_3:1940849-1940868 | Msa0437940:intron | 20.0% |
| !! | GATTAAACAAAAACTGTATT+TGG | - | chr3_3:1941036-1941055 | Msa0437940:intron | 20.0% |
| !!! | CAAATTTTAGATTCCTTATT+TGG | - | chr3_3:1941383-1941402 | Msa0437940:intron | 20.0% |
| !! | CATATTATCAATACCAAATA+AGG | + | chr3_3:1941399-1941418 | None:intergenic | 20.0% |
| !! | TTATCAAGATTCAAGATATT+TGG | + | chr3_3:1941466-1941485 | None:intergenic | 20.0% |
| !!! | GATTTTAACAGTGTAAAAAT+AGG | - | chr3_3:1941555-1941574 | Msa0437940:intron | 20.0% |
| !!! | TTGGAGTAATTTAGTTTTTA+TGG | - | chr3_3:1941645-1941664 | Msa0437940:intron | 20.0% |
| !! | GGTTAGCAAATAAATTAATA+GGG | + | chr3_3:1942039-1942058 | None:intergenic | 20.0% |
| !! | TGGTTAGCAAATAAATTAAT+AGG | + | chr3_3:1942040-1942059 | None:intergenic | 20.0% |
| !! | GTTATTGAAGCTTAATTAAT+TGG | - | chr3_3:1942184-1942203 | Msa0437940:intron | 20.0% |
| !! | CAAAATTAAAATTGAAGTGT+TGG | + | chr3_3:1942637-1942656 | None:intergenic | 20.0% |
| !! | CTTGAATATTGAATCTTTAT+TGG | - | chr3_3:1942819-1942838 | Msa0437940:intron | 20.0% |
| !! | GATAATTTACCATTAAGATT+TGG | - | chr3_3:1942841-1942860 | Msa0437940:intron | 20.0% |
| !! | TTATACAATCATTAAACAGA+AGG | + | chr3_3:1942952-1942971 | None:intergenic | 20.0% |
| !! | AAAAGATAAATTCCATTATG+TGG | - | chr3_3:1943224-1943243 | Msa0437940:intron | 20.0% |
| !!! | ATTCTCATTTAAGTTTTAGT+AGG | + | chr3_3:1943308-1943327 | None:intergenic | 20.0% |
| !!! | TATTGAGTTTTAAAGTAGTA+GGG | + | chr3_3:1944960-1944979 | None:intergenic | 20.0% |
| !!! | TTATTGAGTTTTAAAGTAGT+AGG | + | chr3_3:1944961-1944980 | None:intergenic | 20.0% |
| !! | TTCCTTAATGTATTTAGATT+GGG | + | chr3_3:1947432-1947451 | None:intergenic | 20.0% |
| !! | AGCAAGACAAATATAAAATT+AGG | + | chr3_3:1949086-1949105 | None:intergenic | 20.0% |
| !! | CAAACATAAAAAATATGCAA+AGG | + | chr3_3:1949578-1949597 | None:intergenic | 20.0% |
| !!! | ACAAGTTTGACAATTTTTTT+GGG | + | chr3_3:1949848-1949867 | None:intergenic | 20.0% |
| !!! | AACAAGTTTGACAATTTTTT+TGG | + | chr3_3:1949849-1949868 | None:intergenic | 20.0% |
| !! | AATTAATTGGATGAATAATG+AGG | + | chr3_3:1950030-1950049 | None:intergenic | 20.0% |
| !! | ATTATTCATCCAATTAATTG+CGG | - | chr3_3:1950031-1950050 | Msa0437940:intron | 20.0% |
| !! | GCTAGTCAAATAAAAATATA+AGG | - | chr3_3:1950203-1950222 | Msa0437940:intron | 20.0% |
| !!! | TTGGGAATTCTTATATTTTT+TGG | - | chr3_3:1950543-1950562 | Msa0437940:CDS | 20.0% |
| !!! | TGGGAATTCTTATATTTTTT+GGG | - | chr3_3:1950544-1950563 | Msa0437940:CDS | 20.0% |
| !!! | TATTGATTTAGAAGCAAACA+AGG | + | chr3_3:1938808-1938827 | None:intergenic | 25.0% |
| !! | TCTTTTAATCCACAAGAATT+TGG | - | chr3_3:1939032-1939051 | Msa0437940:intron | 25.0% |
| !! | CTTTTAATCCACAAGAATTT+GGG | - | chr3_3:1939033-1939052 | Msa0437940:intron | 25.0% |
| ! | TGACATTTAAACAAATAAGC+TGG | + | chr3_3:1939281-1939300 | None:intergenic | 25.0% |
| !! | TCAAATTGAAAAGGACTTTT+TGG | - | chr3_3:1939426-1939445 | Msa0437940:intron | 25.0% |
| ! | AGAATCATAATTCACGTATA+TGG | + | chr3_3:1939514-1939533 | None:intergenic | 25.0% |
| !! | AATGGACTTTACAATGTTAT+AGG | - | chr3_3:1939707-1939726 | Msa0437940:intron | 25.0% |
| ! | AATGTTATAGGAATTAGGAT+TGG | - | chr3_3:1939719-1939738 | Msa0437940:intron | 25.0% |
| ! | ATGTTATAGGAATTAGGATT+GGG | - | chr3_3:1939720-1939739 | Msa0437940:intron | 25.0% |
| ! | TTACACACAAATCAAGATTT+AGG | + | chr3_3:1939794-1939813 | None:intergenic | 25.0% |
| !!! | TAGGCATTTTTTTAGCATAT+TGG | - | chr3_3:1939869-1939888 | Msa0437940:intron | 25.0% |
| !!! | TTTTTTTAGCATATTGGAGT+TGG | - | chr3_3:1939875-1939894 | Msa0437940:intron | 25.0% |
| !!! | TTTTTTAGCATATTGGAGTT+GGG | - | chr3_3:1939876-1939895 | Msa0437940:intron | 25.0% |
| ! | CAGTTTATTATTTGAGAGTT+TGG | - | chr3_3:1940131-1940150 | Msa0437940:intron | 25.0% |
| ! | CTGAAATAAAAGGACAAAAT+TGG | + | chr3_3:1940304-1940323 | None:intergenic | 25.0% |
| !!! | CAATTTTGTCCTTTTATTTC+AGG | - | chr3_3:1940302-1940321 | Msa0437940:CDS | 25.0% |
| !! | CAATCATTTTGTCAAAGTTT+TGG | - | chr3_3:1940330-1940349 | Msa0437940:CDS | 25.0% |
| !!! | AAAGTTTTGGAGATTTTACT+TGG | - | chr3_3:1940343-1940362 | Msa0437940:intron | 25.0% |
| ! | GATATAATAGTCAGATAATC+TGG | + | chr3_3:1940708-1940727 | None:intergenic | 25.0% |
| ! | GAGTATAATTTATTGAACGT+GGG | + | chr3_3:1941182-1941201 | None:intergenic | 25.0% |
| ! | GTTCAATAAATTATACTCGA+TGG | - | chr3_3:1941184-1941203 | Msa0437940:intron | 25.0% |
| ! | TTAGAGAATTCCTTTAATAG+AGG | - | chr3_3:1941699-1941718 | Msa0437940:intron | 25.0% |
| ! | TTACAAAAGAGCCAAAAATA+TGG | + | chr3_3:1941822-1941841 | None:intergenic | 25.0% |
| ! | TGCAAATGCAATCTATAAAA+TGG | + | chr3_3:1942060-1942079 | None:intergenic | 25.0% |
| ! | CCATTGATAGATATAATGAA+AGG | + | chr3_3:1942165-1942184 | None:intergenic | 25.0% |
| ! | CCTTTCATTATATCTATCAA+TGG | - | chr3_3:1942162-1942181 | Msa0437940:intron | 25.0% |
| !! | GAATTTGACTTATATGTAGT+GGG | + | chr3_3:1942225-1942244 | None:intergenic | 25.0% |
| ! | ACATATAAGTCAAATTCCAT+CGG | - | chr3_3:1942228-1942247 | Msa0437940:intron | 25.0% |
| ! | CATGAGATTTAATATGACAA+CGG | + | chr3_3:1942279-1942298 | None:intergenic | 25.0% |
| !! | ATAGATCGAAAATTTTGTGT+AGG | - | chr3_3:1942325-1942344 | Msa0437940:intron | 25.0% |
| !! | TTAATTTTGCAATTATGTGC+AGG | - | chr3_3:1942648-1942667 | Msa0437940:intron | 25.0% |
| ! | TTGCAGAATAGAGAAAAAAT+AGG | + | chr3_3:1942798-1942817 | None:intergenic | 25.0% |
| ! | ATTCAATTCACAAATGAAGA+GGG | + | chr3_3:1943479-1943498 | None:intergenic | 25.0% |
| ! | TATTCAATTCACAAATGAAG+AGG | + | chr3_3:1943480-1943499 | None:intergenic | 25.0% |
| ! | ATGATACGAATTATCTTCAA+TGG | - | chr3_3:1943728-1943747 | Msa0437940:intron | 25.0% |
| !!! | ACAAGATTTTTGGTTATAGA+AGG | + | chr3_3:1944997-1945016 | None:intergenic | 25.0% |
| ! | TTACAAAACAATGATTAGCA+TGG | + | chr3_3:1945065-1945084 | None:intergenic | 25.0% |
| !!! | TCATTGTTTTGTAAAATCTC+AGG | - | chr3_3:1945071-1945090 | Msa0437940:intron | 25.0% |
| ! | AATGTTGAACACTTATCAAA+TGG | - | chr3_3:1945294-1945313 | Msa0437940:intron | 25.0% |
| !! | TTTGAACAGATATGATTTTG+TGG | + | chr3_3:1945716-1945735 | None:intergenic | 25.0% |
| ! | GAAATTTATAGTCTGGAAAT+TGG | + | chr3_3:1946005-1946024 | None:intergenic | 25.0% |
| ! | CTCTTAAGAAATTTATAGTC+TGG | + | chr3_3:1946012-1946031 | None:intergenic | 25.0% |
| ! | AGTTATAGGGTCTTAAAAAT+GGG | + | chr3_3:1946053-1946072 | None:intergenic | 25.0% |
| ! | AATATTTGTTTCCAAAGATG+TGG | - | chr3_3:1946164-1946183 | Msa0437940:intron | 25.0% |
| !!! | ACATTGAGTTTTAGTATGTA+GGG | + | chr3_3:1947237-1947256 | None:intergenic | 25.0% |
| !!! | TACATTGAGTTTTAGTATGT+AGG | + | chr3_3:1947238-1947257 | None:intergenic | 25.0% |
| ! | CTTCCTTAATGTATTTAGAT+TGG | + | chr3_3:1947433-1947452 | None:intergenic | 25.0% |
| !!! | AAACTTTGATAATTTTGTGC+TGG | + | chr3_3:1947507-1947526 | None:intergenic | 25.0% |
| ! | AGCACAAAATTATCAAAGTT+TGG | - | chr3_3:1947506-1947525 | Msa0437940:intron | 25.0% |
| ! | AGAATTCTTAGATACTTACA+AGG | - | chr3_3:1947677-1947696 | Msa0437940:intron | 25.0% |
| !! | TATTTTCTTTGTCAGAGAAA+AGG | - | chr3_3:1948067-1948086 | Msa0437940:intron | 25.0% |
| ! | ATTCAATTCACAAATGAAGA+GGG | + | chr3_3:1943479-1943498 | None:intergenic | 25.0% |
| ! | TATTCAATTCACAAATGAAG+AGG | + | chr3_3:1943480-1943499 | None:intergenic | 25.0% |
| !! | ATTGATAATCAAACAATGAC+AGG | + | chr3_3:1948636-1948655 | None:intergenic | 25.0% |
| ! | ATACTTGAAATCCAATTGAA+AGG | + | chr3_3:1948798-1948817 | None:intergenic | 25.0% |
| !! | ATTTCAAGTATCATACAATG+CGG | - | chr3_3:1948807-1948826 | Msa0437940:intron | 25.0% |
| ! | TTATTATGAATCAAGATAGC+TGG | + | chr3_3:1948893-1948912 | None:intergenic | 25.0% |
| !!! | CTGATTTTTTTACTGATTCT+TGG | - | chr3_3:1949127-1949146 | Msa0437940:intron | 25.0% |
| ! | TCATTGAATGTGCTTAATAT+TGG | + | chr3_3:1949296-1949315 | None:intergenic | 25.0% |
| ! | AAATGTCAAGATGTGATAAA+GGG | + | chr3_3:1949371-1949390 | None:intergenic | 25.0% |
| ! | TAAATGTCAAGATGTGATAA+AGG | + | chr3_3:1949372-1949391 | None:intergenic | 25.0% |
| ! | AAGTGAATATTGTTGGATAT+AGG | + | chr3_3:1949878-1949897 | None:intergenic | 25.0% |
| !! | TATCCAACAATATTCACTTT+TGG | - | chr3_3:1949879-1949898 | Msa0437940:CDS | 25.0% |
| ! | ATTCCAAAAGTGAATATTGT+TGG | + | chr3_3:1949885-1949904 | None:intergenic | 25.0% |
| !!! | ACTTTTGGAATTTGTATTGA+TGG | - | chr3_3:1949894-1949913 | Msa0437940:CDS | 25.0% |
| !! | TATTGTTTACTATTGGTTAC+TGG | - | chr3_3:1950101-1950120 | Msa0437940:CDS | 25.0% |
| ! | TACTTAAGTGTGTATGTATT+TGG | - | chr3_3:1950146-1950165 | Msa0437940:intron | 25.0% |
| !!! | AAGATCTTTGAAGTAACATA+TGG | + | chr3_3:1950243-1950262 | None:intergenic | 25.0% |
| ! | TAACATTGAACTACACAAAA+TGG | + | chr3_3:1950590-1950609 | None:intergenic | 25.0% |
| AATGGAAATGGAAGAAGAAA+TGG | + | chr3_3:1938763-1938782 | None:intergenic | 30.0% | |
| TGAAGAATTGGAAATGGAAA+TGG | + | chr3_3:1938775-1938794 | None:intergenic | 30.0% | |
| TCCATTTCCAATTCTTCATA+TGG | - | chr3_3:1938777-1938796 | Msa0437940:three_prime_UTR | 30.0% | |
| TCCATATGAAGAATTGGAAA+TGG | + | chr3_3:1938781-1938800 | None:intergenic | 30.0% | |
| GCTTCTAAATCAATACAAAC+CGG | - | chr3_3:1938813-1938832 | Msa0437940:three_prime_UTR | 30.0% | |
| AACTTGTAAAATGCAATCAC+CGG | + | chr3_3:1938835-1938854 | None:intergenic | 30.0% | |
| TTTACAAGTTCCTTATTCTG+TGG | - | chr3_3:1938845-1938864 | Msa0437940:CDS | 30.0% | |
| ! | TAAAAGGTTTGATTTCAGGA+GGG | + | chr3_3:1938972-1938991 | None:intergenic | 30.0% |
