Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463870 | XP_003601014.1 | 98.962 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463870 | sp|P93798|SNAA_VITVI | 75.433 | 289 | 71 | 0 | 1 | 289 | 1 | 289 | 8.09e-155 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463870 | B7FHQ2 | 98.962 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 0.0 | 588 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0091730 | Msa0463870 | 0.801876 | 7.320942e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463870 | MtrunA17_Chr3g0114331 | 98.962 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 0.0 | 588 |
| Msa0463870 | MtrunA17_Chr5g0437941 | 87.594 | 266 | 33 | 0 | 24 | 289 | 1 | 266 | 1.07e-178 | 493 |
| Msa0463870 | MtrunA17_Chr7g0244271 | 60.000 | 290 | 107 | 2 | 1 | 289 | 1 | 282 | 2.62e-119 | 343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463870 | AT3G56190.1 | 74.740 | 289 | 73 | 0 | 1 | 289 | 1 | 289 | 2.64e-152 | 427 |
| Msa0463870 | AT3G56190.2 | 69.919 | 246 | 67 | 2 | 45 | 289 | 1 | 240 | 1.93e-121 | 347 |
| Msa0463870 | AT3G56450.1 | 53.360 | 253 | 81 | 4 | 11 | 263 | 99 | 314 | 1.46e-81 | 251 |
Find 70 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGGCGGCGTCATCGTATT+TGG | 0.210406 | 3_3:+63439815 | None:intergenic |
| GTTCCAGCTGAGCAGAAAAT+TGG | 0.238693 | 3_3:+63437422 | None:intergenic |
| CTGCTGAAGTACGGAGTTAA+AGG | 0.281493 | 3_3:-63436875 | Msa0463870:CDS |
| CTCAGCGGTTGGGGCTTATT+CGG | 0.287854 | 3_3:-63439840 | Msa0463870:CDS |
| GATTGCTTGTGCAGGATTCT+TGG | 0.307639 | 3_3:-63435188 | Msa0463870:intron |
| ATCATCCTCCTCAAGCTCTT+TGG | 0.317053 | 3_3:+63435125 | None:intergenic |
| AATGACAATTCGCCAACTTT+AGG | 0.332179 | 3_3:+63439051 | None:intergenic |
| AGAAGAAGAATCGTAAGAAA+AGG | 0.348526 | 3_3:+63439985 | None:intergenic |
| CATAAGCTGTAATCAAATAT+TGG | 0.350026 | 3_3:-63435098 | Msa0463870:exon |
| AACACGCGAGTATAGATTAT+TGG | 0.365527 | 3_3:-63436665 | Msa0463870:CDS |
| CAATGCTTTAGAGAGATATC+AGG | 0.370913 | 3_3:-63436795 | Msa0463870:intron |
| GAAGAAGAATCGTAAGAAAA+GGG | 0.384587 | 3_3:+63439986 | None:intergenic |
| TGATCGGCCATTGCAGAGAT+TGG | 0.390900 | 3_3:+63439906 | None:intergenic |
| ACACTCTAAAATACATGTAT+AGG | 0.392537 | 3_3:+63435023 | None:intergenic |
| TCTCTCTAAAGCATTGCTTA+TGG | 0.395466 | 3_3:+63436802 | None:intergenic |
| TGATATTGGCAGACTCTCTA+TGG | 0.397839 | 3_3:-63437801 | Msa0463870:CDS |
| TGAGAAGAAGCTCAGCGGTT+GGG | 0.404670 | 3_3:-63439850 | Msa0463870:CDS |
| CAGGATCCCCTTTGCAGAGT+TGG | 0.418830 | 3_3:+63436828 | None:intergenic |
| AAAGCATTGCTTATGGCAAC+AGG | 0.430940 | 3_3:+63436809 | None:intergenic |
| TGTTATGGTTTCAATTGAAT+CGG | 0.431377 | 3_3:-63434997 | Msa0463870:three_prime_UTR |
| TTCCAGCTGAGCAGAAAATT+GGG | 0.442689 | 3_3:+63437423 | None:intergenic |
| GGGCCACTTTCTGCTTGCAC+TGG | 0.445207 | 3_3:+63437443 | None:intergenic |
| GCATTTGCCAACTCTGCAAA+GGG | 0.452090 | 3_3:-63436835 | Msa0463870:CDS |
| GAGAAGAAGCTCAGCGGTTG+GGG | 0.452702 | 3_3:-63439849 | Msa0463870:CDS |
