Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443220 | XP_003598417.1 | 97.800 | 500 | 11 | 0 | 1 | 500 | 1 | 500 | 0.0 | 1014 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443220 | sp|Q8L518|CK2_ARATH | 68.529 | 340 | 107 | 0 | 115 | 454 | 7 | 346 | 3.18e-179 | 509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443220 | G7IVT5 | 97.800 | 500 | 11 | 0 | 1 | 500 | 1 | 500 | 0.0 | 1014 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0443220 | Msa0704730 | 0.814972 | 1.173124e-51 | -8.615850e-47 |
| Msa0307470 | Msa0443220 | 0.819230 | 1.295269e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443220 | MtrunA17_Chr3g0081621 | 97.800 | 500 | 11 | 0 | 1 | 500 | 1 | 500 | 0.0 | 1014 |
| Msa0443220 | MtrunA17_Chr8g0354091 | 72.981 | 359 | 87 | 2 | 113 | 468 | 19 | 370 | 0.0 | 541 |
| Msa0443220 | MtrunA17_Chr1g0201341 | 64.463 | 363 | 127 | 2 | 113 | 473 | 2 | 364 | 3.18e-176 | 499 |
| Msa0443220 | MtrunA17_Chr6g0466631 | 66.667 | 327 | 108 | 1 | 128 | 453 | 17 | 343 | 1.12e-168 | 479 |
| Msa0443220 | MtrunA17_Chr2g0307011 | 35.312 | 320 | 192 | 5 | 140 | 453 | 56 | 366 | 3.80e-55 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443220 | AT1G74320.1 | 68.529 | 340 | 107 | 0 | 115 | 454 | 7 | 346 | 3.24e-180 | 509 |
| Msa0443220 | AT4G09760.1 | 63.030 | 330 | 119 | 3 | 126 | 453 | 14 | 342 | 6.24e-158 | 452 |
| Msa0443220 | AT4G09760.2 | 63.030 | 330 | 119 | 3 | 126 | 453 | 14 | 342 | 6.24e-158 | 452 |
| Msa0443220 | AT1G71697.1 | 62.310 | 329 | 122 | 2 | 126 | 452 | 16 | 344 | 2.96e-156 | 448 |
| Msa0443220 | AT4G09760.3 | 58.294 | 211 | 85 | 3 | 126 | 334 | 14 | 223 | 5.23e-85 | 263 |
| Msa0443220 | AT4G09760.4 | 56.633 | 196 | 82 | 3 | 126 | 319 | 14 | 208 | 3.95e-75 | 236 |
| Msa0443220 | AT2G26830.1 | 36.254 | 331 | 192 | 6 | 131 | 453 | 45 | 364 | 1.04e-59 | 201 |
Find 127 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTCTGTACCTGGAATTT+TGG | 0.087534 | 3_3:+13858406 | Msa0443220:five_prime_UTR |
| CGACAAGGAAATCTCTATTT+TGG | 0.136724 | 3_3:+13859699 | Msa0443220:CDS |
| CCACCTGCTTGATTGCTTAT+AGG | 0.171347 | 3_3:-13858524 | None:intergenic |
| CGGTCAGCTTTGCTGCTTAC+AGG | 0.183900 | 3_3:-13858788 | None:intergenic |
| CAGGAAGATGAAGAGAGTTT+TGG | 0.228691 | 3_3:+13862692 | Msa0443220:CDS |
| ACTAAACAAGTACTATATTT+TGG | 0.229990 | 3_3:+13862791 | Msa0443220:three_prime_UTR |
| ATCATGGAACTCCTTCATTT+TGG | 0.238394 | 3_3:-13859442 | None:intergenic |
| TGATATCATTAGCAGGTAAA+TGG | 0.242873 | 3_3:+13858837 | Msa0443220:CDS |
| TGCCACAATGATTTGCAATA+TGG | 0.280053 | 3_3:+13859760 | Msa0443220:CDS |
| GGTACTGAAGTTACAGATAA+AGG | 0.285206 | 3_3:+13858366 | Msa0443220:intron |
| ACCAGAGTTCTTCGATCCTT+TGG | 0.330585 | 3_3:-13862664 | None:intergenic |
| GTACCCTCAGGGTTATTAAA+AGG | 0.333817 | 3_3:-13862499 | None:intergenic |
| ACTAGATGCAAATGCGTTAC+AGG | 0.349443 | 3_3:+13858868 | Msa0443220:CDS |
| CAAAGAGAAACTCACTATTA+TGG | 0.357350 | 3_3:-13859818 | None:intergenic |
| AGAATCTCCTTTGCTTCTGC+TGG | 0.358458 | 3_3:-13858815 | None:intergenic |
| CACTATTATGGTCACAGAAT+TGG | 0.362127 | 3_3:-13859806 | None:intergenic |
| GTAGGAGTCGCCTGGTTTGC+AGG | 0.365174 | 3_3:-13858491 | None:intergenic |
| GGGCCTTTGGGGAATAATTT+CGG | 0.370418 | 3_3:+13861452 | Msa0443220:CDS |
| AGGAGCGTGAAAGATTTGTT+AGG | 0.370918 | 3_3:+13861075 | Msa0443220:CDS |
| CCACCTAAAGTGTCATTTAC+GGG | 0.371609 | 3_3:-13858599 | None:intergenic |
| ACAGAGGTTTCAAGAGTATT+GGG | 0.371611 | 3_3:+13862438 | Msa0443220:CDS |
| GTGAAAAGAAAGCCAATCTT+TGG | 0.373883 | 3_3:+13859478 | Msa0443220:CDS |
| CCTCACGAAAGGTTCTTGTT+AGG | 0.384064 | 3_3:+13858960 | Msa0443220:CDS |
| CGAAGAACTCTGGTATCTTC+AGG | 0.394810 | 3_3:+13862673 | Msa0443220:CDS |
| ACAGGGGTTTCAATGGCATC+TGG | 0.397243 | 3_3:-13858770 | None:intergenic |
| AACAGAGGTTTCAAGAGTAT+TGG | 0.403796 | 3_3:+13862437 | Msa0443220:CDS |
| GGCCGCTATAAGAGCAGAAA+TGG | 0.419826 | 3_3:-13859421 | None:intergenic |
| AAGGTTCTTGTTAGGATCTA+CGG | 0.422916 | 3_3:+13858968 | Msa0443220:CDS |
| ACCACCTAAAGTGTCATTTA+CGG | 0.432131 | 3_3:-13858600 | None:intergenic |
| CACCAGGCATATCTAGATCA+TGG | 0.437311 | 3_3:-13859458 | None:intergenic |
| ACTTCTCAACTTCTTGTAGT+AGG | 0.438883 | 3_3:-13861404 | None:intergenic |
| CAGTAAATCATTTCTGTACC+TGG | 0.440560 | 3_3:+13858398 | Msa0443220:five_prime_UTR |
| GCATCAGAGCTTAGAAGATA+AGG | 0.442159 | 3_3:-13862469 | None:intergenic |
| GTACTGAAGTTACAGATAAA+GGG | 0.447759 | 3_3:+13858367 | Msa0443220:five_prime_UTR |
| GCTGCTTACAGGGGTTTCAA+TGG | 0.448428 | 3_3:-13858777 | None:intergenic |
| GATATCATTAGCAGGTAAAT+GGG | 0.461907 | 3_3:+13858838 | Msa0443220:CDS |
| GATTCTTCCGCAATGGGTGC+AGG | 0.463434 | 3_3:+13858428 | Msa0443220:exon |
| GGTCAGCTTTGCTGCTTACA+GGG | 0.464141 | 3_3:-13858787 | None:intergenic |
| AGGTTCTTGTTAGGATCTAC+GGG | 0.464881 | 3_3:+13858969 | Msa0443220:CDS |
| CCTCAATGTAGGCCAAAGAT+TGG | 0.466655 | 3_3:-13859490 | None:intergenic |
| TTTAATAACCCTGAGGGTAC+AGG | 0.469258 | 3_3:+13862502 | Msa0443220:CDS |
| GGTCAGGGACCTCGTCTACT+AGG | 0.470717 | 3_3:+13859058 | Msa0443220:CDS |
| GCGGAAGAATCCAAAATTCC+AGG | 0.478773 | 3_3:-13858416 | None:intergenic |
| CACAATTGAATTTGACTACA+AGG | 0.487535 | 3_3:+13862405 | Msa0443220:CDS |
| TTCACCGGCGGCAATATCTC+CGG | 0.490468 | 3_3:+13856848 | Msa0443220:five_prime_UTR |
| TTGCTATAATCAAGAATATG+AGG | 0.491630 | 3_3:-13860953 | None:intergenic |
| GTACATGTCAAAGAATGGTC+AGG | 0.492273 | 3_3:+13859042 | Msa0443220:CDS |
| GAATATGAGGCGTTTCTGTA+TGG | 0.492535 | 3_3:-13860940 | None:intergenic |
| GAGGTTTCCTCAGTTGTAGC+TGG | 0.492695 | 3_3:-13858941 | None:intergenic |
| TAGGATCTACGGGGAGGGTG+TGG | 0.493067 | 3_3:+13858979 | Msa0443220:CDS |
| GCGTCTGCAGCGCATGCCAA+AGG | 0.493926 | 3_3:+13862648 | Msa0443220:CDS |
| AATGATACAGCAGGTGATGA+TGG | 0.495476 | 3_3:+13858671 | Msa0443220:CDS |
| TGCTGAGAATCCTGCAAACC+AGG | 0.496733 | 3_3:+13858481 | Msa0443220:CDS |
| GGAGCGTGAAAGATTTGTTA+GGG | 0.498076 | 3_3:+13861076 | Msa0443220:CDS |
| TGCTCCACTTCACTCTCACT+TGG | 0.498911 | 3_3:-13861381 | None:intergenic |
| TTGATAGGGATGATGAAATA+CGG | 0.500021 | 3_3:+13859011 | Msa0443220:CDS |
| TTTGTCTTCTCCAAAAGAAG+TGG | 0.502871 | 3_3:+13859654 | Msa0443220:CDS |
| TCAGGCTCGCATCAACGGAT+AGG | 0.503411 | 3_3:+13859733 | Msa0443220:CDS |
