AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0459680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0459680 MtrunA17_Chr3g0107851 99.110 562 4 1 1 562 1 561 0.0 1143
Msa0459680 MtrunA17_Chr1g0176041 45.363 399 202 5 102 491 138 529 5.62e-110 341
Msa0459680 MtrunA17_Chr2g0330401 44.271 384 202 5 93 475 73 445 5.73e-110 337
Msa0459680 MtrunA17_Chr3g0121351 39.800 500 279 7 3 492 39 526 2.45e-108 337
Msa0459680 MtrunA17_Chr7g0270131 41.687 403 220 5 78 478 196 585 1.34e-102 327
Msa0459680 MtrunA17_Chr4g0076491 42.056 428 205 9 83 480 247 661 3.06e-101 321
Msa0459680 MtrunA17_Chr4g0063551 43.103 406 210 5 103 493 125 524 6.95e-101 319
Msa0459680 MtrunA17_Chr6g0449741 40.909 440 217 9 83 494 209 633 1.53e-100 318
Msa0459680 MtrunA17_Chr2g0277821 41.320 409 224 4 84 489 474 869 9.92e-99 323
Msa0459680 MtrunA17_Chr1g0200181 38.614 404 226 4 78 473 109 498 1.11e-96 306
Msa0459680 MtrunA17_Chr1g0157691 38.084 407 224 6 78 473 111 500 1.19e-92 295
Msa0459680 MtrunA17_Chr6g0449911 41.310 397 220 6 97 492 146 530 1.27e-92 299
Msa0459680 MtrunA17_Chr2g0293631 42.172 396 208 9 102 492 482 861 1.69e-90 301
Msa0459680 MtrunA17_Chr4g0058591 42.254 355 187 5 95 445 181 521 6.73e-87 278
Msa0459680 MtrunA17_Chr5g0409981 38.049 410 237 7 115 517 101 500 2.62e-81 264
Msa0459680 MtrunA17_Chr3g0098121 38.070 373 219 5 117 487 151 513 6.29e-77 258
Msa0459680 MtrunA17_Chr2g0300291 37.666 377 216 5 117 487 140 503 1.47e-74 251
Msa0459680 MtrunA17_Chr6g0483491 38.421 380 212 8 116 490 8 370 1.97e-74 243
Msa0459680 MtrunA17_Chr3g0095031 42.773 339 175 7 143 476 115 439 5.86e-74 245
Msa0459680 MtrunA17_Chr5g0442191 40.882 340 188 5 138 475 101 429 2.22e-73 244
Msa0459680 MtrunA17_Chr7g0236841 38.158 380 213 8 116 490 8 370 9.50e-73 239
Msa0459680 MtrunA17_Chr6g0461751 33.898 413 252 7 91 500 118 512 1.22e-70 236
Msa0459680 MtrunA17_Chr8g0342861 35.733 375 219 5 117 487 40 396 1.46e-68 227
Msa0459680 MtrunA17_Chr2g0299681 35.638 376 218 5 117 487 40 396 1.75e-68 227
Msa0459680 MtrunA17_Chr1g0193491 40.828 338 184 6 143 475 139 465 1.84e-68 233
Msa0459680 MtrunA17_Chr7g0271121 38.753 369 203 7 116 475 102 456 7.18e-68 233
Msa0459680 MtrunA17_Chr2g0329931 35.467 375 220 5 117 487 40 396 1.05e-67 225
Msa0459680 MtrunA17_Chr4g0070981 35.467 375 220 5 117 487 40 396 1.60e-67 224
Msa0459680 MtrunA17_Chr2g0310581 35.897 429 242 10 72 489 9 415 2.23e-67 227
Msa0459680 MtrunA17_Chr4g0040761 35.890 365 216 5 119 479 20 370 4.61e-64 224
Msa0459680 MtrunA17_Chr2g0297261 32.888 374 233 6 116 487 32 389 1.43e-62 211
Msa0459680 MtrunA17_Chr7g0247191 32.172 373 235 5 119 490 151 506 7.30e-62 212
Msa0459680 MtrunA17_Chr6g0475251 38.873 355 190 9 143 487 128 465 1.59e-61 215
Msa0459680 MtrunA17_Chr7g0247221 32.172 373 235 5 119 490 144 499 2.51e-61 211
Msa0459680 MtrunA17_Chr7g0247181 32.172 373 235 5 119 490 141 496 3.95e-61 210
Msa0459680 MtrunA17_Chr4g0003441 33.148 359 221 6 119 473 109 452 2.21e-59 205
Msa0459680 MtrunA17_Chr7g0263771 33.420 386 231 11 113 490 124 491 4.30e-59 207
Msa0459680 MtrunA17_Chr6g0466611 31.519 441 257 10 116 526 140 565 1.11e-55 199
Msa0459680 MtrunA17_Chr2g0307471 32.474 388 239 8 110 488 83 456 1.42e-55 196
Msa0459680 MtrunA17_Chr1g0204391 34.903 361 196 8 143 477 69 416 5.29e-54 192
Msa0459680 MtrunA17_Chr1g0149251 33.851 322 194 6 156 473 2 308 6.99e-54 186
Msa0459680 MtrunA17_Chr3g0114081 32.143 392 232 7 119 486 15 396 7.02e-52 187
Msa0459680 MtrunA17_Chr4g0029191 29.291 437 240 9 118 487 44 478 1.19e-51 186
Msa0459680 MtrunA17_Chr8g0347161 32.873 362 224 8 119 468 103 457 1.24e-51 186
Msa0459680 MtrunA17_Chr2g0301281 29.519 437 239 9 118 487 41 475 4.64e-51 185
Msa0459680 MtrunA17_Chr8g0347171 32.283 381 237 8 119 486 161 533 1.52e-50 184
Msa0459680 MtrunA17_Chr5g0443991 34.091 352 211 8 130 473 88 426 4.11e-50 184
Msa0459680 MtrunA17_Chr4g0034411 33.425 365 214 10 141 497 99 442 5.62e-50 184
Msa0459680 MtrunA17_Chr8g0347151 30.700 443 277 10 119 544 202 631 5.89e-50 182
Msa0459680 MtrunA17_Chr4g0062301 32.773 357 218 9 141 488 120 463 3.78e-49 179
Msa0459680 MtrunA17_Chr8g0386451 29.680 438 263 9 82 486 236 661 8.18e-49 181
Msa0459680 MtrunA17_Chr7g0236831 31.481 432 214 10 118 478 163 583 4.05e-48 179
Msa0459680 MtrunA17_Chr3g0145781 30.607 379 238 10 116 473 130 504 6.65e-43 161
Msa0459680 MtrunA17_Chr1g0192021 26.977 430 257 6 118 501 26 444 6.37e-40 153
Msa0459680 MtrunA17_Chr1g0169331 29.082 392 217 10 137 487 10 381 2.12e-39 148
Msa0459680 MtrunA17_Chr2g0309551 26.168 428 261 10 112 489 103 525 3.92e-38 147
Msa0459680 MtrunA17_Chr5g0429221 28.533 368 231 11 116 473 1 346 8.96e-37 141
Msa0459680 MtrunA17_Chr1g0179761 27.098 417 258 15 100 487 64 463 8.43e-32 128
Msa0459680 MtrunA17_Chr4g0039471 37.255 204 117 5 118 317 223 419 1.68e-30 123
Msa0459680 MtrunA17_Chr4g0039471 33.333 189 82 2 118 306 2 146 1.02e-20 94.7
Msa0459680 MtrunA17_Chr8g0342851 28.613 346 197 11 147 487 2 302 1.17e-29 119
Msa0459680 MtrunA17_Chr4g0004301 25.666 413 213 12 155 496 70 459 3.48e-28 118
Msa0459680 MtrunA17_Chr5g0434301 25.490 408 224 11 155 498 70 461 1.05e-27 116
Msa0459680 MtrunA17_Chr8g0349951 37.179 156 92 3 116 270 8 158 1.71e-26 105
Msa0459680 MtrunA17_Chr4g0074521 29.319 382 215 16 137 482 101 463 3.10e-25 108
Msa0459680 MtrunA17_Chr4g0062321 30.400 250 149 8 199 441 4 235 3.40e-25 104
Msa0459680 MtrunA17_Chr3g0137891 35.542 166 98 4 156 318 2 161 9.32e-23 97.1
Msa0459680 MtrunA17_Chr3g0137901 36.029 136 78 1 338 473 18 144 6.91e-22 93.2
Msa0459680 MtrunA17_Chr8g0364251 38.514 148 85 3 373 518 438 581 3.33e-19 91.3
Msa0459680 MtrunA17_Chr8g0364251 27.551 196 110 7 140 312 113 299 1.43e-11 67.0
Msa0459680 MtrunA17_Chr1g0155201 28.340 247 148 7 231 473 1 222 1.40e-18 87.4
Msa0459680 MtrunA17_Chr2g0300871 26.171 363 218 16 121 463 23 355 2.01e-16 82.8
Msa0459680 MtrunA17_Chr4g0025141 31.522 184 106 5 298 468 15 191 1.54e-15 76.6
Msa0459680 MtrunA17_Chr8g0377041 25.915 355 212 13 144 480 281 602 2.19e-14 76.6
Msa0459680 MtrunA17_Chr3g0108851 24.119 369 230 12 127 479 6 340 1.24e-12 70.9
Msa0459680 MtrunA17_Chr0c30g0494091 28.862 246 148 10 137 363 101 338 6.11e-12 67.8
Msa0459680 MtrunA17_Chr4g0058601 42.466 73 40 1 435 507 9 79 3.65e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0459680 AT1G55150.1 44.529 393 204 5 84 475 70 449 4.92e-112 343
Msa0459680 AT1G55150.2 44.529 393 204 5 84 475 95 474 1.14e-111 343
Msa0459680 AT5G63120.2 43.970 398 209 5 97 492 147 532 3.17e-107 333
Msa0459680 AT3G58570.1 43.564 404 208 6 102 492 131 527 1.08e-105 331
Msa0459680 AT2G42520.2 44.169 403 207 6 102 492 144 540 1.08e-104 328
Msa0459680 AT2G42520.1 44.169 403 207 6 102 492 144 540 1.08e-104 328
Msa0459680 AT2G42520.3 44.169 403 207 6 102 492 144 540 1.08e-104 328
Msa0459680 AT1G20920.2 40.436 413 230 4 84 493 162 561 1.30e-104 333
Msa0459680 AT2G33730.1 40.732 437 224 6 83 494 274 700 9.71e-103 326
Msa0459680 AT3G58510.1 43.250 400 213 5 102 492 136 530 1.71e-102 322
Msa0459680 AT3G58510.3 43.250 400 213 5 102 492 136 530 1.71e-102 322
Msa0459680 AT3G58510.2 43.250 400 213 5 102 492 136 530 1.71e-102 322
Msa0459680 AT1G20920.4 40.436 413 230 4 84 493 500 899 8.55e-102 333
Msa0459680 AT1G20920.6 40.436 413 230 4 84 493 500 899 8.55e-102 333
Msa0459680 AT1G20920.3 40.436 413 230 4 84 493 500 899 8.55e-102 333
Msa0459680 AT1G20920.7 40.436 413 230 4 84 493 500 899 8.55e-102 333
Msa0459680 AT1G20920.5 40.436 413 230 4 84 493 500 899 8.55e-102 333
Msa0459680 AT1G20920.1 40.436 413 230 4 84 493 500 899 8.55e-102 333
Msa0459680 AT2G47330.1 41.191 403 222 5 78 478 193 582 1.23e-98 316
Msa0459680 AT5G51280.1 39.604 404 222 6 78 473 111 500 1.99e-97 308
Msa0459680 AT4G33370.1 39.851 404 221 6 78 473 62 451 3.55e-96 303
Msa0459680 AT3G01540.4 42.278 395 209 7 102 492 145 524 3.31e-94 301
Msa0459680 AT3G01540.2 42.278 395 209 7 102 492 145 524 3.31e-94 301
Msa0459680 AT3G01540.3 42.278 395 209 7 102 492 145 524 3.31e-94 301
Msa0459680 AT3G01540.1 42.278 395 209 7 102 492 145 524 3.55e-94 300
Msa0459680 AT5G14610.2 41.985 393 213 6 102 492 148 527 1.41e-93 300
Msa0459680 AT5G14610.6 41.985 393 213 6 102 492 148 527 1.63e-93 300
Msa0459680 AT5G14610.5 41.985 393 213 6 102 492 156 535 2.47e-93 299
Msa0459680 AT3G09620.2 39.261 433 215 7 84 510 368 758 2.54e-91 301
Msa0459680 AT3G09620.1 39.261 433 215 7 84 510 367 757 2.60e-91 301
Msa0459680 AT5G14610.1 42.368 380 206 5 115 492 227 595 8.78e-91 294
Msa0459680 AT3G06480.1 40.047 427 225 10 74 492 398 801 1.18e-90 301
Msa0459680 AT5G14610.7 43.855 358 188 5 137 492 50 396 1.37e-90 288
Msa0459680 AT5G14610.3 43.855 358 188 5 137 492 50 396 1.37e-90 288
Msa0459680 AT1G28180.1 42.647 340 177 6 147 480 3 330 1.72e-87 275
Msa0459680 AT5G63120.1 43.188 345 182 5 97 439 147 479 5.32e-87 278
Msa0459680 AT5G63120.3 43.529 340 178 5 97 434 147 474 2.79e-86 276
Msa0459680 AT5G63120.4 43.529 340 178 5 97 434 147 474 2.79e-86 276
Msa0459680 AT5G63120.5 43.529 340 178 5 97 434 147 474 2.79e-86 276
Msa0459680 AT1G31970.1 38.974 390 220 7 137 517 134 514 2.54e-79 259
Msa0459680 AT3G22330.1 40.970 371 206 5 107 475 94 453 1.34e-78 259
Msa0459680 AT3G22310.2 40.323 372 209 5 121 490 120 480 1.22e-76 254
Msa0459680 AT3G22310.1 40.323 372 209 5 121 490 120 480 1.71e-76 254
Msa0459680 AT3G02065.3 36.761 389 231 6 98 480 91 470 8.00e-76 249
Msa0459680 AT3G02065.2 36.761 389 231 6 98 480 91 470 8.00e-76 249
Msa0459680 AT5G14610.4 40.643 342 188 6 102 441 156 484 5.18e-74 244
Msa0459680 AT3G06480.2 38.095 378 203 9 74 443 398 752 3.04e-72 246
Msa0459680 AT4G16630.1 36.702 376 226 5 117 490 167 532 5.67e-71 243
Msa0459680 AT5G60990.1 36.176 387 221 8 116 490 8 380 1.76e-69 231
Msa0459680 AT3G13920.3 36.000 375 218 5 117 487 29 385 2.93e-69 229
Msa0459680 AT3G13920.1 36.000 375 218 5 117 487 39 395 3.05e-69 229
Msa0459680 AT1G72730.1 35.467 375 220 5 117 487 41 397 3.15e-69 229
Msa0459680 AT1G54270.1 35.733 375 219 5 117 487 39 395 1.61e-68 227
Msa0459680 AT1G51380.1 34.400 375 228 6 115 487 20 378 3.84e-68 226
Msa0459680 AT3G13920.2 36.339 366 211 5 117 478 39 386 3.84e-68 226
Msa0459680 AT3G13920.5 36.339 366 211 5 117 478 43 390 4.23e-68 226
Msa0459680 AT3G19760.1 35.106 376 224 7 115 487 33 391 1.36e-67 224
Msa0459680 AT3G02065.1 37.537 341 198 6 146 480 2 333 4.43e-67 222
Msa0459680 AT3G13920.4 35.733 375 214 6 117 487 39 390 1.29e-66 222
Msa0459680 AT5G26742.3 38.965 367 191 10 118 475 20 362 4.11e-66 227
Msa0459680 AT1G54270.2 35.467 375 215 6 117 487 39 390 5.32e-66 220
Msa0459680 AT5G26742.1 40.351 342 181 7 143 475 128 455 1.55e-65 227
Msa0459680 AT5G26742.2 40.351 342 181 7 143 475 128 455 1.57e-65 227
Msa0459680 AT1G16280.1 35.835 413 227 12 139 542 80 463 4.84e-65 220
Msa0459680 AT1G77030.1 35.890 365 216 5 119 479 30 380 3.64e-64 225