| ! | ATAAAAGGTTTGATTTCAGG+AGG | + | chr3_3:1938973-1938992 | None:intergenic | 30.0% |
| ! | CTGATAAAAGGTTTGATTTC+AGG | + | chr3_3:1938976-1938995 | None:intergenic | 30.0% |
| TGTTTACAATGTATGGTGTA+AGG | - | chr3_3:1939232-1939251 | Msa0437940:CDS | 30.0% | |
| !! | CCTTTTCAATTTGAGACTTT+TGG | + | chr3_3:1939420-1939439 | None:intergenic | 30.0% |
| CCAAAAGTCTCAAATTGAAA+AGG | - | chr3_3:1939417-1939436 | Msa0437940:intron | 30.0% | |
| AATGCAAATAAATGCAGACA+TGG | + | chr3_3:1939553-1939572 | None:intergenic | 30.0% | |
| AGTAATGCATTACCTATCTT+GGG | - | chr3_3:1939594-1939613 | Msa0437940:intron | 30.0% | |
| ! | ATCTTGTTATATCCCAAGAT+AGG | + | chr3_3:1939609-1939628 | None:intergenic | 30.0% |
| !!! | TTTTAGCCTTATTAATGCCT+AGG | - | chr3_3:1939845-1939864 | Msa0437940:intron | 30.0% |
| TTTCACTAAAAAGATCTCTG+AGG | + | chr3_3:1940063-1940082 | None:intergenic | 30.0% | |
| !! | TTTTGGAGATTTTACTTGGA+AGG | - | chr3_3:1940347-1940366 | Msa0437940:intron | 30.0% |
| ATGTACTTTATCAAGCATAC+TGG | + | chr3_3:1940429-1940448 | None:intergenic | 30.0% | |
| TGATCACTAAGATGTTACAA+TGG | + | chr3_3:1940611-1940630 | None:intergenic | 30.0% | |
| ATATGACTTAACCAGAAACT+AGG | + | chr3_3:1940752-1940771 | None:intergenic | 30.0% | |
| ! | ATCTAAAGCAAATGGATACT+TGG | + | chr3_3:1940957-1940976 | None:intergenic | 30.0% |
| ! | CTATCAAGATCTAAAGCAAA+TGG | + | chr3_3:1940965-1940984 | None:intergenic | 30.0% |
| CGAGTATAATTTATTGAACG+TGG | + | chr3_3:1941183-1941202 | None:intergenic | 30.0% | |
| TTAACAGTGTAAAAATAGGG+TGG | - | chr3_3:1941559-1941578 | Msa0437940:intron | 30.0% | |
| TAACAGTGTAAAAATAGGGT+GGG | - | chr3_3:1941560-1941579 | Msa0437940:intron | 30.0% | |
| TCTTGATGAAATTGTGTTGT+TGG | - | chr3_3:1941604-1941623 | Msa0437940:intron | 30.0% | |
| ! | CTTGATGAAATTGTGTTGTT+GGG | - | chr3_3:1941605-1941624 | Msa0437940:intron | 30.0% |
| ! | TTTTATGTCCTGACTTTGTT+TGG | - | chr3_3:1941766-1941785 | Msa0437940:intron | 30.0% |
| ! | TCATGCTAGTTCCATATTTT+TGG | - | chr3_3:1941808-1941827 | Msa0437940:intron | 30.0% |
| !! | TACTCAAGTTGAACTCTAAA+AGG | - | chr3_3:1941845-1941864 | Msa0437940:intron | 30.0% |
| TTCAATTTCAAATGACCAGT+TGG | - | chr3_3:1941933-1941952 | Msa0437940:intron | 30.0% | |
| ATATAATGAAAGGCAAGAGA+GGG | + | chr3_3:1942155-1942174 | None:intergenic | 30.0% | |
| ! | GGAATTTGACTTATATGTAG+TGG | + | chr3_3:1942226-1942245 | None:intergenic | 30.0% |
| GAAAAGACAAATATGAGAAG+AGG | + | chr3_3:1942871-1942890 | None:intergenic | 30.0% | |
| TTCTCAGTTAAATTAACCAG+TGG | - | chr3_3:1942898-1942917 | Msa0437940:intron | 30.0% | |
| CACAAAATTTAATGTAGTGC+TGG | + | chr3_3:1942976-1942995 | None:intergenic | 30.0% | |
| TTTGGTTGAGCTTCTATAAT+CGG | + | chr3_3:1943140-1943159 | None:intergenic | 30.0% | |
| CCATTATTATTGAGCTATAC+TGG | + | chr3_3:1943166-1943185 | None:intergenic | 30.0% | |
| CCAGTATAGCTCAATAATAA+TGG | - | chr3_3:1943163-1943182 | Msa0437940:intron | 30.0% | |
| ! | AGCTTTTCTAACTGTTTTCA+TGG | - | chr3_3:1943560-1943579 | Msa0437940:intron | 30.0% |
| ! | AATCACTTGTTTGAAGGTTT+TGG | + | chr3_3:1943695-1943714 | None:intergenic | 30.0% |
| AACCTTCAAACAAGTGATTT+CGG | - | chr3_3:1943696-1943715 | Msa0437940:intron | 30.0% | |
| ATTAGATCCCTATGAGATAT+AGG | + | chr3_3:1944138-1944157 | None:intergenic | 30.0% | |
| CATATCTGACATTGAACAAA+GGG | + | chr3_3:1944507-1944526 | None:intergenic | 30.0% | |
| ACAACTCTTTCAACAATGTT+TGG | - | chr3_3:1944775-1944794 | Msa0437940:intron | 30.0% | |
| GATCAAGTTCATATTGGAAA+TGG | - | chr3_3:1944880-1944899 | Msa0437940:intron | 30.0% | |
| ! | TTTAAAGTAGTAGGGTGTAA+AGG | + | chr3_3:1944952-1944971 | None:intergenic | 30.0% |
| ! | ACTGACACTAACAAGATTTT+TGG | + | chr3_3:1945007-1945026 | None:intergenic | 30.0% |
| ! | AGACTATGATTGACTTCTAA+AGG | + | chr3_3:1945249-1945268 | None:intergenic | 30.0% |
| AATGCTATACAAAGAAGGAA+AGG | + | chr3_3:1945343-1945362 | None:intergenic | 30.0% | |
| TTCCTTCTTTGTATAGCATT+TGG | - | chr3_3:1945343-1945362 | Msa0437940:intron | 30.0% | |
| !! | GTCATTTTAGATGCATAAGA+AGG | + | chr3_3:1945498-1945517 | None:intergenic | 30.0% |
| TCACAGAAAATTAACTCAAG+TGG | + | chr3_3:1945531-1945550 | None:intergenic | 30.0% | |
| ! | AGTTAATTTTCTGTGACTTG+TGG | - | chr3_3:1945535-1945554 | Msa0437940:intron | 30.0% |
| !! | GTTAATTTTCTGTGACTTGT+GGG | - | chr3_3:1945536-1945555 | Msa0437940:intron | 30.0% |
| !! | TTAATTTTCTGTGACTTGTG+GGG | - | chr3_3:1945537-1945556 | Msa0437940:intron | 30.0% |
| !! | TCTTAAAGTTCTGAAATGTG+TGG | + | chr3_3:1945671-1945690 | None:intergenic | 30.0% |
| ATCATATCTGTTCAAACTGA+TGG | - | chr3_3:1945720-1945739 | Msa0437940:intron | 30.0% | |
| ! | TCATTGAGATATTTGGTGAA+GGG | + | chr3_3:1945762-1945781 | None:intergenic | 30.0% |
| ! | ATCATTGAGATATTTGGTGA+AGG | + | chr3_3:1945763-1945782 | None:intergenic | 30.0% |
| ACCAAATATCTCAATGATCT+TGG | - | chr3_3:1945765-1945784 | Msa0437940:intron | 30.0% | |
| TCCAAGATCATTGAGATATT+TGG | + | chr3_3:1945769-1945788 | None:intergenic | 30.0% | |
| TGGAAAGTGAGTAAAAAGAA+AGG | + | chr3_3:1945985-1946004 | None:intergenic | 30.0% | |
| GAGTTATAGGGTCTTAAAAA+TGG | + | chr3_3:1946054-1946073 | None:intergenic | 30.0% | |
| TCAAGTTTGTGAGAGTTATA+GGG | + | chr3_3:1946066-1946085 | None:intergenic | 30.0% | |
| ATCAAGTTTGTGAGAGTTAT+AGG | + | chr3_3:1946067-1946086 | None:intergenic | 30.0% | |
| ! | CAAACTTGATTTTCATTCCA+AGG | - | chr3_3:1946077-1946096 | Msa0437940:intron | 30.0% |
| GAAGGAGATAAAACAGTAAT+GGG | + | chr3_3:1946489-1946508 | None:intergenic | 30.0% | |
| AGAAGGAGATAAAACAGTAA+TGG | + | chr3_3:1946490-1946509 | None:intergenic | 30.0% | |
| TTGTTAGGATGAATTCTATG+AGG | + | chr3_3:1946594-1946613 | None:intergenic | 30.0% | |
| TATGTAGGGTAAACAATGAA+GGG | + | chr3_3:1947223-1947242 | None:intergenic | 30.0% | |
| TGGATGATATTATCATCACA+GGG | - | chr3_3:1947276-1947295 | Msa0437940:intron | 30.0% | |
| ! | TAACTCAGAATTTTCTCTCA+AGG | - | chr3_3:1947337-1947356 | Msa0437940:intron | 30.0% |
| ! | AGAATTTTCTCTCAAGGATT+TGG | - | chr3_3:1947343-1947362 | Msa0437940:intron | 30.0% |
| ! | GAATTTTCTCTCAAGGATTT+GGG | - | chr3_3:1947344-1947363 | Msa0437940:intron | 30.0% |
| GTCCCAATCTAAATACATTA+AGG | - | chr3_3:1947427-1947446 | Msa0437940:intron | 30.0% | |
| ACTGTTTGCATTTATCATGT+TGG | + | chr3_3:1947465-1947484 | None:intergenic | 30.0% | |
| CATGATAAATGCAAACAGTA+TGG | - | chr3_3:1947466-1947485 | Msa0437940:intron | 30.0% | |
| TCATTCAAGAACAAAACACA+TGG | - | chr3_3:1948037-1948056 | Msa0437940:intron | 30.0% | |
| CAGAGAAAAGGTTATCAAAA+AGG | - | chr3_3:1948079-1948098 | Msa0437940:intron | 30.0% | |
| AAAGGTTATCAAAAAGGAGT+TGG | - | chr3_3:1948085-1948104 | Msa0437940:intron | 30.0% | |
| ! | AGCTTTTCTAACTGTTTTCA+TGG | - | chr3_3:1943560-1943579 | Msa0437940:intron | 30.0% |
| !!! | TTCGTGCATTTTTTTGTTTC+AGG | - | chr3_3:1948684-1948703 | Msa0437940:intron | 30.0% |
| ! | TTTCAGGTGCTTATAAGATA+TGG | - | chr3_3:1948700-1948719 | Msa0437940:intron | 30.0% |
| TCCATACAACATTTATGATC+AGG | - | chr3_3:1948768-1948787 | Msa0437940:intron | 30.0% | |
| ACCTGATCATAAATGTTGTA+TGG | + | chr3_3:1948772-1948791 | None:intergenic | 30.0% | |
| ! | TTTCAAGTATCATACAATGC+GGG | - | chr3_3:1948808-1948827 | Msa0437940:intron | 30.0% |
| !!! | TGATGTGTTTTTTTCTCCTT+TGG | - | chr3_3:1948832-1948851 | Msa0437940:intron | 30.0% |
| ! | TAATATTGGTTGAAAGGGAA+GGG | + | chr3_3:1949282-1949301 | None:intergenic | 30.0% |
| ! | TTAATATTGGTTGAAAGGGA+AGG | + | chr3_3:1949283-1949302 | None:intergenic | 30.0% |
| ! | GTGCTTAATATTGGTTGAAA+GGG | + | chr3_3:1949287-1949306 | None:intergenic | 30.0% |
| ! | TGTGCTTAATATTGGTTGAA+AGG | + | chr3_3:1949288-1949307 | None:intergenic | 30.0% |
| !!! | AGTTTGACAATTTTTTTGGG+TGG | + | chr3_3:1949845-1949864 | None:intergenic | 30.0% |
| CTTTGTTCATATCCTGTAAA+GGG | + | chr3_3:1949983-1950002 | None:intergenic | 30.0% | |
| TCTTTGTTCATATCCTGTAA+AGG | + | chr3_3:1949984-1950003 | None:intergenic | 30.0% | |
| GCTATTATGGTAAACTTTCA+AGG | - | chr3_3:1950065-1950084 | Msa0437940:CDS | 30.0% | |
| ACTGGTTAAATATCCAAACA+AGG | - | chr3_3:1950119-1950138 | Msa0437940:CDS | 30.0% | |
| TAAGTGTGTATGTATTTGGT+TGG | - | chr3_3:1950150-1950169 | Msa0437940:intron | 30.0% | |
| TCTCTGATTGTGATATCAAA+TGG | + | chr3_3:1950653-1950672 | None:intergenic | 30.0% | |
| CAATCAGAGAGATATATATC+TGG | - | chr3_3:1950663-1950682 | Msa0437940:CDS | 30.0% | |
| TTACATATTAGTGTACGTAC+TGG | - | chr3_3:1950688-1950707 | Msa0437940:CDS | 30.0% | |
| AACGGAGTGAGATTGAAATT+GGG | + | chr3_3:1938697-1938716 | None:intergenic | 35.0% | |
| TGGCAAAAAATTGTGGAGAA+CGG | + | chr3_3:1938715-1938734 | None:intergenic | 35.0% | |
| !!! | TTCTCCACAATTTTTTGCCA+TGG | - | chr3_3:1938715-1938734 | Msa0437940:three_prime_UTR | 35.0% |
| GGAGTTTCCATATGAAGAAT+TGG | + | chr3_3:1938787-1938806 | None:intergenic | 35.0% | |
| ! | GATTTTGCAGCAATTAACTC+CGG | - | chr3_3:1938939-1938958 | Msa0437940:CDS | 35.0% |
| CCAACATGTTCACTGATAAA+AGG | + | chr3_3:1938988-1939007 | None:intergenic | 35.0% | |
| ! | CCTTTTATCAGTGAACATGT+TGG | - | chr3_3:1938985-1939004 | Msa0437940:intron | 35.0% |
| TGTGATACAATACAAGTACC+TGG | + | chr3_3:1939059-1939078 | None:intergenic | 35.0% | |
| !!! | ATTTTGGAATGAAAGCGAGT+TGG | - | chr3_3:1939354-1939373 | Msa0437940:intron | 35.0% |
| CCTGATAAACTGAACTTTGA+CGG | + | chr3_3:1939387-1939406 | None:intergenic | 35.0% | |
| ! | TAAGTATGCAAAGTACTCAC+GGG | + | chr3_3:1939460-1939479 | None:intergenic | 35.0% |