| GCAGATTATTGTTTAGAGAC+TGG | 0.453680 | 3_3:+63436894 | None:intergenic |
| TGGATCGATTCACTGTGTTA+TGG | 0.459306 | 3_3:+63439939 | None:intergenic |
| TATGGCTGCTAGATATTTGA+AGG | 0.472081 | 3_3:-63437783 | Msa0463870:intron |
| GTTGGCGAATTGTCATTTGA+AGG | 0.474657 | 3_3:-63439045 | Msa0463870:intron |
| CATTGCAGAGATTGGGAGAA+AGG | 0.475287 | 3_3:+63439914 | None:intergenic |
| ACATGATTTAGCGAGTTTGA+AGG | 0.476913 | 3_3:+63439770 | None:intergenic |
| AACAATAATCTGCTGAAGTA+CGG | 0.480012 | 3_3:-63436884 | Msa0463870:CDS |
| AAGCAAGCATGAGGCTGCAC+AGG | 0.480216 | 3_3:-63438929 | Msa0463870:CDS |
| AAAGATTCACAGCATGGTCT+AGG | 0.487457 | 3_3:+63437828 | None:intergenic |
| AAAGGCCATCTTCTTAATGC+TGG | 0.492063 | 3_3:-63436857 | Msa0463870:CDS |
| ACACCTCGTTTATGCGAGCC+TGG | 0.492285 | 3_3:-63434881 | Msa0463870:intron |
| AGCTGTAATCAAATATTGGT+TGG | 0.502257 | 3_3:-63435094 | Msa0463870:three_prime_UTR |
| ATGGTTTCAATTGAATCGGT+TGG | 0.507998 | 3_3:-63434993 | Msa0463870:three_prime_UTR |
| AGCCTGCTCAATATTCTGTT+CGG | 0.513720 | 3_3:+63437528 | None:intergenic |
| GATCGGCCATTGCAGAGATT+GGG | 0.517368 | 3_3:+63439907 | None:intergenic |
| GGCATTTGCCAACTCTGCAA+AGG | 0.519272 | 3_3:-63436836 | Msa0463870:CDS |
| CTTCGATAGCATGACCCCTC+TGG | 0.527507 | 3_3:-63436378 | Msa0463870:intron |
| TTCTGCTCTCGCTAAGTGAT+CGG | 0.529154 | 3_3:+63439890 | None:intergenic |
| CTTTCTCCCAATCTCTGCAA+TGG | 0.534333 | 3_3:-63439913 | Msa0463870:exon |
| CTGAGAAGAAGCTCAGCGGT+TGG | 0.538239 | 3_3:-63439851 | Msa0463870:CDS |
| TCTGTTGAAGAATGAGGACC+AGG | 0.539444 | 3_3:+63440024 | None:intergenic |
| AAACCAGTGCAAGCAGAAAG+TGG | 0.546990 | 3_3:-63437446 | Msa0463870:CDS |
| AAATGCCAGCATTAAGAAGA+TGG | 0.547199 | 3_3:+63436852 | None:intergenic |
| AAAGTTTACTGATGTTGTCA+AGG | 0.548556 | 3_3:-63436402 | Msa0463870:CDS |
| GGCAGCAACCTACCTAAAGT+TGG | 0.561622 | 3_3:-63439063 | Msa0463870:CDS |
| CAGAGATTGGGAGAAAGGAA+TGG | 0.563235 | 3_3:+63439919 | None:intergenic |
| GTCCGAACAGAATATTGAGC+AGG | 0.564869 | 3_3:-63437530 | Msa0463870:CDS |
| AGAGACTCTGTTGAAGAATG+AGG | 0.566000 | 3_3:+63440018 | None:intergenic |
| ACAATTCGCCAACTTTAGGT+AGG | 0.570732 | 3_3:+63439055 | None:intergenic |
| AGCAGATTTATCGAAGAGAT+CGG | 0.577827 | 3_3:+63439797 | None:intergenic |
| GCTGAAAGCCAAAGAGCTTG+AGG | 0.578556 | 3_3:-63435133 | Msa0463870:CDS |
| TCGCGTGTTCCAGAAAATGT+TGG | 0.588869 | 3_3:+63436679 | None:intergenic |
| GCAGTTGATGAAGAAGATGT+TGG | 0.601416 | 3_3:-63436425 | Msa0463870:CDS |
| CACAGAAAAGATTCACAGCA+TGG | 0.603872 | 3_3:+63437822 | None:intergenic |
| TTAGTTGGAAAGCAAGCATG+AGG | 0.607758 | 3_3:-63438938 | Msa0463870:intron |
| AACATCTTCTTCATCAACTG+CGG | 0.618153 | 3_3:+63436427 | None:intergenic |
| TCAAGAAATGAGTTTCGATG+AGG | 0.631973 | 3_3:-63434963 | Msa0463870:three_prime_UTR |
| ACGCGAGTATAGATTATTGG+CGG | 0.645446 | 3_3:-63436662 | Msa0463870:intron |
| GAAAGCCAAAGAGCTTGAGG+AGG | 0.661189 | 3_3:-63435130 | Msa0463870:CDS |
| TGTATATTAACATTATAACC+AGG | 0.679980 | 3_3:+63434863 | None:intergenic |