Msa0459680 AT2G45810.1 33.058 363 225 5 119 480 156 501 1.05e-63 218
Msa0459680 AT4G00660.1 32.353 374 233 6 119 490 133 488 6.51e-63 215
Msa0459680 AT4G00660.2 32.353 374 233 6 119 490 133 488 6.51e-63 215
Msa0459680 AT3G61240.2 32.507 363 227 5 119 480 126 471 9.53e-63 214
Msa0459680 AT3G61240.1 32.507 363 227 5 119 480 126 471 9.53e-63 214
Msa0459680 AT3G09720.2 34.037 379 228 9 113 485 133 495 1.70e-60 209
Msa0459680 AT3G09720.1 34.037 379 228 9 113 485 133 495 1.70e-60 209
Msa0459680 AT5G11170.1 33.148 359 221 6 119 473 48 391 6.12e-60 205
Msa0459680 AT5G11200.1 33.148 359 221 6 119 473 48 391 6.12e-60 205
Msa0459680 AT5G62190.1 36.628 344 197 6 143 477 122 453 3.60e-57 203
Msa0459680 AT4G09730.1 30.730 397 245 8 116 494 111 495 1.20e-53 192
Msa0459680 AT5G63630.1 33.600 375 240 5 119 486 56 428 1.51e-53 190
Msa0459680 AT5G08620.1 33.071 381 234 7 119 486 82 454 1.64e-52 188
Msa0459680 AT5G11170.2 33.851 322 194 6 156 473 2 308 2.24e-52 182
Msa0459680 AT5G63630.2 33.600 375 240 5 119 486 250 622 4.16e-52 190
Msa0459680 AT5G11200.3 29.750 400 221 7 119 473 48 432 5.40e-52 185
Msa0459680 AT5G65900.1 33.594 384 225 10 117 488 154 519 1.54e-51 187
Msa0459680 AT5G08610.1 32.804 378 239 7 119 486 384 756 1.77e-51 189
Msa0459680 AT3G18600.1 34.218 339 198 10 141 470 113 435 7.32e-49 178
Msa0459680 AT5G54910.1 33.602 372 214 12 129 488 86 436 8.53e-48 178
Msa0459680 AT1G71370.1 31.215 362 217 8 141 486 40 385 1.92e-47 174
Msa0459680 AT2G40700.1 29.108 426 218 11 137 487 51 467 7.65e-46 171
Msa0459680 AT5G05450.1 29.765 383 238 7 124 486 23 394 1.09e-45 170
Msa0459680 AT3G16840.2 30.524 439 211 11 118 475 192 617 1.81e-45 172
Msa0459680 AT3G16840.1 30.524 439 211 11 118 475 191 616 1.82e-45 172
Msa0459680 AT2G07750.1 30.827 399 250 9 89 468 341 732 8.10e-44 167
Msa0459680 AT1G63250.1 31.233 365 227 8 119 468 330 685 4.14e-43 165
Msa0459680 AT3G06980.1 29.126 412 247 10 117 498 374 770 2.50e-42 162
Msa0459680 AT3G53110.1 29.136 405 254 12 89 476 65 453 8.97e-39 149
Msa0459680 AT1G12770.2 25.968 439 239 10 117 490 110 527 1.36e-38 149
Msa0459680 AT1G12770.1 25.968 439 239 10 117 490 110 527 1.36e-38 149
Msa0459680 AT1G51380.2 33.471 242 154 4 115 355 20 255 2.50e-37 140
Msa0459680 AT4G34910.1 28.499 393 228 7 117 464 46 430 7.92e-35 139
Msa0459680 AT1G51380.4 33.962 212 134 3 115 326 20 225 1.30e-34 133
Msa0459680 AT1G51380.3 33.962 212 134 3 115 326 20 225 1.95e-34 132
Msa0459680 AT1G71280.1 29.874 318 169 10 141 445 41 317 5.28e-31 126
Msa0459680 AT1G71280.2 30.380 316 164 11 141 441 41 315 3.60e-30 121
Msa0459680 AT4G15850.1 25.747 435 243 14 123 490 37 458 3.07e-28 119
Msa0459680 AT1G28180.2 49.565 115 54 2 147 258 3 116 5.43e-28 108
Msa0459680 AT5G11200.2 33.005 203 127 4 119 318 48 244 2.91e-27 115
Msa0459680 AT5G11200.2 29.596 223 136 5 254 473 246 450 7.00e-21 96.3
Msa0459680 AT5G19210.2 26.816 358 212 10 137 463 96 434 1.83e-25 110
Msa0459680 AT1G59990.1 29.707 239 152 5 287 519 343 571 3.12e-19 91.7
Msa0459680 AT1G59990.2 29.952 207 134 3 287 489 343 542 5.44e-19 90.9
Msa0459680 AT5G19210.1 25.843 267 158 7 223 463 25 277 9.10e-15 75.9
Msa0459680 AT5G19210.3 25.843 267 158 7 223 463 25 277 9.10e-15 75.9
Msa0459680 AT1G27880.1 25.459 381 224 14 144 504 274 614 1.52e-13 74.3
Msa0459680 AT1G27880.2 25.459 381 224 14 144 504 274 614 1.99e-13 73.9
Msa0459680 AT4G35740.1 25.373 335 209 14 144 463 41 349 1.18e-11 68.2

Find 186 sgRNAs with CRISPR-Local

Find 707 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTCAGAAGGTTGCCATTT+AGG 0.135437 3_3:+56346169 None:intergenic
TCTCAGTGGAAGGGATCTTT+TGG 0.241857 3_3:-56344490 Msa0459680:CDS
TGCTTCTTTCTCCTTCCTTC+TGG 0.259949 3_3:+56337097 None:intergenic
GAGTAGCTCAACAAGCATTT+TGG 0.283220 3_3:-56339809 Msa0459680:intron
GTTCAGAAGGTTGCCATTTA+GGG 0.284507 3_3:+56346170 None:intergenic
CTGATACTGTCTTCCCTAAA+TGG 0.292311 3_3:-56346183 Msa0459680:CDS
GTTTGTTGTTTGGCAGATAC+TGG 0.294467 3_3:-56336864 Msa0459680:three_prime_UTR
TGGTCCCTTGGCATTAGTTT+TGG 0.296036 3_3:-56344251 Msa0459680:CDS
AGTTCCTTGTGTCAAATATA+AGG 0.296346 3_3:-56337515 Msa0459680:CDS
TATAGAATCATTTAATGATA+TGG 0.319736 3_3:-56344741 Msa0459680:intron
GCCATAGCTGATGCTGAATC+TGG 0.320048 3_3:-56337489 Msa0459680:CDS
CATTTAGGGAAGACAGTATC+AGG 0.320307 3_3:+56346184 None:intergenic
GGCCGATAGAATGCTTGATA+TGG 0.329472 3_3:-56343021 Msa0459680:CDS
GCCCTCTCCTTTACTGTTTG+AGG 0.332926 3_3:+56336974 None:intergenic
TGCCACCGATGTTGCATCTC+GGG 0.342348 3_3:-56337989 Msa0459680:CDS
TTTGTAGATTTGTCAAGTTT+TGG 0.357141 3_3:-56336664 Msa0459680:three_prime_UTR
AACACAATTGTCAACGGAAA+TGG 0.358158 3_3:+56340678 None:intergenic
AAATGAAGTGTAACCTGGTC+AGG 0.362160 3_3:+56346130 None:intergenic
GTGGTGGTTGTCTAGGGTTC+CGG 0.364051 3_3:+56346333 None:intergenic
AACGCTGTGGCATTTGCTAC+TGG 0.365109 3_3:-56337465 Msa0459680:CDS
CGATGTTGCATCTCGGGGCT+TGG 0.366662 3_3:-56337983 Msa0459680:CDS
CATATCACGATCAGTGTAAA+AGG 0.370384 3_3:+56337623 None:intergenic
CAGTAGTGTTTGATGCTTCT+CGG 0.389827 3_3:+56341738 None:intergenic
AAAGATCATACCTGTATCAT+AGG 0.391082 3_3:+56344423 None:intergenic
CGTACTGTTTCACACGTTGT+AGG 0.392034 3_3:-56336818 Msa0459680:three_prime_UTR
CACGCCCTGTCCTTCCAATT+CGG 0.392743 3_3:+56337670 None:intergenic
AAGTGGTCAATGAACCTTCC+AGG 0.395271 3_3:+56343095 None:intergenic
TTTCACAATTCCTATGATAC+AGG 0.397978 3_3:-56344433 Msa0459680:intron
AGTTGCTAACTGTCATCTAT+AGG 0.399470 3_3:-56336886 Msa0459680:three_prime_UTR
GGACCATCTCCACGCCGAAT+TGG 0.401860 3_3:+56344268 None:intergenic
GAAGATTATATACACCGAAT+TGG 0.401922 3_3:-56337684 Msa0459680:CDS
GTTAGTTCCACCGACAACTA+TGG 0.402056 3_3:+56343568 None:intergenic
TCATCTATAGGTTTGTTGTT+TGG 0.406754 3_3:-56336874 Msa0459680:three_prime_UTR
TGTTGTGATGGTGGTGGTGG+TGG 0.407217 3_3:+56346311 None:intergenic
GTTGTCTAGGGTTCCGGTGG+TGG 0.415042 3_3:+56346339 None:intergenic
AGGAACATACGACATCGTTT+TGG 0.420487 3_3:+56346402 None:intergenic
TGTTGTTGTGATGGTGGTGG+TGG 0.421355 3_3:+56346308 None:intergenic
ACTGTCATTGATCAAATGTA+TGG 0.436180 3_3:+56336906 None:intergenic
ACAGGGCGTGCAGGATCAAC+TGG 0.436639 3_3:-56337657 Msa0459680:CDS
TTGCCACCGATGTTGCATCT+CGG 0.437769 3_3:-56337990 Msa0459680:CDS
TCTATAGGTGCGGGTGCAGC+AGG 0.440090 3_3:+56344758 None:intergenic
AGCTAGCCCCGTGCAAGTTA+AGG 0.441862 3_3:-56341295 Msa0459680:CDS
TCCCTTCCACTGAGAGCAAT+AGG 0.444154 3_3:+56344498 None:intergenic
GTTTGTGAAACATTAGTTGT+TGG 0.445736 3_3:+56341255 None:intergenic
GTCTAGGGTTCCGGTGGTGG+TGG 0.449534 3_3:+56346342 None:intergenic
ATATCATTAAATGATTCTAT+AGG 0.454220 3_3:+56344743 None:intergenic
CAATAGGCATGGCCTGTGCC+TGG 0.454732 3_3:+56344514 None:intergenic
TCCACGCCGAATTGGAGGTT+GGG 0.458235 3_3:+56344276 None:intergenic
GCTTGGCCCAACCTCCAATT+CGG 0.458736 3_3:-56344282 Msa0459680:CDS
GCAATGTCCTTCATGATACT+TGG 0.460880 3_3:+56344567 None:intergenic
GGTTCCGGTGGTGGTGGACA+CGG 0.463804 3_3:+56346348 None:intergenic
ATGTTAATTGAAGCAGCTCC+CGG 0.465193 3_3:+56337026 None:intergenic
GTGGTGGTGGTGGTTGTCTA+GGG 0.468734 3_3:+56346327 None:intergenic
TTCTCGCATGAACCCTGACC+AGG 0.471139 3_3:-56346143 Msa0459680:intron
GCCGATAGAATGCTTGATAT+GGG 0.476105 3_3:-56343020 Msa0459680:CDS
AATTGTGTTTGTTGAGAGAA+AGG 0.476180 3_3:-56340664 Msa0459680:intron
CTCCACGCCGAATTGGAGGT+TGG 0.480118 3_3:+56344275 None:intergenic
AGTAGTGTTTGATGCTTCTC+GGG 0.482623 3_3:+56341739 None:intergenic
TTTCCCACCTTAACTTGCAC+GGG 0.487794 3_3:+56341288 None:intergenic
TGTTGAGCGAGTTCTCTAGT+AGG 0.489132 3_3:+56344226 None:intergenic
CCTCCAATTCGGCGTGGAGA+TGG 0.492198 3_3:-56344271 Msa0459680:CDS
ATGCGAGAAACGCGTTCAGA+AGG 0.494455 3_3:+56346157 None:intergenic
TTTAAAACTGCCATAGTTGT+CGG 0.495359 3_3:-56343578 Msa0459680:CDS
TTTGTGAAACATTAGTTGTT+GGG 0.495804 3_3:+56341256 None:intergenic
ATTGAAGAGAGAAGGAGTGT+TGG 0.497216 3_3:+56346261 None:intergenic
CGAGAGATCTGCTAAAAGCT+TGG 0.501382 3_3:+56343606 None:intergenic
GCTTGTAGAGGAGGCATCAC+AGG 0.503797 3_3:-56340718 Msa0459680:CDS
ATACACCGAATTGGAAGGAC+AGG 0.507173 3_3:-56337675 Msa0459680:CDS
CCATCTCCACGCCGAATTGG+AGG 0.508644 3_3:+56344271 None:intergenic
AGGTAGTGAGAGTGAAGAGG+TGG 0.508822 3_3:+56346491 None:intergenic
ACGCTGTGGCATTTGCTACT+GGG 0.512452 3_3:-56337464 Msa0459680:CDS
TCTAGATTTGCTTGTAGAGG+AGG 0.514101 3_3:-56340727 Msa0459680:CDS
CACCAGGCCAACTTCTATCC+AGG 0.516928 3_3:-56344532 Msa0459680:CDS
TGCCTGGATAGAAGTTGGCC+TGG 0.517916 3_3:+56344530 None:intergenic
AGCAGCAGCTGCACACAAAG+AGG 0.520446 3_3:-56337078 Msa0459680:CDS
ATTGGAAGGACAGGGCGTGC+AGG 0.521338 3_3:-56337666 Msa0459680:CDS
CGAGGTTGTTGTTGTGATGG+TGG 0.521451 3_3:+56346302 None:intergenic
TGCCTATTGCTCTCAGTGGA+AGG 0.522165 3_3:-56344500 Msa0459680:CDS
ACGGAGGAGCGGCGGAGGTA+CGG 0.523275 3_3:+56346230 None:intergenic
GCTGAAGCATTAATTGCTCA+AGG 0.526943 3_3:-56339901 Msa0459680:CDS
CCCAGATTCAGCATCAGCTA+TGG 0.530619 3_3:+56337488 None:intergenic
ACCACCGTGTCCACCACCAC+CGG 0.533306 3_3:-56346352 Msa0459680:CDS
GCCACCGATGTTGCATCTCG+GGG 0.535084 3_3:-56337988 Msa0459680:CDS
GACAATGCTTCGATCTCCAC+AGG 0.535617 3_3:+56341700 None:intergenic
ATGCGAGGTTGTTGTTGTGA+TGG 0.536258 3_3:+56346299 None:intergenic
CGACTCTACAAATTGTGTCT+AGG 0.538187 3_3:+56336767 None:intergenic
CGACGACGGAGGAGCGGCGG+AGG 0.540054 3_3:+56346225 None:intergenic
GCCTGTGCCTGGATAGAAGT+TGG 0.542791 3_3:+56344525 None:intergenic
TTATCGAAACACCTTGGACC+GGG 0.544437 3_3:-56337044 Msa0459680:CDS
CCATAGCTGATGCTGAATCT+GGG 0.545985 3_3:-56337488 Msa0459680:CDS
TTCTTATGTTGTTCTAGATG+AGG 0.546906 3_3:-56343042 Msa0459680:CDS
AAGTGTTGCCTTGTTGTAAG+TGG 0.547719 3_3:+56343078 None:intergenic
ACCCATATCAAGCATTCTAT+CGG 0.548041 3_3:+56343019 None:intergenic
TTAAATGATTCTATAGGTGC+GGG 0.548702 3_3:+56344749 None:intergenic
CGAGAGGCATTGAAGAGAGA+AGG 0.549121 3_3:+56346253 None:intergenic
TGAATAGAATAAGAAGTGAA+AGG 0.549812 3_3:+56346471 None:intergenic
CTTTCCTTATATTTGACACA+AGG 0.550069 3_3:+56337511 None:intergenic
TTATCTGCAGTTTCTCTGCA+TGG 0.552089 3_3:-56339877 Msa0459680:CDS
GAAATAGCAGTTGCCACCCC+TGG 0.552707 3_3:-56343113 Msa0459680:CDS
TTTATCGAAACACCTTGGAC+CGG 0.559110 3_3:-56337045 Msa0459680:CDS
AGGGCACAGCTGATAGTGCA+TGG 0.562255 3_3:-56336956 Msa0459680:CDS
ACTTCTAGATTTGCTTGTAG+AGG 0.563809 3_3:-56340730 Msa0459680:CDS
ATTATGAATGGTTTAAACAA+AGG 0.565193 3_3:+56336609 None:intergenic
ATTAAATGATTCTATAGGTG+CGG 0.565742 3_3:+56344748 None:intergenic
ATTGCTTTATCGAAACACCT+TGG 0.567677 3_3:-56337050 Msa0459680:CDS
AGTGGTCAATGAACCTTCCA+GGG 0.568417 3_3:+56343096 None:intergenic
TTGAAGCAGCTCCCGGTCCA+AGG 0.568651 3_3:+56337033 None:intergenic
GTCAATGAACCTTCCAGGGG+TGG 0.569529 3_3:+56343100 None:intergenic
TCGGCGTGGAGATGGTCCCT+TGG 0.569567 3_3:-56344263 Msa0459680:CDS
GGTTGTTGTTGTGATGGTGG+TGG 0.570900 3_3:+56346305 None:intergenic
TCTCGGGGCTTGGATGTCAC+AGG 0.572787 3_3:-56337973 Msa0459680:CDS