| AGGGCATATTTGAAGACCTC+AGG | 0.504968 | 3_3:+13861095 | Msa0443220:CDS |
| TTTGCTATATCATATGCTAC+AGG | 0.505115 | 3_3:-13860890 | None:intergenic |
| CTTGATTATAGCAAATATCC+TGG | 0.508261 | 3_3:+13860962 | Msa0443220:CDS |
| ATGAGGTATTTGAAATAAAG+TGG | 0.508683 | 3_3:+13858918 | Msa0443220:CDS |
| AATCAAATACCTGTACCCTC+AGG | 0.510529 | 3_3:-13862511 | None:intergenic |
| CCAATCTTTGGCCTACATTG+AGG | 0.512237 | 3_3:+13859490 | Msa0443220:CDS |
| TCTAAACGCAAAGCGGTGGC+CGG | 0.517001 | 3_3:-13856867 | None:intergenic |
| TCTTATAGCGGCCAAAATGA+AGG | 0.519658 | 3_3:+13859431 | Msa0443220:CDS |
| CAGGCTCGCATCAACGGATA+GGG | 0.520005 | 3_3:+13859734 | Msa0443220:CDS |
| GCCGCTGAATTTATTCGTTG+AGG | 0.522292 | 3_3:+13856893 | Msa0443220:five_prime_UTR |
| TCGCAGCCATCTCACAAAAG+TGG | 0.525991 | 3_3:-13860913 | None:intergenic |
| AACCCCGTAAATGACACTTT+AGG | 0.528458 | 3_3:+13858596 | Msa0443220:CDS |
| TTTGAGTACATGTCAAAGAA+TGG | 0.530571 | 3_3:+13859037 | Msa0443220:CDS |
| AGCTGTCAGGCTCGCATCAA+CGG | 0.536968 | 3_3:+13859728 | Msa0443220:CDS |
| TGAAGAGTTTATACATGCAC+GGG | 0.537689 | 3_3:+13859102 | Msa0443220:CDS |
| TTATGTACATACCTCAATGT+AGG | 0.540731 | 3_3:-13859501 | None:intergenic |
| CTTGTTAGGATCTACGGGGA+GGG | 0.546574 | 3_3:+13858974 | Msa0443220:CDS |
| TCTCCTTTGCTTCTGCTGGA+AGG | 0.547716 | 3_3:-13858811 | None:intergenic |
| GAGATTCTGATATCATTAGC+AGG | 0.548741 | 3_3:+13858830 | Msa0443220:CDS |
| GCAGGTGATGATGGAAAAGA+AGG | 0.548923 | 3_3:+13858680 | Msa0443220:CDS |
| TTACAGGTGATCCCTCTCAA+GGG | 0.554414 | 3_3:+13858884 | Msa0443220:CDS |
| TTGAAGAGTTTATACATGCA+CGG | 0.561716 | 3_3:+13859101 | Msa0443220:CDS |
| TTTCTGTAGTAGGAGTCGCC+TGG | 0.566230 | 3_3:-13858499 | None:intergenic |
| TTCCATGATCTAGATATGCC+TGG | 0.568317 | 3_3:+13859456 | Msa0443220:CDS |
| GCCAAAGGATCGAAGAACTC+TGG | 0.572715 | 3_3:+13862663 | Msa0443220:CDS |
| ATCCATTTCTGCTCTTATAG+CGG | 0.576198 | 3_3:+13859419 | Msa0443220:CDS |
| ATCAAATACCTGTACCCTCA+GGG | 0.578244 | 3_3:-13862510 | None:intergenic |
| CCGCCTTCCAGCAGAAGCAA+AGG | 0.580944 | 3_3:+13858808 | Msa0443220:CDS |
| AGAACCAAGTGAGAGTGAAG+TGG | 0.582495 | 3_3:+13861377 | Msa0443220:CDS |
| CACCTAAAGTGTCATTTACG+GGG | 0.582742 | 3_3:-13858598 | None:intergenic |
| GGTTCTCTTGACAGACGTTG+AGG | 0.584712 | 3_3:+13861055 | Msa0443220:intron |
| AATTCTACAAATGATACAGC+AGG | 0.584713 | 3_3:+13858662 | Msa0443220:CDS |
| ATCTTCTCCTGCACCCATTG+CGG | 0.587678 | 3_3:-13858435 | None:intergenic |
| CCTATAAGCAATCAAGCAGG+TGG | 0.589660 | 3_3:+13858524 | Msa0443220:CDS |
| AAAGTGGCCAGCTACAACTG+AGG | 0.589696 | 3_3:+13858934 | Msa0443220:CDS |
| GTTACAGGTGATCCCTCTCA+AGG | 0.595301 | 3_3:+13858883 | Msa0443220:CDS |
| AATCTCTCTCTCGACTTCAC+CGG | 0.601935 | 3_3:+13856833 | Msa0443220:five_prime_UTR |
| GTCAGCTTTGCTGCTTACAG+GGG | 0.606553 | 3_3:-13858786 | None:intergenic |
| TCAGGGTTATTAAAAGGAGA+AGG | 0.608507 | 3_3:-13862493 | None:intergenic |
| TATAAGCAATCAAGCAGGTG+GGG | 0.609550 | 3_3:+13858526 | Msa0443220:CDS |
| TACCATATTGCAAATCATTG+TGG | 0.610437 | 3_3:-13859762 | None:intergenic |
| AGGTCGAAAAGCTAAATCAA+AGG | 0.611160 | 3_3:+13862729 | Msa0443220:exon |
| CGAGTCTAAACGCAAAGCGG+TGG | 0.611490 | 3_3:-13856871 | None:intergenic |
| CTTCAGAAATTGGCTTAGTG+AGG | 0.612289 | 3_3:+13859624 | Msa0443220:intron |
| TACATGTCAAAGAATGGTCA+GGG | 0.612766 | 3_3:+13859043 | Msa0443220:CDS |
| AACTGAGGAAACCTCACGAA+AGG | 0.614934 | 3_3:+13858949 | Msa0443220:CDS |
| CCTTTGCTTCTGCTGGAAGG+CGG | 0.617396 | 3_3:-13858808 | None:intergenic |
| TTATTTGGACACGGTCGACA+AGG | 0.618896 | 3_3:+13859684 | Msa0443220:CDS |
| GTTGCAAAAGACCAAGCAGT+TGG | 0.619982 | 3_3:+13858566 | Msa0443220:CDS |
| AATCCTATAAGCAATCAAGC+AGG | 0.622217 | 3_3:+13858521 | Msa0443220:CDS |
| GCTATAAGAGCAGAAATGGA+TGG | 0.622251 | 3_3:-13859417 | None:intergenic |
| TACAGGTGATCCCTCTCAAG+GGG | 0.630983 | 3_3:+13858885 | Msa0443220:CDS |
| CTATAAGCAATCAAGCAGGT+GGG | 0.632457 | 3_3:+13858525 | Msa0443220:CDS |
| GGTGCTATGAAAGACAAAGC+AGG | 0.639091 | 3_3:+13858701 | Msa0443220:CDS |
| CCCGTAAATGACACTTTAGG+TGG | 0.644090 | 3_3:+13858599 | Msa0443220:CDS |
| CCTAACAAGAACCTTTCGTG+AGG | 0.644921 | 3_3:-13858960 | None:intergenic |
| CTCTCTCTCGACTTCACCGG+CGG | 0.645016 | 3_3:+13856836 | Msa0443220:five_prime_UTR |
| TCTTGTTAGGATCTACGGGG+AGG | 0.648442 | 3_3:+13858973 | Msa0443220:CDS |
| GGTTTCAAGAGTATTGGGCA+AGG | 0.650192 | 3_3:+13862443 | Msa0443220:CDS |
| GTGGCCGGAGATATTGCCGC+CGG | 0.651449 | 3_3:-13856852 | None:intergenic |
| ATCATTAGCAGGTAAATGGG+AGG | 0.658690 | 3_3:+13858841 | Msa0443220:CDS |
| ATACCGAAATTATTCCCCAA+AGG | 0.681258 | 3_3:-13861455 | None:intergenic |
| ACCTCAACGAATAAATTCAG+CGG | 0.683236 | 3_3:-13856894 | None:intergenic |
| GCAGGTGAAGATGACAAACA+AGG | 0.687986 | 3_3:+13858719 | Msa0443220:CDS |
| CGGCGAGTCTAAACGCAAAG+CGG | 0.690841 | 3_3:-13856874 | None:intergenic |
| ACAAGGAGTATGCGAAACAG+AGG | 0.696997 | 3_3:+13862422 | Msa0443220:CDS |
| GTAAAACGTCCTAGTAGACG+AGG | 0.707228 | 3_3:-13859067 | None:intergenic |
| ACAGGTGATCCCTCTCAAGG+GGG | 0.737784 | 3_3:+13858886 | Msa0443220:CDS |
| GGTTCTTGTTAGGATCTACG+GGG | 0.808372 | 3_3:+13858970 | Msa0443220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTATTATATGTTGT+TGG | + | chr3_3:13857158-13857177 | Msa0443220:intron | 10.0% |
| !!! | ATATTTAATTTAATTTTCGT+TGG | + | chr3_3:13859898-13859917 | Msa0443220:intron | 10.0% |
| !! | TTTGTAAAAAAAATGAAAAA+AGG | + | chr3_3:13860241-13860260 | Msa0443220:intron | 10.0% |
| !! | TTGTAAAAAAAATGAAAAAA+GGG | + | chr3_3:13860242-13860261 | Msa0443220:intron | 10.0% |
| !!! | TATTTTTTACTTTTAAAACA+GGG | - | chr3_3:13860347-13860366 | None:intergenic | 10.0% |
| !!! | TTATTTTTTACTTTTAAAAC+AGG | - | chr3_3:13860348-13860367 | None:intergenic | 10.0% |
| !!! | ATATATAAATTATTGTTTTC+AGG | + | chr3_3:13862618-13862637 | Msa0443220:intron | 10.0% |
| !!! | TCATTTTCTGAAATTATTAA+CGG | - | chr3_3:13857269-13857288 | None:intergenic | 15.0% |
| !!! | GATTTTTAACATCATTTAAA+AGG | + | chr3_3:13857475-13857494 | Msa0443220:intron | 15.0% |
| !!! | ATAAACACAACAATTTTTAT+AGG | - | chr3_3:13858010-13858029 | None:intergenic | 15.0% |
| !!! | TTTATAATGCATCAATTTTA+TGG | - | chr3_3:13859221-13859240 | None:intergenic | 15.0% |