| ! | GTAAGTATGCAAAGTACTCA+CGG | + | chr3_3:1939461-1939480 | None:intergenic | 35.0% |
| AACTCATGCATTCAATAGAC+AGG | + | chr3_3:1939483-1939502 | None:intergenic | 35.0% | |
| TGCATTTGTAGTTATGCAGT+TGG | - | chr3_3:1939567-1939586 | Msa0437940:CDS | 35.0% | |
| GAGTAATGCATTACCTATCT+TGG | - | chr3_3:1939593-1939612 | Msa0437940:intron | 35.0% | |
| TTTATCAAGCATACTGGAGA+AGG | + | chr3_3:1940423-1940442 | None:intergenic | 35.0% | |
| TACAATGGCAACAAATTCCA+AGG | + | chr3_3:1940596-1940615 | None:intergenic | 35.0% | |
| CTCAATAGTTTCCTAGTTTC+TGG | - | chr3_3:1940738-1940757 | Msa0437940:intron | 35.0% | |
| ATGAAAAGTTTGCACATCTC+TGG | - | chr3_3:1941211-1941230 | Msa0437940:intron | 35.0% | |
| TACCAGAAAAATCATGTCTG+CGG | + | chr3_3:1941323-1941342 | None:intergenic | 35.0% | |
| !! | TCAAGATATTTGGCTCTGTT+TGG | + | chr3_3:1941456-1941475 | None:intergenic | 35.0% |
| GGTAAAGCTAGGATTCAAAT+TGG | - | chr3_3:1941626-1941645 | Msa0437940:intron | 35.0% | |
| ! | TTCCTTTAATAGAGGCACAA+AGG | - | chr3_3:1941707-1941726 | Msa0437940:intron | 35.0% |
| ! | TCCTTTAATAGAGGCACAAA+GGG | - | chr3_3:1941708-1941727 | Msa0437940:intron | 35.0% |
| AGATCAAAAGACTGTCAACT+AGG | + | chr3_3:1941747-1941766 | None:intergenic | 35.0% | |
| AATATGGAACTAGCATGATC+AGG | + | chr3_3:1941806-1941825 | None:intergenic | 35.0% | |
| GCAGATTTCTTGAATCATGA+CGG | - | chr3_3:1942077-1942096 | Msa0437940:intron | 35.0% | |
| CAGATTTCTTGAATCATGAC+GGG | - | chr3_3:1942078-1942097 | Msa0437940:intron | 35.0% | |
| GATATAATGAAAGGCAAGAG+AGG | + | chr3_3:1942156-1942175 | None:intergenic | 35.0% | |
| TAAGTCAAATTCCATCGGTA+TGG | - | chr3_3:1942233-1942252 | Msa0437940:intron | 35.0% | |
| AGTACAAATGCAACGAGAAT+AGG | + | chr3_3:1942752-1942771 | None:intergenic | 35.0% | |
| ATTGAGCTATACTGGTAGTT+TGG | + | chr3_3:1943158-1943177 | None:intergenic | 35.0% | |
| ! | ATGTCCTTTTCACTTAGAAC+TGG | - | chr3_3:1943189-1943208 | Msa0437940:intron | 35.0% |
| !! | GTTTCCAGTTCTAAGTGAAA+AGG | + | chr3_3:1943196-1943215 | None:intergenic | 35.0% |
| ATGGAGTTCAACTTCAAACA+TGG | - | chr3_3:1943579-1943598 | Msa0437940:intron | 35.0% | |
| TTGGAGATCCTATATCTCAT+AGG | - | chr3_3:1944127-1944146 | Msa0437940:intron | 35.0% | |
| TGGAGATCCTATATCTCATA+GGG | - | chr3_3:1944128-1944147 | Msa0437940:intron | 35.0% | |
| ! | ACAATAGCGTTGAATTCTTC+AGG | + | chr3_3:1944183-1944202 | None:intergenic | 35.0% |
| TCAGTAAGATTAACAGACAC+AGG | + | chr3_3:1944309-1944328 | None:intergenic | 35.0% | |
| AAACCTTGAGAATTAGGTTC+AGG | + | chr3_3:1944342-1944361 | None:intergenic | 35.0% | |
| GAACTGAAACCTTGAGAATT+AGG | + | chr3_3:1944348-1944367 | None:intergenic | 35.0% | |
| CCAAAATTAGGGTTAGGATT+GGG | + | chr3_3:1944396-1944415 | None:intergenic | 35.0% | |
| ! | CCAATCCTAACCCTAATTTT+GGG | - | chr3_3:1944394-1944413 | Msa0437940:intron | 35.0% |
| ! | CAATCCTAACCCTAATTTTG+GGG | - | chr3_3:1944395-1944414 | Msa0437940:intron | 35.0% |
| ! | AATCCTAACCCTAATTTTGG+GGG | - | chr3_3:1944396-1944415 | Msa0437940:intron | 35.0% |
| GCATATCTGACATTGAACAA+AGG | + | chr3_3:1944508-1944527 | None:intergenic | 35.0% | |
| ! | TATGGTGGAAATTCAACCTA+TGG | - | chr3_3:1944624-1944643 | Msa0437940:intron | 35.0% |
| ! | ATGGTGGAAATTCAACCTAT+GGG | - | chr3_3:1944625-1944644 | Msa0437940:intron | 35.0% |
| AATGTTTGGTATCCAGATTC+AGG | - | chr3_3:1944789-1944808 | Msa0437940:intron | 35.0% | |
| CATAGAATCCATTAGGTTAG+AGG | + | chr3_3:1944845-1944864 | None:intergenic | 35.0% | |
| ! | GGTTCTGATCAAGTTCATAT+TGG | - | chr3_3:1944874-1944893 | Msa0437940:intron | 35.0% |
| GTTCATATTGGAAATGGACA+AGG | - | chr3_3:1944886-1944905 | Msa0437940:intron | 35.0% | |
| AAACTGTAATGAACCAACAG+AGG | + | chr3_3:1944923-1944942 | None:intergenic | 35.0% | |
| AAAATCTCAGGACTCTTCTA+AGG | - | chr3_3:1945083-1945102 | Msa0437940:intron | 35.0% | |
| !! | GAAACTTTATTGCTGACTCT+AGG | + | chr3_3:1945198-1945217 | None:intergenic | 35.0% |
| TGCCAAATGCTATACAAAGA+AGG | + | chr3_3:1945348-1945367 | None:intergenic | 35.0% | |
| TGTATAGCATTTGGCATAGT+AGG | - | chr3_3:1945352-1945371 | Msa0437940:intron | 35.0% | |
| ! | TTTGAAGCACCTCATGATTA+GGG | + | chr3_3:1945386-1945405 | None:intergenic | 35.0% |
| ! | TATCCAAGTGTATCTAGAGT+AGG | + | chr3_3:1945619-1945638 | None:intergenic | 35.0% |
| ! | GTGTGGGATTTAAGTTTCAA+GGG | + | chr3_3:1945645-1945664 | None:intergenic | 35.0% |
| ! | TGTGTGGGATTTAAGTTTCA+AGG | + | chr3_3:1945646-1945665 | None:intergenic | 35.0% |
| ATATCTGTTCAAACTGATGG+AGG | - | chr3_3:1945723-1945742 | Msa0437940:intron | 35.0% | |
| CTCATACTCATCACCAAAAT+GGG | - | chr3_3:1945809-1945828 | Msa0437940:intron | 35.0% | |
| CATTTGAGCATGGGATAAAA+GGG | + | chr3_3:1945878-1945897 | None:intergenic | 35.0% | |
| CAGTCTATTAATGAGGTAAG+TGG | + | chr3_3:1945935-1945954 | None:intergenic | 35.0% | |
| TTGTTAGCTAAAACTGGTGT+AGG | + | chr3_3:1945958-1945977 | None:intergenic | 35.0% | |
| TTTGTAACCTTTGTGATGAC+TGG | + | chr3_3:1946124-1946143 | None:intergenic | 35.0% | |
| TACAAATGTCTAGATGCTTC+TGG | - | chr3_3:1946138-1946157 | Msa0437940:intron | 35.0% | |
| CTCATTAAACACCACATCTT+TGG | + | chr3_3:1946178-1946197 | None:intergenic | 35.0% | |
| CAAAGATGTGGTGTTTAATG+AGG | - | chr3_3:1946176-1946195 | Msa0437940:intron | 35.0% | |
| ACATGGTAATCTGATTGAGA+AGG | + | chr3_3:1946228-1946247 | None:intergenic | 35.0% | |
| GATTACCATGTTAAACCAGA+TGG | - | chr3_3:1946237-1946256 | Msa0437940:intron | 35.0% | |
| TTTGAACTGACAGTTGAGAT+AGG | + | chr3_3:1946303-1946322 | None:intergenic | 35.0% | |
| TCTCATTCTTCTTCATCTGT+TGG | - | chr3_3:1946324-1946343 | Msa0437940:intron | 35.0% | |
| GTTCAGATTCAATAGATGGA+GGG | + | chr3_3:1946371-1946390 | None:intergenic | 35.0% | |
| ! | TGACAGGAGTATGAGTAATA+GGG | + | chr3_3:1946401-1946420 | None:intergenic | 35.0% |
| ! | TTGACAGGAGTATGAGTAAT+AGG | + | chr3_3:1946402-1946421 | None:intergenic | 35.0% |
| TGAATTCTATGAGGAACAAG+AGG | + | chr3_3:1946585-1946604 | None:intergenic | 35.0% | |
| ! | CTCATAGAATGAGTGTTGTT+AGG | + | chr3_3:1946609-1946628 | None:intergenic | 35.0% |
| ACTCATTCTATGAGAACAAG+AGG | - | chr3_3:1946615-1946634 | Msa0437940:intron | 35.0% | |
| !! | AGAGCAGTTTTGTATGATGT+AGG | + | chr3_3:1946699-1946718 | None:intergenic | 35.0% |
| CCATGTTTGGTTATTCATCA+GGG | + | chr3_3:1946766-1946785 | None:intergenic | 35.0% | |
| TCCATGTTTGGTTATTCATC+AGG | + | chr3_3:1946767-1946786 | None:intergenic | 35.0% | |
| TGGTACTGTTAACAGGTATA+AGG | - | chr3_3:1946860-1946879 | Msa0437940:intron | 35.0% | |
| CATTGTTTACATCAAGCTGT+TGG | + | chr3_3:1947013-1947032 | None:intergenic | 35.0% | |
| GTAAACAATGCCTTTCTCAA+TGG | - | chr3_3:1947023-1947042 | Msa0437940:intron | 35.0% | |
| ! | AAGCTAAATAAGGCACTCTA+TGG | - | chr3_3:1947116-1947135 | Msa0437940:intron | 35.0% |
| AAAGCAACTCTTCTTACCTT+TGG | - | chr3_3:1947176-1947195 | Msa0437940:CDS | 35.0% | |
| TCTGCTTGACTTAAAACCAA+AGG | + | chr3_3:1947195-1947214 | None:intergenic | 35.0% | |
| GTATGTAGGGTAAACAATGA+AGG | + | chr3_3:1947224-1947243 | None:intergenic | 35.0% | |
| GTGGATGATATTATCATCAC+AGG | - | chr3_3:1947275-1947294 | Msa0437940:intron | 35.0% | |
| ! | GGACTATTTTCTTTGCATAG+AGG | - | chr3_3:1947373-1947392 | Msa0437940:intron | 35.0% |
| ! | TCAATTTTTATCTGCACCTC+AGG | - | chr3_3:1947631-1947650 | Msa0437940:intron | 35.0% |
| CTTAAGTAAAGACTGTATCC+AGG | + | chr3_3:1947939-1947958 | None:intergenic | 35.0% | |
| CTGGATACAGTCTTTACTTA+AGG | - | chr3_3:1947937-1947956 | Msa0437940:intron | 35.0% | |
| CAGATTGTCACAAGATTTGA+GGG | + | chr3_3:1947985-1948004 | None:intergenic | 35.0% | |
| TCAGATTGTCACAAGATTTG+AGG | + | chr3_3:1947986-1948005 | None:intergenic | 35.0% | |
| TTTGTTCTTGAATGAAGCAC+AGG | + | chr3_3:1948032-1948051 | None:intergenic | 35.0% | |
| !! | GTCTCTAAGATAGATGAATC+TGG | + | chr3_3:1948174-1948193 | None:intergenic | 35.0% |
| TCTATCTTAGAGACAAACTG+AGG | - | chr3_3:1948180-1948199 | Msa0437940:intron | 35.0% | |
| CTATCTTAGAGACAAACTGA+GGG | - | chr3_3:1948181-1948200 | Msa0437940:intron | 35.0% | |
| ACATTTCCCCTTTAAACTGA+GGG | + | chr3_3:1948216-1948235 | None:intergenic | 35.0% | |
| AACATTTCCCCTTTAAACTG+AGG | + | chr3_3:1948217-1948236 | None:intergenic | 35.0% | |
| ! | AATATAGTAACAGGAAGCAC+AGG | + | chr3_3:1948585-1948604 | None:intergenic | 35.0% |
| AATGCACGAAATTGTCAACT+AGG | + | chr3_3:1948674-1948693 | None:intergenic | 35.0% | |
| TTCAAATGCTACATTGATGC+TGG | - | chr3_3:1948729-1948748 | Msa0437940:intron | 35.0% | |
| GATCAGGTATTCCTTTCAAT+TGG | - | chr3_3:1948784-1948803 | Msa0437940:intron | 35.0% | |
| !!! | TTTTTTTCTCCTTTGGCTTG+TGG | - | chr3_3:1948839-1948858 | Msa0437940:intron | 35.0% |
| CATACTTAGGTATATCGTAC+TGG | + | chr3_3:1948947-1948966 | None:intergenic | 35.0% | |
| AAGTGCAAACTTGATTGTGA+AGG | + | chr3_3:1949060-1949079 | None:intergenic | 35.0% | |
| !!! | TTTTTACTGATTCTTGGCAG+TGG | - | chr3_3:1949133-1949152 | Msa0437940:intron | 35.0% |
| !!! | TTTTACTGATTCTTGGCAGT+GGG | - | chr3_3:1949134-1949153 | Msa0437940:intron | 35.0% |
| AAACTGTCCTTAATGCTCAT+GGG | - | chr3_3:1949200-1949219 | Msa0437940:intron | 35.0% | |
| TGATAAAGGGAACAGATCAA+AGG | + | chr3_3:1949358-1949377 | None:intergenic | 35.0% | |
| CTTACATACTTGCCAGTATT+TGG | - | chr3_3:1949639-1949658 | Msa0437940:intron | 35.0% | |
| CATTATGCTCCGCAATTAAT+TGG | + | chr3_3:1950043-1950062 | None:intergenic | 35.0% | |
| GGTTAAATATCCAAACAAGG+TGG | - | chr3_3:1950122-1950141 | Msa0437940:CDS | 35.0% | |
| ! | AGATCTTTTTGTTCCAACAG+TGG | - | chr3_3:1950256-1950275 | Msa0437940:CDS | 35.0% |