CCGCAGTCAGAGTGAAAGAG+AGG 0.574239 3_3:-56339851 Msa0459680:CDS
CTGTCATTGATCAAATGTAT+GGG 0.574689 3_3:+56336907 None:intergenic
ATTGCTGCCTCAAACAGTAA+AGG 0.575875 3_3:-56336981 Msa0459680:CDS
AACATAAGAAATTCTAGAGA+GGG 0.575995 3_3:+56343055 None:intergenic
GCCTATTGCTCTCAGTGGAA+GGG 0.576287 3_3:-56344499 Msa0459680:CDS
TAGCCCCGTGCAAGTTAAGG+TGG 0.577296 3_3:-56341292 Msa0459680:CDS
GCCAACTTCTATCCAGGCAC+AGG 0.578293 3_3:-56344526 Msa0459680:CDS
TGTTTCACAAACTCTTGTGA+AGG 0.581760 3_3:-56341244 Msa0459680:CDS
ATTATATACACCGAATTGGA+AGG 0.582011 3_3:-56337680 Msa0459680:CDS
ACGATCAGTGTAAAAGGAGG+TGG 0.582616 3_3:+56337629 None:intergenic
GAAGGTTTCTGAAAATGAGA+AGG 0.582758 3_3:-56341226 Msa0459680:intron
ATTCTAGGTTGCCAGAAGGA+AGG 0.587037 3_3:-56337108 Msa0459680:intron
CAGAGGTCTGAACTAAGAGC+CGG 0.590873 3_3:-56343140 Msa0459680:CDS
TAGCAGTTGCCACCCCTGGA+AGG 0.591192 3_3:-56343109 Msa0459680:CDS
CTCGCCGCGTTTCTCAAGTG+TGG 0.594676 3_3:+56346379 None:intergenic
AGGAGCCAAAACTAATGCCA+AGG 0.597502 3_3:+56344246 None:intergenic
GCCCCGAGATGCAACATCGG+TGG 0.599055 3_3:+56337987 None:intergenic
GAAAGGTAGTGAGAGTGAAG+AGG 0.599305 3_3:+56346488 None:intergenic
GTGGTTGTCTAGGGTTCCGG+TGG 0.601228 3_3:+56346336 None:intergenic
AGTCCTCGACGACGGAGGAG+CGG 0.602982 3_3:+56346219 None:intergenic
TGTTTGGCAGATACTGGAGA+TGG 0.604648 3_3:-56336858 Msa0459680:three_prime_UTR
GGCAACTGCTATTTCAACTC+CGG 0.609866 3_3:+56343121 None:intergenic
CAACATAAGAAATTCTAGAG+AGG 0.612258 3_3:+56343054 None:intergenic
AAAACTGCCATAGTTGTCGG+TGG 0.613610 3_3:-56343575 Msa0459680:CDS
AGCGGCGGAGGTACGGCGAG+AGG 0.615883 3_3:+56346237 None:intergenic
GCCTCAAACAGTAAAGGAGA+GGG 0.619082 3_3:-56336975 Msa0459680:CDS
TTATTACGTCCAGATTGAAG+AGG 0.619338 3_3:-56344825 Msa0459680:intron
CCTCGACGACGGAGGAGCGG+CGG 0.619461 3_3:+56346222 None:intergenic
GGTTAATCTAAATTCTCGAG+AGG 0.619955 3_3:+56346423 None:intergenic
GGGCACAGCTGATAGTGCAT+GGG 0.620160 3_3:-56336955 Msa0459680:CDS
CCGCCGCTCCTCCGTCGTCG+AGG 0.622210 3_3:-56346222 Msa0459680:CDS
TTTGCATCCAAGTATCATGA+AGG 0.622983 3_3:-56344574 Msa0459680:CDS
TCGGTGTATATAATCTTCTG+TGG 0.623957 3_3:+56337689 None:intergenic
CTACAAGCAAATCTAGAAGT+CGG 0.624530 3_3:+56340733 None:intergenic
TAACATCAAGATTTAGCCGA+TGG 0.624583 3_3:+56344798 None:intergenic
AGATTGAAGAGGTCCGCCAT+CGG 0.626250 3_3:-56344814 Msa0459680:CDS
TCAACAAACACAATTGTCAA+CGG 0.626401 3_3:+56340672 None:intergenic
TTGCATTCTAGGTTGCCAGA+AGG 0.627632 3_3:-56337112 Msa0459680:intron
TGTGGCATTTGCTACTGGGA+AGG 0.629651 3_3:-56337460 Msa0459680:intron
GGTTGTGCTGAAACTGGTAG+CGG 0.630737 3_3:-56344468 Msa0459680:CDS
CCTCTCTTTCACTCTGACTG+CGG 0.633833 3_3:+56339851 None:intergenic
AATTTGTAGAGTCGTCATGT+AGG 0.634510 3_3:-56336758 Msa0459680:three_prime_UTR
AATGAAGTGTAACCTGGTCA+GGG 0.635606 3_3:+56346131 None:intergenic
TTGCTTATCATGATTACACC+AGG 0.635728 3_3:-56344548 Msa0459680:CDS
TCCGGTGGTGGTGGACACGG+TGG 0.636598 3_3:+56346351 None:intergenic
TTCATTGACCACTTACAACA+AGG 0.636813 3_3:-56343086 Msa0459680:CDS
CAAGCCCCGAGATGCAACAT+CGG 0.637248 3_3:+56337984 None:intergenic
CATCAATCTTGATCTTCCAA+AGG 0.640140 3_3:-56337938 Msa0459680:intron
TGCCTCAAACAGTAAAGGAG+AGG 0.641875 3_3:-56336976 Msa0459680:CDS
AGCCCCGTGCAAGTTAAGGT+GGG 0.642374 3_3:-56341291 Msa0459680:CDS
TCCACTGAGAGCAATAGGCA+TGG 0.646189 3_3:+56344503 None:intergenic
GCCCAACCTCCAATTCGGCG+TGG 0.651332 3_3:-56344277 Msa0459680:CDS
TGCTGAATCTGGGAACGCTG+TGG 0.652610 3_3:-56337478 Msa0459680:CDS
GCCGCGTTTCTCAAGTGTGG+AGG 0.654092 3_3:+56346382 None:intergenic
GGAGCCAAAACTAATGCCAA+GGG 0.654921 3_3:+56344247 None:intergenic
GTTGTGCTGAAACTGGTAGC+GGG 0.655682 3_3:-56344467 Msa0459680:CDS
CATCAAGATTTAGCCGATGG+CGG 0.658625 3_3:+56344801 None:intergenic
TCATTGATCAAATGTATGGG+AGG 0.658636 3_3:+56336910 None:intergenic
GGAGATCGAAGCATTGTCCA+AGG 0.659225 3_3:-56341695 Msa0459680:intron
GTTCAGTGCAACTATGCCTG+TGG 0.663133 3_3:-56341716 Msa0459680:CDS
GCGATAGTCCTCGACGACGG+AGG 0.665385 3_3:+56346214 None:intergenic
AGGGAAGACAGTATCAGGAA+CGG 0.667033 3_3:+56346189 None:intergenic
GCCATGCCTATTGCTCTCAG+TGG 0.671881 3_3:-56344504 Msa0459680:CDS
TTCCCACCTTAACTTGCACG+GGG 0.673400 3_3:+56341289 None:intergenic
ATCACGATCAGTGTAAAAGG+AGG 0.686877 3_3:+56337626 None:intergenic
ACACGTTGTAGGTAGCACAC+TGG 0.688378 3_3:-56336807 Msa0459680:three_prime_UTR
GCTACTCCGAAAATCATGCA+AGG 0.693862 3_3:+56339825 None:intergenic
ACACTAACCTCCCTTATCTG+CGG 0.696878 3_3:+56342990 None:intergenic
GCGGCGATAGTCCTCGACGA+CGG 0.700555 3_3:+56346211 None:intergenic
GTGGTCAATGAACCTTCCAG+GGG 0.719357 3_3:+56343097 None:intergenic
AATGTGAGTTTGAGAATGCG+AGG 0.721069 3_3:+56346284 None:intergenic
GAAGACAGTATCAGGAACGG+CGG 0.721869 3_3:+56346192 None:intergenic
TCCTCCACACTTGAGAAACG+CGG 0.735500 3_3:-56346383 Msa0459680:CDS
TCTGCAGTTTCTCTGCATGG+CGG 0.737788 3_3:-56339874 Msa0459680:CDS
TACACCGAATTGGAAGGACA+GGG 0.744596 3_3:-56337674 Msa0459680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATATTTATATTTCTTCT+AGG - chr3_3:56338360-56338379 Msa0459680:intron 10.0%
!!! ATTTATGTTTGTTAAAATAT+AGG - chr3_3:56340793-56340812 Msa0459680:intron 10.0%
!!! TGTTTTACATTTAAATATTT+GGG + chr3_3:56340963-56340982 None:intergenic 10.0%
!!! TTGTTTTACATTTAAATATT+TGG + chr3_3:56340964-56340983 None:intergenic 10.0%
!! ATATTTAAATGTAAAACAAA+AGG - chr3_3:56340965-56340984 Msa0459680:intron 10.0%
!!! TGATTAAAAATAGTTTTAAA+AGG + chr3_3:56341651-56341670 None:intergenic 10.0%
!!! CTTTTTTCATAAAAATTATA+AGG + chr3_3:56343045-56343064 None:intergenic 10.0%
!! TGTTTATATGATAAAATATT+AGG - chr3_3:56344119-56344138 Msa0459680:intron 10.0%
!!! TCATTTTCTCAAATTATTAT+CGG + chr3_3:56337146-56337165 None:intergenic 15.0%
!!! AATTCAGCAAAATAAATTTT+TGG + chr3_3:56337945-56337964 None:intergenic 15.0%
!!! AAAAATTTATTTTGCTGAAT+TGG - chr3_3:56337944-56337963 Msa0459680:CDS 15.0%
!! ATATCAATACAAGTATATAA+AGG + chr3_3:56338118-56338137 None:intergenic 15.0%
!! ATATCATTAAATGATTCTAT+AGG + chr3_3:56338303-56338322 None:intergenic 15.0%
!! TATAGAATCATTTAATGATA+TGG - chr3_3:56338302-56338321 Msa0459680:intron 15.0%
!! AGAAAGGAAAAAAATTAAAA+AGG + chr3_3:56338729-56338748 None:intergenic 15.0%
!!! TTTTTTTTCCTTTTATTTTG+TGG - chr3_3:56339111-56339130 Msa0459680:intron 15.0%
!! ATTTATATCCACAAAATAAA+AGG + chr3_3:56339122-56339141 None:intergenic 15.0%
!! TTACATAAATAATTTGACAT+GGG - chr3_3:56339228-56339247 Msa0459680:intron 15.0%
!! TTACAAAATTCTGTTAAATA+TGG - chr3_3:56339592-56339611 Msa0459680:intron 15.0%
!! TATAATTGTCTTCAAAATAA+AGG + chr3_3:56340109-56340128 None:intergenic 15.0%
!! TGCACTATTTATATTAAATT+AGG + chr3_3:56340134-56340153 None:intergenic 15.0%
!! AATAATCAAGACTAAAATAA+AGG + chr3_3:56341241-56341260 None:intergenic 15.0%
!!! TATCATCTTTTATCATATAT+GGG + chr3_3:56341615-56341634 None:intergenic 15.0%
!!! ATATCATCTTTTATCATATA+TGG + chr3_3:56341616-56341635 None:intergenic 15.0%
!!! GTTTTAAAAGGATATATTTT+GGG + chr3_3:56341639-56341658 None:intergenic 15.0%
!!! AGTTTTAAAAGGATATATTT+TGG + chr3_3:56341640-56341659 None:intergenic 15.0%
!! TAAAAATAATATTTCAGAAC+TGG + chr3_3:56341941-56341960 None:intergenic 15.0%
!! TAAAAATTGAAATATTGCAT+TGG - chr3_3:56342828-56342847 Msa0459680:intron 15.0%
!!! ATATAATATATCGATTCAAA+TGG - chr3_3:56343544-56343563 Msa0459680:intron 15.0%
!! AAAAAAGATACAATTATGAA+TGG + chr3_3:56346449-56346468 None:intergenic 15.0%
!!! ATTTTGAAATTCGTGTTATT+AGG - chr3_3:56336932-56336951 Msa0459680:exon 20.0%
!!! TTTTGAAATTCGTGTTATTA+GGG - chr3_3:56336933-56336952 Msa0459680:exon 20.0%
!! TTGGAATTAGAATATGATTA+TGG - chr3_3:56337275-56337294 Msa0459680:intron 20.0%
!! TTATAGTTACCATTTATCTT+TGG - chr3_3:56337845-56337864 Msa0459680:intron 20.0%
!!! AACTAGTTTAACTTTGAAAA+GGG + chr3_3:56338087-56338106 None:intergenic 20.0%
!!! TAACTAGTTTAACTTTGAAA+AGG + chr3_3:56338088-56338107 None:intergenic 20.0%
!! TATGATCATGTGAAAAAATA+TGG - chr3_3:56338174-56338193 Msa0459680:intron 20.0%
!! TGATATCTTTAATTACTTTG+TGG - chr3_3:56338674-56338693 Msa0459680:intron 20.0%
!!! ATATATATTGTTTTATGTGC+AGG - chr3_3:56338856-56338875 Msa0459680:intron 20.0%
!!! AGAAAATTATCATCTAGAAT+TGG + chr3_3:56338923-56338942 None:intergenic 20.0%
!! CTTACATAAATAATTTGACA+TGG - chr3_3:56339227-56339246 Msa0459680:intron 20.0%
!! TTACTTGGTTGAAATAATAT+CGG + chr3_3:56339803-56339822 None:intergenic 20.0%
!! TATAGAAGGTAATATTGAAA+TGG + chr3_3:56340334-56340353 None:intergenic 20.0%
!!! ATCTTTTATTTTCTGTTTCT+TGG + chr3_3:56340456-56340475 None:intergenic 20.0%
!! ATATCAATATAGCAAAACAA+CGG - chr3_3:56340610-56340629 Msa0459680:intron 20.0%
!! TAATATGCACCTTAAAAAAT+GGG + chr3_3:56341046-56341065 None:intergenic 20.0%
!!! ATTTTTTAAGGTGCATATTA+GGG - chr3_3:56341046-56341065 Msa0459680:intron 20.0%
!! TCTTAACTTAAGAATATTTC+TGG - chr3_3:56341097-56341116 Msa0459680:intron 20.0%
!!! TGAAAATGAATTTTCTATCA+AGG + chr3_3:56341191-56341210 None:intergenic 20.0%
!! CACTTCATATTATTAAAACA+TGG + chr3_3:56341431-56341450 None:intergenic 20.0%
!! ATATCATTAGGTAGTTATAA+GGG - chr3_3:56342647-56342666 Msa0459680:intron 20.0%
!! ACTTCTTACAAAATAAACAT+AGG - chr3_3:56344082-56344101 Msa0459680:intron 20.0%
!! GGTAAAACTTATATCAAAAT+AGG - chr3_3:56344140-56344159 Msa0459680:intron 20.0%
!! ATAAGCATGAAACAAATTAT+TGG - chr3_3:56344180-56344199 Msa0459680:intron 20.0%
!! ATCAATATTCATTATTCTTG+CGG - chr3_3:56344339-56344358 Msa0459680:intron 20.0%
!! ATGTCGCATATATAAATAAA+AGG + chr3_3:56344744-56344763 None:intergenic 20.0%
!!! AACTGCAATAAATAAAGTTT+TGG - chr3_3:56344982-56345001 Msa0459680:intron 20.0%
!!! ACTGCAATAAATAAAGTTTT+GGG - chr3_3:56344983-56345002 Msa0459680:intron 20.0%
!!! TTTTTATCCTTAAAGAAAAG+AGG + chr3_3:56345457-56345476 None:intergenic 20.0%
!! TCTTGGTTTAAACATTAATA+CGG - chr3_3:56345496-56345515 Msa0459680:intron 20.0%
!!! AGCTTTCATTATAATTTTAC+AGG - chr3_3:56345680-56345699 Msa0459680:intron 20.0%
!! ATTATGAATGGTTTAAACAA+AGG + chr3_3:56346437-56346456 None:intergenic 20.0%
!! GAAAAAAATAGTCATTTGAT+TGG + chr3_3:56346475-56346494 None:intergenic 20.0%
! TGAATAGAATAAGAAGTGAA+AGG + chr3_3:56336575-56336594 None:intergenic 25.0%
! TTGTGAAGTTATGGTTTAAT+TGG - chr3_3:56337256-56337275 Msa0459680:intron 25.0%
! AGCTATGAAAATTAGAGAAA+TGG - chr3_3:56337328-56337347 Msa0459680:intron 25.0%
!!! GTGTAATTTTAACTTCATTG+TGG - chr3_3:56337350-56337369 Msa0459680:intron 25.0%
!! TGGTTGAATGTTCTTTTTAT+TGG - chr3_3:56337370-56337389 Msa0459680:intron 25.0%
!! AATGTTCTTTTTATTGGATG+TGG - chr3_3:56337376-56337395 Msa0459680:intron 25.0%
! GTAGGATAGTATTGTATTAT+TGG - chr3_3:56337403-56337422 Msa0459680:intron 25.0%
!!! TGTAATTTTAGTGAATAAGC+AGG - chr3_3:56337453-56337472 Msa0459680:intron 25.0%
! TACAAAATGTTGTCAAATAG+CGG - chr3_3:56337640-56337659 Msa0459680:CDS 25.0%
!! ACTTTTCATCCAAAGATAAA+TGG + chr3_3:56337857-56337876 None:intergenic 25.0%
!! GAAAAATTGATAACATTCCT+TGG + chr3_3:56337906-56337925 None:intergenic 25.0%