| !!! | ATTTTTTTGACAAAACAAAA+GGG | - | chr3_3:13860089-13860108 | None:intergenic | 15.0% |
| !!! | AATTTTTTTGACAAAACAAA+AGG | - | chr3_3:13860090-13860109 | None:intergenic | 15.0% |
| !!! | TTTTAAAATTGTGTACATAT+TGG | + | chr3_3:13860634-13860653 | Msa0443220:intron | 15.0% |
| !!! | TTTAAAATTGTGTACATATT+GGG | + | chr3_3:13860635-13860654 | Msa0443220:intron | 15.0% |
| !! | GTTGCAAAAATAAAAATAAA+AGG | - | chr3_3:13861698-13861717 | None:intergenic | 15.0% |
| !!! | AAGTTTCTAGAAAATTATTT+TGG | + | chr3_3:13862063-13862082 | Msa0443220:intron | 15.0% |
| !!! | AGTTTCTAGAAAATTATTTT+GGG | + | chr3_3:13862064-13862083 | Msa0443220:intron | 15.0% |
| !!! | CTTTTGTAATTTTAAATGTT+TGG | + | chr3_3:13862292-13862311 | Msa0443220:intron | 15.0% |
| !!! | ATGGATAATATTTGAGATTA+TGG | + | chr3_3:13857096-13857115 | Msa0443220:intron | 20.0% |
| !!! | TTATTTTCAAATGAAGTTGA+TGG | + | chr3_3:13857573-13857592 | Msa0443220:intron | 20.0% |
| !!! | TATTTTCAAATGAAGTTGAT+GGG | + | chr3_3:13857574-13857593 | Msa0443220:intron | 20.0% |
| !!! | TATTTTTATTCACAAGTACT+TGG | - | chr3_3:13857814-13857833 | None:intergenic | 20.0% |
| !! | TATATTATTGAACTTGAAAG+AGG | + | chr3_3:13858033-13858052 | Msa0443220:intron | 20.0% |
| !! | ATATTATTGAACTTGAAAGA+GGG | + | chr3_3:13858034-13858053 | Msa0443220:intron | 20.0% |
| !! | ATTATTGTTAAAAAGAAGAC+AGG | - | chr3_3:13858135-13858154 | None:intergenic | 20.0% |
| !! | TAAAAGAATTAGTTGGTTAA+TGG | - | chr3_3:13858242-13858261 | None:intergenic | 20.0% |
| !! | GAAATCATAAAAGAATTAGT+TGG | - | chr3_3:13858249-13858268 | None:intergenic | 20.0% |
| !!! | TGTATCATTTGTAGAATTTT+CGG | - | chr3_3:13858660-13858679 | None:intergenic | 20.0% |
| !!! | ATTATATAATTAGTCTGCAA+AGG | - | chr3_3:13859880-13859899 | None:intergenic | 20.0% |
| !!! | AACATTTTTGTCAGTAAAAA+GGG | - | chr3_3:13860063-13860082 | None:intergenic | 20.0% |
| !!! | TAACATTTTTGTCAGTAAAA+AGG | - | chr3_3:13860064-13860083 | None:intergenic | 20.0% |
| !! | AAAAAAATTGTCAACGAAAA+AGG | - | chr3_3:13860119-13860138 | None:intergenic | 20.0% |
| !!! | GAATGATGATTCTTTATTTT+TGG | - | chr3_3:13860475-13860494 | None:intergenic | 20.0% |
| !! | AATAAACCTATCTGTATTTA+TGG | + | chr3_3:13860498-13860517 | Msa0443220:intron | 20.0% |
| !! | TCAATGAACAAATAAAACAA+AGG | - | chr3_3:13860726-13860745 | None:intergenic | 20.0% |
| !! | ACATTAAATCGTAAGATATT+TGG | - | chr3_3:13860832-13860851 | None:intergenic | 20.0% |
| !! | ATTCATGATTATATGAATGA+TGG | - | chr3_3:13861296-13861315 | None:intergenic | 20.0% |
| !!! | AGAAATGTATTTTATCTTGT+TGG | + | chr3_3:13861663-13861682 | Msa0443220:intron | 20.0% |
| !! | CAAAAATAAAAATAAAAGGC+GGG | - | chr3_3:13861694-13861713 | None:intergenic | 20.0% |
| !! | GCAAAAATAAAAATAAAAGG+CGG | - | chr3_3:13861695-13861714 | None:intergenic | 20.0% |
| !!! | AATTTTCTAGAAACTTAGAA+GGG | - | chr3_3:13862059-13862078 | None:intergenic | 20.0% |
| !!! | TAATTTTCTAGAAACTTAGA+AGG | - | chr3_3:13862060-13862079 | None:intergenic | 20.0% |
| !! | AATATGAATTAACCATAAGT+GGG | + | chr3_3:13862229-13862248 | Msa0443220:intron | 20.0% |
| !!! | TTGTAATTTTAAATGTTTGG+CGG | + | chr3_3:13862295-13862314 | Msa0443220:intron | 20.0% |
| !!! | AAATCTCAAGAAAAATGTTT+TGG | - | chr3_3:13862761-13862780 | None:intergenic | 20.0% |
| ! | ATGCTTATGAATTATGATGA+AGG | + | chr3_3:13856975-13856994 | Msa0443220:intron | 25.0% |
| !!! | ATTTTCAAATGAAGTTGATG+GGG | + | chr3_3:13857575-13857594 | Msa0443220:intron | 25.0% |
| !!! | AATGAGCTATGTTAGTTTTT+GGG | - | chr3_3:13857964-13857983 | None:intergenic | 25.0% |
| !!! | TAATGAGCTATGTTAGTTTT+TGG | - | chr3_3:13857965-13857984 | None:intergenic | 25.0% |
| ! | TATTATTGAACTTGAAAGAG+GGG | + | chr3_3:13858035-13858054 | Msa0443220:intron | 25.0% |
| ! | TTAGAAAATGAATGAGATAG+TGG | + | chr3_3:13858154-13858173 | Msa0443220:intron | 25.0% |
| !! | ATGAGGTATTTGAAATAAAG+TGG | + | chr3_3:13858918-13858937 | Msa0443220:CDS | 25.0% |
| !! | TGTGGAAATTTTCTTTGATA+GGG | + | chr3_3:13858997-13859016 | Msa0443220:CDS | 25.0% |
| ! | ACTAGTATCACTTCAAATTT+AGG | + | chr3_3:13859241-13859260 | Msa0443220:intron | 25.0% |
| ! | TATTTCAATGCTTCAGAAAT+TGG | + | chr3_3:13859614-13859633 | Msa0443220:intron | 25.0% |
| !! | GATAATTATTTCTTCAGAAC+AGG | - | chr3_3:13859925-13859944 | None:intergenic | 25.0% |
| ! | TACAAACAAAATTCTTCCAT+AGG | - | chr3_3:13860227-13860246 | None:intergenic | 25.0% |
| !!! | TTTACTTTTAAAACAGGGTA+AGG | - | chr3_3:13860342-13860361 | None:intergenic | 25.0% |
| !!! | GATTCTTTATTTTTGGACAA+GGG | - | chr3_3:13860468-13860487 | None:intergenic | 25.0% |
| !!! | TGATTCTTTATTTTTGGACA+AGG | - | chr3_3:13860469-13860488 | None:intergenic | 25.0% |
| ! | ATGAACAAATAAAACAAAGG+AGG | - | chr3_3:13860723-13860742 | None:intergenic | 25.0% |
| !!! | GTTTTATTTGTTCATTGACA+TGG | + | chr3_3:13860728-13860747 | Msa0443220:intron | 25.0% |
| ! | TGGCAAAAAAAAAATAACGA+AGG | - | chr3_3:13860812-13860831 | None:intergenic | 25.0% |
| ! | TTTAATGTTATGTCTGTAAC+AGG | + | chr3_3:13860844-13860863 | Msa0443220:intron | 25.0% |
| ! | TTGCTATAATCAAGAATATG+AGG | - | chr3_3:13860956-13860975 | None:intergenic | 25.0% |
| ! | ATGTGAAAATAATTAGTCAC+AGG | - | chr3_3:13861031-13861050 | None:intergenic | 25.0% |
| !! | TGTGACTAATTATTTTCACA+TGG | + | chr3_3:13861030-13861049 | Msa0443220:intron | 25.0% |
| ! | TTTGTTCCAAATCATGAAAT+AGG | - | chr3_3:13861216-13861235 | None:intergenic | 25.0% |
| !! | TTTGGAACAAAAAAGTTGTA+TGG | + | chr3_3:13861225-13861244 | Msa0443220:intron | 25.0% |
| !! | ATATGAATGATGGAATACAA+GGG | - | chr3_3:13861286-13861305 | None:intergenic | 25.0% |
| !! | TATATGAATGATGGAATACA+AGG | - | chr3_3:13861287-13861306 | None:intergenic | 25.0% |
| ! | ATTATTCTTCTTTGTACTCT+TGG | + | chr3_3:13861506-13861525 | Msa0443220:intron | 25.0% |
| ! | AGTTATTTAACAAACACACT+AGG | + | chr3_3:13861560-13861579 | Msa0443220:intron | 25.0% |
| ! | CATTAAAATACAGAAAACCA+TGG | - | chr3_3:13861844-13861863 | None:intergenic | 25.0% |
| ! | ATGAAAAAGAGTCAAAAATC+AGG | - | chr3_3:13861999-13862018 | None:intergenic | 25.0% |
| !!! | TTTTGAGAATTACAAAGGAT+TGG | + | chr3_3:13862089-13862108 | Msa0443220:intron | 25.0% |
| ! | TTTGAGAATTACAAAGGATT+GGG | + | chr3_3:13862090-13862109 | Msa0443220:intron | 25.0% |
| ! | GAATATGAATTAACCATAAG+TGG | + | chr3_3:13862228-13862247 | Msa0443220:intron | 25.0% |