| !! | ACTGTTTTTCCTTGACTTGA+TGG | - | chr3_3:1950437-1950456 | Msa0437940:CDS | 35.0% |
| ATTTACTGACCATCAAGTCA+AGG | + | chr3_3:1950449-1950468 | None:intergenic | 35.0% | |
| ! | TTGACTTGATGGTCAGTAAA+TGG | - | chr3_3:1950448-1950467 | Msa0437940:CDS | 35.0% |
| TAGGCCAGAATTAACACAAA+TGG | - | chr3_3:1950496-1950515 | Msa0437940:CDS | 35.0% | |
| CCTTCCATTTGTGTTAATTC+TGG | + | chr3_3:1950503-1950522 | None:intergenic | 35.0% | |
| CCAGAATTAACACAAATGGA+AGG | - | chr3_3:1950500-1950519 | Msa0437940:CDS | 35.0% | |
| CTGATTGTGATATCAAATGG+AGG | + | chr3_3:1950650-1950669 | None:intergenic | 35.0% | |
| AGTTGTGTATGTGTCTGTCT+CGG | + | chr3_3:1938563-1938582 | None:intergenic | 40.0% | |
| TGAGATTGAAATTGGGGAGA+AGG | + | chr3_3:1938690-1938709 | None:intergenic | 40.0% | |
| ACGGAGTGAGATTGAAATTG+GGG | + | chr3_3:1938696-1938715 | None:intergenic | 40.0% | |
| GAACGGAGTGAGATTGAAAT+TGG | + | chr3_3:1938698-1938717 | None:intergenic | 40.0% | |
| CCAACCATGGCAAAAAATTG+TGG | + | chr3_3:1938722-1938741 | None:intergenic | 40.0% | |
| !!! | CCACAATTTTTTGCCATGGT+TGG | - | chr3_3:1938719-1938738 | Msa0437940:three_prime_UTR | 40.0% |
| GGAAATGGAAGAAGAAATGG+TGG | + | chr3_3:1938760-1938779 | None:intergenic | 40.0% | |
| ATTTCAGGAGGGAGATTATC+CGG | + | chr3_3:1938961-1938980 | None:intergenic | 40.0% | |
| ACAACATGCCATTGTATGAC+AGG | - | chr3_3:1939129-1939148 | Msa0437940:intron | 40.0% | |
| TTCAGAGTCCTGTCATACAA+TGG | + | chr3_3:1939140-1939159 | None:intergenic | 40.0% | |
| TTGTATGACAGGACTCTGAA+TGG | - | chr3_3:1939140-1939159 | Msa0437940:intron | 40.0% | |
| ACTTGCCGTATTATGCATCT+CGG | + | chr3_3:1939197-1939216 | None:intergenic | 40.0% | |
| CCGTCAAAGTTCAGTTTATC+AGG | - | chr3_3:1939384-1939403 | Msa0437940:intron | 40.0% | |
| GCTAAAAAAATGCCTAGCCT+AGG | + | chr3_3:1939865-1939884 | None:intergenic | 40.0% | |
| ! | ATTGTTTTCCTCGAGCTGTT+AGG | + | chr3_3:1939930-1939949 | None:intergenic | 40.0% |
| TTTGGACTTGATTCACGACT+GGG | - | chr3_3:1940149-1940168 | Msa0437940:intron | 40.0% | |
| ! | TTTTTCACACTAGCTGAGCT+TGG | + | chr3_3:1940203-1940222 | None:intergenic | 40.0% |
| TCAGCTAGTGTGAAAAAGCT+TGG | - | chr3_3:1940206-1940225 | Msa0437940:intron | 40.0% | |
| AAATTCCAAGGCAGTGTTTG+AGG | + | chr3_3:1940584-1940603 | None:intergenic | 40.0% | |
| ! | CAAATGGATACTTGGTCTTC+TGG | + | chr3_3:1940949-1940968 | None:intergenic | 40.0% |
| ! | TACCGCAGACATGATTTTTC+TGG | - | chr3_3:1941318-1941337 | Msa0437940:intron | 40.0% |
| !! | ATTTGGCTCTGTTTGGCTTT+GGG | + | chr3_3:1941449-1941468 | None:intergenic | 40.0% |
| !! | TATTTGGCTCTGTTTGGCTT+TGG | + | chr3_3:1941450-1941469 | None:intergenic | 40.0% |
| ! | CAGGAGTTTTACTTGAGCAT+TGG | - | chr3_3:1941533-1941552 | Msa0437940:intron | 40.0% |
| ! | TTGTGTTGTTGGGTAAAGCT+AGG | - | chr3_3:1941615-1941634 | Msa0437940:intron | 40.0% |
| ACCCTTTGTGCCTCTATTAA+AGG | + | chr3_3:1941712-1941731 | None:intergenic | 40.0% | |
| GACTGTCAACTAGGAAAACT+AGG | + | chr3_3:1941738-1941757 | None:intergenic | 40.0% | |
| ! | TATGTCCTGACTTTGTTTGG+TGG | - | chr3_3:1941769-1941788 | Msa0437940:intron | 40.0% |
| AAGCACAAAGGGTTTATCTC+TGG | - | chr3_3:1941971-1941990 | Msa0437940:intron | 40.0% | |
| TCTCTGGTATTGCTACTGAA+TGG | - | chr3_3:1941987-1942006 | Msa0437940:intron | 40.0% | |
| ACGGTGAAATATTAACGTCC+AGG | + | chr3_3:1942260-1942279 | None:intergenic | 40.0% | |
| TGTAGGAGAAAACGAGAGAT+GGG | - | chr3_3:1942342-1942361 | Msa0437940:intron | 40.0% | |
| GAGTCTATTCTAGCGATCTT+AGG | + | chr3_3:1942513-1942532 | None:intergenic | 40.0% | |
| TCTGATCGTGATTATGTTCC+TGG | - | chr3_3:1942676-1942695 | Msa0437940:intron | 40.0% | |
| TGATTATGTTCCTGGTGAAC+AGG | - | chr3_3:1942684-1942703 | Msa0437940:intron | 40.0% | |
| TAGTATTTGACCTGTTCACC+AGG | + | chr3_3:1942697-1942716 | None:intergenic | 40.0% | |
| AGAGGCTGTCCAAATCTTAA+TGG | + | chr3_3:1942853-1942872 | None:intergenic | 40.0% | |
| !! | GTTTTTCAGAAGCAATCCAC+TGG | + | chr3_3:1942917-1942936 | None:intergenic | 40.0% |
| GAATCGTTGACAGTTTAGCT+TGG | + | chr3_3:1943066-1943085 | None:intergenic | 40.0% | |
| TAAATTCCATTATGTGGCCC+TGG | - | chr3_3:1943230-1943249 | Msa0437940:intron | 40.0% | |
| TAAAAACCAGGGCCACATAA+TGG | + | chr3_3:1943239-1943258 | None:intergenic | 40.0% | |
| AAGCTCAGTAAGAAGCTTGT+GGG | + | chr3_3:1943266-1943285 | None:intergenic | 40.0% | |
| ! | ATCCTAGACTCAAAGTGCTT+CGG | - | chr3_3:1943326-1943345 | Msa0437940:intron | 40.0% |
| !! | AGAAGAGGAATCGTTTTGAG+AGG | + | chr3_3:1943635-1943654 | None:intergenic | 40.0% |
| CACCGAAATCACTTGTTTGA+AGG | + | chr3_3:1943701-1943720 | None:intergenic | 40.0% | |
| TTATCTTCAATGGAAGCAGC+AGG | - | chr3_3:1943738-1943757 | Msa0437940:intron | 40.0% | |
| TGTGCTTCGTGGAACAAAAA+TGG | - | chr3_3:1943768-1943787 | Msa0437940:intron | 40.0% | |
| TTCGTTTCTCGCATCAAGTT+TGG | - | chr3_3:1943959-1943978 | Msa0437940:intron | 40.0% | |
| TCGTTTCTCGCATCAAGTTT+GGG | - | chr3_3:1943960-1943979 | Msa0437940:intron | 40.0% | |
| TCTGAGTGTAGCAATAGGTA+TGG | + | chr3_3:1943993-1944012 | None:intergenic | 40.0% | |
| CTTCATCTGAGTGTAGCAAT+AGG | + | chr3_3:1943998-1944017 | None:intergenic | 40.0% | |
| ACGAGCAATAAACTCAGCAA+CGG | + | chr3_3:1944076-1944095 | None:intergenic | 40.0% | |
| TGAAGCAAGAGACTCTGATA+TGG | + | chr3_3:1944106-1944125 | None:intergenic | 40.0% | |
| TCAGAGTCTCTTGCTTCAAT+TGG | - | chr3_3:1944108-1944127 | Msa0437940:intron | 40.0% | |
| ! | CCCAATCCTAACCCTAATTT+TGG | - | chr3_3:1944393-1944412 | Msa0437940:intron | 40.0% |
| CCCAAAATTAGGGTTAGGAT+TGG | + | chr3_3:1944397-1944416 | None:intergenic | 40.0% | |
| ! | ATCCTAACCCTAATTTTGGG+GGG | - | chr3_3:1944397-1944416 | Msa0437940:intron | 40.0% |
| CACCAGAATTTCCAGCAAAA+CGG | + | chr3_3:1944479-1944498 | None:intergenic | 40.0% | |
| TGTCAGATATGCTTCAAGAC+TGG | - | chr3_3:1944516-1944535 | Msa0437940:intron | 40.0% | |
| TGGTGGAAATTCAACCTATG+GGG | - | chr3_3:1944626-1944645 | Msa0437940:intron | 40.0% | |
| AGAGGGACATAGAATCCATT+AGG | + | chr3_3:1944852-1944871 | None:intergenic | 40.0% | |
| AACTTGATCAGAACCTGAGA+GGG | + | chr3_3:1944869-1944888 | None:intergenic | 40.0% | |
| TATTGGAAATGGACAAGGTC+TGG | - | chr3_3:1944891-1944910 | Msa0437940:intron | 40.0% | |
| TAATGAACCAACAGAGGTGA+TGG | + | chr3_3:1944917-1944936 | None:intergenic | 40.0% | |
| !! | TATTGCTGACTCTAGGAGTA+TGG | + | chr3_3:1945191-1945210 | None:intergenic | 40.0% |
| !! | CTTTGAAGCACCTCATGATT+AGG | + | chr3_3:1945387-1945406 | None:intergenic | 40.0% |
| !!! | TTTTGCAATGCTTGCTGTCT+TGG | - | chr3_3:1945456-1945475 | Msa0437940:intron | 40.0% |
| TATCCACATGATGACTCAAC+AGG | + | chr3_3:1945570-1945589 | None:intergenic | 40.0% | |
| AGTAGGCATCTACACAAGTA+AGG | + | chr3_3:1945602-1945621 | None:intergenic | 40.0% | |
| ATGCCTACTCTAGATACACT+TGG | - | chr3_3:1945613-1945632 | Msa0437940:intron | 40.0% | |
| !!! | CCATTTTGGTGATGAGTATG+AGG | + | chr3_3:1945811-1945830 | None:intergenic | 40.0% |
| CCTCATACTCATCACCAAAA+TGG | - | chr3_3:1945808-1945827 | Msa0437940:intron | 40.0% | |
| ACCAAAATGGGTCTGTTGAA+AGG | - | chr3_3:1945821-1945840 | Msa0437940:intron | 40.0% | |
| ! | TCCTTTCAACAGACCCATTT+TGG | + | chr3_3:1945825-1945844 | None:intergenic | 40.0% |
| GGTCTGTTGAAAGGAAACAT+AGG | - | chr3_3:1945830-1945849 | Msa0437940:intron | 40.0% | |
| GCATTTGAGCATGGGATAAA+AGG | + | chr3_3:1945879-1945898 | None:intergenic | 40.0% | |
| GTGTAGGCAGTCTATTAATG+AGG | + | chr3_3:1945942-1945961 | None:intergenic | 40.0% | |
| !! | GGTGACTTGTTAGCTAAAAC+TGG | + | chr3_3:1945964-1945983 | None:intergenic | 40.0% |
| ! | TTGGACCATCTGGTTTAACA+TGG | + | chr3_3:1946245-1946264 | None:intergenic | 40.0% |
| CGTAAGAAGGTAGACAAAGT+TGG | + | chr3_3:1946264-1946283 | None:intergenic | 40.0% | |
| !! | GTTGAGATAGGTATTGAGAC+AGG | + | chr3_3:1946291-1946310 | None:intergenic | 40.0% |
| GGTTCAGATTCAATAGATGG+AGG | + | chr3_3:1946372-1946391 | None:intergenic | 40.0% | |
| GCAGGTTCAGATTCAATAGA+TGG | + | chr3_3:1946375-1946394 | None:intergenic | 40.0% | |
| ! | GACAGGAGTATGAGTAATAG+GGG | + | chr3_3:1946400-1946419 | None:intergenic | 40.0% |
| ATTTAGCACACTCATAGGTG+TGG | + | chr3_3:1946460-1946479 | None:intergenic | 40.0% | |
| !! | GATAAAACAGTAATGGGCGT+GGG | + | chr3_3:1946483-1946502 | None:intergenic | 40.0% |
| !! | AGATAAAACAGTAATGGGCG+TGG | + | chr3_3:1946484-1946503 | None:intergenic | 40.0% |
| AGTAGAGTGAGAGTCAATAG+TGG | + | chr3_3:1946547-1946566 | None:intergenic | 40.0% | |
| AGATGTGTGAGTAAGAGAGT+GGG | + | chr3_3:1946672-1946691 | None:intergenic | 40.0% | |
| AAGATGTGTGAGTAAGAGAG+TGG | + | chr3_3:1946673-1946692 | None:intergenic | 40.0% | |
| !! | CTGCTCTAAAAGATCCTAAG+TGG | - | chr3_3:1946712-1946731 | Msa0437940:intron | 40.0% |
| AAAAGATCCTAAGTGGCATC+TGG | - | chr3_3:1946719-1946738 | Msa0437940:intron | 40.0% | |
| CCCTGATGAATAACCAAACA+TGG | - | chr3_3:1946763-1946782 | Msa0437940:intron | 40.0% | |
| TAGACACAAGTGTCCATGTT+TGG | + | chr3_3:1946779-1946798 | None:intergenic | 40.0% | |
| ACCTGTTAACAGTACCATCA+GGG | + | chr3_3:1946857-1946876 | None:intergenic | 40.0% | |
| TACCTGTTAACAGTACCATC+AGG | + | chr3_3:1946858-1946877 | None:intergenic | 40.0% | |
| AAAACTGTTCTCACTGTGAC+TGG | + | chr3_3:1946960-1946979 | None:intergenic | 40.0% | |
| CTCTAGCCATTACTCAACAT+TGG | - | chr3_3:1946982-1947001 | Msa0437940:intron | 40.0% | |
| TTTACATCAAGCTGTTGGAG+AGG | + | chr3_3:1947008-1947027 | None:intergenic | 40.0% | |
| AGTAAGCAAGCCATTGAGAA+AGG | + | chr3_3:1947036-1947055 | None:intergenic | 40.0% | |