| TAAATAGAAGCTTACCAGAG+GGG | 0.695345 | 3_3:+63436364 | None:intergenic |
| AGATTTATCGAAGAGATCGG+CGG | 0.696373 | 3_3:+63439800 | None:intergenic |
| AGGTGTAACTCGCATAAACG+AGG | 0.699356 | 3_3:+63434898 | None:intergenic |
| CATTTGCCAACTCTGCAAAG+GGG | 0.703180 | 3_3:-63436834 | Msa0463870:CDS |
| TGGCATTGTAGGGGACAAAG+CGG | 0.706358 | 3_3:-63439084 | Msa0463870:intron |
| AAAGCTGAGAAGAAGCTCAG+CGG | 0.714530 | 3_3:-63439855 | Msa0463870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAATACATATTACATA+TGG | + | chr3_3:63436543-63436562 | None:intergenic | 10.0% |
| !! | GTAAATAAATAATCAAAATA+CGG | + | chr3_3:63436876-63436895 | None:intergenic | 10.0% |
| !! | AACTTATTAACTTAAATTAT+TGG | + | chr3_3:63437164-63437183 | None:intergenic | 10.0% |
| !!! | AATAATTTAAGTTAATAAGT+TGG | - | chr3_3:63437163-63437182 | Msa0463870:intron | 10.0% |
| !!! | ATAATTTAAGTTAATAAGTT+GGG | - | chr3_3:63437164-63437183 | Msa0463870:intron | 10.0% |
| !! | TATAAAAAGACTAATATAAG+TGG | - | chr3_3:63436005-63436024 | Msa0463870:intron | 15.0% |
| !!! | TAATTTAAGTTAATAAGTTG+GGG | - | chr3_3:63437165-63437184 | Msa0463870:intron | 15.0% |
| !!! | ATTTCATTATCAATTTGTTT+TGG | - | chr3_3:63438266-63438285 | Msa0463870:intron | 15.0% |
| !! | ACTGATAATAAAAGAAAAAA+AGG | + | chr3_3:63439363-63439382 | None:intergenic | 15.0% |
| !!! | ACTATTGTTTTTATTACGAT+CGG | - | chr3_3:63435208-63435227 | Msa0463870:intron | 20.0% |
| !! | ATGTATGCATCAATAAATTA+GGG | + | chr3_3:63435294-63435313 | None:intergenic | 20.0% |
| !! | AATGTATGCATCAATAAATT+AGG | + | chr3_3:63435295-63435314 | None:intergenic | 20.0% |
| !! | AATCGATCAAAAGATAAATT+AGG | + | chr3_3:63435348-63435367 | None:intergenic | 20.0% |
| !! | TGTGATTAACTTTATAATCA+TGG | - | chr3_3:63435743-63435762 | Msa0463870:intron | 20.0% |
| !! | ATTAACTTTATAATCATGGA+TGG | - | chr3_3:63435747-63435766 | Msa0463870:intron | 20.0% |
| !!! | TTGTTTTGATTTGATTGATT+TGG | - | chr3_3:63435784-63435803 | Msa0463870:intron | 20.0% |
| !!! | AACATATAGGATTAGTTTTT+TGG | - | chr3_3:63435867-63435886 | Msa0463870:intron | 20.0% |
| !! | ATTTCTGTTGAATAAAAACT+TGG | - | chr3_3:63436137-63436156 | Msa0463870:intron | 20.0% |
| !!! | TTTGAATAAGTTTTAACTTG+AGG | - | chr3_3:63436587-63436606 | Msa0463870:intron | 20.0% |
| !!! | TTTGAACAAGTTTTAACTTA+AGG | - | chr3_3:63436736-63436755 | Msa0463870:intron | 20.0% |
| !!! | TGATTTTTATCAAAATGAAG+AGG | - | chr3_3:63437406-63437425 | Msa0463870:intron | 20.0% |
| !! | TCCTTTGTCAATAATTTATT+TGG | - | chr3_3:63437555-63437574 | Msa0463870:intron | 20.0% |
| !! | CCTTTGTCAATAATTTATTT+GGG | - | chr3_3:63437556-63437575 | Msa0463870:intron | 20.0% |
| !! | CTTTGTCAATAATTTATTTG+GGG | - | chr3_3:63437557-63437576 | Msa0463870:intron | 20.0% |
| !!! | AGTTTGTTTTTTAAAATGGA+AGG | - | chr3_3:63437861-63437880 | Msa0463870:intron | 20.0% |
| !!! | ATGAACTGACATTTTTTTTT+TGG | - | chr3_3:63438420-63438439 | Msa0463870:intron | 20.0% |
| !!! | TGAACTGACATTTTTTTTTT+GGG | - | chr3_3:63438421-63438440 | Msa0463870:intron | 20.0% |