| ! | TACCTATTATTTCATTTCCA+AGG | - | chr3_3:13862557-13862576 | None:intergenic | 25.0% |
| CAATTGTAACGATGATTGAA+TGG | + | chr3_3:13857077-13857096 | Msa0443220:intron | 30.0% | |
| ! | GATTATGGATTATGATGCTA+AGG | + | chr3_3:13857111-13857130 | Msa0443220:intron | 30.0% |
| AATATAAAGATACACGACAC+CGG | + | chr3_3:13857191-13857210 | Msa0443220:intron | 30.0% | |
| !! | TACAGGGATTTTAATCAATG+CGG | + | chr3_3:13857364-13857383 | Msa0443220:intron | 30.0% |
| ATTTCAATCGTTGATATCAC+CGG | + | chr3_3:13857425-13857444 | Msa0443220:intron | 30.0% | |
| GAGTCTTCAAATTCAATCAT+TGG | + | chr3_3:13857603-13857622 | Msa0443220:intron | 30.0% | |
| GTTTGACAAAAAAATGACCT+AGG | + | chr3_3:13857723-13857742 | Msa0443220:intron | 30.0% | |
| GAAGAACAATAGAAAATCCT+AGG | - | chr3_3:13857743-13857762 | None:intergenic | 30.0% | |
| ATGAAAGGTCTTTGACTAAT+AGG | + | chr3_3:13857910-13857929 | Msa0443220:intron | 30.0% | |
| !!! | ATGAGCTATGTTAGTTTTTG+GGG | - | chr3_3:13857963-13857982 | None:intergenic | 30.0% |
| ATTATTGAACTTGAAAGAGG+GGG | + | chr3_3:13858036-13858055 | Msa0443220:intron | 30.0% | |
| GTACTGAAGTTACAGATAAA+GGG | + | chr3_3:13858367-13858386 | Msa0443220:five_prime_UTR | 30.0% | |
| ! | CTTATAGGATTTTCTGTAGT+AGG | - | chr3_3:13858512-13858531 | None:intergenic | 30.0% |
| AATTCTACAAATGATACAGC+AGG | + | chr3_3:13858662-13858681 | Msa0443220:CDS | 30.0% | |
| TGATATCATTAGCAGGTAAA+TGG | + | chr3_3:13858837-13858856 | Msa0443220:CDS | 30.0% | |
| GATATCATTAGCAGGTAAAT+GGG | + | chr3_3:13858838-13858857 | Msa0443220:CDS | 30.0% | |
| ! | GTGTGGAAATTTTCTTTGAT+AGG | + | chr3_3:13858996-13859015 | Msa0443220:CDS | 30.0% |
| TTGATAGGGATGATGAAATA+CGG | + | chr3_3:13859011-13859030 | Msa0443220:CDS | 30.0% | |
| TTTGAGTACATGTCAAAGAA+TGG | + | chr3_3:13859037-13859056 | Msa0443220:CDS | 30.0% | |
| TTGAAGAGTTTATACATGCA+CGG | + | chr3_3:13859101-13859120 | Msa0443220:CDS | 30.0% | |
| ATAAATTCAGAAGGGAAACA+TGG | - | chr3_3:13859367-13859386 | None:intergenic | 30.0% | |
| TTATGTACATACCTCAATGT+AGG | - | chr3_3:13859504-13859523 | None:intergenic | 30.0% | |
| ! | TAAAAAGCTTCCACTTCTTT+TGG | - | chr3_3:13859667-13859686 | None:intergenic | 30.0% |
| ! | AGAAGTGGAAGCTTTTTATT+TGG | + | chr3_3:13859669-13859688 | Msa0443220:CDS | 30.0% |
| !! | GGAAATCTCTATTTTGGAAA+AGG | + | chr3_3:13859705-13859724 | Msa0443220:CDS | 30.0% |
| TACCATATTGCAAATCATTG+TGG | - | chr3_3:13859765-13859784 | None:intergenic | 30.0% | |
| CAAAGAGAAACTCACTATTA+TGG | - | chr3_3:13859821-13859840 | None:intergenic | 30.0% | |
| ! | TTTTGGTAAAGTTCAGTTGA+AGG | - | chr3_3:13860204-13860223 | None:intergenic | 30.0% |
| ! | CAAAATTCTTCCATAGGTTT+TGG | - | chr3_3:13860221-13860240 | None:intergenic | 30.0% |
| TCAATGTTGTGTAACTCAAA+GGG | - | chr3_3:13860439-13860458 | None:intergenic | 30.0% | |
| ATCAATGTTGTGTAACTCAA+AGG | - | chr3_3:13860440-13860459 | None:intergenic | 30.0% | |
| ! | AACTGATTCACTCAATCATT+TGG | + | chr3_3:13860765-13860784 | Msa0443220:intron | 30.0% |
| ! | TTTGCTATATCATATGCTAC+AGG | - | chr3_3:13860893-13860912 | None:intergenic | 30.0% |
| CTTGATTATAGCAAATATCC+TGG | + | chr3_3:13860962-13860981 | Msa0443220:CDS | 30.0% | |
| ! | ACTAATTATTTTCACATGGC+TGG | + | chr3_3:13861034-13861053 | Msa0443220:intron | 30.0% |
| ACGATGAAAATAATTACCTG+AGG | - | chr3_3:13861114-13861133 | None:intergenic | 30.0% | |
| TGATGACCTATTTCATGATT+TGG | + | chr3_3:13861207-13861226 | Msa0443220:intron | 30.0% | |
| AGTTTCTGTTCCTGATATTA+TGG | + | chr3_3:13861337-13861356 | Msa0443220:intron | 30.0% | |
| GTTTCTGTTCCTGATATTAT+GGG | + | chr3_3:13861338-13861357 | Msa0443220:intron | 30.0% | |
| ATAGTAAATACCCTGATCAT+TGG | - | chr3_3:13861729-13861748 | None:intergenic | 30.0% | |
| !! | ATAAGTGCTGAAGATTCAAT+GGG | - | chr3_3:13861934-13861953 | None:intergenic | 30.0% |
| TTCAGCACTTATCTTTATGT+TGG | + | chr3_3:13861942-13861961 | Msa0443220:intron | 30.0% | |
| TCAGCACTTATCTTTATGTT+GGG | + | chr3_3:13861943-13861962 | Msa0443220:intron | 30.0% | |
| ATATGTTTCCATAGTACTGT+TGG | - | chr3_3:13862024-13862043 | None:intergenic | 30.0% | |
| TTGAGAATTACAAAGGATTG+GGG | + | chr3_3:13862091-13862110 | Msa0443220:intron | 30.0% | |
| GATTATCCAAACAAATTGCT+TGG | + | chr3_3:13862159-13862178 | Msa0443220:intron | 30.0% | |
| ! | AATAGTCCAAGCAATTTGTT+TGG | - | chr3_3:13862168-13862187 | None:intergenic | 30.0% |
| TTACAAAAGAAATTGCATCG+TGG | - | chr3_3:13862281-13862300 | None:intergenic | 30.0% | |
| ! | AAACTACAACCAAGTACTTT+TGG | + | chr3_3:13862318-13862337 | Msa0443220:intron | 30.0% |
| CACAATTGAATTTGACTACA+AGG | + | chr3_3:13862405-13862424 | Msa0443220:CDS | 30.0% | |
| TGCCTTGGAAATGAAATAAT+AGG | + | chr3_3:13862552-13862571 | Msa0443220:intron | 30.0% | |
| ACCTCAACGAATAAATTCAG+CGG | - | chr3_3:13856897-13856916 | None:intergenic | 35.0% | |
| ! | AAACCTCCAATCAAAAGTGT+TGG | + | chr3_3:13857338-13857357 | Msa0443220:intron | 35.0% |
| ! | GTATCACCAACACTTTTGAT+TGG | - | chr3_3:13857347-13857366 | None:intergenic | 35.0% |
| !! | ATCAAAAGTGTTGGTGATAC+AGG | + | chr3_3:13857347-13857366 | Msa0443220:intron | 35.0% |
| !! | TCAAAAGTGTTGGTGATACA+GGG | + | chr3_3:13857348-13857367 | Msa0443220:intron | 35.0% |
| GTGTGTGAAGCTTAAATGAA+AGG | + | chr3_3:13857895-13857914 | Msa0443220:intron | 35.0% | |
| TTATTGAACTTGAAAGAGGG+GGG | + | chr3_3:13858037-13858056 | Msa0443220:intron | 35.0% | |
| !! | TGAATGAGATAGTGGATCAT+TGG | + | chr3_3:13858162-13858181 | Msa0443220:intron | 35.0% |
| TTATCTGTAACTTCAGTACC+TGG | - | chr3_3:13858366-13858385 | None:intergenic | 35.0% | |
| ! | GGTACTGAAGTTACAGATAA+AGG | + | chr3_3:13858366-13858385 | Msa0443220:intron | 35.0% |
| CAGTAAATCATTTCTGTACC+TGG | + | chr3_3:13858398-13858417 | Msa0443220:five_prime_UTR | 35.0% | |
| ! | CATTTCTGTACCTGGAATTT+TGG | + | chr3_3:13858406-13858425 | Msa0443220:five_prime_UTR | 35.0% |
| ! | AATTTTGGATTCTTCCGCAA+TGG | + | chr3_3:13858421-13858440 | Msa0443220:exon | 35.0% |
| ! | ATTTTGGATTCTTCCGCAAT+GGG | + | chr3_3:13858422-13858441 | Msa0443220:exon | 35.0% |
| AATCCTATAAGCAATCAAGC+AGG | + | chr3_3:13858521-13858540 | Msa0443220:CDS | 35.0% | |
| ! | TGGTCTTTTGCAACATTTAC+AGG | - | chr3_3:13858560-13858579 | None:intergenic | 35.0% |