! TTATACATTGAGAATTCTAG+AGG + chr3_3:56338063-56338082 None:intergenic 25.0%
! ATTAAATGATTCTATAGGTG+CGG + chr3_3:56338298-56338317 None:intergenic 25.0%
! AAAGGATAATCATTTACAGT+TGG + chr3_3:56338711-56338730 None:intergenic 25.0%
! AAGCAATGCTAAAAATAGAA+AGG + chr3_3:56338745-56338764 None:intergenic 25.0%
!!! TTTCTATTTTTAGCATTGCT+TGG - chr3_3:56338744-56338763 Msa0459680:intron 25.0%
! TTGCAAGCTATAAATAGTTT+AGG - chr3_3:56338943-56338962 Msa0459680:intron 25.0%
!!! TCCTATTTTTTTGTCAGATT+TGG - chr3_3:56339026-56339045 Msa0459680:intron 25.0%
! TCCAAATCTGACAAAAAAAT+AGG + chr3_3:56339030-56339049 None:intergenic 25.0%
!! TTTTAATCAGTGAAAGGAAA+TGG - chr3_3:56339053-56339072 Msa0459680:intron 25.0%
! GGAAAAAAAAAAACTTCTCA+GGG + chr3_3:56339101-56339120 None:intergenic 25.0%
! AGGAAAAAAAAAAACTTCTC+AGG + chr3_3:56339102-56339121 None:intergenic 25.0%
! TGATTCATAGAAATGGAAAA+AGG + chr3_3:56339363-56339382 None:intergenic 25.0%
!!! ATCTATGTTGTTTTGACTTT+CGG - chr3_3:56339409-56339428 Msa0459680:intron 25.0%
! AAATCCTTGATATCAATTCT+TGG - chr3_3:56339668-56339687 Msa0459680:intron 25.0%
!! TTTCAACCAAGTAAAAGTTT+TGG - chr3_3:56339809-56339828 Msa0459680:intron 25.0%
!! TTGTATCCAAAACTTTTACT+TGG + chr3_3:56339818-56339837 None:intergenic 25.0%
!!! AAGTAAAAGTTTTGGATACA+AGG - chr3_3:56339817-56339836 Msa0459680:CDS 25.0%
! ATTATGTGTATGTTTCTTTC+TGG - chr3_3:56339871-56339890 Msa0459680:CDS 25.0%
!! AACATAAGAAATTCTAGAGA+GGG + chr3_3:56339991-56340010 None:intergenic 25.0%
!!! GATTTTTGGTTATGACTTAT+GGG - chr3_3:56340267-56340286 Msa0459680:intron 25.0%
! TCAATATTACCTTCTATAAC+AGG - chr3_3:56340336-56340355 Msa0459680:intron 25.0%
! AGGATATGGAATTTGAATAA+GGG + chr3_3:56340557-56340576 None:intergenic 25.0%
! AAGGATATGGAATTTGAATA+AGG + chr3_3:56340558-56340577 None:intergenic 25.0%
!!! ACTTTAAAATGAGATGGAAT+GGG + chr3_3:56340672-56340691 None:intergenic 25.0%
! TGCTAACTTATTTAACGATT+TGG - chr3_3:56340691-56340710 Msa0459680:CDS 25.0%
!!! CTTATTTAACGATTTGGTTA+TGG - chr3_3:56340697-56340716 Msa0459680:CDS 25.0%
! CATTAACAAAACTAGTTAGA+GGG + chr3_3:56340739-56340758 None:intergenic 25.0%
! TCATTAACAAAACTAGTTAG+AGG + chr3_3:56340740-56340759 None:intergenic 25.0%
! GTAAAACAAAAGGAAAATAG+TGG - chr3_3:56340975-56340994 Msa0459680:intron 25.0%
! CTAATATGCACCTTAAAAAA+TGG + chr3_3:56341047-56341066 None:intergenic 25.0%
!!! CATTTTTTAAGGTGCATATT+AGG - chr3_3:56341045-56341064 Msa0459680:intron 25.0%
!!! TTTTTTAAGGTGCATATTAG+GGG - chr3_3:56341047-56341066 Msa0459680:intron 25.0%
! CTCTGTAAATAAGCAAAATA+TGG - chr3_3:56341127-56341146 Msa0459680:intron 25.0%
!! TTATTGCTTGAATTTGCTTT+GGG + chr3_3:56341161-56341180 None:intergenic 25.0%
!! TTTATTGCTTGAATTTGCTT+TGG + chr3_3:56341162-56341181 None:intergenic 25.0%
!! ATAATGACTTTGAAAAACTC+AGG + chr3_3:56341397-56341416 None:intergenic 25.0%
! ATTATTAAAACATGGCTCAA+TGG + chr3_3:56341423-56341442 None:intergenic 25.0%
! AAGATTCTATCTATGTTCAT+TGG - chr3_3:56341698-56341717 Msa0459680:CDS 25.0%
! TTTGTGAAACATTAGTTGTT+GGG + chr3_3:56341790-56341809 None:intergenic 25.0%
!!! TGAATATTTTTGTTATGAGC+TGG - chr3_3:56341864-56341883 Msa0459680:intron 25.0%
!!! GAATATTTTTGTTATGAGCT+GGG - chr3_3:56341865-56341884 Msa0459680:intron 25.0%
!! GCATGCAAATTTTTAAATAC+TGG - chr3_3:56342028-56342047 Msa0459680:intron 25.0%
! ATTAGAAAAGTTCGAGATAA+TGG - chr3_3:56342105-56342124 Msa0459680:intron 25.0%
! TATGATACTATACATAGCAT+GGG + chr3_3:56342421-56342440 None:intergenic 25.0%
! ATATGATACTATACATAGCA+TGG + chr3_3:56342422-56342441 None:intergenic 25.0%
! TATAGTATCATATCTACCTT+AGG - chr3_3:56342429-56342448 Msa0459680:intron 25.0%
! CATATCATTAGGTAGTTATA+AGG - chr3_3:56342646-56342665 Msa0459680:intron 25.0%
!!! TAGTATTATGTTTTAGAGAG+AGG - chr3_3:56342682-56342701 Msa0459680:intron 25.0%
!! TCAGAGTTATCTTTTCTTTT+AGG - chr3_3:56342765-56342784 Msa0459680:intron 25.0%
!! CAGAGTTATCTTTTCTTTTA+GGG - chr3_3:56342766-56342785 Msa0459680:intron 25.0%
! AATTTCATTTAGCGAACAAA+GGG + chr3_3:56343492-56343511 None:intergenic 25.0%
! ATTCCTTTGTTGAATCAAAT+AGG - chr3_3:56343509-56343528 Msa0459680:intron 25.0%
! TTCCTTTGTTGAATCAAATA+GGG - chr3_3:56343510-56343529 Msa0459680:intron 25.0%
!!! TGTACTATTTTTTTATCTCG+CGG + chr3_3:56344044-56344063 None:intergenic 25.0%
! TTATTCTTGAGCTATGTAAT+TGG - chr3_3:56344301-56344320 Msa0459680:intron 25.0%
! TATTCTTGAGCTATGTAATT+GGG - chr3_3:56344302-56344321 Msa0459680:intron 25.0%
!!! CCTTTTTAATTAGATGTACA+CGG + chr3_3:56344601-56344620 None:intergenic 25.0%
! CGCATATATAAATAAAAGGA+CGG + chr3_3:56344740-56344759 None:intergenic 25.0%
!! CATGAAGTATCAAAATTCAT+AGG + chr3_3:56344898-56344917 None:intergenic 25.0%
!! ATACAGTACACTGATTAATA+TGG + chr3_3:56345025-56345044 None:intergenic 25.0%
! TTCAGATAATCTATTCTTTG+TGG + chr3_3:56345189-56345208 None:intergenic 25.0%
! ATAGATTATCTGAAAATGTG+TGG - chr3_3:56345195-56345214 Msa0459680:intron 25.0%
! ATTTGGTATACCCTTAATAT+GGG - chr3_3:56345640-56345659 Msa0459680:intron 25.0%
!! TATTTTTCACCCCATATTAA+GGG + chr3_3:56345653-56345672 None:intergenic 25.0%
!!! TTATTTTTCACCCCATATTA+AGG + chr3_3:56345654-56345673 None:intergenic 25.0%
! TTAATATGGGGTGAAAAATA+AGG - chr3_3:56345653-56345672 Msa0459680:intron 25.0%
! GTTTGAATTTGACATTGTTT+GGG + chr3_3:56345869-56345888 None:intergenic 25.0%
! AGTTTGAATTTGACATTGTT+TGG + chr3_3:56345870-56345889 None:intergenic 25.0%
! TTTCTTTACTATTGCATTCT+AGG - chr3_3:56345920-56345939 Msa0459680:intron 25.0%
!! TTTGTAGATTTGTCAAGTTT+TGG - chr3_3:56346379-56346398 Msa0459680:CDS 25.0%
TTTCAAAATGAAGTGTAACC+TGG + chr3_3:56336921-56336940 None:intergenic 30.0%
GTGAAGTTGTATTTGAATTG+AGG - chr3_3:56337038-56337057 Msa0459680:CDS 30.0%
AAGTTGTATTTGAATTGAGG+TGG - chr3_3:56337041-56337060 Msa0459680:CDS 30.0%
ATATTCACTAGAGTGTGATT+AGG - chr3_3:56337072-56337091 Msa0459680:CDS 30.0%
ACATCTTCTATCAGAAATGT+CGG - chr3_3:56337209-56337228 Msa0459680:intron 30.0%
AGAATATGATTATGGCATTG+TGG - chr3_3:56337283-56337302 Msa0459680:intron 30.0%
!! TATTGGTGAGTTTGTTACTT+TGG - chr3_3:56337420-56337439 Msa0459680:intron 30.0%
!! ATTGGTGAGTTTGTTACTTT+GGG - chr3_3:56337421-56337440 Msa0459680:intron 30.0%
ACTACTATAGTAGCTGAATT+TGG - chr3_3:56337581-56337600 Msa0459680:intron 30.0%
TTAGAATCCCTACAATAACA+GGG + chr3_3:56337805-56337824 None:intergenic 30.0%
ATTAGAATCCCTACAATAAC+AGG + chr3_3:56337806-56337825 None:intergenic 30.0%
GTTTCAACAATCTCTCAATT+GGG - chr3_3:56337966-56337985 Msa0459680:CDS 30.0%
!! TTGATATCCTGTTATTTCAG+TGG - chr3_3:56338131-56338150 Msa0459680:intron 30.0%
TTAAATGATTCTATAGGTGC+GGG + chr3_3:56338297-56338316 None:intergenic 30.0%
TTTCACAATTCCTATGATAC+AGG - chr3_3:56338610-56338629 Msa0459680:intron 30.0%
AAAGATCATACCTGTATCAT+AGG + chr3_3:56338623-56338642 None:intergenic 30.0%
!!! GGATTGTTTTAATCAGTGAA+AGG - chr3_3:56339047-56339066 Msa0459680:intron 30.0%
AAAAAAAAACTTCTCAGGGT+AGG + chr3_3:56339097-56339116 None:intergenic 30.0%
AAATTCCAAATAGCAAGTGA+TGG + chr3_3:56339195-56339214 None:intergenic 30.0%
!! ATCACTTGCTATTTGGAATT+TGG - chr3_3:56339194-56339213 Msa0459680:intron 30.0%
AACATAGTTTCAGACGTAAT+AGG + chr3_3:56339316-56339335 None:intergenic 30.0%
! TTTAAAACTGCCATAGTTGT+CGG - chr3_3:56339465-56339484 Msa0459680:intron 30.0%
! TTTTCTTTCTTGTGATAGCT+TGG - chr3_3:56339531-56339550 Msa0459680:intron 30.0%
ACACACAAAGACTTATATCA+TGG + chr3_3:56339629-56339648 None:intergenic 30.0%
TATAACACTATCAGCCTATT+GGG + chr3_3:56339747-56339766 None:intergenic 30.0%
ATATAACACTATCAGCCTAT+TGG + chr3_3:56339748-56339767 None:intergenic 30.0%
! CAACATAAGAAATTCTAGAG+AGG + chr3_3:56339992-56340011 None:intergenic 30.0%
! TTCTTATGTTGTTCTAGATG+AGG - chr3_3:56340001-56340020 Msa0459680:intron 30.0%
GCTATCAACATTATTGAACT+TGG - chr3_3:56340218-56340237 Msa0459680:intron 30.0%
AAATCCTGTTAGACTATTGT+TGG + chr3_3:56340252-56340271 None:intergenic 30.0%
! CAATAGTCTAACAGGATTTT+TGG - chr3_3:56340253-56340272 Msa0459680:intron 30.0%
!!! GGATTTTTGGTTATGACTTA+TGG - chr3_3:56340266-56340285 Msa0459680:intron 30.0%
! TACCTTCTATAACAGGTTTT+TGG - chr3_3:56340343-56340362 Msa0459680:intron 30.0%
ATCCAAAAACCTGTTATAGA+AGG + chr3_3:56340348-56340367 None:intergenic 30.0%
!! CACTTTAAAATGAGATGGAA+TGG + chr3_3:56340673-56340692 None:intergenic 30.0%
!! GTTAGCACTTTAAAATGAGA+TGG + chr3_3:56340678-56340697 None:intergenic 30.0%
ATGAAAGAAAAAAGAGAAGC+TGG - chr3_3:56340756-56340775 Msa0459680:intron 30.0%
TATAGCAGGTAAAAGTGAAA+GGG - chr3_3:56341008-56341027 Msa0459680:intron 30.0%
ATAAGACGCATTTAAGTCAT+GGG + chr3_3:56341075-56341094 None:intergenic 30.0%
AATAAGACGCATTTAAGTCA+TGG + chr3_3:56341076-56341095 None:intergenic 30.0%
GTTTGTGAAACATTAGTTGT+TGG + chr3_3:56341791-56341810 None:intergenic 30.0%
GTGATAGCTACAAATATTCA+AGG + chr3_3:56341919-56341938 None:intergenic 30.0%
TCAACAAACACAATTGTCAA+CGG + chr3_3:56342374-56342393 None:intergenic 30.0%
! AATTGTGTTTGTTGAGAGAA+AGG - chr3_3:56342379-56342398 Msa0459680:intron 30.0%
TACTTGCAAGAAATCAAAAG+TGG - chr3_3:56342469-56342488 Msa0459680:intron 30.0%
ACTTGCAAGAAATCAAAAGT+GGG - chr3_3:56342470-56342489 Msa0459680:intron 30.0%
AGAAAGAAAGAACGAGATAT+AGG - chr3_3:56342514-56342533 Msa0459680:intron 30.0%
!! CAAAAGTAGTAGTTTTGCAT+TGG + chr3_3:56342900-56342919 None:intergenic 30.0%
! CAATGCAAAACTACTACTTT+TGG - chr3_3:56342898-56342917 Msa0459680:intron 30.0%
GAGAAACACGATAAAAGAAA+GGG + chr3_3:56342949-56342968 None:intergenic 30.0%
AGAGAAACACGATAAAAGAA+AGG + chr3_3:56342950-56342969 None:intergenic 30.0%
CATAATAGCCTGGTATAATA+TGG + chr3_3:56342981-56343000 None:intergenic 30.0%
AGAAAAATAGCATAATAGCC+TGG + chr3_3:56342991-56343010 None:intergenic 30.0%
! AAAAAGTATGAGTAGCCTTT+CGG - chr3_3:56343059-56343078 Msa0459680:CDS 30.0%
GAAAATATCAATTCTCCGAA+AGG + chr3_3:56343077-56343096 None:intergenic 30.0%
! TTTTTATGTGCATGTAGACA+AGG - chr3_3:56343107-56343126 Msa0459680:CDS 30.0%
CATGAATCATCACAACTAAT+TGG - chr3_3:56343368-56343387 Msa0459680:intron 30.0%
GAATTTCATTTAGCGAACAA+AGG + chr3_3:56343493-56343512 None:intergenic 30.0%
TTCCCTATTTGATTCAACAA+AGG + chr3_3:56343515-56343534 None:intergenic 30.0%
TGGGATAGTTACAAGAAATA+AGG - chr3_3:56343667-56343686 Msa0459680:intron 30.0%
GATTGAGGTTTGTAAATAAG+AGG - chr3_3:56343720-56343739 Msa0459680:intron 30.0%
AGGTTTGTAAATAAGAGGAA+GGG - chr3_3:56343725-56343744 Msa0459680:intron 30.0%
TAGTAAACAGAGAGAGATTT+GGG - chr3_3:56343766-56343785 Msa0459680:intron 30.0%
TGGAAATGAATTGAAAGAGA+TGG - chr3_3:56344221-56344240 Msa0459680:CDS 30.0%
ATGAATTGAAAGAGATGGAA+AGG - chr3_3:56344226-56344245 Msa0459680:CDS 30.0%
TATTCATTATTCTTGCGGTT+TGG - chr3_3:56344344-56344363 Msa0459680:intron 30.0%
CCGTGTACATCTAATTAAAA+AGG - chr3_3:56344598-56344617 Msa0459680:intron 30.0%
CTAGTCATTTGAGAGATATT+TGG + chr3_3:56344700-56344719 None:intergenic 30.0%
TTGGATGGTTAGAAGAATTA+AGG + chr3_3:56344768-56344787 None:intergenic 30.0%