| ! | GCTTACTGAAGAGGTATACA+TGG | - | chr3_3:1947049-1947068 | Msa0437940:intron | 40.0% |
| ! | CCTTATTTAGCTTACACACC+AGG | + | chr3_3:1947109-1947128 | None:intergenic | 40.0% |
| CCTGGTGTGTAAGCTAAATA+AGG | - | chr3_3:1947106-1947125 | Msa0437940:intron | 40.0% | |
| ! | TCTTTCAAACCAAGCTCTAG+GGG | + | chr3_3:1947153-1947172 | None:intergenic | 40.0% |
| GTCTTTCAAACCAAGCTCTA+GGG | + | chr3_3:1947154-1947173 | None:intergenic | 40.0% | |
| AGTCTTTCAAACCAAGCTCT+AGG | + | chr3_3:1947155-1947174 | None:intergenic | 40.0% | |
| TCTCAAGGATTTGGGAAAAC+TGG | - | chr3_3:1947352-1947371 | Msa0437940:intron | 40.0% | |
| ! | AATTTTGTGCTGGATGCCAT+AGG | + | chr3_3:1947497-1947516 | None:intergenic | 40.0% |
| GGAAGGATCAGAAACATTGT+TGG | + | chr3_3:1947534-1947553 | None:intergenic | 40.0% | |
| TTTCTGATCCTTCCTACTTC+AGG | - | chr3_3:1947540-1947559 | Msa0437940:intron | 40.0% | |
| ACTATAGACCTGAAGTAGGA+AGG | + | chr3_3:1947551-1947570 | None:intergenic | 40.0% | |
| TCCTACTTCAGGTCTATAGT+TGG | - | chr3_3:1947551-1947570 | Msa0437940:intron | 40.0% | |
| ACCAACTATAGACCTGAAGT+AGG | + | chr3_3:1947555-1947574 | None:intergenic | 40.0% | |
| TGCAGTATGCCACTATTACA+AGG | - | chr3_3:1947579-1947598 | Msa0437940:intron | 40.0% | |
| ! | GATTTCAGGCCTTGTAATAG+TGG | + | chr3_3:1947591-1947610 | None:intergenic | 40.0% |
| TTGTTCACAGAGGAGATTTC+AGG | + | chr3_3:1947605-1947624 | None:intergenic | 40.0% | |
| TGAAATCTCCTCTGTGAACA+AGG | - | chr3_3:1947604-1947623 | Msa0437940:intron | 40.0% | |
| ! | ATTTTTATCTGCACCTCAGG+AGG | - | chr3_3:1947634-1947653 | Msa0437940:intron | 40.0% |
| TTACAAGGAACTCTGCATCA+TGG | - | chr3_3:1947692-1947711 | Msa0437940:intron | 40.0% | |
| !! | AGGGTTTTGTGATGCTGATT+GGG | - | chr3_3:1947760-1947779 | Msa0437940:intron | 40.0% |
| AAGTACTTCTCCTGTCATCA+GGG | + | chr3_3:1947793-1947812 | None:intergenic | 40.0% | |
| !! | ATGACAGGAGAAGTACTTCT+GGG | - | chr3_3:1947795-1947814 | Msa0437940:intron | 40.0% |
| !!! | CATCTTTTTGGGTCCTAATC+TGG | - | chr3_3:1947823-1947842 | Msa0437940:intron | 40.0% |
| TCCTAATCTGGTATCTTGGT+GGG | - | chr3_3:1947835-1947854 | Msa0437940:intron | 40.0% | |
| AAGCTTCTGCTGAAATAACC+TGG | - | chr3_3:1947918-1947937 | Msa0437940:intron | 40.0% | |
| GGTTATCAAAAAGGAGTTGG+TGG | - | chr3_3:1948088-1948107 | Msa0437940:intron | 40.0% | |
| AAGATAGATGAATCTGGCAG+TGG | + | chr3_3:1948168-1948187 | None:intergenic | 40.0% | |
| TTGTGACACCCTCAGTTTAA+AGG | - | chr3_3:1948205-1948224 | Msa0437940:intron | 40.0% | |
| TGTGACACCCTCAGTTTAAA+GGG | - | chr3_3:1948206-1948225 | Msa0437940:intron | 40.0% | |
| TCACAGCGACCTACAAAAAT+AGG | - | chr3_3:1948505-1948524 | Msa0437940:intron | 40.0% | |
| ACCTACAAAAATAGGTGGCT+AGG | - | chr3_3:1948513-1948532 | Msa0437940:intron | 40.0% | |
| !!! | ACCTAGCCACCTATTTTTGT+AGG | + | chr3_3:1948517-1948536 | None:intergenic | 40.0% |
| CAATAAAAGCCACAAGCCAA+AGG | + | chr3_3:1948851-1948870 | None:intergenic | 40.0% | |
| GCTAATCATTCTCACTTCTC+AGG | - | chr3_3:1948914-1948933 | Msa0437940:CDS | 40.0% | |
| !! | TTTACTGATTCTTGGCAGTG+GGG | - | chr3_3:1949135-1949154 | Msa0437940:intron | 40.0% |
| CATGAGCATTAAGGACAGTT+TGG | + | chr3_3:1949201-1949220 | None:intergenic | 40.0% | |
| CAAACTGTCCTTAATGCTCA+TGG | - | chr3_3:1949199-1949218 | Msa0437940:intron | 40.0% | |
| AACTACACCCATGAGCATTA+AGG | + | chr3_3:1949210-1949229 | None:intergenic | 40.0% | |
| CATCTTGACATTTACGTGTG+CGG | - | chr3_3:1949378-1949397 | Msa0437940:intron | 40.0% | |
| ATCTTGACATTTACGTGTGC+GGG | - | chr3_3:1949379-1949398 | Msa0437940:intron | 40.0% | |
| ! | CTTTATCTGTGACTTGTGCA+TGG | - | chr3_3:1949427-1949446 | Msa0437940:intron | 40.0% |
| TTTATCTGTGTCTTGACGCA+TGG | - | chr3_3:1949477-1949496 | Msa0437940:intron | 40.0% | |
| TTTGTCTGTGTCTTGATGCA+TGG | - | chr3_3:1949527-1949546 | Msa0437940:intron | 40.0% | |
| ATATCTTGGACCTTCTGATG+TGG | - | chr3_3:1949598-1949617 | Msa0437940:intron | 40.0% | |
| TAGAGAAACACCACATCAGA+AGG | + | chr3_3:1949611-1949630 | None:intergenic | 40.0% | |
| TCTTTCTTGTACCACTCTTC+AGG | - | chr3_3:1949755-1949774 | Msa0437940:intron | 40.0% | |
| CTTTCTTGTACCACTCTTCA+GGG | - | chr3_3:1949756-1949775 | Msa0437940:intron | 40.0% | |
| AATGCCAGAGCTTAACCATT+TGG | - | chr3_3:1949917-1949936 | Msa0437940:CDS | 40.0% | |
| AGAGCTTAACCATTTGGTCA+CGG | - | chr3_3:1949923-1949942 | Msa0437940:CDS | 40.0% | |
| GGAGCATAATGCAGCTATTA+TGG | - | chr3_3:1950052-1950071 | Msa0437940:CDS | 40.0% | |
| ACTTAAGTAGCCACCTTGTT+TGG | + | chr3_3:1950135-1950154 | None:intergenic | 40.0% | |
| ACATGTTTCATGACCACTGT+TGG | + | chr3_3:1950272-1950291 | None:intergenic | 40.0% | |
| ACTTCCTGTTAGAAGACGAA+TGG | - | chr3_3:1950351-1950370 | Msa0437940:intron | 40.0% | |
| TTCTCAAATCTGCTTCTACC+TGG | - | chr3_3:1950404-1950423 | Msa0437940:intron | 40.0% | |
| TATAAGAATTCCCAACCCAG+CGG | + | chr3_3:1950538-1950557 | None:intergenic | 40.0% | |
| TGTGTCTGTCTCGGTCAAAA+TGG | + | chr3_3:1938554-1938573 | None:intergenic | 45.0% | |
| !! | GAAGCTTTGTTCTCCAACCA+TGG | + | chr3_3:1938735-1938754 | None:intergenic | 45.0% |
| AATCCACAAGAATTTGGGCC+AGG | - | chr3_3:1939038-1939057 | Msa0437940:intron | 45.0% | |
| ! | TATTATGCATCTCGGCTTGC+GGG | + | chr3_3:1939189-1939208 | None:intergenic | 45.0% |
| ! | GTATTATGCATCTCGGCTTG+CGG | + | chr3_3:1939190-1939209 | None:intergenic | 45.0% |
| GCAAGCCGAGATGCATAATA+CGG | - | chr3_3:1939189-1939208 | Msa0437940:intron | 45.0% | |
| ! | GCCTTATTAATGCCTAGGCT+AGG | - | chr3_3:1939850-1939869 | Msa0437940:intron | 45.0% |
| GCCTAGCCTAGGCATTAATA+AGG | + | chr3_3:1939854-1939873 | None:intergenic | 45.0% | |
| ! | TCTCTGAGGAGAGAGAACAA+GGG | + | chr3_3:1940049-1940068 | None:intergenic | 45.0% |
| ! | ATCTCTGAGGAGAGAGAACA+AGG | + | chr3_3:1940050-1940069 | None:intergenic | 45.0% |
| GTTTGGACTTGATTCACGAC+TGG | - | chr3_3:1940148-1940167 | Msa0437940:intron | 45.0% | |
| TGAAACCTCAAACACTGCCT+TGG | - | chr3_3:1940576-1940595 | Msa0437940:intron | 45.0% | |
| CCAAGTCAAATGCACAGTGA+GGG | + | chr3_3:1940679-1940698 | None:intergenic | 45.0% | |
| CTCTTTCTATTGGGTAGCAG+TGG | - | chr3_3:1940858-1940877 | Msa0437940:intron | 45.0% | |
| TGGGTAGCAGTGGTGAAATA+TGG | - | chr3_3:1940868-1940887 | Msa0437940:intron | 45.0% | |
| GAGCTGCTCATTAACACAGA+CGG | + | chr3_3:1941290-1941309 | None:intergenic | 45.0% | |
| !! | TTTGGCTCTGTTTGGCTTTG+GGG | + | chr3_3:1941448-1941467 | None:intergenic | 45.0% |
| AAAACTCCTGAGAGCCAACA+CGG | + | chr3_3:1941523-1941542 | None:intergenic | 45.0% | |
| CAGTGTAAAAATAGGGTGGG+CGG | - | chr3_3:1941563-1941582 | Msa0437940:intron | 45.0% | |
| AGTGTAAAAATAGGGTGGGC+GGG | - | chr3_3:1941564-1941583 | Msa0437940:intron | 45.0% | |
| ATGGCTTCTCTTTCGAACTC+TGG | - | chr3_3:1941664-1941683 | Msa0437940:intron | 45.0% | |
| TGGAACTAGCATGATCAGGA+AGG | + | chr3_3:1941802-1941821 | None:intergenic | 45.0% | |
| AAATTCCATCGGTATGGTCC+TGG | - | chr3_3:1942239-1942258 | Msa0437940:intron | 45.0% | |
| GTGTAGGAGAAAACGAGAGA+TGG | - | chr3_3:1942341-1942360 | Msa0437940:intron | 45.0% | |
| CGATCTTAGGCTTGTACTAG+TGG | + | chr3_3:1942500-1942519 | None:intergenic | 45.0% | |
| ! | CAACGTACATGCATTGACAG+GGG | + | chr3_3:1943088-1943107 | None:intergenic | 45.0% |
| ! | CCAACGTACATGCATTGACA+GGG | + | chr3_3:1943089-1943108 | None:intergenic | 45.0% |
| ! | TCCAACGTACATGCATTGAC+AGG | + | chr3_3:1943090-1943109 | None:intergenic | 45.0% |
| !! | TTGTGGGGCTCTAAAAACCA+GGG | + | chr3_3:1943250-1943269 | None:intergenic | 45.0% |
| AGCTCAGTAAGAAGCTTGTG+GGG | + | chr3_3:1943265-1943284 | None:intergenic | 45.0% | |
| GAAGCTCAGTAAGAAGCTTG+TGG | + | chr3_3:1943267-1943286 | None:intergenic | 45.0% | |
| ! | TTCCGAAGCACTTTGAGTCT+AGG | + | chr3_3:1943331-1943350 | None:intergenic | 45.0% |
| AGCTTATTGATCCAGTGCCA+TGG | - | chr3_3:1943609-1943628 | Msa0437940:intron | 45.0% | |
| CGTAGTAGCATCAGAAGAAG+AGG | + | chr3_3:1943650-1943669 | None:intergenic | 45.0% | |
| TGAAGCCGGAAACGAAAATC+CGG | - | chr3_3:1943846-1943865 | Msa0437940:intron | 45.0% | |
| CTCGTCAAGGGAGATAACTT+TGG | + | chr3_3:1944220-1944239 | None:intergenic | 45.0% | |
| GCTCCTGAACCTAATTCTCA+AGG | - | chr3_3:1944336-1944355 | Msa0437940:intron | 45.0% | |
| ! | CGTTTTGCTGGAAATTCTGG+TGG | - | chr3_3:1944477-1944496 | Msa0437940:intron | 45.0% |
| GAAGCGAAAATGGCAGTAAC+TGG | + | chr3_3:1944550-1944569 | None:intergenic | 45.0% | |
| !! | GTAATAGTCAGGTTGAGGTG+TGG | + | chr3_3:1944574-1944593 | None:intergenic | 45.0% |
| ! | GGACTGTAATAGTCAGGTTG+AGG | + | chr3_3:1944579-1944598 | None:intergenic | 45.0% |
| CCATAGGGACTGTAATAGTC+AGG | + | chr3_3:1944585-1944604 | None:intergenic | 45.0% | |
| CCTGACTATTACAGTCCCTA+TGG | - | chr3_3:1944582-1944601 | Msa0437940:intron | 45.0% | |
| TAGCTTCCTGGCATTCCATA+GGG | + | chr3_3:1944600-1944619 | None:intergenic | 45.0% | |
| ATAGCTTCCTGGCATTCCAT+AGG | + | chr3_3:1944601-1944620 | None:intergenic | 45.0% | |
| TATGGAATGCCAGGAAGCTA+TGG | - | chr3_3:1944600-1944619 | Msa0437940:intron | 45.0% | |
| ATGCCAGGAAGCTATGGTTA+TGG | - | chr3_3:1944606-1944625 | Msa0437940:intron | 45.0% | |
| TTCTGACTACCAGCTTGAGA+GGG | + | chr3_3:1944714-1944733 | None:intergenic | 45.0% | |
| TTTCTGACTACCAGCTTGAG+AGG | + | chr3_3:1944715-1944734 | None:intergenic | 45.0% | |
| TCTCAAGCTGGTAGTCAGAA+AGG | - | chr3_3:1944714-1944733 | Msa0437940:intron | 45.0% | |
| TGCTTCAGAACCTGTCAAGT+AGG | + | chr3_3:1944754-1944773 | None:intergenic | 45.0% | |
| TCTGGTGTGACATGATGAGT+TGG | + | chr3_3:1944820-1944839 | None:intergenic | 45.0% | |