| !! | ACCACCTAAAGTGTCATTTA+CGG | - | chr3_3:13858603-13858622 | None:intergenic | 35.0% |
| GAGATTCTGATATCATTAGC+AGG | + | chr3_3:13858830-13858849 | Msa0443220:CDS | 35.0% | |
| AAGGTTCTTGTTAGGATCTA+CGG | + | chr3_3:13858968-13858987 | Msa0443220:CDS | 35.0% | |
| TACATGTCAAAGAATGGTCA+GGG | + | chr3_3:13859043-13859062 | Msa0443220:CDS | 35.0% | |
| ! | CTACTAGGACGTTTTACAAA+TGG | + | chr3_3:13859073-13859092 | Msa0443220:CDS | 35.0% |
| TGAAGAGTTTATACATGCAC+GGG | + | chr3_3:13859102-13859121 | Msa0443220:CDS | 35.0% | |
| TTATGAACCGTAACACTTCA+GGG | - | chr3_3:13859284-13859303 | None:intergenic | 35.0% | |
| TTTATGAACCGTAACACTTC+AGG | - | chr3_3:13859285-13859304 | None:intergenic | 35.0% | |
| AGCGTCTGATAAATTCAGAA+GGG | - | chr3_3:13859375-13859394 | None:intergenic | 35.0% | |
| ATCCATTTCTGCTCTTATAG+CGG | + | chr3_3:13859419-13859438 | Msa0443220:CDS | 35.0% | |
| ! | ATCATGGAACTCCTTCATTT+TGG | - | chr3_3:13859445-13859464 | None:intergenic | 35.0% |
| GTGAAAAGAAAGCCAATCTT+TGG | + | chr3_3:13859478-13859497 | Msa0443220:CDS | 35.0% | |
| TAGTCTGAGAAATGATGTTG+AGG | - | chr3_3:13859591-13859610 | None:intergenic | 35.0% | |
| !! | TTTTGGAGAAGACAAACGTT+TGG | - | chr3_3:13859650-13859669 | None:intergenic | 35.0% |
| TTTGTCTTCTCCAAAAGAAG+TGG | + | chr3_3:13859654-13859673 | Msa0443220:CDS | 35.0% | |
| !! | GGAAGCTTTTTATTTGGACA+CGG | + | chr3_3:13859675-13859694 | Msa0443220:CDS | 35.0% |
| ! | CGACAAGGAAATCTCTATTT+TGG | + | chr3_3:13859699-13859718 | Msa0443220:CDS | 35.0% |
| ! | TGCCACAATGATTTGCAATA+TGG | + | chr3_3:13859760-13859779 | Msa0443220:CDS | 35.0% |
| CACTATTATGGTCACAGAAT+TGG | - | chr3_3:13859809-13859828 | None:intergenic | 35.0% | |
| CTGAACTTTACCAAAACCTA+TGG | + | chr3_3:13860208-13860227 | Msa0443220:intron | 35.0% | |
| AAAATGAAAAAAGGGCAACC+CGG | + | chr3_3:13860250-13860269 | Msa0443220:intron | 35.0% | |
| AATGCTATGTTTCGACATCA+TGG | + | chr3_3:13860366-13860385 | Msa0443220:intron | 35.0% | |
| !!! | TCTTTATTTTTGGACAAGGG+AGG | - | chr3_3:13860465-13860484 | None:intergenic | 35.0% |
| AACCTATCTGTATTTATGGC+CGG | + | chr3_3:13860502-13860521 | Msa0443220:intron | 35.0% | |
| GATTCACTCAATCATTTGGT+TGG | + | chr3_3:13860769-13860788 | Msa0443220:intron | 35.0% | |
| TCATGAATGACCTTAAGAAC+TGG | + | chr3_3:13861308-13861327 | Msa0443220:intron | 35.0% | |
| AACTAACAGTCCAGTTCTTA+AGG | - | chr3_3:13861321-13861340 | None:intergenic | 35.0% | |
| ACTTCTCAACTTCTTGTAGT+AGG | - | chr3_3:13861407-13861426 | None:intergenic | 35.0% | |
| ! | ACTCGCAAATCATCTTTTCT+GGG | + | chr3_3:13861431-13861450 | Msa0443220:CDS | 35.0% |
| ATACCGAAATTATTCCCCAA+AGG | - | chr3_3:13861458-13861477 | None:intergenic | 35.0% | |
| TTCTTCTTTGTACTCTTGGA+TGG | + | chr3_3:13861510-13861529 | Msa0443220:intron | 35.0% | |
| AAATAACTTCTCCCTTTCCA+AGG | - | chr3_3:13861548-13861567 | None:intergenic | 35.0% | |
| ATAGACTGACAAAAGAGAAG+TGG | + | chr3_3:13861605-13861624 | Msa0443220:intron | 35.0% | |
| AACTGTTCAAACCAATGATC+AGG | + | chr3_3:13861715-13861734 | Msa0443220:intron | 35.0% | |
| ACTGTTCAAACCAATGATCA+GGG | + | chr3_3:13861716-13861735 | Msa0443220:intron | 35.0% | |
| ! | ATCAGGGTATTTACTATTCG+TGG | + | chr3_3:13861732-13861751 | Msa0443220:intron | 35.0% |
| !! | GATAAGTGCTGAAGATTCAA+TGG | - | chr3_3:13861935-13861954 | None:intergenic | 35.0% |
| TCTTTATGTTGGGACATTAG+AGG | + | chr3_3:13861953-13861972 | Msa0443220:intron | 35.0% | |
| AGTCAAAAATCAGGTGAGAA+AGG | - | chr3_3:13861990-13862009 | None:intergenic | 35.0% | |
| TTTCATGACCAACAGTACTA+TGG | + | chr3_3:13862013-13862032 | Msa0443220:intron | 35.0% | |
| AGAAACTTAGAAGGGTAGAA+GGG | - | chr3_3:13862051-13862070 | None:intergenic | 35.0% | |
| TAGAAACTTAGAAGGGTAGA+AGG | - | chr3_3:13862052-13862071 | None:intergenic | 35.0% | |
| !! | GGGCATTTTGAGAATTACAA+AGG | + | chr3_3:13862084-13862103 | Msa0443220:intron | 35.0% |
| !! | TCTTCGAAACCAAAAGTACT+TGG | - | chr3_3:13862330-13862349 | None:intergenic | 35.0% |
| ATCTTCTGATTATCTTGCTC+AGG | + | chr3_3:13862372-13862391 | Msa0443220:intron | 35.0% | |
| TCTTCTGATTATCTTGCTCA+GGG | + | chr3_3:13862373-13862392 | Msa0443220:intron | 35.0% | |
| ! | AACAGAGGTTTCAAGAGTAT+TGG | + | chr3_3:13862437-13862456 | Msa0443220:CDS | 35.0% |
| !! | ACAGAGGTTTCAAGAGTATT+GGG | + | chr3_3:13862438-13862457 | Msa0443220:CDS | 35.0% |
| TCAGGGTTATTAAAAGGAGA+AGG | - | chr3_3:13862496-13862515 | None:intergenic | 35.0% | |
| ! | TTCTCCTTTTAATAACCCTG+AGG | + | chr3_3:13862495-13862514 | Msa0443220:CDS | 35.0% |
| ! | TCTCCTTTTAATAACCCTGA+GGG | + | chr3_3:13862496-13862515 | Msa0443220:CDS | 35.0% |
| !! | GTTGTTTTGTTATACTGCCT+TGG | + | chr3_3:13862537-13862556 | Msa0443220:intron | 35.0% |
| GTAGTCACACACAAAAATGT+TGG | + | chr3_3:13862574-13862593 | Msa0443220:intron | 35.0% | |
| ! | AGGAAGATGAAGAGAGTTTT+GGG | + | chr3_3:13862693-13862712 | Msa0443220:CDS | 35.0% |
| AGGTCGAAAAGCTAAATCAA+AGG | + | chr3_3:13862729-13862748 | Msa0443220:exon | 35.0% | |
| !! | TCACCAACACTTTTGATTGG+AGG | - | chr3_3:13857344-13857363 | None:intergenic | 40.0% |
| !! | GGATTTTAATCAATGCGGTG+CGG | + | chr3_3:13857369-13857388 | Msa0443220:intron | 40.0% |
| !!! | AGGAGCAAGGTTTTAAGTTG+TGG | + | chr3_3:13857392-13857411 | Msa0443220:intron | 40.0% |
| CTGCAATTCATCAACGAAAC+CGG | - | chr3_3:13857447-13857466 | None:intergenic | 40.0% | |
| TTCACAAGTACTTGGCACAT+CGG | - | chr3_3:13857806-13857825 | None:intergenic | 40.0% | |
| TTTGAACCCTCGTGATTATG+TGG | - | chr3_3:13857940-13857959 | None:intergenic | 40.0% | |
| GAGCGTCTATTGTACAGTTT+AGG | + | chr3_3:13858109-13858128 | Msa0443220:intron | 40.0% | |
| GAATTAGTTGGTTAATGGCG+AGG | - | chr3_3:13858237-13858256 | None:intergenic | 40.0% | |
| TATGATTTCTACCCCTTCCT+TGG | + | chr3_3:13858260-13858279 | Msa0443220:intron | 40.0% | |
| CTATAAGCAATCAAGCAGGT+GGG | + | chr3_3:13858525-13858544 | Msa0443220:CDS | 40.0% | |
| TATAAGCAATCAAGCAGGTG+GGG | + | chr3_3:13858526-13858545 | Msa0443220:CDS | 40.0% | |
| AACCCCGTAAATGACACTTT+AGG | + | chr3_3:13858596-13858615 | Msa0443220:CDS | 40.0% | |
| !! | CACCTAAAGTGTCATTTACG+GGG | - | chr3_3:13858601-13858620 | None:intergenic | 40.0% |
| !! | CCACCTAAAGTGTCATTTAC+GGG | - | chr3_3:13858602-13858621 | None:intergenic | 40.0% |
| AATGATACAGCAGGTGATGA+TGG | + | chr3_3:13858671-13858690 | Msa0443220:CDS | 40.0% | |