TTAGAGGGAAATAGTTAGTT+GGG + chr3_3:56344792-56344811 None:intergenic 30.0%
AGACAAGACAAATAACACTA+TGG - chr3_3:56344823-56344842 Msa0459680:intron 30.0%
!! GGAATTTCTAGCTAAAAGTT+TGG - chr3_3:56344940-56344959 Msa0459680:intron 30.0%
! ACACTGATTAATATGGATAG+AGG + chr3_3:56345018-56345037 None:intergenic 30.0%
TTAATTGACAGAAAACTGCT+AGG + chr3_3:56345279-56345298 None:intergenic 30.0%
GAAGATTATATACACCGAAT+TGG - chr3_3:56345359-56345378 Msa0459680:intron 30.0%
ATTATATACACCGAATTGGA+AGG - chr3_3:56345363-56345382 Msa0459680:intron 30.0%
! GTGTTATCCTCTTTTCTTTA+AGG - chr3_3:56345447-56345466 Msa0459680:intron 30.0%
AGTTCCTTGTGTCAAATATA+AGG - chr3_3:56345528-56345547 Msa0459680:intron 30.0%
CTTTCCTTATATTTGACACA+AGG + chr3_3:56345535-56345554 None:intergenic 30.0%
! CATATTAAGGGTATACCAAA+TGG + chr3_3:56345641-56345660 None:intergenic 30.0%
CATTTGGTATACCCTTAATA+TGG - chr3_3:56345639-56345658 Msa0459680:intron 30.0%
TTTGGTATACCCTTAATATG+GGG - chr3_3:56345641-56345660 Msa0459680:intron 30.0%
!! ACTATTAACCCACTTTTCAA+CGG - chr3_3:56345723-56345742 Msa0459680:intron 30.0%
TTTCAACGGAAAACTAGTAA+AGG - chr3_3:56345737-56345756 Msa0459680:intron 30.0%
ATTTAGATTATACCTGCACT+TGG - chr3_3:56345787-56345806 Msa0459680:intron 30.0%
CTGTCATTGATCAAATGTAT+GGG + chr3_3:56346139-56346158 None:intergenic 30.0%
ACTGTCATTGATCAAATGTA+TGG + chr3_3:56346140-56346159 None:intergenic 30.0%
!! TCATCTATAGGTTTGTTGTT+TGG - chr3_3:56346169-56346188 Msa0459680:CDS 30.0%
GGTTAATCTAAATTCTCGAG+AGG + chr3_3:56336623-56336642 None:intergenic 35.0%
TAGAGTGTGATTAGGTGAAT+TGG - chr3_3:56337080-56337099 Msa0459680:CDS 35.0%
TTCAATGTAATCACATGCGT+CGG - chr3_3:56337171-56337190 Msa0459680:intron 35.0%
!! TGTCGGTGCTATATTAGTTT+AGG - chr3_3:56337226-56337245 Msa0459680:intron 35.0%
! GGAAGTTGATTGTGAAGTTA+TGG - chr3_3:56337247-56337266 Msa0459680:intron 35.0%
GATTATGGCATTGTGGTTAT+TGG - chr3_3:56337290-56337309 Msa0459680:intron 35.0%
! TTTATTGGATGTGGAAGTGT+AGG - chr3_3:56337385-56337404 Msa0459680:intron 35.0%
! AAATCGTCAGAGGTGATTTT+TGG - chr3_3:56337478-56337497 Msa0459680:CDS 35.0%
ATTAGAACTCTAGTCTAGTG+TGG + chr3_3:56337747-56337766 None:intergenic 35.0%
TAGAATCCCTACAATAACAG+GGG + chr3_3:56337804-56337823 None:intergenic 35.0%
CTTTGGATGAAAAGTGAAGT+TGG - chr3_3:56337862-56337881 Msa0459680:intron 35.0%
GGTTTCAACAATCTCTCAAT+TGG - chr3_3:56337965-56337984 Msa0459680:CDS 35.0%
AACAATCTCTCAATTGGGAT+GGG - chr3_3:56337971-56337990 Msa0459680:CDS 35.0%
AACAGTCTCTCTCTTGATTA+GGG - chr3_3:56338034-56338053 Msa0459680:intron 35.0%
CATGTATCCACTGAAATAAC+AGG + chr3_3:56338141-56338160 None:intergenic 35.0%
TTATTACGTCCAGATTGAAG+AGG - chr3_3:56338218-56338237 Msa0459680:intron 35.0%
TAACATCAAGATTTAGCCGA+TGG + chr3_3:56338248-56338267 None:intergenic 35.0%
TTTGCATCCAAGTATCATGA+AGG - chr3_3:56338469-56338488 Msa0459680:intron 35.0%
TTGCTTATCATGATTACACC+AGG - chr3_3:56338495-56338514 Msa0459680:intron 35.0%
TTTGTTCATGCAGACTTCAT+TGG - chr3_3:56338642-56338661 Msa0459680:intron 35.0%
CGCTCAACAAATAGAAAAAG+AGG - chr3_3:56338831-56338850 Msa0459680:intron 35.0%
ACATCTATTGACATAGTGCT+TGG - chr3_3:56338990-56339009 Msa0459680:intron 35.0%
CATCTATTGACATAGTGCTT+GGG - chr3_3:56338991-56339010 Msa0459680:intron 35.0%
! AAATAGCAAGTGATGGAGAA+CGG + chr3_3:56339188-56339207 None:intergenic 35.0%
AAGGGGATGATTCATAGAAA+TGG + chr3_3:56339370-56339389 None:intergenic 35.0%
TTAAAAGAGCGACATCAAAG+GGG + chr3_3:56339387-56339406 None:intergenic 35.0%
CTTAAAAGAGCGACATCAAA+GGG + chr3_3:56339388-56339407 None:intergenic 35.0%
ACTTAAAAGAGCGACATCAA+AGG + chr3_3:56339389-56339408 None:intergenic 35.0%
TGGAACTAACATCGAAAAAC+AGG - chr3_3:56339488-56339507 Msa0459680:intron 35.0%
GCTTGGTCAAAAAACAATGA+TGG - chr3_3:56339548-56339567 Msa0459680:intron 35.0%
!! ATGGCTATTCTTTGACTTGT+TGG - chr3_3:56339567-56339586 Msa0459680:intron 35.0%
GCAACCAAGAATTGATATCA+AGG + chr3_3:56339675-56339694 None:intergenic 35.0%
ATATCAATTCTTGGTTGCCT+TGG - chr3_3:56339677-56339696 Msa0459680:intron 35.0%
! ATGTTTCTTTCTGGTCTCTA+TGG - chr3_3:56339880-56339899 Msa0459680:CDS 35.0%
TTCATTGACCACTTACAACA+AGG - chr3_3:56339957-56339976 Msa0459680:intron 35.0%
ACCCATATCAAGCATTCTAT+CGG + chr3_3:56340027-56340046 None:intergenic 35.0%
GAGTTATTCTCTAGTGTGTT+GGG - chr3_3:56340078-56340097 Msa0459680:intron 35.0%
!! GTTGATAGCTGAAGTGAAAA+AGG + chr3_3:56340207-56340226 None:intergenic 35.0%
CAAACCAACAATAGTCTAAC+AGG - chr3_3:56340245-56340264 Msa0459680:intron 35.0%
! TTTTCTTGGGGTGCATATTA+GGG + chr3_3:56340296-56340315 None:intergenic 35.0%
TAATATGCACCCCAAGAAAA+GGG - chr3_3:56340296-56340315 Msa0459680:intron 35.0%
TCAAATTCCATATCCCTATG+CGG - chr3_3:56340495-56340514 Msa0459680:intron 35.0%
!!! TCCCTTTTTTGAGTTGTCAT+GGG + chr3_3:56340583-56340602 None:intergenic 35.0%
!!! TTCCCTTTTTTGAGTTGTCA+TGG + chr3_3:56340584-56340603 None:intergenic 35.0%
TCAATATAGCAAAACAACGG+TGG - chr3_3:56340613-56340632 Msa0459680:intron 35.0%
! ATGGAACTTGGGTGATTTTA+TGG + chr3_3:56340894-56340913 None:intergenic 35.0%
CATCAAGCTAAATGGAACTT+GGG + chr3_3:56340905-56340924 None:intergenic 35.0%
CTATAGCAGGTAAAAGTGAA+AGG - chr3_3:56341007-56341026 Msa0459680:intron 35.0%
TTAAAAAATGGGTACAGTGG+TGG + chr3_3:56341035-56341054 None:intergenic 35.0%
!!! ACCACTGTACCCATTTTTTA+AGG - chr3_3:56341034-56341053 Msa0459680:intron 35.0%
ACCTTAAAAAATGGGTACAG+TGG + chr3_3:56341038-56341057 None:intergenic 35.0%
TTGTGGAAATCAAATTGTGC+TGG + chr3_3:56341481-56341500 None:intergenic 35.0%
TGTTTCACAAACTCTTGTGA+AGG - chr3_3:56341799-56341818 Msa0459680:intron 35.0%
! GAAGGTTTCTGAAAATGAGA+AGG - chr3_3:56341817-56341836 Msa0459680:intron 35.0%
GTGCACATAAAGTAATGATG+TGG - chr3_3:56342065-56342084 Msa0459680:intron 35.0%
ATGTGGATAGAAAGCAAGAT+GGG - chr3_3:56342082-56342101 Msa0459680:intron 35.0%
CTACAAGCAAATCTAGAAGT+CGG + chr3_3:56342313-56342332 None:intergenic 35.0%
! ACTTCTAGATTTGCTTGTAG+AGG - chr3_3:56342313-56342332 Msa0459680:intron 35.0%
AACACAATTGTCAACGGAAA+TGG + chr3_3:56342368-56342387 None:intergenic 35.0%
CAAAAGTGGGTAGTTTGATA+TGG - chr3_3:56342483-56342502 Msa0459680:intron 35.0%
!! AACAAATAGAAGTGCTGAGA+TGG - chr3_3:56342604-56342623 Msa0459680:intron 35.0%
!! ACCAAGGGTATTATTTGTGA+GGG - chr3_3:56342708-56342727 Msa0459680:intron 35.0%
GTTATGCGTAACAAGTGTTA+AGG + chr3_3:56342927-56342946 None:intergenic 35.0%
GTTTCCATCCATATTATACC+AGG - chr3_3:56342970-56342989 Msa0459680:intron 35.0%
ATAGCCTGGTATAATATGGA+TGG + chr3_3:56342977-56342996 None:intergenic 35.0%
GAGAACTACAGAACTTTCAA+GGG + chr3_3:56343335-56343354 None:intergenic 35.0%
AGAGAACTACAGAACTTTCA+AGG + chr3_3:56343336-56343355 None:intergenic 35.0%
AAATATAGTGAAGCCAGACT+TGG - chr3_3:56343455-56343474 Msa0459680:intron 35.0%
TCTTTAGTGGTAGAGTTTGT+TGG - chr3_3:56343642-56343661 Msa0459680:intron 35.0%
! ATGTTGCTTGTAGATAGGAT+AGG - chr3_3:56343691-56343710 Msa0459680:intron 35.0%
GAGGTTTGTAAATAAGAGGA+AGG - chr3_3:56343724-56343743 Msa0459680:intron 35.0%
CTAGTAAACAGAGAGAGATT+TGG - chr3_3:56343765-56343784 Msa0459680:intron 35.0%
GAATTGTTGAAGAACTTCCA+GGG + chr3_3:56343815-56343834 None:intergenic 35.0%
TGAATTGTTGAAGAACTTCC+AGG + chr3_3:56343816-56343835 None:intergenic 35.0%
GGAGAAAACAAATTCATCAC+TGG - chr3_3:56344201-56344220 Msa0459680:intron 35.0%
GGAATTATAATCGAACCTGA+TGG - chr3_3:56344247-56344266 Msa0459680:CDS 35.0%
!! ATTATTCTTGCGGTTTGGTT+TGG - chr3_3:56344349-56344368 Msa0459680:intron 35.0%
!!! TTGGTTTGCGGTTTTTCTAT+TGG - chr3_3:56344491-56344510 Msa0459680:CDS 35.0%
!! TGGTTTGCGGTTTTTCTATT+GGG - chr3_3:56344492-56344511 Msa0459680:CDS 35.0%
!!! GTTTTTCTATTGGGTTGGTT+CGG - chr3_3:56344501-56344520 Msa0459680:CDS 35.0%
CGGTTTCTATCAACTAGTAT+CGG + chr3_3:56344581-56344600 None:intergenic 35.0%
GCATGTTAGTATCTGTATTC+AGG + chr3_3:56344633-56344652 None:intergenic 35.0%
ACTAACATGCAGAACTTCTA+TGG - chr3_3:56344643-56344662 Msa0459680:intron 35.0%
AATAGTTAGTTGGGTTTGGA+TGG + chr3_3:56344783-56344802 None:intergenic 35.0%
GTTAGAGGGAAATAGTTAGT+TGG + chr3_3:56344793-56344812 None:intergenic 35.0%
AACTATTTCCCTCTAACAGT+TGG - chr3_3:56344796-56344815 Msa0459680:CDS 35.0%
!!! TGTGCATTCTTTTTTGCTTC+AGG - chr3_3:56344919-56344938 Msa0459680:intron 35.0%
CATCAATCTTGATCTTCCAA+AGG - chr3_3:56345105-56345124 Msa0459680:intron 35.0%
TAGAATTGCAGATGTACCTT+TGG + chr3_3:56345124-56345143 None:intergenic 35.0%
! TTCAGGTATTGCATTTATCG+AGG + chr3_3:56345305-56345324 None:intergenic 35.0%
AATACCTGAAGCTTCAGTTA+TGG - chr3_3:56345315-56345334 Msa0459680:intron 35.0%
TCTTCTGTGGTCTATAATTG+AGG + chr3_3:56345344-56345363 None:intergenic 35.0%
TCGGTGTATATAATCTTCTG+TGG + chr3_3:56345357-56345376 None:intergenic 35.0%
CATATCACGATCAGTGTAAA+AGG + chr3_3:56345423-56345442 None:intergenic 35.0%
! CTTTTACACTGATCGTGATA+TGG - chr3_3:56345421-56345440 Msa0459680:intron 35.0%
! CTGAACTGTGATTTTTCTCT+TGG - chr3_3:56345479-56345498 Msa0459680:intron 35.0%
!! CTAGTTTTCCGTTGAAAAGT+GGG + chr3_3:56345734-56345753 None:intergenic 35.0%
!!! ACTAGTTTTCCGTTGAAAAG+TGG + chr3_3:56345735-56345754 None:intergenic 35.0%
AGTGTTAAGATTTGTGTCCT+AGG - chr3_3:56345831-56345850 Msa0459680:intron 35.0%
ATTGCTTTATCGAAACACCT+TGG - chr3_3:56345993-56346012 Msa0459680:intron 35.0%
TCATTGATCAAATGTATGGG+AGG + chr3_3:56346136-56346155 None:intergenic 35.0%
AGTTGCTAACTGTCATCTAT+AGG - chr3_3:56346157-56346176 Msa0459680:CDS 35.0%
AATTTGTAGAGTCGTCATGT+AGG - chr3_3:56346285-56346304 Msa0459680:CDS 35.0%
! AGGAACATACGACATCGTTT+TGG + chr3_3:56336644-56336663 None:intergenic 40.0%
AATGTGAGTTTGAGAATGCG+AGG + chr3_3:56336762-56336781 None:intergenic 40.0%
! ATTGAAGAGAGAAGGAGTGT+TGG + chr3_3:56336785-56336804 None:intergenic 40.0%
CATTTAGGGAAGACAGTATC+AGG + chr3_3:56336862-56336881 None:intergenic 40.0%
CTGATACTGTCTTCCCTAAA+TGG - chr3_3:56336860-56336879 Msa0459680:three_prime_UTR 40.0%
! GTTCAGAAGGTTGCCATTTA+GGG + chr3_3:56336876-56336895 None:intergenic 40.0%
AATGAAGTGTAACCTGGTCA+GGG + chr3_3:56336915-56336934 None:intergenic 40.0%
AAATGAAGTGTAACCTGGTC+AGG + chr3_3:56336916-56336935 None:intergenic 40.0%
!! GAGTTTGTTACTTTGGGTGT+AGG - chr3_3:56337427-56337446 Msa0459680:intron 40.0%
TAAGCAGGTTAAATCGTCAG+AGG - chr3_3:56337468-56337487 Msa0459680:CDS 40.0%
!!! TGATTTTTGGTTGCTGTGTG+TGG - chr3_3:56337491-56337510 Msa0459680:CDS 40.0%
ACTGTGACTCATTCTTCAGA+GGG - chr3_3:56337520-56337539 Msa0459680:intron 40.0%
TTGTCAAATAGCGGCTATAG+TGG - chr3_3:56337649-56337668 Msa0459680:CDS 40.0%
ATTCACACCCCTGTTATTGT+AGG - chr3_3:56337794-56337813 Msa0459680:intron 40.0%
TTCACACCCCTGTTATTGTA+GGG - chr3_3:56337795-56337814 Msa0459680:intron 40.0%
CAACAATCTCTCAATTGGGA+TGG - chr3_3:56337970-56337989 Msa0459680:CDS 40.0%
CAACAGTCTCTCTCTTGATT+AGG - chr3_3:56338033-56338052 Msa0459680:intron 40.0%
ACAGTCTCTCTCTTGATTAG+GGG - chr3_3:56338035-56338054 Msa0459680:intron 40.0%
TGATACTTGGATGCAAACAC+TGG + chr3_3:56338466-56338485 None:intergenic 40.0%