| !! | TATTCTGTTACAATAAAATG+TGG | + | chr3_3:63438635-63438654 | None:intergenic | 20.0% |
| !!! | ATACAATTTGTTTCTTCTAT+TGG | - | chr3_3:63439163-63439182 | Msa0463870:intron | 20.0% |
| !! | TAAAAGAAAAAAAGGAAAAC+TGG | + | chr3_3:63439355-63439374 | None:intergenic | 20.0% |
| !!! | ATGTTTTAACAAAAGATACA+GGG | + | chr3_3:63439528-63439547 | None:intergenic | 20.0% |
| !!! | TATGTTTTAACAAAAGATAC+AGG | + | chr3_3:63439529-63439548 | None:intergenic | 20.0% |
| !! | TGTATATTAACATTATAACC+AGG | + | chr3_3:63440028-63440047 | None:intergenic | 20.0% |
| ! | AAAAACTGCATATGAAAAAG+TGG | + | chr3_3:63434830-63434849 | None:intergenic | 25.0% |
| !!! | ACTTTTTCATATGCAGTTTT+TGG | - | chr3_3:63434829-63434848 | Msa0463870:three_prime_UTR | 25.0% |
| !!! | CTTTTTCATATGCAGTTTTT+GGG | - | chr3_3:63434830-63434849 | Msa0463870:three_prime_UTR | 25.0% |
| !!! | GTTATTATCGTTTTTCACTT+TGG | - | chr3_3:63435414-63435433 | Msa0463870:intron | 25.0% |
| !! | AGATTTTCTGATGAAATAAG+TGG | - | chr3_3:63435440-63435459 | Msa0463870:intron | 25.0% |
| !! | ATTTTGTTGCATGTTTCATT+TGG | - | chr3_3:63435492-63435511 | Msa0463870:intron | 25.0% |
| ! | TTGAATGTAATTATGTGTCT+CGG | + | chr3_3:63435577-63435596 | None:intergenic | 25.0% |
| !!! | TTGTATCTTCTGTTTTTAGT+TGG | - | chr3_3:63435935-63435954 | Msa0463870:intron | 25.0% |
| !! | TGTGCACTAAAATTCTTTTA+TGG | - | chr3_3:63436052-63436071 | Msa0463870:intron | 25.0% |
| ! | GCTTTACTAAGTTAAACTAT+AGG | + | chr3_3:63436257-63436276 | None:intergenic | 25.0% |
| ! | TATCACATGATTATGCAAAA+GGG | + | chr3_3:63436484-63436503 | None:intergenic | 25.0% |
| ! | ATATCACATGATTATGCAAA+AGG | + | chr3_3:63436485-63436504 | None:intergenic | 25.0% |
| ! | TCAATCAACAATATAACAGA+AGG | + | chr3_3:63436515-63436534 | None:intergenic | 25.0% |
| ! | CCCAAATAAATTATTGACAA+AGG | + | chr3_3:63437559-63437578 | None:intergenic | 25.0% |
| ! | CATTGAAAGAATGTTAATCT+GGG | + | chr3_3:63437638-63437657 | None:intergenic | 25.0% |
| ! | TAAGATATATCATAGACCAA+AGG | + | chr3_3:63437792-63437811 | None:intergenic | 25.0% |
| ! | TTTGGTCTATGATATATCTT+AGG | - | chr3_3:63437791-63437810 | Msa0463870:CDS | 25.0% |
| ! | TTGGTCTATGATATATCTTA+GGG | - | chr3_3:63437792-63437811 | Msa0463870:CDS | 25.0% |
| !!! | GCAGAGTTTGTTTTTTAAAA+TGG | - | chr3_3:63437857-63437876 | Msa0463870:intron | 25.0% |
| ! | ACATTCGATTTAACATAAAG+TGG | + | chr3_3:63437903-63437922 | None:intergenic | 25.0% |
| ! | TGAAGAGTTGTGATAAAAAA+GGG | + | chr3_3:63437934-63437953 | None:intergenic | 25.0% |
| !!! | TTGTTTTGTATTTGTTTTGC+AGG | - | chr3_3:63438178-63438197 | Msa0463870:intron | 25.0% |
| ! | CATAATCTTGCATTTAATTC+TGG | - | chr3_3:63438342-63438361 | Msa0463870:intron | 25.0% |
| ! | CTGGTATTTATTTGAACATT+AGG | - | chr3_3:63438361-63438380 | Msa0463870:intron | 25.0% |
| ! | ATAAACTTGTCAAGAAAAAG+TGG | + | chr3_3:63438610-63438629 | None:intergenic | 25.0% |
| ! | AACATACAAATGTTTACACA+AGG | + | chr3_3:63438665-63438684 | None:intergenic | 25.0% |
| !!! | CAATTTTGGCTACTTTTTAT+TGG | + | chr3_3:63438757-63438776 | None:intergenic | 25.0% |