| ATCATTAGCAGGTAAATGGG+AGG | + | chr3_3:13858841-13858860 | Msa0443220:CDS | 40.0% | |
| ACTAGATGCAAATGCGTTAC+AGG | + | chr3_3:13858868-13858887 | Msa0443220:CDS | 40.0% | |
| AGGTTCTTGTTAGGATCTAC+GGG | + | chr3_3:13858969-13858988 | Msa0443220:CDS | 40.0% | |
| GTACATGTCAAAGAATGGTC+AGG | + | chr3_3:13859042-13859061 | Msa0443220:CDS | 40.0% | |
| ! | TTGTTCACCCTGAAGTGTTA+CGG | + | chr3_3:13859274-13859293 | Msa0443220:intron | 40.0% |
| GCACATCGAGTTCATAAGTT+TGG | - | chr3_3:13859335-13859354 | None:intergenic | 40.0% | |
| CAGCGTCTGATAAATTCAGA+AGG | - | chr3_3:13859376-13859395 | None:intergenic | 40.0% | |
| GCTATAAGAGCAGAAATGGA+TGG | - | chr3_3:13859420-13859439 | None:intergenic | 40.0% | |
| TCTTATAGCGGCCAAAATGA+AGG | + | chr3_3:13859431-13859450 | Msa0443220:CDS | 40.0% | |
| TTCCATGATCTAGATATGCC+TGG | + | chr3_3:13859456-13859475 | Msa0443220:CDS | 40.0% | |
| !!! | AGATTGGCTTTCTTTTCACC+AGG | - | chr3_3:13859477-13859496 | None:intergenic | 40.0% |
| ! | CTTCAGAAATTGGCTTAGTG+AGG | + | chr3_3:13859624-13859643 | Msa0443220:intron | 40.0% |
| !! | ATTTTGGAAAAGGAGCTGTC+AGG | + | chr3_3:13859715-13859734 | Msa0443220:CDS | 40.0% |
| TGGTAAAGTTCAGTTGAAGG+AGG | - | chr3_3:13860201-13860220 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr3_3:13860316-13860335 | None:intergenic | 40.0% | |
| TTGTGTAACTCAAAGGGAAG+GGG | - | chr3_3:13860433-13860452 | None:intergenic | 40.0% | |
| GTTGTGTAACTCAAAGGGAA+GGG | - | chr3_3:13860434-13860453 | None:intergenic | 40.0% | |
| TGTTGTGTAACTCAAAGGGA+AGG | - | chr3_3:13860435-13860454 | None:intergenic | 40.0% | |
| ATCCGGCCATAAATACAGAT+AGG | - | chr3_3:13860507-13860526 | None:intergenic | 40.0% | |
| CCCACATTCAAAATGCTATC+CGG | - | chr3_3:13860524-13860543 | None:intergenic | 40.0% | |
| ! | CCGGATAGCATTTTGAATGT+GGG | + | chr3_3:13860521-13860540 | Msa0443220:intron | 40.0% |
| ! | CGGATAGCATTTTGAATGTG+GGG | + | chr3_3:13860522-13860541 | Msa0443220:intron | 40.0% |
| GTAGATGATTCTCAGCAAGA+AGG | - | chr3_3:13860598-13860617 | None:intergenic | 40.0% | |
| TGTGTACATATTGGGAGTCA+AGG | + | chr3_3:13860643-13860662 | Msa0443220:intron | 40.0% | |
| !! | AGCAAACCACTTTTGTGAGA+TGG | + | chr3_3:13860907-13860926 | Msa0443220:CDS | 40.0% |
| ! | GAATATGAGGCGTTTCTGTA+TGG | - | chr3_3:13860943-13860962 | None:intergenic | 40.0% |
| AATATCCTGGTATGAACCTG+TGG | + | chr3_3:13860975-13860994 | Msa0443220:intron | 40.0% | |
| ! | AGGAGCGTGAAAGATTTGTT+AGG | + | chr3_3:13861075-13861094 | Msa0443220:CDS | 40.0% |
| !! | GGAGCGTGAAAGATTTGTTA+GGG | + | chr3_3:13861076-13861095 | Msa0443220:CDS | 40.0% |
| CGTTCAAGTCCCATAATATC+AGG | - | chr3_3:13861350-13861369 | None:intergenic | 40.0% | |
| ATATTATGGGACTTGAACGC+AGG | + | chr3_3:13861351-13861370 | Msa0443220:intron | 40.0% | |
| ! | CACTCGCAAATCATCTTTTC+TGG | + | chr3_3:13861430-13861449 | Msa0443220:CDS | 40.0% |
| ! | CTCGCAAATCATCTTTTCTG+GGG | + | chr3_3:13861432-13861451 | Msa0443220:CDS | 40.0% |
| CTTTGTACTCTTGGATGGTT+TGG | + | chr3_3:13861515-13861534 | Msa0443220:intron | 40.0% | |
| ! | ACTAGGTTTTTGTGCACCAA+GGG | + | chr3_3:13861577-13861596 | Msa0443220:intron | 40.0% |
| TGTCAGTCTATCAAAACCCT+TGG | - | chr3_3:13861596-13861615 | None:intergenic | 40.0% | |
| !! | GATGAATAGCTAGCTCTGTA+TGG | - | chr3_3:13861819-13861838 | None:intergenic | 40.0% |
| AGCTAGCTATTCATCAACCA+TGG | + | chr3_3:13861824-13861843 | Msa0443220:intron | 40.0% | |
| TTATCGACCAAGTGTTAGAC+TGG | + | chr3_3:13862131-13862150 | Msa0443220:intron | 40.0% | |
| TCAAAGTCCAGTCTAACACT+TGG | - | chr3_3:13862141-13862160 | None:intergenic | 40.0% | |
| ATTGATGAGAAGCCCACTTA+TGG | - | chr3_3:13862244-13862263 | None:intergenic | 40.0% | |
| GCATCAGAGCTTAGAAGATA+AGG | - | chr3_3:13862472-13862491 | None:intergenic | 40.0% | |
| GTACCCTCAGGGTTATTAAA+AGG | - | chr3_3:13862502-13862521 | None:intergenic | 40.0% | |
| ! | TTTAATAACCCTGAGGGTAC+AGG | + | chr3_3:13862502-13862521 | Msa0443220:CDS | 40.0% |
| ATCAAATACCTGTACCCTCA+GGG | - | chr3_3:13862513-13862532 | None:intergenic | 40.0% | |
| AATCAAATACCTGTACCCTC+AGG | - | chr3_3:13862514-13862533 | None:intergenic | 40.0% | |
| ! | CAGGAAGATGAAGAGAGTTT+TGG | + | chr3_3:13862692-13862711 | Msa0443220:CDS | 40.0% |
| !!! | ATGAAGAGAGTTTTGGGTCT+TGG | + | chr3_3:13862699-13862718 | Msa0443220:CDS | 40.0% |
| AATCTCTCTCTCGACTTCAC+CGG | + | chr3_3:13856833-13856852 | Msa0443220:five_prime_UTR | 45.0% | |
| GCCGCTGAATTTATTCGTTG+AGG | + | chr3_3:13856893-13856912 | Msa0443220:five_prime_UTR | 45.0% | |
| ! | TCATGTCCAGGTGTCATATC+CGG | - | chr3_3:13857213-13857232 | None:intergenic | 45.0% |
| ! | TCTGTGTCATTGTCATGTCC+AGG | - | chr3_3:13857225-13857244 | None:intergenic | 45.0% |
| GGTTTATCTCATATCCGACG+CGG | - | chr3_3:13857323-13857342 | None:intergenic | 45.0% | |
| ! | TTTTAATCAATGCGGTGCGG+AGG | + | chr3_3:13857372-13857391 | Msa0443220:intron | 45.0% |
| AATAGACGCTCCAACAGAGA+CGG | - | chr3_3:13858100-13858119 | None:intergenic | 45.0% | |
| !! | TGAACGATCCTTGCTTTTCC+AGG | + | chr3_3:13858345-13858364 | Msa0443220:intron | 45.0% |
| CTTCAGTACCTGGAAAAGCA+AGG | - | chr3_3:13858356-13858375 | None:intergenic | 45.0% | |
| GCGGAAGAATCCAAAATTCC+AGG | - | chr3_3:13858419-13858438 | None:intergenic | 45.0% | |
| CCACCTGCTTGATTGCTTAT+AGG | - | chr3_3:13858527-13858546 | None:intergenic | 45.0% | |
| CCTATAAGCAATCAAGCAGG+TGG | + | chr3_3:13858524-13858543 | Msa0443220:CDS | 45.0% | |
| GTTGCAAAAGACCAAGCAGT+TGG | + | chr3_3:13858566-13858585 | Msa0443220:CDS | 45.0% | |
| CCCGTAAATGACACTTTAGG+TGG | + | chr3_3:13858599-13858618 | Msa0443220:CDS | 45.0% | |
| !! | GCAGGTGATGATGGAAAAGA+AGG | + | chr3_3:13858680-13858699 | Msa0443220:CDS | 45.0% |
| ! | GGTGCTATGAAAGACAAAGC+AGG | + | chr3_3:13858701-13858720 | Msa0443220:CDS | 45.0% |
| GCAGGTGAAGATGACAAACA+AGG | + | chr3_3:13858719-13858738 | Msa0443220:CDS | 45.0% | |
| AGAATCTCCTTTGCTTCTGC+TGG | - | chr3_3:13858818-13858837 | None:intergenic | 45.0% | |
| TTACAGGTGATCCCTCTCAA+GGG | + | chr3_3:13858884-13858903 | Msa0443220:CDS | 45.0% | |
| AACTGAGGAAACCTCACGAA+AGG | + | chr3_3:13858949-13858968 | Msa0443220:CDS | 45.0% | |
| CCTAACAAGAACCTTTCGTG+AGG | - | chr3_3:13858963-13858982 | None:intergenic | 45.0% | |