| ACCAGATGCCTCTAACCTAA+TGG | - | chr3_3:1944834-1944853 | Msa0437940:intron | 45.0% | |
| !! | TCCATTAGGTTAGAGGCATC+TGG | + | chr3_3:1944838-1944857 | None:intergenic | 45.0% |
| ATGGATTCTATGTCCCTCTC+AGG | - | chr3_3:1944853-1944872 | Msa0437940:intron | 45.0% | |
| GAACTTGATCAGAACCTGAG+AGG | + | chr3_3:1944870-1944889 | None:intergenic | 45.0% | |
| GTAGTAGGGTGTAAAGGAGA+AGG | + | chr3_3:1944946-1944965 | None:intergenic | 45.0% | |
| !! | TCTTCTAAGGTGCTCCTAAG+AGG | - | chr3_3:1945096-1945115 | Msa0437940:intron | 45.0% |
| TCAAACTGATAGAGGCCATC+AGG | + | chr3_3:1945132-1945151 | None:intergenic | 45.0% | |
| TGATGGCCTCTATCAGTTTG+AGG | - | chr3_3:1945131-1945150 | Msa0437940:intron | 45.0% | |
| TGGTGTCCTCAAACTGATAG+AGG | + | chr3_3:1945140-1945159 | None:intergenic | 45.0% | |
| TGAGGACACCAAGTCATTCA+AGG | - | chr3_3:1945149-1945168 | Msa0437940:intron | 45.0% | |
| AGCAGGAACCTTGAATGACT+TGG | + | chr3_3:1945160-1945179 | None:intergenic | 45.0% | |
| ! | ACTCTAGGAGTATGGCAGAT+AGG | + | chr3_3:1945183-1945202 | None:intergenic | 45.0% |
| AGCATTTGGCATAGTAGGCT+TGG | - | chr3_3:1945357-1945376 | Msa0437940:intron | 45.0% | |
| !! | CAATGCTTGCTGTCTTGGTA+AGG | - | chr3_3:1945461-1945480 | Msa0437940:intron | 45.0% |
| CTGAAATGTGTGGAGTGTGT+GGG | + | chr3_3:1945661-1945680 | None:intergenic | 45.0% | |
| ! | TCTGAAATGTGTGGAGTGTG+TGG | + | chr3_3:1945662-1945681 | None:intergenic | 45.0% |
| TCTGTTCAAACTGATGGAGG+TGG | - | chr3_3:1945726-1945745 | Msa0437940:intron | 45.0% | |
| !! | TTGGTGATGAGTATGAGGAC+AGG | + | chr3_3:1945806-1945825 | None:intergenic | 45.0% |
| CATAGGCACGTAGTAGAAAC+AGG | - | chr3_3:1945847-1945866 | Msa0437940:intron | 45.0% | |
| !! | TTTGAGGGGCATTTGAGCAT+GGG | + | chr3_3:1945887-1945906 | None:intergenic | 45.0% |
| !! | ATTTGAGGGGCATTTGAGCA+TGG | + | chr3_3:1945888-1945907 | None:intergenic | 45.0% |
| TCAAATGCCCCTCAAATCCT+GGG | - | chr3_3:1945891-1945910 | Msa0437940:intron | 45.0% | |
| AGCATGATCCCAGGATTTGA+GGG | + | chr3_3:1945902-1945921 | None:intergenic | 45.0% | |
| AAGCATGATCCCAGGATTTG+AGG | + | chr3_3:1945903-1945922 | None:intergenic | 45.0% | |
| ! | TGTGAGAAAAGCATGATCCC+AGG | + | chr3_3:1945911-1945930 | None:intergenic | 45.0% |
| ! | TCCAAGGAGTGTGTGTTCTT+AGG | - | chr3_3:1946093-1946112 | Msa0437940:intron | 45.0% |
| ! | CCAAGGAGTGTGTGTTCTTA+GGG | - | chr3_3:1946094-1946113 | Msa0437940:intron | 45.0% |
| GGGTATTCCAGTCATCACAA+AGG | - | chr3_3:1946114-1946133 | Msa0437940:intron | 45.0% | |
| GTAGACAAAGTTGGACCATC+TGG | + | chr3_3:1946255-1946274 | None:intergenic | 45.0% | |
| TGAGACAGGTGTACGTAAGA+AGG | + | chr3_3:1946277-1946296 | None:intergenic | 45.0% | |
| CAGATTCAATAGATGGAGGG+TGG | + | chr3_3:1946368-1946387 | None:intergenic | 45.0% | |
| GTATGAGTAATAGGGGATGC+AGG | + | chr3_3:1946393-1946412 | None:intergenic | 45.0% | |
| ! | GATGTAGCTGATGAGTTGAC+AGG | + | chr3_3:1946417-1946436 | None:intergenic | 45.0% |
| ATAGGTGTGGATGAAAGAGC+AGG | + | chr3_3:1946447-1946466 | None:intergenic | 45.0% | |
| GTGGGATTTAGCACACTCAT+AGG | + | chr3_3:1946465-1946484 | None:intergenic | 45.0% | |
| !! | GGAGAGTTTTGTGAAGGAGA+AGG | + | chr3_3:1946507-1946526 | None:intergenic | 45.0% |
| !! | TCAGGAGGAGAGTTTTGTGA+AGG | + | chr3_3:1946513-1946532 | None:intergenic | 45.0% |
| ATAGTGGTAGCAGAAGACTC+AGG | + | chr3_3:1946531-1946550 | None:intergenic | 45.0% | |
| ATGAGAACAAGAGGCAAGCT+TGG | - | chr3_3:1946624-1946643 | Msa0437940:intron | 45.0% | |
| TAAGAGAGTGGGATGAAGTC+TGG | + | chr3_3:1946661-1946680 | None:intergenic | 45.0% | |
| ! | TTCATAGCCAGATGCCACTT+AGG | + | chr3_3:1946729-1946748 | None:intergenic | 45.0% |
| CTGCCAACAGACATGCTATA+GGG | - | chr3_3:1946802-1946821 | Msa0437940:intron | 45.0% | |
| ACATGCTATAGGGTGCAAGT+GGG | - | chr3_3:1946812-1946831 | Msa0437940:intron | 45.0% | |
| AGAGTCAAAGAGAACCCTGA+TGG | - | chr3_3:1946840-1946859 | Msa0437940:intron | 45.0% | |
| ACCCTGATGGTACTGTTAAC+AGG | - | chr3_3:1946853-1946872 | Msa0437940:intron | 45.0% | |
| GATGAAACCCTTATGCAACC+AGG | + | chr3_3:1946890-1946909 | None:intergenic | 45.0% | |
| TAAGGGTTTCATCAGCAAGC+TGG | - | chr3_3:1946897-1946916 | Msa0437940:intron | 45.0% | |
| AAGGGTTTCATCAGCAAGCT+GGG | - | chr3_3:1946898-1946917 | Msa0437940:intron | 45.0% | |
| !! | ACTGTGACTGGCTTAACAAC+TGG | + | chr3_3:1946948-1946967 | None:intergenic | 45.0% |
| GAGAGGCCAATGTTGAGTAA+TGG | + | chr3_3:1946991-1947010 | None:intergenic | 45.0% | |
| !! | CAATGGCTTGCTTACTGAAG+AGG | - | chr3_3:1947040-1947059 | Msa0437940:intron | 45.0% |
| TTGTCAGAGGCTTCAAAACC+AGG | + | chr3_3:1947083-1947102 | None:intergenic | 45.0% | |
| ! | GGCACTCTATGGATTGAAAC+AGG | - | chr3_3:1947127-1947146 | Msa0437940:intron | 45.0% |
| TACCACTGCCATTCAACAAC+TGG | - | chr3_3:1947304-1947323 | Msa0437940:CDS | 45.0% | |
| CTGATGCACCAGTTGTTGAA+TGG | + | chr3_3:1947315-1947334 | None:intergenic | 45.0% | |
| ! | GTAGAGAACCTGATGGTGAA+TGG | + | chr3_3:1947403-1947422 | None:intergenic | 45.0% |
| GACAAGAGTAGAGAACCTGA+TGG | + | chr3_3:1947410-1947429 | None:intergenic | 45.0% | |
| AAACAGTATGGCCTCACCTA+TGG | - | chr3_3:1947478-1947497 | Msa0437940:intron | 45.0% | |
| CAAAACCCTGTGATTGCAAG+TGG | + | chr3_3:1947749-1947768 | None:intergenic | 45.0% | |
| !! | CAGGGTTTTGTGATGCTGAT+TGG | - | chr3_3:1947759-1947778 | Msa0437940:intron | 45.0% |
| ! | GAAGTACTTCTCCTGTCATC+AGG | + | chr3_3:1947794-1947813 | None:intergenic | 45.0% |
| !! | GATGACAGGAGAAGTACTTC+TGG | - | chr3_3:1947794-1947813 | Msa0437940:intron | 45.0% |
| !! | TGACAGGAGAAGTACTTCTG+GGG | - | chr3_3:1947796-1947815 | Msa0437940:intron | 45.0% |
| !!! | TTCTGGGGCATGCATCTTTT+TGG | - | chr3_3:1947811-1947830 | Msa0437940:intron | 45.0% |
| !! | TCTGGGGCATGCATCTTTTT+GGG | - | chr3_3:1947812-1947831 | Msa0437940:intron | 45.0% |
| TGGGTCCTAATCTGGTATCT+TGG | - | chr3_3:1947831-1947850 | Msa0437940:intron | 45.0% | |
| GTCCTAATCTGGTATCTTGG+TGG | - | chr3_3:1947834-1947853 | Msa0437940:intron | 45.0% | |
| GTGACACCCTCAGTTTAAAG+GGG | - | chr3_3:1948207-1948226 | Msa0437940:intron | 45.0% | |
| CAGCGACCTACAAAAATAGG+TGG | - | chr3_3:1948508-1948527 | Msa0437940:intron | 45.0% | |
| GCTACATTGATGCTGGACTT+TGG | - | chr3_3:1948736-1948755 | Msa0437940:intron | 45.0% | |
| TGACGCAGAGGATCATACTT+AGG | + | chr3_3:1948960-1948979 | None:intergenic | 45.0% | |
| TCCTCTGCGTCACACAAAAT+TGG | - | chr3_3:1948968-1948987 | Msa0437940:intron | 45.0% | |
| ! | TCCAATTTTGTGTGACGCAG+AGG | + | chr3_3:1948972-1948991 | None:intergenic | 45.0% |
| CCTCCAACCAAAGATGCAAA+GGG | - | chr3_3:1949014-1949033 | Msa0437940:intron | 45.0% | |
| AACCAAAGATGCAAAGGGCT+CGG | - | chr3_3:1949019-1949038 | Msa0437940:intron | 45.0% | |
| TTGGTTGAAAGGGAAGGGAA+AGG | + | chr3_3:1949277-1949296 | None:intergenic | 45.0% | |
| ACCATTGAATGTCGCTAGCT+GGG | + | chr3_3:1949320-1949339 | None:intergenic | 45.0% | |
| AACCATTGAATGTCGCTAGC+TGG | + | chr3_3:1949321-1949340 | None:intergenic | 45.0% | |
| ! | ATCCTTTGCTATCCTGCCTT+GGG | - | chr3_3:1949404-1949423 | Msa0437940:intron | 45.0% |
| CAAGTCACAGATAAAGCCCA+AGG | + | chr3_3:1949423-1949442 | None:intergenic | 45.0% | |
| CAAGACACAGATAAAGCTCG+AGG | + | chr3_3:1949472-1949491 | None:intergenic | 45.0% | |
| ! | ATCCTTTGCTATCCTGCCTT+GGG | - | chr3_3:1949404-1949423 | Msa0437940:intron | 45.0% |
| TCCATCAGATGGCCAAATAC+TGG | + | chr3_3:1949654-1949673 | None:intergenic | 45.0% | |
| TGATGGAGCTGTGATCACAT+AGG | - | chr3_3:1949667-1949686 | Msa0437940:intron | 45.0% | |
| GATGGAGCTGTGATCACATA+GGG | - | chr3_3:1949668-1949687 | Msa0437940:intron | 45.0% | |
| TGAAGTCTGCTGGAGGAAAA+GGG | - | chr3_3:1949694-1949713 | Msa0437940:intron | 45.0% | |
| AATCACTTCGTGCACTTGCT+CGG | - | chr3_3:1949730-1949749 | Msa0437940:intron | 45.0% | |
| TGTTTACACACCCTGAAGAG+TGG | + | chr3_3:1949769-1949788 | None:intergenic | 45.0% | |
| GTGACCAAATGGTTAAGCTC+TGG | + | chr3_3:1949924-1949943 | None:intergenic | 45.0% | |
| AACAGGAAGTCTTTCACTCG+AGG | + | chr3_3:1950341-1950360 | None:intergenic | 45.0% | |
| AAAACAGTAGTTCTCCAGCC+AGG | + | chr3_3:1950425-1950444 | None:intergenic | 45.0% | |
| AAGGTGAGATTGAATTCCGC+TGG | - | chr3_3:1950519-1950538 | Msa0437940:CDS | 45.0% | |
| AGGTGAGATTGAATTCCGCT+GGG | - | chr3_3:1950520-1950539 | Msa0437940:CDS | 45.0% | |
| AGATTGAATTCCGCTGGGTT+GGG | - | chr3_3:1950525-1950544 | Msa0437940:CDS | 45.0% | |
| !! | CAATTAATTAATAAAATATT+GGG | + | chr3_3:1940779-1940798 | None:intergenic | 5.0% |
| !!! | ACTATTTTTTTAATTTTTTT+AGG | - | chr3_3:1949791-1949810 | Msa0437940:intron | 5.0% |
| AGTCACAGTGAGATGGAGAG+TGG | + | chr3_3:1938586-1938605 | None:intergenic | 50.0% | |
| TGCGTTCAGTCACAGTGAGA+TGG | + | chr3_3:1938593-1938612 | None:intergenic | 50.0% | |
| ! | GGGAAGCGTACCACAGAATA+AGG | + | chr3_3:1938858-1938877 | None:intergenic | 50.0% |
| GTACCTGGCCCAAATTCTTG+TGG | + | chr3_3:1939044-1939063 | None:intergenic | 50.0% | |
| ! | ATTATGCATCTCGGCTTGCG+GGG | + | chr3_3:1939188-1939207 | None:intergenic | 50.0% |
| GCATATTGGAGTTGGGCTTC+AGG | - | chr3_3:1939883-1939902 | Msa0437940:intron | 50.0% | |
| TTAGACTGCCTAACAGCTCG+AGG | - | chr3_3:1939919-1939938 | Msa0437940:intron | 50.0% | |
| ACACACACACACACACGTAC+AGG | + | chr3_3:1940111-1940130 | None:intergenic | 50.0% | |
| TTCATGCATGCATGCGCACT+AGG | - | chr3_3:1940372-1940391 | Msa0437940:intron | 50.0% | |
| GCATGCGCACTAGGTAAATC+AGG | - | chr3_3:1940381-1940400 | Msa0437940:intron | 50.0% | |