GCAATGTCCTTCATGATACT+TGG + chr3_3:56338479-56338498 None:intergenic 40.0%
! TGTTTTATGTGCAGGCATCA+TGG - chr3_3:56338864-56338883 Msa0459680:intron 40.0%
AAGCTCAGCATCACAAAAGA+TGG + chr3_3:56339163-56339182 None:intergenic 40.0%
!! GTTCTCCATCACTTGCTATT+TGG - chr3_3:56339187-56339206 Msa0459680:intron 40.0%
AAGGATGCAACGAAATGCAT+TGG + chr3_3:56339344-56339363 None:intergenic 40.0%
!!! ATGTTGTTTTGACTTTCGGC+AGG - chr3_3:56339413-56339432 Msa0459680:intron 40.0%
ACAAATTGATCCCATGTCCA+AGG + chr3_3:56339697-56339716 None:intergenic 40.0%
TCAGCATCTGTCTACAAACT+AGG + chr3_3:56339777-56339796 None:intergenic 40.0%
! AAGTGTTGCCTTGTTGTAAG+TGG + chr3_3:56339968-56339987 None:intergenic 40.0%
GCCGATAGAATGCTTGATAT+GGG - chr3_3:56340023-56340042 Msa0459680:intron 40.0%
GGAGTTATTCTCTAGTGTGT+TGG - chr3_3:56340077-56340096 Msa0459680:intron 40.0%
TTTCTTGGGGTGCATATTAG+GGG + chr3_3:56340295-56340314 None:intergenic 40.0%
! CTTTTCTTGGGGTGCATATT+AGG + chr3_3:56340297-56340316 None:intergenic 40.0%
CTAATATGCACCCCAAGAAA+AGG - chr3_3:56340295-56340314 Msa0459680:intron 40.0%
GTTTCTTGGAAGATAGCTGA+GGG + chr3_3:56340442-56340461 None:intergenic 40.0%
TGTTTCTTGGAAGATAGCTG+AGG + chr3_3:56340443-56340462 None:intergenic 40.0%
CAAATTCCATATCCCTATGC+GGG - chr3_3:56340496-56340515 Msa0459680:intron 40.0%
!!! TTTTGAGTTGTCATGGGGAA+AGG + chr3_3:56340577-56340596 None:intergenic 40.0%
TCCCCATGACAACTCAAAAA+AGG - chr3_3:56340578-56340597 Msa0459680:intron 40.0%
!!! CCCTTTTTTGAGTTGTCATG+GGG + chr3_3:56340582-56340601 None:intergenic 40.0%
CCCCATGACAACTCAAAAAA+GGG - chr3_3:56340579-56340598 Msa0459680:intron 40.0%
TTGAGCACAGAAAGTTAACC+AGG - chr3_3:56340836-56340855 Msa0459680:intron 40.0%
! ACCAGGTTAGTTCATTACAG+AGG - chr3_3:56340853-56340872 Msa0459680:intron 40.0%
TCCTCTGTAATGAACTAACC+TGG + chr3_3:56340857-56340876 None:intergenic 40.0%
GCATCAAGCTAAATGGAACT+TGG + chr3_3:56340906-56340925 None:intergenic 40.0%
!! GTTCCATTTAGCTTGATGCA+AGG - chr3_3:56340907-56340926 Msa0459680:intron 40.0%
ATGCCTTGCATCAAGCTAAA+TGG + chr3_3:56340913-56340932 None:intergenic 40.0%
!! TCACTTTTACCTGCTATAGC+AGG + chr3_3:56341006-56341025 None:intergenic 40.0%
AGTAGTGTTTGATGCTTCTC+GGG + chr3_3:56341307-56341326 None:intergenic 40.0%
CAGTAGTGTTTGATGCTTCT+CGG + chr3_3:56341308-56341327 None:intergenic 40.0%
!!! TTTTCCCACCTTAACTTGCA+CGG + chr3_3:56341759-56341778 None:intergenic 40.0%
!! TACCACTTGCTCTAGAAACA+AGG + chr3_3:56341991-56342010 None:intergenic 40.0%
GATGTGGATAGAAAGCAAGA+TGG - chr3_3:56342081-56342100 Msa0459680:intron 40.0%
! TCTAGATTTGCTTGTAGAGG+AGG - chr3_3:56342316-56342335 Msa0459680:intron 40.0%
TGATACAAACTGTGGGAAAC+AGG - chr3_3:56342542-56342561 Msa0459680:intron 40.0%
GATACAAACTGTGGGAAACA+GGG - chr3_3:56342543-56342562 Msa0459680:intron 40.0%
ATGGTATACCTTCCAAACCA+TGG + chr3_3:56342569-56342588 None:intergenic 40.0%
! TTTGGAAGGTATACCATAGC+AGG - chr3_3:56342572-56342591 Msa0459680:intron 40.0%
! TGTTGTTGTTACACCTGCTA+TGG + chr3_3:56342588-56342607 None:intergenic 40.0%
AGACGGAATGGCATATCATT+AGG - chr3_3:56342635-56342654 Msa0459680:intron 40.0%
!! TTTTAGAGAGAGGTACACCA+AGG - chr3_3:56342692-56342711 Msa0459680:intron 40.0%
! TTTAGAGAGAGGTACACCAA+GGG - chr3_3:56342693-56342712 Msa0459680:intron 40.0%
!! CACCAAGGGTATTATTTGTG+AGG - chr3_3:56342707-56342726 Msa0459680:intron 40.0%
TCCCTCACAAATAATACCCT+TGG + chr3_3:56342712-56342731 None:intergenic 40.0%
ATTTGTGAGGGAAACCGTTT+AGG - chr3_3:56342720-56342739 Msa0459680:intron 40.0%
ATAGAAAACTCTACCAGCCA+AGG + chr3_3:56342746-56342765 None:intergenic 40.0%
!! AAATGCTAAAGAGTGCCCTT+AGG - chr3_3:56342789-56342808 Msa0459680:intron 40.0%
!! AATGCTAAAGAGTGCCCTTA+GGG - chr3_3:56342790-56342809 Msa0459680:intron 40.0%
CCTCTTAACCAATACCCTAA+GGG + chr3_3:56342807-56342826 None:intergenic 40.0%
TCCTCTTAACCAATACCCTA+AGG + chr3_3:56342808-56342827 None:intergenic 40.0%
!! TTTTCTGTTCTGAACACACC+AGG - chr3_3:56343005-56343024 Msa0459680:CDS 40.0%
! TTTCTGTTCTGAACACACCA+GGG - chr3_3:56343006-56343025 Msa0459680:CDS 40.0%
! GCTGAAGCATTAATTGCTCA+AGG - chr3_3:56343142-56343161 Msa0459680:intron 40.0%
TTATCTGCAGTTTCTCTGCA+TGG - chr3_3:56343166-56343185 Msa0459680:intron 40.0%
! GAGTAGCTCAACAAGCATTT+TGG - chr3_3:56343234-56343253 Msa0459680:intron 40.0%
! AAGTCAAGAGTATAGTGCAC+TGG + chr3_3:56343276-56343295 None:intergenic 40.0%
GTACCTTGTTACGTCTTTAG+TGG - chr3_3:56343629-56343648 Msa0459680:intron 40.0%
CTACCACTAAAGACGTAACA+AGG + chr3_3:56343635-56343654 None:intergenic 40.0%
!! AGTGGTAGAGTTTGTTGGAT+TGG - chr3_3:56343647-56343666 Msa0459680:intron 40.0%
!! GTGGTAGAGTTTGTTGGATT+GGG - chr3_3:56343648-56343667 Msa0459680:intron 40.0%
! AAGGCATGTTGCTTGTAGAT+AGG - chr3_3:56343686-56343705 Msa0459680:intron 40.0%
TTGCTTGTAGATAGGATAGG+AGG - chr3_3:56343694-56343713 Msa0459680:intron 40.0%
TAGGATAGGAGGAAAGATTG+AGG - chr3_3:56343705-56343724 Msa0459680:intron 40.0%
TTGCTGAGTCCTCTAAACTA+GGG - chr3_3:56343855-56343874 Msa0459680:intron 40.0%
AGATAGAAAAGCTTGCGGTT+TGG - chr3_3:56343932-56343951 Msa0459680:intron 40.0%
!! TGGTTTGGTTTGGTTTGGTT+TGG + chr3_3:56343987-56344006 None:intergenic 40.0%
CAAACCAAACCAAACCAATG+CGG - chr3_3:56343990-56344009 Msa0459680:intron 40.0%
!! GATTGGTTTGGTTTGGTTTG+CGG - chr3_3:56344479-56344498 Msa0459680:CDS 40.0%
! TTGCGGTTTTTCTATTGGGT+TGG - chr3_3:56344496-56344515 Msa0459680:CDS 40.0%
GATAAACTGTTCAGACGTAG+GGG + chr3_3:56344536-56344555 None:intergenic 40.0%
GGATAAACTGTTCAGACGTA+GGG + chr3_3:56344537-56344556 None:intergenic 40.0%
!! TGAGAGATATTTGGTGCCTT+CGG + chr3_3:56344691-56344710 None:intergenic 40.0%
GGGAAATAGTTAGTTGGGTT+TGG + chr3_3:56344787-56344806 None:intergenic 40.0%
ATCAGTGTACTGTATCATGC+AGG - chr3_3:56345030-56345049 Msa0459680:intron 40.0%
ATCACGATCAGTGTAAAAGG+AGG + chr3_3:56345420-56345439 None:intergenic 40.0%
TGGGATATTTGTGGTCCATT+TGG - chr3_3:56345623-56345642 Msa0459680:intron 40.0%
TACTAATCTAGACCAAGTGC+AGG + chr3_3:56345802-56345821 None:intergenic 40.0%
TTTATCGAAACACCTTGGAC+CGG - chr3_3:56345998-56346017 Msa0459680:intron 40.0%
ATGTTAATTGAAGCAGCTCC+CGG + chr3_3:56346020-56346039 None:intergenic 40.0%
ATTGCTGCCTCAAACAGTAA+AGG - chr3_3:56346062-56346081 Msa0459680:intron 40.0%
!! GTTTGTTGTTTGGCAGATAC+TGG - chr3_3:56346179-56346198 Msa0459680:CDS 40.0%
CGACTCTACAAATTGTGTCT+AGG + chr3_3:56346279-56346298 None:intergenic 40.0%
GAAAGGTAGTGAGAGTGAAG+AGG + chr3_3:56336558-56336577 None:intergenic 45.0%
! ATGCGAGGTTGTTGTTGTGA+TGG + chr3_3:56336747-56336766 None:intergenic 45.0%
AGGGAAGACAGTATCAGGAA+CGG + chr3_3:56336857-56336876 None:intergenic 45.0%
! CGTTCAGAAGGTTGCCATTT+AGG + chr3_3:56336877-56336896 None:intergenic 45.0%
AATACGCTGCGAATGCATCA+AGG + chr3_3:56337009-56337028 None:intergenic 45.0%
TTGGTTGCTGTGTGTGGAAA+TGG - chr3_3:56337497-56337516 Msa0459680:CDS 45.0%
GACTGTGACTCATTCTTCAG+AGG - chr3_3:56337519-56337538 Msa0459680:intron 45.0%
GACTCATTCTTCAGAGGGTT+AGG - chr3_3:56337525-56337544 Msa0459680:intron 45.0%
GCTGTAACATTACTGCGTAG+TGG - chr3_3:56337673-56337692 Msa0459680:CDS 45.0%
! GTGGTGAGTGTTGTCAATCA+CGG + chr3_3:56337728-56337747 None:intergenic 45.0%
! CAGGGGTGTGAATTTCTCTT+TGG + chr3_3:56337787-56337806 None:intergenic 45.0%
TCCAACACTGTGGTTTACCA+AGG - chr3_3:56337886-56337905 Msa0459680:intron 45.0%
TCCTTGGTAAACCACAGTGT+TGG + chr3_3:56337890-56337909 None:intergenic 45.0%
AATCTCTCAATTGGGATGGG+TGG - chr3_3:56337974-56337993 Msa0459680:CDS 45.0%
CATCAAGATTTAGCCGATGG+CGG + chr3_3:56338245-56338264 None:intergenic 45.0%
! TCTCAGTGGAAGGGATCTTT+TGG - chr3_3:56338553-56338572 Msa0459680:intron 45.0%
! CTCAGTGGAAGGGATCTTTT+GGG - chr3_3:56338554-56338573 Msa0459680:intron 45.0%
!!! CTTTTGGGTTGTGCTGAAAC+TGG - chr3_3:56338569-56338588 Msa0459680:intron 45.0%
!! TGGTCCCTTGGCATTAGTTT+TGG - chr3_3:56338792-56338811 Msa0459680:intron 45.0%
GGAGCCAAAACTAATGCCAA+GGG + chr3_3:56338799-56338818 None:intergenic 45.0%
AGGAGCCAAAACTAATGCCA+AGG + chr3_3:56338800-56338819 None:intergenic 45.0%
TGTTGAGCGAGTTCTCTAGT+AGG + chr3_3:56338820-56338839 None:intergenic 45.0%
CAGGCATCATGGTTTATGTG+AGG - chr3_3:56338875-56338894 Msa0459680:intron 45.0%
TTCTCAGGGTAGGTTCATAG+GGG + chr3_3:56339087-56339106 None:intergenic 45.0%
CTTCTCAGGGTAGGTTCATA+GGG + chr3_3:56339088-56339107 None:intergenic 45.0%
ACTTCTCAGGGTAGGTTCAT+AGG + chr3_3:56339089-56339108 None:intergenic 45.0%
CGAGAGATCTGCTAAAAGCT+TGG + chr3_3:56339440-56339459 None:intergenic 45.0%
AAAACTGCCATAGTTGTCGG+TGG - chr3_3:56339468-56339487 Msa0459680:intron 45.0%
GTTAGTTCCACCGACAACTA+TGG + chr3_3:56339478-56339497 None:intergenic 45.0%
ATTCTTGGTTGCCTTGGACA+TGG - chr3_3:56339683-56339702 Msa0459680:intron 45.0%
TTCTTGGTTGCCTTGGACAT+GGG - chr3_3:56339684-56339703 Msa0459680:intron 45.0%
! TGACAGCTAGTTCTCCCAAT+AGG - chr3_3:56339730-56339749 Msa0459680:intron 45.0%
CATCTGTCTACAAACTAGGC+TGG + chr3_3:56339773-56339792 None:intergenic 45.0%
!! GGCAACTGCTATTTCAACTC+CGG + chr3_3:56339925-56339944 None:intergenic 45.0%
AGTGGTCAATGAACCTTCCA+GGG + chr3_3:56339950-56339969 None:intergenic 45.0%
AAGTGGTCAATGAACCTTCC+AGG + chr3_3:56339951-56339970 None:intergenic 45.0%
GGCCGATAGAATGCTTGATA+TGG - chr3_3:56340022-56340041 Msa0459680:intron 45.0%
!!! TGGGTTTTGAACCGCAGATA+AGG - chr3_3:56340042-56340061 Msa0459680:intron 45.0%
!!! GGGTTTTGAACCGCAGATAA+GGG - chr3_3:56340043-56340062 Msa0459680:intron 45.0%
! TTTTGAACCGCAGATAAGGG+AGG - chr3_3:56340046-56340065 Msa0459680:intron 45.0%
ACACTAACCTCCCTTATCTG+CGG + chr3_3:56340056-56340075 None:intergenic 45.0%
CAGATAAGGGAGGTTAGTGT+TGG - chr3_3:56340056-56340075 Msa0459680:intron 45.0%
! ACAACTGCACCCTTTTCTTG+GGG + chr3_3:56340308-56340327 None:intergenic 45.0%
! CACAACTGCACCCTTTTCTT+GGG + chr3_3:56340309-56340328 None:intergenic 45.0%
AAGATAGCTGAGGGAGAAGT+GGG + chr3_3:56340433-56340452 None:intergenic 45.0%
GTTGTCATGGGGAAAGGATA+TGG + chr3_3:56340571-56340590 None:intergenic 45.0%
! TCTGAGACTGACTCTGTTGA+TGG + chr3_3:56340938-56340957 None:intergenic 45.0%
GTGGAATAACCTGCTATAGC+AGG - chr3_3:56340994-56341013 Msa0459680:intron 45.0%
GCACAAAGGAAAACTGACCT+TGG + chr3_3:56341368-56341387 None:intergenic 45.0%
! GGTCAGTTTTCCTTTGTGCT+TGG - chr3_3:56341369-56341388 Msa0459680:intron 45.0%
!! TTTCCCACCTTAACTTGCAC+GGG + chr3_3:56341758-56341777 None:intergenic 45.0%
!! CTCCTTGTTTCTAGAGCAAG+TGG - chr3_3:56341986-56342005 Msa0459680:intron 45.0%
GCACATATACGACAAGCCTA+AGG + chr3_3:56342448-56342467 None:intergenic 45.0%
TTCCCACAGTTTGTATCAGC+TGG + chr3_3:56342540-56342559 None:intergenic 45.0%
!! AATAGAAGTGCTGAGATGGC+AGG - chr3_3:56342608-56342627 Msa0459680:intron 45.0%
!! AAAGAGTGCCCTTAGGGTAT+TGG - chr3_3:56342796-56342815 Msa0459680:intron 45.0%
!! CCCTTAGGGTATTGGTTAAG+AGG - chr3_3:56342804-56342823 Msa0459680:intron 45.0%
! AGGCTGCCTTGCATGATTTT+CGG - chr3_3:56343212-56343231 Msa0459680:intron 45.0%