| CCTCACGAAAGGTTCTTGTT+AGG | + | chr3_3:13858960-13858979 | Msa0443220:CDS | 45.0% | |
| GGTTCTTGTTAGGATCTACG+GGG | + | chr3_3:13858970-13858989 | Msa0443220:CDS | 45.0% | |
| GTAAAACGTCCTAGTAGACG+AGG | - | chr3_3:13859070-13859089 | None:intergenic | 45.0% | |
| CACCAGGCATATCTAGATCA+TGG | - | chr3_3:13859461-13859480 | None:intergenic | 45.0% | |
| CCTCAATGTAGGCCAAAGAT+TGG | - | chr3_3:13859493-13859512 | None:intergenic | 45.0% | |
| CCAATCTTTGGCCTACATTG+AGG | + | chr3_3:13859490-13859509 | Msa0443220:CDS | 45.0% | |
| TTATTTGGACACGGTCGACA+AGG | + | chr3_3:13859684-13859703 | Msa0443220:CDS | 45.0% | |
| GTTCAGTTGAAGGAGGAAAC+AGG | - | chr3_3:13860194-13860213 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr3_3:13860317-13860336 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr3_3:13860320-13860339 | None:intergenic | 45.0% | |
| TCAAAGGGAAGGGGATTTAC+AGG | - | chr3_3:13860424-13860443 | None:intergenic | 45.0% | |
| ! | GCCGGATAGCATTTTGAATG+TGG | + | chr3_3:13860520-13860539 | Msa0443220:intron | 45.0% |
| GGAAACCAACAACACTCATC+AGG | - | chr3_3:13860577-13860596 | None:intergenic | 45.0% | |
| TGAATGCTTCAGAAAGCCAC+AGG | - | chr3_3:13860994-13861013 | None:intergenic | 45.0% | |
| AGGGCATATTTGAAGACCTC+AGG | + | chr3_3:13861095-13861114 | Msa0443220:CDS | 45.0% | |
| AGAACCAAGTGAGAGTGAAG+TGG | + | chr3_3:13861377-13861396 | Msa0443220:CDS | 45.0% | |
| !!! | ATCATCTTTTCTGGGGCCTT+TGG | + | chr3_3:13861439-13861458 | Msa0443220:CDS | 45.0% |
| !!! | TCATCTTTTCTGGGGCCTTT+GGG | + | chr3_3:13861440-13861459 | Msa0443220:CDS | 45.0% |
| ! | GGGCCTTTGGGGAATAATTT+CGG | + | chr3_3:13861452-13861471 | Msa0443220:CDS | 45.0% |
| !! | TTTGGCTTGAGACCTTGGAA+AGG | + | chr3_3:13861533-13861552 | Msa0443220:intron | 45.0% |
| ! | TTGGCTTGAGACCTTGGAAA+GGG | + | chr3_3:13861534-13861553 | Msa0443220:intron | 45.0% |
| ! | CACTAGGTTTTTGTGCACCA+AGG | + | chr3_3:13861576-13861595 | Msa0443220:intron | 45.0% |
| ACTATTCGTGGCTCGTTTCA+TGG | + | chr3_3:13861744-13861763 | Msa0443220:intron | 45.0% | |
| CTATTCGTGGCTCGTTTCAT+GGG | + | chr3_3:13861745-13861764 | Msa0443220:intron | 45.0% | |
| ! | ACAAGGAGTATGCGAAACAG+AGG | + | chr3_3:13862422-13862441 | Msa0443220:CDS | 45.0% |
| !! | GGTTTCAAGAGTATTGGGCA+AGG | + | chr3_3:13862443-13862462 | Msa0443220:CDS | 45.0% |
| ACCAGAGTTCTTCGATCCTT+TGG | - | chr3_3:13862667-13862686 | None:intergenic | 45.0% | |
| CGAAGAACTCTGGTATCTTC+AGG | + | chr3_3:13862673-13862692 | Msa0443220:CDS | 45.0% | |
| !!! | TTTTGGGTCTTGGCTTGTTC+AGG | + | chr3_3:13862709-13862728 | Msa0443220:CDS | 45.0% |
| !!! | TTCTTTTTTTTTTTTTTTTT+TGG | + | chr3_3:13861153-13861172 | Msa0443220:intron | 5.0% |
| AGGCGTTCCACATAATCACG+AGG | + | chr3_3:13857930-13857949 | Msa0443220:intron | 50.0% | |
| GGCGTTCCACATAATCACGA+GGG | + | chr3_3:13857931-13857950 | Msa0443220:intron | 50.0% | |
| TTGAACTTGAAAGAGGGGGG+AGG | + | chr3_3:13858040-13858059 | Msa0443220:intron | 50.0% | |
| TGAACTTGAAAGAGGGGGGA+GGG | + | chr3_3:13858041-13858060 | Msa0443220:intron | 50.0% | |
| GATACAGGGAGGGAACACAT+GGG | - | chr3_3:13858078-13858097 | None:intergenic | 50.0% | |
| AACAGAGACGGATACAGGGA+GGG | - | chr3_3:13858088-13858107 | None:intergenic | 50.0% | |
| CTCCAACAGAGACGGATACA+GGG | - | chr3_3:13858092-13858111 | None:intergenic | 50.0% | |
| TTCTACCCCTTCCTTGGAGA+AGG | + | chr3_3:13858266-13858285 | Msa0443220:intron | 50.0% | |
| TTCCTCCTTCTCCAAGGAAG+GGG | - | chr3_3:13858274-13858293 | None:intergenic | 50.0% | |
| CTTCCTCCTTCTCCAAGGAA+GGG | - | chr3_3:13858275-13858294 | None:intergenic | 50.0% | |
| TCTTCCTCCTTCTCCAAGGA+AGG | - | chr3_3:13858276-13858295 | None:intergenic | 50.0% | |
| TCCTTGGAGAAGGAGGAAGA+AGG | + | chr3_3:13858276-13858295 | Msa0443220:intron | 50.0% | |
| TCCTTCTTCCTCCTTCTCCA+AGG | - | chr3_3:13858280-13858299 | None:intergenic | 50.0% | |
| ATCTTCTCCTGCACCCATTG+CGG | - | chr3_3:13858438-13858457 | None:intergenic | 50.0% | |
| TGCTGAGAATCCTGCAAACC+AGG | + | chr3_3:13858481-13858500 | Msa0443220:CDS | 50.0% | |
| TTTCTGTAGTAGGAGTCGCC+TGG | - | chr3_3:13858502-13858521 | None:intergenic | 50.0% | |
| ! | GGTTTTCTGCACCAACTGCT+TGG | - | chr3_3:13858580-13858599 | None:intergenic | 50.0% |
| ACAGGGGTTTCAATGGCATC+TGG | - | chr3_3:13858773-13858792 | None:intergenic | 50.0% | |
| GCTGCTTACAGGGGTTTCAA+TGG | - | chr3_3:13858780-13858799 | None:intergenic | 50.0% | |
| ! | GTCAGCTTTGCTGCTTACAG+GGG | - | chr3_3:13858789-13858808 | None:intergenic | 50.0% |
| ! | GGTCAGCTTTGCTGCTTACA+GGG | - | chr3_3:13858790-13858809 | None:intergenic | 50.0% |
| TCTCCTTTGCTTCTGCTGGA+AGG | - | chr3_3:13858814-13858833 | None:intergenic | 50.0% | |
| GTTACAGGTGATCCCTCTCA+AGG | + | chr3_3:13858883-13858902 | Msa0443220:CDS | 50.0% | |
| TACAGGTGATCCCTCTCAAG+GGG | + | chr3_3:13858885-13858904 | Msa0443220:CDS | 50.0% | |
| TTGTCATTGCCCCCTTGAGA+GGG | - | chr3_3:13858898-13858917 | None:intergenic | 50.0% | |
| TTTGTCATTGCCCCCTTGAG+AGG | - | chr3_3:13858899-13858918 | None:intergenic | 50.0% | |
| CAAGGGGGCAATGACAAATG+AGG | + | chr3_3:13858901-13858920 | Msa0443220:CDS | 50.0% | |
| AAAGTGGCCAGCTACAACTG+AGG | + | chr3_3:13858934-13858953 | Msa0443220:CDS | 50.0% | |
| GAGGTTTCCTCAGTTGTAGC+TGG | - | chr3_3:13858944-13858963 | None:intergenic | 50.0% | |
| TCTTGTTAGGATCTACGGGG+AGG | + | chr3_3:13858973-13858992 | Msa0443220:CDS | 50.0% | |
| CTTGTTAGGATCTACGGGGA+GGG | + | chr3_3:13858974-13858993 | Msa0443220:CDS | 50.0% | |
| GGCCGCTATAAGAGCAGAAA+TGG | - | chr3_3:13859424-13859443 | None:intergenic | 50.0% | |
| ! | GACAGCCTGATGAGTGTTGT+TGG | + | chr3_3:13860569-13860588 | Msa0443220:intron | 50.0% |
| TCGCAGCCATCTCACAAAAG+TGG | - | chr3_3:13860916-13860935 | None:intergenic | 50.0% | |
| GAAAGCCACAGGTTCATACC+AGG | - | chr3_3:13860983-13861002 | None:intergenic | 50.0% | |
| GGTTCTCTTGACAGACGTTG+AGG | + | chr3_3:13861055-13861074 | Msa0443220:intron | 50.0% | |
| TGCTCCACTTCACTCTCACT+TGG | - | chr3_3:13861384-13861403 | None:intergenic | 50.0% | |
| !!! | CATCTTTTCTGGGGCCTTTG+GGG | + | chr3_3:13861441-13861460 | Msa0443220:CDS | 50.0% |
| !! | GATGGTTTGGCTTGAGACCT+TGG | + | chr3_3:13861528-13861547 | Msa0443220:intron | 50.0% |
| GCCAAAGGATCGAAGAACTC+TGG | + | chr3_3:13862663-13862682 | Msa0443220:CDS | 50.0% | |