| ! | CAATAAAAAGTAGCCAAAAT+TGG | - | chr3_3:63438755-63438774 | Msa0463870:intron | 25.0% |
| ! | ATGAAGTTGAAAGGTTTAAT+AGG | + | chr3_3:63438838-63438857 | None:intergenic | 25.0% |
| ! | TATTAAACCTTTCAACTTCA+TGG | - | chr3_3:63438837-63438856 | Msa0463870:intron | 25.0% |
| !!! | CTGATACAAAGCTTATTTTA+TGG | - | chr3_3:63438959-63438978 | Msa0463870:intron | 25.0% |
| !! | ATTACATTGTGCTTTGAATT+TGG | - | chr3_3:63439383-63439402 | Msa0463870:intron | 25.0% |
| ! | CATAAGCTGTAATCAAATAT+TGG | - | chr3_3:63439790-63439809 | Msa0463870:CDS | 25.0% |
| !!! | ACACTCTAAAATACATGTAT+AGG | + | chr3_3:63439868-63439887 | None:intergenic | 25.0% |
| !!! | ATTTTAGAGTGTACTTGTTA+TGG | - | chr3_3:63439876-63439895 | Msa0463870:CDS | 25.0% |
| ! | TGTTATGGTTTCAATTGAAT+CGG | - | chr3_3:63439891-63439910 | Msa0463870:CDS | 25.0% |
| !!! | CTTTTTTCTTGAATTATACG+CGG | - | chr3_3:63440050-63440069 | Msa0463870:five_prime_UTR | 25.0% |
| GAAGAAGAATCGTAAGAAAA+GGG | + | chr3_3:63434905-63434924 | None:intergenic | 30.0% | |
| AGAAGAAGAATCGTAAGAAA+AGG | + | chr3_3:63434906-63434925 | None:intergenic | 30.0% | |
| ATTTGATCGATTGACGAAAA+AGG | + | chr3_3:63435173-63435192 | None:intergenic | 30.0% | |
| TCGATTCTTGATTTCAAATG+CGG | - | chr3_3:63435251-63435270 | Msa0463870:intron | 30.0% | |
| !! | TTTTGATCGATTAGTTACGA+TGG | - | chr3_3:63435356-63435375 | Msa0463870:intron | 30.0% |
| ! | TTACGATGGAATCGAATTTT+GGG | - | chr3_3:63435370-63435389 | Msa0463870:intron | 30.0% |
| TGAAAAACGATAATAACTCC+AGG | + | chr3_3:63435411-63435430 | None:intergenic | 30.0% | |
| ! | CGGATAATAAGTTGAGAAAA+CGG | + | chr3_3:63435605-63435624 | None:intergenic | 30.0% |
| ! | TCAGTCACCAAATTTAAAGT+AGG | + | chr3_3:63435699-63435718 | None:intergenic | 30.0% |
| !! | TTTGATTGATTTGGCATTGT+AGG | - | chr3_3:63435793-63435812 | Msa0463870:intron | 30.0% |
| !! | TTGATTGATTTGGCATTGTA+GGG | - | chr3_3:63435794-63435813 | Msa0463870:intron | 30.0% |
| GTCATTTGAAGGTAACATAT+AGG | - | chr3_3:63435854-63435873 | Msa0463870:intron | 30.0% | |
| GTATGTATGTAAGTTGTTAC+CGG | - | chr3_3:63436027-63436046 | Msa0463870:intron | 30.0% | |
| ! | ATGTTTCCTATTTTGCAGAA+AGG | - | chr3_3:63436224-63436243 | Msa0463870:intron | 30.0% |
| !! | TAAGTATTAGCCTTGATGAA+TGG | + | chr3_3:63436401-63436420 | None:intergenic | 30.0% |
| AATAAACCAATCAGATCAGA+TGG | + | chr3_3:63436688-63436707 | None:intergenic | 30.0% | |
| AAGAAAACAATCAGATCAGA+TGG | + | chr3_3:63436836-63436855 | None:intergenic | 30.0% | |
| CTGTAACACAAAAGAGAAAA+CGG | + | chr3_3:63437027-63437046 | None:intergenic | 30.0% | |
| ! | TTTTCTCTTTTGTGTTACAG+AGG | - | chr3_3:63437027-63437046 | Msa0463870:intron | 30.0% |
| ! | GTGAATCTTTTCTGTGATAT+TGG | - | chr3_3:63437073-63437092 | Msa0463870:intron | 30.0% |
| ! | TATTTGGGGAATTTTCCTTT+TGG | - | chr3_3:63437571-63437590 | Msa0463870:intron | 30.0% |
| GCATTGAAAGAATGTTAATC+TGG | + | chr3_3:63437639-63437658 | None:intergenic | 30.0% | |
| ! | CGATTTGCTCTATTAAGTTT+CGG | - | chr3_3:63437819-63437838 | Msa0463870:CDS | 30.0% |