GCTACTCCGAAAATCATGCA+AGG + chr3_3:56343221-56343240 None:intergenic 45.0%
! ATAGTGCACTGGTAGAGTAG+AGG + chr3_3:56343265-56343284 None:intergenic 45.0%
! TTGAAGAGTGCAGTTAAGCC+AGG - chr3_3:56343420-56343439 Msa0459680:intron 45.0%
!!! ATATTTTGACAAGCGACGCC+TGG + chr3_3:56343441-56343460 None:intergenic 45.0%
AGAGAGAGATTTGGGCCTTT+GGG - chr3_3:56343774-56343793 Msa0459680:intron 45.0%
GACTCAGCAAGAAAGAAGAC+AGG + chr3_3:56343845-56343864 None:intergenic 45.0%
CTTGCTGAGTCCTCTAAACT+AGG - chr3_3:56343854-56343873 Msa0459680:intron 45.0%
TGCTGAGTCCTCTAAACTAG+GGG - chr3_3:56343856-56343875 Msa0459680:intron 45.0%
! AGCTTTTCTATCTCGCGGTT+TGG + chr3_3:56343925-56343944 None:intergenic 45.0%
!! GAAAAGCTTGCGGTTTGGTT+TGG - chr3_3:56343937-56343956 Msa0459680:intron 45.0%
!! CGCATTGGTTTGGTTTGGTT+TGG + chr3_3:56343992-56344011 None:intergenic 45.0%
!! CAAACCGCATTGGTTTGGTT+TGG + chr3_3:56343997-56344016 None:intergenic 45.0%
CAAACCAAACCAATGCGGTT+TGG - chr3_3:56343995-56344014 Msa0459680:intron 45.0%
!! CAATCCAAACCGCATTGGTT+TGG + chr3_3:56344002-56344021 None:intergenic 45.0%
! CAAACCAATGCGGTTTGGAT+TGG - chr3_3:56344000-56344019 Msa0459680:intron 45.0%
!! CAATGCGGTTTGGATTGGTT+CGG - chr3_3:56344005-56344024 Msa0459680:intron 45.0%
!! TTGGATTGGTTCGGTTTGTG+CGG - chr3_3:56344014-56344033 Msa0459680:intron 45.0%
! TTTTCCATCGTTGCACCATC+AGG + chr3_3:56344265-56344284 None:intergenic 45.0%
!! TCTTGCGGTTTGGTTTGGTT+CGG - chr3_3:56344354-56344373 Msa0459680:intron 45.0%
!! GCACTTGGTTCGGATGAATT+CGG + chr3_3:56344437-56344456 None:intergenic 45.0%
GAATTCATCCGAACCAAGTG+CGG - chr3_3:56344436-56344455 Msa0459680:CDS 45.0%
GCAAAAAACCGCACTTGGTT+CGG + chr3_3:56344447-56344466 None:intergenic 45.0%
!!! GAACCAAGTGCGGTTTTTTG+CGG - chr3_3:56344446-56344465 Msa0459680:CDS 45.0%
AAACCGCAAAAAACCGCACT+TGG + chr3_3:56344452-56344471 None:intergenic 45.0%
!!! AGTGCGGTTTTTTGCGGTTT+CGG - chr3_3:56344452-56344471 Msa0459680:CDS 45.0%
!!! GGTTTTTTGCGGTTTCGGTT+TGG - chr3_3:56344457-56344476 Msa0459680:CDS 45.0%
!! TTTGCGGTTTCGGTTTGGAT+TGG - chr3_3:56344462-56344481 Msa0459680:CDS 45.0%
!! GGTTTCGGTTTGGATTGGTT+TGG - chr3_3:56344467-56344486 Msa0459680:CDS 45.0%
!! CGGTTTGGATTGGTTTGGTT+TGG - chr3_3:56344472-56344491 Msa0459680:CDS 45.0%
GGGATAAACTGTTCAGACGT+AGG + chr3_3:56344538-56344557 None:intergenic 45.0%
TATCCCACTGCTCCATGATT+TGG - chr3_3:56344552-56344571 Msa0459680:CDS 45.0%
ATCCCACTGCTCCATGATTT+GGG - chr3_3:56344553-56344572 Msa0459680:CDS 45.0%
! TAGTATCGGAGCCCAAATCA+TGG + chr3_3:56344567-56344586 None:intergenic 45.0%
!! GAGAGATATTTGGTGCCTTC+GGG + chr3_3:56344690-56344709 None:intergenic 45.0%
GTCTGTTGCCAACTGTTAGA+GGG + chr3_3:56344807-56344826 None:intergenic 45.0%
TGTCTGTTGCCAACTGTTAG+AGG + chr3_3:56344808-56344827 None:intergenic 45.0%
CATGCAAACAATGCAGAGCA+TGG + chr3_3:56344861-56344880 None:intergenic 45.0%
! GGAGATTTTCCACAAGTCAG+TGG - chr3_3:56345216-56345235 Msa0459680:intron 45.0%
!! AATGGCAATCCACTGACTTG+TGG + chr3_3:56345228-56345247 None:intergenic 45.0%
ATACACCGAATTGGAAGGAC+AGG - chr3_3:56345368-56345387 Msa0459680:intron 45.0%
TACACCGAATTGGAAGGACA+GGG - chr3_3:56345369-56345388 Msa0459680:intron 45.0%
ACGATCAGTGTAAAAGGAGG+TGG + chr3_3:56345417-56345436 None:intergenic 45.0%
CCATAGCTGATGCTGAATCT+GGG - chr3_3:56345555-56345574 Msa0459680:intron 45.0%
!! AGGTACTGTTTCTGCTCTTC+TGG - chr3_3:56345603-56345622 Msa0459680:intron 45.0%
!! GGTACTGTTTCTGCTCTTCT+GGG - chr3_3:56345604-56345623 Msa0459680:intron 45.0%
!! CTGCTCTTCTGGGATATTTG+TGG - chr3_3:56345614-56345633 Msa0459680:intron 45.0%
TTGGGAGAAATTGAGCACCT+AGG + chr3_3:56345851-56345870 None:intergenic 45.0%
TTGCATTCTAGGTTGCCAGA+AGG - chr3_3:56345931-56345950 Msa0459680:intron 45.0%
ATTCTAGGTTGCCAGAAGGA+AGG - chr3_3:56345935-56345954 Msa0459680:intron 45.0%
TGCTTCTTTCTCCTTCCTTC+TGG + chr3_3:56345949-56345968 None:intergenic 45.0%
TTATCGAAACACCTTGGACC+GGG - chr3_3:56345999-56346018 Msa0459680:intron 45.0%
TGCCTCAAACAGTAAAGGAG+AGG - chr3_3:56346067-56346086 Msa0459680:intron 45.0%
GCCTCAAACAGTAAAGGAGA+GGG - chr3_3:56346068-56346087 Msa0459680:intron 45.0%
TGTTTGGCAGATACTGGAGA+TGG - chr3_3:56346185-56346204 Msa0459680:CDS 45.0%
CGTACTGTTTCACACGTTGT+AGG - chr3_3:56346225-56346244 Msa0459680:CDS 45.0%
!! TATAAATATGATTAAATAAT+TGG + chr3_3:56338340-56338359 None:intergenic 5.0%
AGGTAGTGAGAGTGAAGAGG+TGG + chr3_3:56336555-56336574 None:intergenic 50.0%
TCCTCCACACTTGAGAAACG+CGG - chr3_3:56336660-56336679 Msa0459680:three_prime_UTR 50.0%
!! TGTTGTTGTGATGGTGGTGG+TGG + chr3_3:56336738-56336757 None:intergenic 50.0%
!! GGTTGTTGTTGTGATGGTGG+TGG + chr3_3:56336741-56336760 None:intergenic 50.0%
! CGAGGTTGTTGTTGTGATGG+TGG + chr3_3:56336744-56336763 None:intergenic 50.0%
!! CGAGAGGCATTGAAGAGAGA+AGG + chr3_3:56336793-56336812 None:intergenic 50.0%
GAAGACAGTATCAGGAACGG+CGG + chr3_3:56336854-56336873 None:intergenic 50.0%
ATGCGAGAAACGCGTTCAGA+AGG + chr3_3:56336889-56336908 None:intergenic 50.0%
! TGAAGTTGGCTCCAACACTG+TGG - chr3_3:56337876-56337895 Msa0459680:intron 50.0%
TCTCAATTGGGATGGGTGGT+GGG - chr3_3:56337978-56337997 Msa0459680:CDS 50.0%
AGATTGAAGAGGTCCGCCAT+CGG - chr3_3:56338229-56338248 Msa0459680:intron 50.0%
TCCACTGAGAGCAATAGGCA+TGG + chr3_3:56338543-56338562 None:intergenic 50.0%
TGCCTATTGCTCTCAGTGGA+AGG - chr3_3:56338543-56338562 Msa0459680:intron 50.0%
GCCTATTGCTCTCAGTGGAA+GGG - chr3_3:56338544-56338563 Msa0459680:intron 50.0%
TCCCTTCCACTGAGAGCAAT+AGG + chr3_3:56338548-56338567 None:intergenic 50.0%
GGTTGTGCTGAAACTGGTAG+CGG - chr3_3:56338575-56338594 Msa0459680:intron 50.0%
GTTGTGCTGAAACTGGTAGC+GGG - chr3_3:56338576-56338595 Msa0459680:intron 50.0%
TCTCAGGGTAGGTTCATAGG+GGG + chr3_3:56339086-56339105 None:intergenic 50.0%
! CTTTCTGGTCTCTATGGCAG+AGG - chr3_3:56339886-56339905 Msa0459680:CDS 50.0%
CAGAGGTCTGAACTAAGAGC+CGG - chr3_3:56339903-56339922 Msa0459680:CDS 50.0%
GTGGTCAATGAACCTTCCAG+GGG + chr3_3:56339949-56339968 None:intergenic 50.0%
! CCACAACTGCACCCTTTTCT+TGG + chr3_3:56340310-56340329 None:intergenic 50.0%
! CCAAGAAAAGGGTGCAGTTG+TGG - chr3_3:56340307-56340326 Msa0459680:intron 50.0%
GAAGATAGCTGAGGGAGAAG+TGG + chr3_3:56340434-56340453 None:intergenic 50.0%
CAGAATCCCGCATAGGGATA+TGG + chr3_3:56340505-56340524 None:intergenic 50.0%
CATACGCAGAATCCCGCATA+GGG + chr3_3:56340511-56340530 None:intergenic 50.0%
TATGCGGGATTCTGCGTATG+CGG - chr3_3:56340511-56340530 Msa0459680:intron 50.0%
GTTCAGTGCAACTATGCCTG+TGG - chr3_3:56341327-56341346 Msa0459680:intron 50.0%
GACAATGCTTCGATCTCCAC+AGG + chr3_3:56341346-56341365 None:intergenic 50.0%
!! GGAGATCGAAGCATTGTCCA+AGG - chr3_3:56341348-56341367 Msa0459680:intron 50.0%
AACTCAGGAGCCAAGCACAA+AGG + chr3_3:56341382-56341401 None:intergenic 50.0%
!! TTCCCACCTTAACTTGCACG+GGG + chr3_3:56341757-56341776 None:intergenic 50.0%
AGGCCAGCTGATACAAACTG+TGG - chr3_3:56342534-56342553 Msa0459680:intron 50.0%
GGCCAGCTGATACAAACTGT+GGG - chr3_3:56342535-56342554 Msa0459680:intron 50.0%
! AAACAGGGCCATGGTTTGGA+AGG - chr3_3:56342558-56342577 Msa0459680:intron 50.0%
TCTACCAGCCAAGGCCTAAA+CGG + chr3_3:56342737-56342756 None:intergenic 50.0%
AAGGTCTTCAACTTCGACCC+TGG + chr3_3:56343026-56343045 None:intergenic 50.0%
TCTGCAGTTTCTCTGCATGG+CGG - chr3_3:56343169-56343188 Msa0459680:intron 50.0%
CCTCTCTTTCACTCTGACTG+CGG + chr3_3:56343195-56343214 None:intergenic 50.0%
GGAGTACAACAAGCCAAGTC+TGG + chr3_3:56343471-56343490 None:intergenic 50.0%
CAGAGAGAGATTTGGGCCTT+TGG - chr3_3:56343773-56343792 Msa0459680:intron 50.0%
CACGAACACCCCTAGTTTAG+AGG + chr3_3:56343867-56343886 None:intergenic 50.0%
!! CTCTAAACTAGGGGTGTTCG+TGG - chr3_3:56343865-56343884 Msa0459680:intron 50.0%
! CCGCAAGCTTTTCTATCTCG+CGG + chr3_3:56343930-56343949 None:intergenic 50.0%
CCGCGAGATAGAAAAGCTTG+CGG - chr3_3:56343927-56343946 Msa0459680:intron 50.0%
!! GCTTGCGGTTTGGTTTGGTT+CGG - chr3_3:56343942-56343961 Msa0459680:intron 50.0%
CGAACCAATCCAAACCGCAT+TGG + chr3_3:56344007-56344026 None:intergenic 50.0%
!! CGGTTTGGTTTGGTTCGGTT+CGG - chr3_3:56343947-56343966 Msa0459680:intron 50.0%
! GACTTTTGCACTGAACCGCA+CGG + chr3_3:56344412-56344431 None:intergenic 50.0%
AGCCCAAATCATGGAGCAGT+GGG + chr3_3:56344558-56344577 None:intergenic 50.0%
!! TTCGGGCTTTTAGGGAAGAG+GGG + chr3_3:56344673-56344692 None:intergenic 50.0%
!! CTTCGGGCTTTTAGGGAAGA+GGG + chr3_3:56344674-56344693 None:intergenic 50.0%
!! TTGGTGCCTTCGGGCTTTTA+GGG + chr3_3:56344681-56344700 None:intergenic 50.0%
!!! TTTGGTGCCTTCGGGCTTTT+AGG + chr3_3:56344682-56344701 None:intergenic 50.0%
TTGCCACCGATGTTGCATCT+CGG - chr3_3:56345053-56345072 Msa0459680:intron 50.0%
GCCATTCTGCTACTGCTTGT+TGG - chr3_3:56345242-56345261 Msa0459680:intron 50.0%
GCCAACAAGCAGTAGCAGAA+TGG + chr3_3:56345246-56345265 None:intergenic 50.0%
GCAGCCATAACTGAAGCTTC+AGG + chr3_3:56345322-56345341 None:intergenic 50.0%
GCCATAGCTGATGCTGAATC+TGG - chr3_3:56345554-56345573 Msa0459680:intron 50.0%
CCCAGATTCAGCATCAGCTA+TGG + chr3_3:56345558-56345577 None:intergenic 50.0%
! AACGCTGTGGCATTTGCTAC+TGG - chr3_3:56345578-56345597 Msa0459680:intron 50.0%
! ACGCTGTGGCATTTGCTACT+GGG - chr3_3:56345579-56345598 Msa0459680:intron 50.0%
! TGTGGCATTTGCTACTGGGA+AGG - chr3_3:56345583-56345602 Msa0459680:intron 50.0%
GCCCTCTCCTTTACTGTTTG+AGG + chr3_3:56346072-56346091 None:intergenic 50.0%
ACACGTTGTAGGTAGCACAC+TGG - chr3_3:56346236-56346255 Msa0459680:CDS 50.0%
! GTGGTGGTTGTCTAGGGTTC+CGG + chr3_3:56336713-56336732 None:intergenic 55.0%
!! GTGGTGGTGGTGGTTGTCTA+GGG + chr3_3:56336719-56336738 None:intergenic 55.0%
!! TGTTGTGATGGTGGTGGTGG+TGG + chr3_3:56336735-56336754 None:intergenic 55.0%
TTCTCGCATGAACCCTGACC+AGG - chr3_3:56336900-56336919 Msa0459680:three_prime_UTR 55.0%
CTCTCAATTGGGATGGGTGG+TGG - chr3_3:56337977-56337996 Msa0459680:CDS 55.0%
!! AATTGGGATGGGTGGTGGGA+TGG - chr3_3:56337982-56338001 Msa0459680:CDS 55.0%
GCGCTCTTGCTCTTCTGCTT+TGG - chr3_3:56338004-56338023 Msa0459680:intron 55.0%
!! GATGGCGGACCTCTTCAATC+TGG + chr3_3:56338230-56338249 None:intergenic 55.0%
CACCAGGCCAACTTCTATCC+AGG - chr3_3:56338511-56338530 Msa0459680:intron 55.0%
TGCCTGGATAGAAGTTGGCC+TGG + chr3_3:56338516-56338535 None:intergenic 55.0%
GCCAACTTCTATCCAGGCAC+AGG - chr3_3:56338517-56338536 Msa0459680:intron 55.0%
GCCTGTGCCTGGATAGAAGT+TGG + chr3_3:56338521-56338540 None:intergenic 55.0%
GCCATGCCTATTGCTCTCAG+TGG - chr3_3:56338539-56338558 Msa0459680:intron 55.0%
GCTTGGCCCAACCTCCAATT+CGG - chr3_3:56338761-56338780 Msa0459680:intron 55.0%
TCCACGCCGAATTGGAGGTT+GGG + chr3_3:56338770-56338789 None:intergenic 55.0%
TCAGGGTAGGTTCATAGGGG+GGG + chr3_3:56339084-56339103 None:intergenic 55.0%
CTCAGGGTAGGTTCATAGGG+GGG + chr3_3:56339085-56339104 None:intergenic 55.0%
GAAATAGCAGTTGCCACCCC+TGG - chr3_3:56339930-56339949 Msa0459680:intron 55.0%
GTCAATGAACCTTCCAGGGG+TGG + chr3_3:56339946-56339965 None:intergenic 55.0%