| TTCACCGGCGGCAATATCTC+CGG | + | chr3_3:13856848-13856867 | Msa0443220:five_prime_UTR | 55.0% | |
| TCTAAACGCAAAGCGGTGGC+CGG | - | chr3_3:13856870-13856889 | None:intergenic | 55.0% | |
| CGAGTCTAAACGCAAAGCGG+TGG | - | chr3_3:13856874-13856893 | None:intergenic | 55.0% | |
| CGGCGAGTCTAAACGCAAAG+CGG | - | chr3_3:13856877-13856896 | None:intergenic | 55.0% | |
| ACGACACCGGATATGACACC+TGG | + | chr3_3:13857204-13857223 | Msa0443220:intron | 55.0% | |
| TCTCATATCCGACGCGGACA+CGG | - | chr3_3:13857317-13857336 | None:intergenic | 55.0% | |
| GAACTTGAAAGAGGGGGGAG+GGG | + | chr3_3:13858042-13858061 | Msa0443220:intron | 55.0% | |
| AACTTGAAAGAGGGGGGAGG+GGG | + | chr3_3:13858043-13858062 | Msa0443220:intron | 55.0% | |
| GGATACAGGGAGGGAACACA+TGG | - | chr3_3:13858079-13858098 | None:intergenic | 55.0% | |
| CAACAGAGACGGATACAGGG+AGG | - | chr3_3:13858089-13858108 | None:intergenic | 55.0% | |
| CTCCCTGTATCCGTCTCTGT+TGG | + | chr3_3:13858087-13858106 | Msa0443220:intron | 55.0% | |
| GCTCCAACAGAGACGGATAC+AGG | - | chr3_3:13858093-13858112 | None:intergenic | 55.0% | |
| TACCCCTTCCTTGGAGAAGG+AGG | + | chr3_3:13858269-13858288 | Msa0443220:intron | 55.0% | |
| GATTCTTCCGCAATGGGTGC+AGG | + | chr3_3:13858428-13858447 | Msa0443220:exon | 55.0% | |
| ! | CGGTCAGCTTTGCTGCTTAC+AGG | - | chr3_3:13858791-13858810 | None:intergenic | 55.0% |
| CCTTTGCTTCTGCTGGAAGG+CGG | - | chr3_3:13858811-13858830 | None:intergenic | 55.0% | |
| ACAGGTGATCCCTCTCAAGG+GGG | + | chr3_3:13858886-13858905 | Msa0443220:CDS | 55.0% | |
| AGCTGTCAGGCTCGCATCAA+CGG | + | chr3_3:13859728-13859747 | Msa0443220:CDS | 55.0% | |
| TCAGGCTCGCATCAACGGAT+AGG | + | chr3_3:13859733-13859752 | Msa0443220:CDS | 55.0% | |
| CAGGCTCGCATCAACGGATA+GGG | + | chr3_3:13859734-13859753 | Msa0443220:CDS | 55.0% | |
| CTCTCTCTCGACTTCACCGG+CGG | + | chr3_3:13856836-13856855 | Msa0443220:five_prime_UTR | 60.0% | |
| ATGTGTGTCCGTGTCCGCGT+CGG | + | chr3_3:13857306-13857325 | Msa0443220:intron | 60.0% | |
| ! | GTAGGAGTCGCCTGGTTTGC+AGG | - | chr3_3:13858494-13858513 | None:intergenic | 60.0% |
| CCGCCTTCCAGCAGAAGCAA+AGG | + | chr3_3:13858808-13858827 | Msa0443220:CDS | 60.0% | |
| TAGGATCTACGGGGAGGGTG+TGG | + | chr3_3:13858979-13858998 | Msa0443220:CDS | 60.0% | |
| GGTCAGGGACCTCGTCTACT+AGG | + | chr3_3:13859058-13859077 | Msa0443220:CDS | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr3_3:13860272-13860291 | None:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr3_3:13860276-13860295 | Msa0443220:intron | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr3_3:13860277-13860296 | Msa0443220:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr3_3:13860304-13860323 | None:intergenic | 60.0% |
| GTGGCCGGAGATATTGCCGC+CGG | - | chr3_3:13856855-13856874 | None:intergenic | 65.0% | |
| CAATGCGGTGCGGAGGAGCA+AGG | + | chr3_3:13857379-13857398 | Msa0443220:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr3_3:13860271-13860290 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr3_3:13860288-13860307 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr3_3:13860289-13860308 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr3_3:13860288-13860307 | Msa0443220:intron | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr3_3:13860289-13860308 | Msa0443220:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr3_3:13860302-13860321 | Msa0443220:intron | 65.0% | |
| GCGTCTGCAGCGCATGCCAA+AGG | + | chr3_3:13862648-13862667 | Msa0443220:CDS | 65.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr3_3:13860282-13860301 | Msa0443220:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr3_3:13860283-13860302 | Msa0443220:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr3_3:13860287-13860306 | Msa0443220:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 13856796 | 13862811 | 13856796 | ID=Msa0443220;Name=Msa0443220 |
| chr3_3 | mRNA | 13856796 | 13862811 | 13856796 | ID=Msa0443220-mRNA-1;Parent=Msa0443220;Name=Msa0443220-mRNA-1;_AED=0.04;_eAED=0.04;_QI=192|1|1|1|0.87|0.77|9|68|500 |
| chr3_3 | exon | 13856796 | 13856914 | 13856796 | ID=Msa0443220-mRNA-1:exon:3009;Parent=Msa0443220-mRNA-1 |
| chr3_3 | exon | 13858367 | 13859123 | 13858367 | ID=Msa0443220-mRNA-1:exon:3010;Parent=Msa0443220-mRNA-1 |
| chr3_3 | exon | 13859390 | 13859511 | 13859390 | ID=Msa0443220-mRNA-1:exon:3011;Parent=Msa0443220-mRNA-1 |
| chr3_3 | exon | 13859630 | 13859825 | 13859630 | ID=Msa0443220-mRNA-1:exon:3012;Parent=Msa0443220-mRNA-1 |
| chr3_3 | exon | 13860866 | 13860983 | 13860866 | ID=Msa0443220-mRNA-1:exon:3013;Parent=Msa0443220-mRNA-1 |
| chr3_3 | exon | 13861069 | 13861116 | 13861069 | ID=Msa0443220-mRNA-1:exon:3014;Parent=Msa0443220-mRNA-1 |
| chr3_3 | exon | 13861373 | 13861473 | 13861373 | ID=Msa0443220-mRNA-1:exon:3015;Parent=Msa0443220-mRNA-1 |
| chr3_3 | exon | 13862394 | 13862523 | 13862394 | ID=Msa0443220-mRNA-1:exon:3016;Parent=Msa0443220-mRNA-1 |
| chr3_3 | exon | 13862640 | 13862811 | 13862640 | ID=Msa0443220-mRNA-1:exon:3017;Parent=Msa0443220-mRNA-1 |
| chr3_3 | five_prime_UTR | 13856796 | 13856914 | 13856796 | ID=Msa0443220-mRNA-1:five_prime_utr;Parent=Msa0443220-mRNA-1 |
| chr3_3 | five_prime_UTR | 13858367 | 13858439 | 13858367 | ID=Msa0443220-mRNA-1:five_prime_utr;Parent=Msa0443220-mRNA-1 |
| chr3_3 | CDS | 13858440 | 13859123 | 13858440 | ID=Msa0443220-mRNA-1:cds;Parent=Msa0443220-mRNA-1 |
| chr3_3 | CDS | 13859390 | 13859511 | 13859390 | ID=Msa0443220-mRNA-1:cds;Parent=Msa0443220-mRNA-1 |
| chr3_3 | CDS | 13859630 | 13859825 | 13859630 | ID=Msa0443220-mRNA-1:cds;Parent=Msa0443220-mRNA-1 |
| chr3_3 | CDS | 13860866 | 13860983 | 13860866 | ID=Msa0443220-mRNA-1:cds;Parent=Msa0443220-mRNA-1 |
| chr3_3 | CDS | 13861069 | 13861116 | 13861069 | ID=Msa0443220-mRNA-1:cds;Parent=Msa0443220-mRNA-1 |
| chr3_3 | CDS | 13861373 | 13861473 | 13861373 | ID=Msa0443220-mRNA-1:cds;Parent=Msa0443220-mRNA-1 |
| chr3_3 | CDS | 13862394 | 13862523 | 13862394 | ID=Msa0443220-mRNA-1:cds;Parent=Msa0443220-mRNA-1 |
| chr3_3 | CDS | 13862640 | 13862743 | 13862640 | ID=Msa0443220-mRNA-1:cds;Parent=Msa0443220-mRNA-1 |
| chr3_3 | three_prime_UTR | 13862744 | 13862811 | 13862744 | ID=Msa0443220-mRNA-1:three_prime_utr;Parent=Msa0443220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