| TTCGATTTAACATAAAGTGG+AGG | + | chr3_3:63437900-63437919 | None:intergenic | 30.0% | |
| CTGAAGAGTTGTGATAAAAA+AGG | + | chr3_3:63437935-63437954 | None:intergenic | 30.0% | |
| AACAATAATCTGCTGAAGTA+CGG | - | chr3_3:63438004-63438023 | Msa0463870:intron | 30.0% | |
| GAGCAACTAATAAGATGTTT+AGG | + | chr3_3:63438152-63438171 | None:intergenic | 30.0% | |
| ! | GAATTAGATCCAACATTTTC+TGG | - | chr3_3:63438200-63438219 | Msa0463870:intron | 30.0% |
| !!! | ACTGACATTTTTTTTTTGGG+TGG | - | chr3_3:63438424-63438443 | Msa0463870:intron | 30.0% |
| !!! | CATTTTTTTTTTGGGTGGAT+AGG | - | chr3_3:63438429-63438448 | Msa0463870:intron | 30.0% |
| AAAGTTTACTGATGTTGTCA+AGG | - | chr3_3:63438486-63438505 | Msa0463870:intron | 30.0% | |
| CATTTGTATGTTCTGTTACT+TGG | - | chr3_3:63438673-63438692 | Msa0463870:intron | 30.0% | |
| !! | TGATTTCAAGTAGTCTTGTT+TGG | - | chr3_3:63438715-63438734 | Msa0463870:intron | 30.0% |
| ! | TGTTTGGAGTGTTAAAATGA+TGG | - | chr3_3:63438731-63438750 | Msa0463870:intron | 30.0% |
| TAACATCAGAACTTCAAATC+TGG | + | chr3_3:63438905-63438924 | None:intergenic | 30.0% | |
| CAATAGGTGAAAGAAAATCA+AGG | - | chr3_3:63439136-63439155 | Msa0463870:intron | 30.0% | |
| TTTCTTGCAATGTAAATGCA+TGG | - | chr3_3:63439256-63439275 | Msa0463870:intron | 30.0% | |
| !!! | AAACAGTTTTGTTATCCTTC+TGG | - | chr3_3:63439411-63439430 | Msa0463870:intron | 30.0% |
| TTTGAAAAGCTAGTAGTTGT+AGG | - | chr3_3:63439587-63439606 | Msa0463870:intron | 30.0% | |
| TTTGGAAGCTTACAATATCA+CGG | + | chr3_3:63439644-63439663 | None:intergenic | 30.0% | |
| AGCTGTAATCAAATATTGGT+TGG | - | chr3_3:63439794-63439813 | Msa0463870:CDS | 30.0% | |
| !!! | TTTTGGGTTTAGATTAGACC+TGG | - | chr3_3:63434846-63434865 | Msa0463870:three_prime_UTR | 35.0% |
| AGCAGATTTATCGAAGAGAT+CGG | + | chr3_3:63435094-63435113 | None:intergenic | 35.0% | |
| ACATGATTTAGCGAGTTTGA+AGG | + | chr3_3:63435121-63435140 | None:intergenic | 35.0% | |
| ! | GTTACGATGGAATCGAATTT+TGG | - | chr3_3:63435369-63435388 | Msa0463870:intron | 35.0% |
| !!! | GGGATTTTTTTTGAGATACC+TGG | - | chr3_3:63435390-63435409 | Msa0463870:intron | 35.0% |
| TTGGCTGCCTACTTTAAATT+TGG | - | chr3_3:63435689-63435708 | Msa0463870:intron | 35.0% | |
| !! | TGATTGATTTGGCATTGTAG+GGG | - | chr3_3:63435795-63435814 | Msa0463870:intron | 35.0% |
| AATGACAATTCGCCAACTTT+AGG | + | chr3_3:63435840-63435859 | None:intergenic | 35.0% | |
| !!! | AGGATTAGTTTTTTGGCATG+TGG | - | chr3_3:63435874-63435893 | Msa0463870:intron | 35.0% |
| !! | AAGAATTTTAGTGCACACAC+CGG | + | chr3_3:63436049-63436068 | None:intergenic | 35.0% |
| TGCATTGGAATCTTACAGAA+AGG | - | chr3_3:63436110-63436129 | Msa0463870:intron | 35.0% | |
| AAAGAAAACCCAACTTTCTG+TGG | + | chr3_3:63436191-63436210 | None:intergenic | 35.0% | |
| ! | GTTTTTGAATTCGAAGTGCA+TGG | + | chr3_3:63436288-63436307 | None:intergenic | 35.0% |
| AATACCAATCTAGCAATAGG+CGG | + | chr3_3:63436898-63436917 | None:intergenic | 35.0% | |
| ACGAATACCAATCTAGCAAT+AGG | + | chr3_3:63436901-63436920 | None:intergenic | 35.0% | |