GCATACGCAGAATCCCGCAT+AGG + chr3_3:56340512-56340531 None:intergenic 55.0%
ATGCGGGATTCTGCGTATGC+GGG - chr3_3:56340512-56340531 Msa0459680:intron 55.0%
! TATGCGGGAGCTTTGTGCAC+TGG - chr3_3:56340527-56340546 Msa0459680:intron 55.0%
! ATGCGGGAGCTTTGTGCACT+GGG - chr3_3:56340528-56340547 Msa0459680:intron 55.0%
!! GCAGCAGAGCTGCTGATTTG+TGG + chr3_3:56341498-56341517 None:intergenic 55.0%
AGCTAGCCCCGTGCAAGTTA+AGG - chr3_3:56341748-56341767 Msa0459680:CDS 55.0%
TAGCCCCGTGCAAGTTAAGG+TGG - chr3_3:56341751-56341770 Msa0459680:CDS 55.0%
AGCCCCGTGCAAGTTAAGGT+GGG - chr3_3:56341752-56341771 Msa0459680:CDS 55.0%
!! GCTTGTAGAGGAGGCATCAC+AGG - chr3_3:56342325-56342344 Msa0459680:intron 55.0%
AACTGTGGGAAACAGGGCCA+TGG - chr3_3:56342549-56342568 Msa0459680:intron 55.0%
TGGGAAACAGGGCCATGGTT+TGG - chr3_3:56342554-56342573 Msa0459680:intron 55.0%
CTGAGATGGCAGGTGAGAGA+CGG - chr3_3:56342618-56342637 Msa0459680:intron 55.0%
ATGGCAGGTGAGAGACGGAA+TGG - chr3_3:56342623-56342642 Msa0459680:intron 55.0%
GAGGGAAACCGTTTAGGCCT+TGG - chr3_3:56342726-56342745 Msa0459680:intron 55.0%
GAAACCGTTTAGGCCTTGGC+TGG - chr3_3:56342730-56342749 Msa0459680:intron 55.0%
CCGCAGTCAGAGTGAAAGAG+AGG - chr3_3:56343192-56343211 Msa0459680:intron 55.0%
GAGATTTGGGCCTTTGGGCT+AGG - chr3_3:56343779-56343798 Msa0459680:intron 55.0%
!! AACTAGGGGTGTTCGTGGTG+CGG - chr3_3:56343870-56343889 Msa0459680:intron 55.0%
!! GTTCGTGGTGCGGTTTGGTT+CGG - chr3_3:56343880-56343899 Msa0459680:intron 55.0%
! CGAACCTGATGGTGCAACGA+TGG - chr3_3:56344258-56344277 Msa0459680:CDS 55.0%
AAACCGCAAACCGAACCGTG+CGG - chr3_3:56344394-56344413 Msa0459680:intron 55.0%
TTGCACTGAACCGCACGGTT+CGG + chr3_3:56344407-56344426 None:intergenic 55.0%
GAGCCCAAATCATGGAGCAG+TGG + chr3_3:56344559-56344578 None:intergenic 55.0%
!! CCTTCGGGCTTTTAGGGAAG+AGG + chr3_3:56344675-56344694 None:intergenic 55.0%
CCTCTTCCCTAAAAGCCCGA+AGG - chr3_3:56344672-56344691 Msa0459680:intron 55.0%
TGCCACCGATGTTGCATCTC+GGG - chr3_3:56345054-56345073 Msa0459680:intron 55.0%
CAAGCCCCGAGATGCAACAT+CGG + chr3_3:56345062-56345081 None:intergenic 55.0%
CACGCCCTGTCCTTCCAATT+CGG + chr3_3:56345376-56345395 None:intergenic 55.0%
TGCTGAATCTGGGAACGCTG+TGG - chr3_3:56345565-56345584 Msa0459680:intron 55.0%
AGCAGCAGCTGCACACAAAG+AGG - chr3_3:56345965-56345984 Msa0459680:intron 55.0%
! AGGGCACAGCTGATAGTGCA+TGG - chr3_3:56346087-56346106 Msa0459680:intron 55.0%
! GGGCACAGCTGATAGTGCAT+GGG - chr3_3:56346088-56346107 Msa0459680:intron 55.0%
GCCGCGTTTCTCAAGTGTGG+AGG + chr3_3:56336664-56336683 None:intergenic 60.0%
CTCGCCGCGTTTCTCAAGTG+TGG + chr3_3:56336667-56336686 None:intergenic 60.0%
! GTTGTCTAGGGTTCCGGTGG+TGG + chr3_3:56336707-56336726 None:intergenic 60.0%
! GTGGTTGTCTAGGGTTCCGG+TGG + chr3_3:56336710-56336729 None:intergenic 60.0%
!! GGTGGTGGTGGTGGTTGTCT+AGG + chr3_3:56336720-56336739 None:intergenic 60.0%
!! TGTGATGGTGGTGGTGGTGG+TGG + chr3_3:56336732-56336751 None:intergenic 60.0%
TCTATAGGTGCGGGTGCAGC+AGG + chr3_3:56338288-56338307 None:intergenic 60.0%
CAATAGGCATGGCCTGTGCC+TGG + chr3_3:56338532-56338551 None:intergenic 60.0%
CTCCACGCCGAATTGGAGGT+TGG + chr3_3:56338771-56338790 None:intergenic 60.0%
CCATCTCCACGCCGAATTGG+AGG + chr3_3:56338775-56338794 None:intergenic 60.0%
CCTCCAATTCGGCGTGGAGA+TGG - chr3_3:56338772-56338791 Msa0459680:intron 60.0%
GGACCATCTCCACGCCGAAT+TGG + chr3_3:56338778-56338797 None:intergenic 60.0%
TAGCAGTTGCCACCCCTGGA+AGG - chr3_3:56339934-56339953 Msa0459680:intron 60.0%
!! GCTGAGGGAGAAGTGGGTTG+TGG + chr3_3:56340427-56340446 None:intergenic 60.0%
! TTTGGGCCTTTGGGCTAGGC+AGG - chr3_3:56343783-56343802 Msa0459680:intron 60.0%
TCTGCTCCTGCCTAGCCCAA+AGG + chr3_3:56343792-56343811 None:intergenic 60.0%
!! GAACCGCACGGTTCGGTTTG+CGG + chr3_3:56344400-56344419 None:intergenic 60.0%
GCCACCGATGTTGCATCTCG+GGG - chr3_3:56345055-56345074 Msa0459680:intron 60.0%
CGATGTTGCATCTCGGGGCT+TGG - chr3_3:56345060-56345079 Msa0459680:intron 60.0%
TCTCGGGGCTTGGATGTCAC+AGG - chr3_3:56345070-56345089 Msa0459680:intron 60.0%
ATTGGAAGGACAGGGCGTGC+AGG - chr3_3:56345377-56345396 Msa0459680:intron 60.0%
ACAGGGCGTGCAGGATCAAC+TGG - chr3_3:56345386-56345405 Msa0459680:intron 60.0%
TTGAAGCAGCTCCCGGTCCA+AGG + chr3_3:56346013-56346032 None:intergenic 60.0%
ACCACCGTGTCCACCACCAC+CGG - chr3_3:56336691-56336710 Msa0459680:three_prime_UTR 65.0%
!! GGTTCCGGTGGTGGTGGACA+CGG + chr3_3:56336698-56336717 None:intergenic 65.0%
! GTCTAGGGTTCCGGTGGTGG+TGG + chr3_3:56336704-56336723 None:intergenic 65.0%
!! GATGGTGGTGGTGGTGGTGG+TGG + chr3_3:56336729-56336748 None:intergenic 65.0%
AGTCCTCGACGACGGAGGAG+CGG + chr3_3:56336827-56336846 None:intergenic 65.0%
GCGATAGTCCTCGACGACGG+AGG + chr3_3:56336832-56336851 None:intergenic 65.0%
GCGGCGATAGTCCTCGACGA+CGG + chr3_3:56336835-56336854 None:intergenic 65.0%
GCCCAACCTCCAATTCGGCG+TGG - chr3_3:56338766-56338785 Msa0459680:intron 65.0%
TCGGCGTGGAGATGGTCCCT+TGG - chr3_3:56338780-56338799 Msa0459680:intron 65.0%
! GGGGTGTTCGTGGTGCGGTT+TGG - chr3_3:56343875-56343894 Msa0459680:intron 65.0%
GCCCCGAGATGCAACATCGG+TGG + chr3_3:56345059-56345078 None:intergenic 65.0%
!! TCCGGTGGTGGTGGACACGG+TGG + chr3_3:56336695-56336714 None:intergenic 70.0%
ACGGAGGAGCGGCGGAGGTA+CGG + chr3_3:56336816-56336835 None:intergenic 70.0%
GGCTAGGCAGGAGCAGACCC+TGG - chr3_3:56343795-56343814 Msa0459680:intron 70.0%
! AGCGGCGGAGGTACGGCGAG+AGG + chr3_3:56336809-56336828 None:intergenic 75.0%
CCTCGACGACGGAGGAGCGG+CGG + chr3_3:56336824-56336843 None:intergenic 75.0%
! CGACGACGGAGGAGCGGCGG+AGG + chr3_3:56336821-56336840 None:intergenic 80.0%
! CCGCCGCTCCTCCGTCGTCG+AGG - chr3_3:56336821-56336840 Msa0459680:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 56336540 56346525 56336540 ID=Msa0459680;Name=Msa0459680
chr3_3 mRNA 56336540 56346525 56336540 ID=Msa0459680-mRNA-1;Parent=Msa0459680;Name=Msa0459680-mRNA-1;_AED=0.15;_eAED=0.15;_QI=109|1|1|1|1|1|14|407|562
chr3_3 exon 56336540 56337123 56336540 ID=Msa0459680-mRNA-1:exon:11257;Parent=Msa0459680-mRNA-1
chr3_3 exon 56337461 56337535 56337461 ID=Msa0459680-mRNA-1:exon:11256;Parent=Msa0459680-mRNA-1
chr3_3 exon 56337623 56337712 56337623 ID=Msa0459680-mRNA-1:exon:11255;Parent=Msa0459680-mRNA-1
chr3_3 exon 56337939 56338013 56337939 ID=Msa0459680-mRNA-1:exon:11254;Parent=Msa0459680-mRNA-1
chr3_3 exon 56339810 56339941 56339810 ID=Msa0459680-mRNA-1:exon:11253;Parent=Msa0459680-mRNA-1
chr3_3 exon 56340665 56340760 56340665 ID=Msa0459680-mRNA-1:exon:11252;Parent=Msa0459680-mRNA-1
chr3_3 exon 56341227 56341325 56341227 ID=Msa0459680-mRNA-1:exon:11251;Parent=Msa0459680-mRNA-1
chr3_3 exon 56341696 56341776 56341696 ID=Msa0459680-mRNA-1:exon:11250;Parent=Msa0459680-mRNA-1
chr3_3 exon 56342998 56343159 56342998 ID=Msa0459680-mRNA-1:exon:11249;Parent=Msa0459680-mRNA-1
chr3_3 exon 56343556 56343630 56343556 ID=Msa0459680-mRNA-1:exon:11248;Parent=Msa0459680-mRNA-1
chr3_3 exon 56344213 56344308 56344213 ID=Msa0459680-mRNA-1:exon:11247;Parent=Msa0459680-mRNA-1
chr3_3 exon 56344434 56344598 56344434 ID=Msa0459680-mRNA-1:exon:11246;Parent=Msa0459680-mRNA-1
chr3_3 exon 56344742 56344834 56344742 ID=Msa0459680-mRNA-1:exon:11245;Parent=Msa0459680-mRNA-1
chr3_3 exon 56346144 56346525 56346144 ID=Msa0459680-mRNA-1:exon:11244;Parent=Msa0459680-mRNA-1
chr3_3 five_prime_UTR 56346417 56346525 56346417 ID=Msa0459680-mRNA-1:five_prime_utr;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56346144 56346416 56346144 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56344742 56344834 56344742 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56344434 56344598 56344434 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56344213 56344308 56344213 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56343556 56343630 56343556 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56342998 56343159 56342998 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56341696 56341776 56341696 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56341227 56341325 56341227 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56340665 56340760 56340665 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56339810 56339941 56339810 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56337939 56338013 56337939 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56337623 56337712 56337623 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56337461 56337535 56337461 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 CDS 56336947 56337123 56336947 ID=Msa0459680-mRNA-1:cds;Parent=Msa0459680-mRNA-1
chr3_3 three_prime_UTR 56336540 56336946 56336540 ID=Msa0459680-mRNA-1:three_prime_utr;Parent=Msa0459680-mRNA-1
Gene Sequence

>Msa0459680

ATGTCGTATGTTCCTCCACACTTGAGAAACGCGGCGAGTTCAACCACCGTGTCCACCACCACCGGAACCCTAGACAACCACCACCACCACCACCACCATCACAACAACAACCTCGCATTCTCAAACTCACATTCCAACACTCCTTCTCTCTTCAATGCCTCTCGCCGTACCTCCGCCGCTCCTCCGTCGTCGAGGACTATCGCCGCCGTTCCTGATACTGTCTTCCCTAAATGGCAACCTTCTGAACGCGTTTCTCGCATGAACCCTGACCAGATTGAAGAGGTCCGCCATCGGCTAAATCTTGATGTTACTGTTTCGTCTGACTCTCCTGCTGCACCCGCACCTATAGAATCATTTAATGATATGTGTTTGCATCCAAGTATCATGAAGGACATTGCTTATCATGATTACACCAGGCCAACTTCTATCCAGGCACAGGCCATGCCTATTGCTCTCAGTGGAAGGGATCTTTTGGGTTGTGCTGAAACTGGTAGCGGGAAGACTGCAGCTTTCACAATTCCTATGATACAGCATTGCTTGGCCCAACCTCCAATTCGGCGTGGAGATGGTCCCTTGGCATTAGTTTTGGCTCCTACTAGAGAACTCGCTCAACAAATAGAAAAAGAGGTCCAAGCTTTTAGCAGATCTCTCGAGTCATTTAAAACTGCCATAGTTGTCGGTGGAACTAACATCGAAAAACAGAGGTCTGAACTAAGAGCCGGAGTTGAAATAGCAGTTGCCACCCCTGGAAGGTTCATTGACCACTTACAACAAGGCAACACTTCCCTCTCTAGAATTTCTTATGTTGTTCTAGATGAGGCCGATAGAATGCTTGATATGGGTTTTGAACCGCAGATAAGGGAGATAATGAGAAGTCTTCCCGAGAAGCATCAAACACTACTGTTCAGTGCAACTATGCCTGTGGAGATCGAAGCATTGTCCAAGGAGTACTTAGCTAGCCCCGTGCAAGTTAAGGTGGGAAAAGTGAGCAGCCCAACAACTAATGTTTCACAAACTCTTGTGAAGGTTTCTGAAAATGAGAAGATTGACCGACTTCTAGATTTGCTTGTAGAGGAGGCATCACAGGCTGAAAAGTGTAGTCATCCATTTCCGTTGACAATTGTGTTTGTTGAGAGAAAGACAAGGTGTGATGAAGTTGCTGAAGCATTAATTGCTCAAGGATTATCTGCAGTTTCTCTGCATGGCGGCCGCAGTCAGAGTGAAAGAGAGGCTGCCTTGCATGATTTTCGGAGTAGCTCAACAAGCATTTTGGTTGCCACCGATGTTGCATCTCGGGGCTTGGATGTCACAGGAGTGTCACACGTCATCAATCTTGATCTTCCAAAGACCACAGAAGATTATATACACCGAATTGGAAGGACAGGGCGTGCAGGATCAACTGGCATAGCCACCTCCTTTTACACTGATCGTGATATGTTCCTTGTGTCAAATATAAGGAAAGCCATAGCTGATGCTGAATCTGGGAACGCTGTGGCATTTGCTACTGGGAAGGTTGCCAGAAGGAAGGAGAAAGAAGCAGCAGCTGCACACAAAGAGGCAAACATTGCTTTATCGAAACACCTTGGACCGGGAGCTGCTTCAATTAACATAGAAGATAAGTATAGATTCATGATTGCTGCCTCAAACAGTAAAGGAGAGGGCACAGCTGATAGTGCATGGGATGATTGA
Protein sequence

>Msa0459680

MSYVPPHLRNAASSTTVSTTTGTLDNHHHHHHHHNNNLAFSNSHSNTPSLFNASRRTSAAPPSSRTIAAVPDTVFPKWQPSERVSRMNPDQIEEVRHRLNLDVTVSSDSPAAPAPIESFNDMCLHPSIMKDIAYHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSPTTNVSQTLVKVSENEKIDRLLDLLVEEASQAEKCSHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTDRDMFLVSNIRKAIADAESGNAVAFATGKVARRKEKEAAAAHKEANIALSKHLGPGAASINIEDKYRFMIAASNSKGEGTADSAWDD*