| CAAGACATCAACGACGTGAG+AGG | + | chr3_3:1940521-1940540 | None:intergenic | 50.0% | |
| GTCAAATGCACAGTGAGGGA+GGG | + | chr3_3:1940675-1940694 | None:intergenic | 50.0% | |
| AGTCAAATGCACAGTGAGGG+AGG | + | chr3_3:1940676-1940695 | None:intergenic | 50.0% | |
| CCCTCACTGTGCATTTGACT+TGG | - | chr3_3:1940676-1940695 | Msa0437940:intron | 50.0% | |
| GCCAAGTCAAATGCACAGTG+AGG | + | chr3_3:1940680-1940699 | None:intergenic | 50.0% | |
| TCAATCCCATAGTCCCGTGT+TGG | - | chr3_3:1941506-1941525 | Msa0437940:intron | 50.0% | |
| AAACTCCTGAGAGCCAACAC+GGG | + | chr3_3:1941522-1941541 | None:intergenic | 50.0% | |
| GTGTAAAAATAGGGTGGGCG+GGG | - | chr3_3:1941565-1941584 | Msa0437940:intron | 50.0% | |
| AGACGCCACCAAACAAAGTC+AGG | + | chr3_3:1941777-1941796 | None:intergenic | 50.0% | |
| !! | ACCAGTTGGCTCTAGAGCAT+GGG | - | chr3_3:1941947-1941966 | Msa0437940:intron | 50.0% |
| ! | TAGAGCATGGGGAAGCACAA+AGG | - | chr3_3:1941959-1941978 | Msa0437940:intron | 50.0% |
| ! | AGAGCATGGGGAAGCACAAA+GGG | - | chr3_3:1941960-1941979 | Msa0437940:intron | 50.0% |
| CCCTGTCAATGCATGTACGT+TGG | - | chr3_3:1943086-1943105 | Msa0437940:intron | 50.0% | |
| !! | CTTGTGGGGCTCTAAAAACC+AGG | + | chr3_3:1943251-1943270 | None:intergenic | 50.0% |
| !!! | GGAATCGTTTTGAGAGGCCA+TGG | + | chr3_3:1943629-1943648 | None:intergenic | 50.0% |
| !!! | GAAGGTTTTGGATGCTGCAG+CGG | + | chr3_3:1943683-1943702 | None:intergenic | 50.0% |
| TCTTCAATGGAAGCAGCAGG+TGG | - | chr3_3:1943741-1943760 | Msa0437940:intron | 50.0% | |
| AGGAAAACCGGTGGAATCGA+CGG | + | chr3_3:1943811-1943830 | None:intergenic | 50.0% | |
| ! | GTACGCCGGATTTTCGTTTC+CGG | + | chr3_3:1943854-1943873 | None:intergenic | 50.0% |
| AAGACTCCTTGCTCTGTACG+TGG | - | chr3_3:1943890-1943909 | Msa0437940:intron | 50.0% | |
| CAGAATCCACGTACAGAGCA+AGG | + | chr3_3:1943899-1943918 | None:intergenic | 50.0% | |
| !! | GTGAGCCTTTGGTGATGGAT+CGG | + | chr3_3:1944050-1944069 | None:intergenic | 50.0% |
| CTGCGATTCAAGCTCGTCAA+GGG | + | chr3_3:1944232-1944251 | None:intergenic | 50.0% | |
| TGAATCGCAGCTTCTCACTC+AGG | - | chr3_3:1944242-1944261 | Msa0437940:intron | 50.0% | |
| ! | GGTTTCAGTTCTGATGCACG+TGG | - | chr3_3:1944357-1944376 | Msa0437940:intron | 50.0% |
| CTCCCCCCAAAATTAGGGTT+AGG | + | chr3_3:1944402-1944421 | None:intergenic | 50.0% | |
| !! | AACCCTAATTTTGGGGGGAG+AGG | - | chr3_3:1944402-1944421 | Msa0437940:intron | 50.0% |
| GACCTCTCCCCCCAAAATTA+GGG | + | chr3_3:1944407-1944426 | None:intergenic | 50.0% | |
| TGACCTCTCCCCCCAAAATT+AGG | + | chr3_3:1944408-1944427 | None:intergenic | 50.0% | |
| !! | GGCCGTTTTGCTGGAAATTC+TGG | - | chr3_3:1944474-1944493 | Msa0437940:intron | 50.0% |
| GAGGTGTGGAGAAGCGAAAA+TGG | + | chr3_3:1944560-1944579 | None:intergenic | 50.0% | |
| TACAGTCCCTATGGAATGCC+AGG | - | chr3_3:1944591-1944610 | Msa0437940:intron | 50.0% | |
| CCACCATAACCATAGCTTCC+TGG | + | chr3_3:1944612-1944631 | None:intergenic | 50.0% | |
| CCAGGAAGCTATGGTTATGG+TGG | - | chr3_3:1944609-1944628 | Msa0437940:intron | 50.0% | |
| CACATTTGAAGGAGCCCCAT+AGG | + | chr3_3:1944643-1944662 | None:intergenic | 50.0% | |
| ATGGGGCTCCTTCAAATGTG+TGG | - | chr3_3:1944643-1944662 | Msa0437940:intron | 50.0% | |
| GGCTGCATCCACACATTTGA+AGG | + | chr3_3:1944654-1944673 | None:intergenic | 50.0% | |
| CTCAAGCACCTGGTCAGTTT+AGG | - | chr3_3:1944685-1944704 | Msa0437940:intron | 50.0% | |
| CTGTCAAGTAGGCTTGAGCA+GGG | + | chr3_3:1944743-1944762 | None:intergenic | 50.0% | |
| ! | GAGTTGGTTGCACCTGAATC+TGG | + | chr3_3:1944804-1944823 | None:intergenic | 50.0% |
| !! | GTGCTCCTAAGAGGTGTTCT+TGG | - | chr3_3:1945105-1945124 | Msa0437940:intron | 50.0% |
| CAGGTCCAAGAACACCTCTT+AGG | + | chr3_3:1945113-1945132 | None:intergenic | 50.0% | |
| !! | AGAGGTGTTCTTGGACCTGA+TGG | - | chr3_3:1945114-1945133 | Msa0437940:intron | 50.0% |
| GCTTGGACACCCTAATCATG+AGG | - | chr3_3:1945374-1945393 | Msa0437940:intron | 50.0% | |
| CATGATGACTCAACAGGTGC+AGG | + | chr3_3:1945564-1945583 | None:intergenic | 50.0% | |
| GCACCTGTTGAGTCATCATG+TGG | - | chr3_3:1945564-1945583 | Msa0437940:intron | 50.0% | |
| GAGCATGGGATAAAAGGGTG+AGG | + | chr3_3:1945873-1945892 | None:intergenic | 50.0% | |
| CTCAAATGCCCCTCAAATCC+TGG | - | chr3_3:1945890-1945909 | Msa0437940:intron | 50.0% | |
| GCATGATCCCAGGATTTGAG+GGG | + | chr3_3:1945901-1945920 | None:intergenic | 50.0% | |
| CCCTAAGAACACACACTCCT+TGG | + | chr3_3:1946097-1946116 | None:intergenic | 50.0% | |
| GGAACAAGAGGAGTAGACAC+AGG | + | chr3_3:1946573-1946592 | None:intergenic | 50.0% | |
| CCTATAGCATGTCTGTTGGC+AGG | + | chr3_3:1946804-1946823 | None:intergenic | 50.0% | |
| CCTGCCAACAGACATGCTAT+AGG | - | chr3_3:1946801-1946820 | Msa0437940:intron | 50.0% | |
| GCACCCTATAGCATGTCTGT+TGG | + | chr3_3:1946808-1946827 | None:intergenic | 50.0% | |
| GACATGCTATAGGGTGCAAG+TGG | - | chr3_3:1946811-1946830 | Msa0437940:intron | 50.0% | |
| TAACAGGTATAAGGCACGCC+TGG | - | chr3_3:1946869-1946888 | Msa0437940:intron | 50.0% | |
| TCAGAGGCTTCAAAACCAGG+AGG | + | chr3_3:1947080-1947099 | None:intergenic | 50.0% | |
| TGAAGCCTCTGACAAGAACC+TGG | - | chr3_3:1947088-1947107 | Msa0437940:intron | 50.0% | |
| ACACACCAGGTTCTTGTCAG+AGG | + | chr3_3:1947096-1947115 | None:intergenic | 50.0% | |
| CACCAGTTGTTGAATGGCAG+TGG | + | chr3_3:1947309-1947328 | None:intergenic | 50.0% | |
| GAGGTTCACCATTCACCATC+AGG | - | chr3_3:1947392-1947411 | Msa0437940:intron | 50.0% | |
| ! | TTGACACGCCTTGTTCACAG+AGG | + | chr3_3:1947615-1947634 | None:intergenic | 50.0% |
| TGCAAGTGGCTCAGTAGTAC+TGG | + | chr3_3:1947735-1947754 | None:intergenic | 50.0% | |
| ACTGAGCCACTTGCAATCAC+AGG | - | chr3_3:1947740-1947759 | Msa0437940:intron | 50.0% | |
| CTGAGCCACTTGCAATCACA+GGG | - | chr3_3:1947741-1947760 | Msa0437940:intron | 50.0% | |
| GCCCACCAAGATACCAGATT+AGG | + | chr3_3:1947839-1947858 | None:intergenic | 50.0% | |
| TCTGTACTCAGCTTCTGCAC+TGG | + | chr3_3:1947888-1947907 | None:intergenic | 50.0% | |
| ATGTGCCTGCTCAAGATCAG+TGG | - | chr3_3:1948117-1948136 | Msa0437940:intron | 50.0% | |
| TCTGTCCACTGATCTTGAGC+AGG | + | chr3_3:1948125-1948144 | None:intergenic | 50.0% | |
| ATGAATCTGGCAGTGGACAG+AGG | + | chr3_3:1948161-1948180 | None:intergenic | 50.0% | |
| GCCTCCAACCAAAGATGCAA+AGG | - | chr3_3:1949013-1949032 | Msa0437940:intron | 50.0% | |
| CCCTTTGCATCTTTGGTTGG+AGG | + | chr3_3:1949017-1949036 | None:intergenic | 50.0% | |
| GAGCCCTTTGCATCTTTGGT+TGG | + | chr3_3:1949020-1949039 | None:intergenic | 50.0% | |
| ! | TTCTTGGCAGTGGGGTCTTT+TGG | - | chr3_3:1949143-1949162 | Msa0437940:intron | 50.0% |
| ACCCAGCTAGCGACATTCAA+TGG | - | chr3_3:1949316-1949335 | Msa0437940:intron | 50.0% | |
| ! | CATCCTTTGCTATCCTGCCT+TGG | - | chr3_3:1949403-1949422 | Msa0437940:intron | 50.0% |
| TCACAGATAAAGCCCAAGGC+AGG | + | chr3_3:1949419-1949438 | None:intergenic | 50.0% | |
| ACACAGATAAAGCTCGAGGC+AGG | + | chr3_3:1949468-1949487 | None:intergenic | 50.0% | |
| ! | CATCCTTTGCTATCCTGCCT+TGG | - | chr3_3:1949403-1949422 | Msa0437940:intron | 50.0% |
| CAAGACACAGACAAAGCCCA+AGG | + | chr3_3:1949522-1949541 | None:intergenic | 50.0% | |
| GCCAGTATTTGGCCATCTGA+TGG | - | chr3_3:1949650-1949669 | Msa0437940:intron | 50.0% | |
| GTGATCACAGCTCCATCAGA+TGG | + | chr3_3:1949665-1949684 | None:intergenic | 50.0% | |
| GTGAAGTCTGCTGGAGGAAA+AGG | - | chr3_3:1949693-1949712 | Msa0437940:intron | 50.0% | |
| TCTGCTGGAGGAAAAGGGAA+GGG | - | chr3_3:1949699-1949718 | Msa0437940:intron | 50.0% | |
| GCAAGTGCACGAAGTGATTG+TGG | + | chr3_3:1949729-1949748 | None:intergenic | 50.0% | |
| ATCACTTCGTGCACTTGCTC+GGG | - | chr3_3:1949731-1949750 | Msa0437940:intron | 50.0% | |
| GCTTAACCATTTGGTCACGG+AGG | - | chr3_3:1949926-1949945 | Msa0437940:intron | 50.0% | |
| AGGCTGCACAAACTGATGGT+AGG | - | chr3_3:1949946-1949965 | Msa0437940:intron | 50.0% | |
| TGCACAAACTGATGGTAGGC+TGG | - | chr3_3:1949950-1949969 | Msa0437940:intron | 50.0% | |
| ! | AAACTGATGGTAGGCTGGCT+AGG | - | chr3_3:1949955-1949974 | Msa0437940:intron | 50.0% |
| CGAGCCATTCGTCTTCTAAC+AGG | + | chr3_3:1950358-1950377 | None:intergenic | 50.0% | |
| ATGGCTCGAGATCTCTTGCA+CGG | - | chr3_3:1950370-1950389 | Msa0437940:intron | 50.0% | |
| CAAATCTGCTTCTACCTGGC+TGG | - | chr3_3:1950408-1950427 | Msa0437940:intron | 50.0% | |
| CAGTAAATGGCTACAGCCAC+AGG | - | chr3_3:1950461-1950480 | Msa0437940:CDS | 50.0% | |
| TAAATGGCTACAGCCACAGG+AGG | - | chr3_3:1950464-1950483 | Msa0437940:CDS | 50.0% | |
| CCTACTTCATAGTCCTCCTG+TGG | + | chr3_3:1950480-1950499 | None:intergenic | 50.0% | |
| CCACAGGAGGACTATGAAGT+AGG | - | chr3_3:1950477-1950496 | Msa0437940:CDS | 50.0% | |
| GAGATTGAATTCCGCTGGGT+TGG | - | chr3_3:1950524-1950543 | Msa0437940:CDS | 50.0% | |
| GGGGGAAGACAGCTGACATA+AGG | + | chr3_3:1939169-1939188 | None:intergenic | 55.0% | |
| ! | TTATGCATCTCGGCTTGCGG+GGG | + | chr3_3:1939187-1939206 | None:intergenic | 55.0% |
| !! | GGAGTTGGGCTTCAGGTTGT+AGG | - | chr3_3:1939890-1939909 | Msa0437940:intron | 55.0% |
| AAATGCACAGTGAGGGAGGG+TGG | + | chr3_3:1940672-1940691 | None:intergenic | 55.0% | |
| GAGAGCCAACACGGGACTAT+GGG | + | chr3_3:1941514-1941533 | None:intergenic | 55.0% | |
| TGAGAGCCAACACGGGACTA+TGG | + | chr3_3:1941515-1941534 | None:intergenic | 55.0% | |
| !! | ATAGTCCCGTGTTGGCTCTC+AGG | - | chr3_3:1941514-1941533 | Msa0437940:intron | 55.0% |
| !! | GACCAGTTGGCTCTAGAGCA+TGG | - | chr3_3:1941946-1941965 | Msa0437940:intron | 55.0% |
| !! | CCAGTTGGCTCTAGAGCATG+GGG | - | chr3_3:1941948-1941967 | Msa0437940:intron | 55.0% |