| TATGGCTGCTAGATATTTGA+AGG | - | chr3_3:63437105-63437124 | Msa0463870:intron | 35.0% | |
| ! | TTTGAAGTATACCAAGCTAC+TGG | - | chr3_3:63437270-63437289 | Msa0463870:intron | 35.0% |
| TGGATATTACTACTATACGC+AGG | - | chr3_3:63437316-63437335 | Msa0463870:intron | 35.0% | |
| !!! | CTTTTGGCTTTCTTTTGTCT+CGG | - | chr3_3:63437587-63437606 | Msa0463870:intron | 35.0% |
| GAAAGAATGTTAATCTGGGA+TGG | + | chr3_3:63437634-63437653 | None:intergenic | 35.0% | |
| !! | CATATGTTGACTTGTGTACA+TGG | - | chr3_3:63437740-63437759 | Msa0463870:intron | 35.0% |
| AAAAGTTTGTCCAATGCCTT+TGG | - | chr3_3:63437773-63437792 | Msa0463870:intron | 35.0% | |
| ! | ATATCATAGACCAAAGGCAT+TGG | + | chr3_3:63437786-63437805 | None:intergenic | 35.0% |
| GCAGATTATTGTTTAGAGAC+TGG | + | chr3_3:63437997-63438016 | None:intergenic | 35.0% | |
| AAATGCCAGCATTAAGAAGA+TGG | + | chr3_3:63438039-63438058 | None:intergenic | 35.0% | |
| !! | TCTCTCTAAAGCATTGCTTA+TGG | + | chr3_3:63438089-63438108 | None:intergenic | 35.0% |
| !! | CAATGCTTTAGAGAGATATC+AGG | - | chr3_3:63438093-63438112 | Msa0463870:intron | 35.0% |
| AACACGCGAGTATAGATTAT+TGG | - | chr3_3:63438223-63438242 | Msa0463870:intron | 35.0% | |
| !!! | TTGTTTTGGACCAAGAGAAT+TGG | - | chr3_3:63438280-63438299 | Msa0463870:intron | 35.0% |
| AACATCTTCTTCATCAACTG+CGG | + | chr3_3:63438464-63438483 | None:intergenic | 35.0% | |
| TAAATAGAAGCTTACCAGAG+GGG | + | chr3_3:63438527-63438546 | None:intergenic | 35.0% | |
| CTAAATAGAAGCTTACCAGA+GGG | + | chr3_3:63438528-63438547 | None:intergenic | 35.0% | |
| TCTAAATAGAAGCTTACCAG+AGG | + | chr3_3:63438529-63438548 | None:intergenic | 35.0% | |
| AAAAGTAGCCAAAATTGGCA+AGG | - | chr3_3:63438760-63438779 | Msa0463870:intron | 35.0% | |
| AAGCATAACTGTGCTAACAT+GGG | + | chr3_3:63438791-63438810 | None:intergenic | 35.0% | |
| TAAGCATAACTGTGCTAACA+TGG | + | chr3_3:63438792-63438811 | None:intergenic | 35.0% | |
| ! | CTTTTGACCATGAAGTTGAA+AGG | + | chr3_3:63438847-63438866 | None:intergenic | 35.0% |
| AACTTCATGGTCAAAAGAGA+AGG | - | chr3_3:63438850-63438869 | Msa0463870:intron | 35.0% | |
| AATGTGAGAGTTCACTTTAG+AGG | - | chr3_3:63438877-63438896 | Msa0463870:intron | 35.0% | |
| TGTTATTCTCATATCTCAGC+TGG | - | chr3_3:63438920-63438939 | Msa0463870:CDS | 35.0% | |
| !!! | GCTTATTTTATGGCTGTTCT+AGG | - | chr3_3:63438969-63438988 | Msa0463870:intron | 35.0% |
| !! | TTTTATGGCTGTTCTAGGTA+AGG | - | chr3_3:63438974-63438993 | Msa0463870:intron | 35.0% |
| ! | TTTATGGCTGTTCTAGGTAA+GGG | - | chr3_3:63438975-63438994 | Msa0463870:intron | 35.0% |
| ACTAGAAAGTCACAAGTTCA+TGG | + | chr3_3:63439064-63439083 | None:intergenic | 35.0% | |
| TTGTATGACTAGATAGTCCT+GGG | - | chr3_3:63439215-63439234 | Msa0463870:intron | 35.0% | |
| TGCCTACAATAAACTCACAA+TGG | - | chr3_3:63439285-63439304 | Msa0463870:intron | 35.0% | |
| GTCCATTGTGAGTTTATTGT+AGG | + | chr3_3:63439290-63439309 | None:intergenic | 35.0% | |
| ACACTCTTAAAAACACCAGA+AGG | + | chr3_3:63439429-63439448 | None:intergenic | 35.0% | |
| ! | GAAGACAACACTTCTTTTGA+GGG | - | chr3_3:63439722-63439741 | Msa0463870:intron | 35.0% |