| AACGTCCAGGACCATACCGA+TGG | + | chr3_3:1942247-1942266 | None:intergenic | 55.0% | |
| !!! | GTTTTGAGAGGCCATGGCAC+TGG | + | chr3_3:1943623-1943642 | None:intergenic | 55.0% |
| CAATGGAAGCAGCAGGTGGA+AGG | - | chr3_3:1943745-1943764 | Msa0437940:intron | 55.0% | |
| ACCACGTCGGAGAGGAAAAC+CGG | + | chr3_3:1943823-1943842 | None:intergenic | 55.0% | |
| AAAATCCGGCGTACACCGCA+TGG | - | chr3_3:1943860-1943879 | Msa0437940:intron | 55.0% | |
| AAATCCGGCGTACACCGCAT+GGG | - | chr3_3:1943861-1943880 | Msa0437940:intron | 55.0% | |
| GGAGTCTTGCTCTTCCCATG+CGG | + | chr3_3:1943878-1943897 | None:intergenic | 55.0% | |
| ! | TGATGGATCGGAGCTCCGAT+CGG | + | chr3_3:1944038-1944057 | None:intergenic | 55.0% |
| GAGCTCCGATCCATCACCAA+AGG | - | chr3_3:1944042-1944061 | Msa0437940:intron | 55.0% | |
| GCTGCGATTCAAGCTCGTCA+AGG | + | chr3_3:1944233-1944252 | None:intergenic | 55.0% | |
| AGAGGTCAGTTCAGAGGTCG+TGG | - | chr3_3:1944420-1944439 | Msa0437940:intron | 55.0% | |
| TTCCAGCAAAACGGCCACCA+CGG | + | chr3_3:1944470-1944489 | None:intergenic | 55.0% | |
| TTTAGGCCACCCTCTCAAGC+TGG | - | chr3_3:1944702-1944721 | Msa0437940:intron | 55.0% | |
| TGACTACCAGCTTGAGAGGG+TGG | + | chr3_3:1944711-1944730 | None:intergenic | 55.0% | |
| CCTGTCAAGTAGGCTTGAGC+AGG | + | chr3_3:1944744-1944763 | None:intergenic | 55.0% | |
| CCTGCTCAAGCCTACTTGAC+AGG | - | chr3_3:1944741-1944760 | Msa0437940:intron | 55.0% | |
| GGAGTATGGCAGATAGGAGC+AGG | + | chr3_3:1945177-1945196 | None:intergenic | 55.0% | |
| GTGGTAGCAGAAGACTCAGG+AGG | + | chr3_3:1946528-1946547 | None:intergenic | 55.0% | |
| GAGTGGGATGAAGTCTGGCT+TGG | + | chr3_3:1946656-1946675 | None:intergenic | 55.0% | |
| AAGGCACGCCTGGTTGCATA+AGG | - | chr3_3:1946879-1946898 | Msa0437940:intron | 55.0% | |
| AGGCACGCCTGGTTGCATAA+GGG | - | chr3_3:1946880-1946899 | Msa0437940:intron | 55.0% | |
| GTATACATGGAGCAGCCTCC+TGG | - | chr3_3:1947062-1947081 | Msa0437940:intron | 55.0% | |
| TGAAACAGGCCCCTAGAGCT+TGG | - | chr3_3:1947141-1947160 | Msa0437940:intron | 55.0% | |
| TGTGCTGGATGCCATAGGTG+AGG | + | chr3_3:1947492-1947511 | None:intergenic | 55.0% | |
| TACTGGCAGGTGTGAGAAGC+AGG | + | chr3_3:1947718-1947737 | None:intergenic | 55.0% | |
| !! | AGTGGCTCAGTAGTACTGGC+AGG | + | chr3_3:1947731-1947750 | None:intergenic | 55.0% |
| CTCCGAGCCCTTTGCATCTT+TGG | + | chr3_3:1949024-1949043 | None:intergenic | 55.0% | |
| AGCCCAAGGCAGGATAGCAA+AGG | + | chr3_3:1949409-1949428 | None:intergenic | 55.0% | |
| AGCTCGAGGCAGGATAGCAA+AGG | + | chr3_3:1949458-1949477 | None:intergenic | 55.0% | |
| AGCCCAAGGCAGGATAGCAA+AGG | + | chr3_3:1949409-1949428 | None:intergenic | 55.0% | |
| ACACAGACAAAGCCCAAGGC+AGG | + | chr3_3:1949518-1949537 | None:intergenic | 55.0% | |
| GGAGCTGTGATCACATAGGG+AGG | - | chr3_3:1949671-1949690 | Msa0437940:intron | 55.0% | |
| CATAGGGAGGTGAAGTCTGC+TGG | - | chr3_3:1949684-1949703 | Msa0437940:intron | 55.0% | |
| GTCTGCTGGAGGAAAAGGGA+AGG | - | chr3_3:1949698-1949717 | Msa0437940:intron | 55.0% | |
| ACGGAGGCTGCACAAACTGA+TGG | - | chr3_3:1949942-1949961 | Msa0437940:intron | 55.0% | |
| ATGCAGAGACCAGCGACGGA+GGG | + | chr3_3:1938640-1938659 | None:intergenic | 60.0% | |
| TATGCAGAGACCAGCGACGG+AGG | + | chr3_3:1938641-1938660 | None:intergenic | 60.0% | |
| CGGTATGCAGAGACCAGCGA+CGG | + | chr3_3:1938644-1938663 | None:intergenic | 60.0% | |
| !! | CCCCATGCTCTAGAGCCAAC+TGG | + | chr3_3:1941951-1941970 | None:intergenic | 60.0% |
| ! | CAGGTGGAAGGTGTGCTTCG+TGG | - | chr3_3:1943757-1943776 | Msa0437940:intron | 60.0% |
| !! | TGTCTCGCCGTCGATTCCAC+CGG | - | chr3_3:1943801-1943820 | Msa0437940:intron | 60.0% |
| ACGTCGGAGAGGAAAACCGG+TGG | + | chr3_3:1943820-1943839 | None:intergenic | 60.0% | |
| !! | ACCGGTTTTCCTCTCCGACG+TGG | - | chr3_3:1943819-1943838 | Msa0437940:intron | 60.0% |
| TCTTCCCATGCGGTGTACGC+CGG | + | chr3_3:1943868-1943887 | None:intergenic | 60.0% | |
| TCTCGCCATCGCTTCTCTCG+CGG | - | chr3_3:1943926-1943945 | Msa0437940:intron | 60.0% | |
| ACGAACCGCGAGAGAAGCGA+TGG | + | chr3_3:1943934-1943953 | None:intergenic | 60.0% | |
| GCGTTCGCGTCAACTCCGAT+CGG | - | chr3_3:1944020-1944039 | Msa0437940:intron | 60.0% | |
| GGTGCGTGAGCCTTTGGTGA+TGG | + | chr3_3:1944055-1944074 | None:intergenic | 60.0% | |
| AGCAACGGTGCGTGAGCCTT+TGG | + | chr3_3:1944061-1944080 | None:intergenic | 60.0% | |
| GGTCAGTTCAGAGGTCGTGG+TGG | - | chr3_3:1944423-1944442 | Msa0437940:intron | 60.0% | |
| GGCCTCTAAACCTGCCTCCA+CGG | + | chr3_3:1944449-1944468 | None:intergenic | 60.0% | |
| GGTGCTTGAGCACGAGGCAT+AGG | + | chr3_3:1944675-1944694 | None:intergenic | 60.0% | |
| ATGCCTCGTGCTCAAGCACC+TGG | - | chr3_3:1944675-1944694 | Msa0437940:intron | 60.0% | |
| TGACCAGGTGCTTGAGCACG+AGG | + | chr3_3:1944681-1944700 | None:intergenic | 60.0% | |
| GAGGGTGGCCTAAACTGACC+AGG | + | chr3_3:1944696-1944715 | None:intergenic | 60.0% | |
| GGTCTGGCCATCACCTCTGT+TGG | - | chr3_3:1944907-1944926 | Msa0437940:intron | 60.0% | |
| GCTTTCCAGTGCTCCTCCTG+AGG | + | chr3_3:1947650-1947669 | None:intergenic | 60.0% | |
| GGGCTTCAGACCCTGATGAC+AGG | - | chr3_3:1947780-1947799 | Msa0437940:intron | 60.0% | |
| AGGGAGGTGAAGTCTGCTGG+AGG | - | chr3_3:1949687-1949706 | Msa0437940:intron | 60.0% | |
| GTGCAGCCTCCGTGACCAAA+TGG | + | chr3_3:1949935-1949954 | None:intergenic | 60.0% | |
| CTTCACGCACCACGTCGGAG+AGG | + | chr3_3:1943831-1943850 | None:intergenic | 65.0% | |
| TCCGACGTGGTGCGTGAAGC+CGG | - | chr3_3:1943832-1943851 | Msa0437940:intron | 65.0% | |
| TCCGGCTTCACGCACCACGT+CGG | + | chr3_3:1943836-1943855 | None:intergenic | 65.0% | |
| GGGGGGAGAGGTCAGTTCAG+AGG | - | chr3_3:1944414-1944433 | Msa0437940:intron | 65.0% | |
| TTCAGAGGTCGTGGTGGCCG+TGG | - | chr3_3:1944429-1944448 | Msa0437940:intron | 65.0% | |
| GGCCGTGGAGGCAGGTTTAG+AGG | - | chr3_3:1944444-1944463 | Msa0437940:intron | 65.0% | |
| GGAGGCAGGTTTAGAGGCCG+TGG | - | chr3_3:1944450-1944469 | Msa0437940:intron | 65.0% | |
| GGCAGGTTTAGAGGCCGTGG+TGG | - | chr3_3:1944453-1944472 | Msa0437940:intron | 65.0% | |
| ! | CTGCACCTCAGGAGGAGCAC+TGG | - | chr3_3:1947642-1947661 | Msa0437940:intron | 65.0% |
| GCTGGCTAGGCGCCCTTTAC+AGG | - | chr3_3:1949968-1949987 | Msa0437940:intron | 65.0% | |
| GCGTTGCAACCCTCCGTCGC+TGG | - | chr3_3:1938628-1938647 | Msa0437940:three_prime_UTR | 70.0% | |
| AGAGGTCGTGGTGGCCGTGG+AGG | - | chr3_3:1944432-1944451 | Msa0437940:intron | 70.0% | |
| !! | GGCCGTGGTGGCCGTTTTGC+TGG | - | chr3_3:1944465-1944484 | Msa0437940:intron | 70.0% |
| GTCGTGGTGGCCGTGGAGGC+AGG | - | chr3_3:1944436-1944455 | Msa0437940:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 1938543 | 1950753 | 1938543 | ID=Msa0437940;Name=Msa0437940 |
| chr3_3 | mRNA | 1938543 | 1950753 | 1938543 | ID=Msa0437940-mRNA-1;Parent=Msa0437940;Name=Msa0437940-mRNA-1;_AED=0.19;_eAED=0.20;_QI=0|0.91|0.84|1|0.91|0.92|13|297|488 |
| chr3_3 | exon | 1938543 | 1938983 | 1938543 | ID=Msa0437940-mRNA-1:exon:416;Parent=Msa0437940-mRNA-1 |
| chr3_3 | exon | 1939223 | 1939371 | 1939223 | ID=Msa0437940-mRNA-1:exon:415;Parent=Msa0437940-mRNA-1 |
| chr3_3 | exon | 1939519 | 1939607 | 1939519 | ID=Msa0437940-mRNA-1:exon:414;Parent=Msa0437940-mRNA-1 |
| chr3_3 | exon | 1940227 | 1940360 | 1940227 | ID=Msa0437940-mRNA-1:exon:413;Parent=Msa0437940-mRNA-1 |
| chr3_3 | exon | 1940507 | 1940590 | 1940507 | ID=Msa0437940-mRNA-1:exon:412;Parent=Msa0437940-mRNA-1 |
| chr3_3 | exon | 1946591 | 1946626 | 1946591 | ID=Msa0437940-mRNA-1:exon:411;Parent=Msa0437940-mRNA-1 |
| chr3_3 | exon | 1947148 | 1947228 | 1947148 | ID=Msa0437940-mRNA-1:exon:410;Parent=Msa0437940-mRNA-1 |
| chr3_3 | exon | 1947304 | 1947344 | 1947304 | ID=Msa0437940-mRNA-1:exon:409;Parent=Msa0437940-mRNA-1 |
| chr3_3 | exon | 1948903 | 1948972 | 1948903 | ID=Msa0437940-mRNA-1:exon:408;Parent=Msa0437940-mRNA-1 |
| chr3_3 | exon | 1949837 | 1949944 | 1949837 | ID=Msa0437940-mRNA-1:exon:407;Parent=Msa0437940-mRNA-1 |
| chr3_3 | exon | 1950050 | 1950145 | 1950050 | ID=Msa0437940-mRNA-1:exon:406;Parent=Msa0437940-mRNA-1 |
| chr3_3 | exon | 1950237 | 1950347 | 1950237 | ID=Msa0437940-mRNA-1:exon:405;Parent=Msa0437940-mRNA-1 |
| chr3_3 | exon | 1950430 | 1950753 | 1950430 | ID=Msa0437940-mRNA-1:exon:404;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1950430 | 1950753 | 1950430 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1950237 | 1950347 | 1950237 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1950050 | 1950145 | 1950050 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1949837 | 1949944 | 1949837 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1948903 | 1948972 | 1948903 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1947304 | 1947344 | 1947304 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1947148 | 1947228 | 1947148 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1946591 | 1946626 | 1946591 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1940507 | 1940590 | 1940507 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1940227 | 1940360 | 1940227 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1939519 | 1939607 | 1939519 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1939223 | 1939371 | 1939223 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | CDS | 1938840 | 1938983 | 1938840 | ID=Msa0437940-mRNA-1:cds;Parent=Msa0437940-mRNA-1 |
| chr3_3 | three_prime_UTR | 1938543 | 1938839 | 1938543 | ID=Msa0437940-mRNA-1:three_prime_utr;Parent=Msa0437940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