| ATGGTTTCAATTGAATCGGT+TGG | - | chr3_3:63439895-63439914 | Msa0463870:CDS | 35.0% | |
| TCAAGAAATGAGTTTCGATG+AGG | - | chr3_3:63439925-63439944 | Msa0463870:five_prime_UTR | 35.0% | |
| AGAGACTCTGTTGAAGAATG+AGG | + | chr3_3:63434873-63434892 | None:intergenic | 40.0% | |
| ! | TGGATCGATTCACTGTGTTA+TGG | + | chr3_3:63434952-63434971 | None:intergenic | 40.0% |
| AGATTTATCGAAGAGATCGG+CGG | + | chr3_3:63435091-63435110 | None:intergenic | 40.0% | |
| !!! | GATCGGCGAGTTTTGATTTT+AGG | - | chr3_3:63435225-63435244 | Msa0463870:intron | 40.0% |
| ACACAAACAACACATCGACA+CGG | + | chr3_3:63435625-63435644 | None:intergenic | 40.0% | |
| CCAAAATACAGGGAAGAGTA+TGG | + | chr3_3:63435673-63435692 | None:intergenic | 40.0% | |
| ! | CCATACTCTTCCCTGTATTT+TGG | - | chr3_3:63435670-63435689 | Msa0463870:intron | 40.0% |
| AAGTAGGCAGCCAAAATACA+GGG | + | chr3_3:63435683-63435702 | None:intergenic | 40.0% | |
| AAAGTAGGCAGCCAAAATAC+AGG | + | chr3_3:63435684-63435703 | None:intergenic | 40.0% | |
| ACAATTCGCCAACTTTAGGT+AGG | + | chr3_3:63435836-63435855 | None:intergenic | 40.0% | |
| ! | GTTGGCGAATTGTCATTTGA+AGG | - | chr3_3:63435843-63435862 | Msa0463870:intron | 40.0% |
| TTAGTTGGAAAGCAAGCATG+AGG | - | chr3_3:63435950-63435969 | Msa0463870:intron | 40.0% | |
| TTTCGAACATGCTACTGCAT+TGG | - | chr3_3:63436095-63436114 | Msa0463870:intron | 40.0% | |
| CAACTTTCTGTGGAAACACA+GGG | + | chr3_3:63436181-63436200 | None:intergenic | 40.0% | |
| CTGTGTTTCCACAGAAAGTT+GGG | - | chr3_3:63436180-63436199 | Msa0463870:intron | 40.0% | |
| ! | TCCTATTTTGCAGAAAGGAC+TGG | - | chr3_3:63436229-63436248 | Msa0463870:intron | 40.0% |
| ACCAGTCCTTTCTGCAAAAT+AGG | + | chr3_3:63436233-63436252 | None:intergenic | 40.0% | |
| !! | GTATTAGCCTTGATGAATGG+AGG | + | chr3_3:63436398-63436417 | None:intergenic | 40.0% |
| TGAGTTCCATCTGATCTGAT+TGG | - | chr3_3:63436679-63436698 | Msa0463870:CDS | 40.0% | |
| TTTACCGCCTATTGCTAGAT+TGG | - | chr3_3:63436891-63436910 | Msa0463870:CDS | 40.0% | |
| TAAATCAGTCTAGCGTGTGT+TGG | - | chr3_3:63436949-63436968 | Msa0463870:intron | 40.0% | |
| AAAGATTCACAGCATGGTCT+AGG | + | chr3_3:63437063-63437082 | None:intergenic | 40.0% | |
| CACAGAAAAGATTCACAGCA+TGG | + | chr3_3:63437069-63437088 | None:intergenic | 40.0% | |
| TGATATTGGCAGACTCTCTA+TGG | - | chr3_3:63437087-63437106 | Msa0463870:intron | 40.0% | |
| AAAAATGACAGCCCACAAGA+GGG | + | chr3_3:63437195-63437214 | None:intergenic | 40.0% | |
| AAAAAATGACAGCCCACAAG+AGG | + | chr3_3:63437196-63437215 | None:intergenic | 40.0% | |
| ACAATCAATGACCAGAAGCT+GGG | + | chr3_3:63437238-63437257 | None:intergenic | 40.0% | |
| CCAGTTATGACATGTTCATG+AGG | + | chr3_3:63437299-63437318 | None:intergenic | 40.0% | |
| CCTCATGAACATGTCATAAC+TGG | - | chr3_3:63437296-63437315 | Msa0463870:intron | 40.0% | |
| AGCCTGCTCAATATTCTGTT+CGG | + | chr3_3:63437363-63437382 | None:intergenic | 40.0% | |
| TTCCAGCTGAGCAGAAAATT+GGG | + | chr3_3:63437468-63437487 | None:intergenic | 40.0% | |
| CGAGACAAAAGAAAGCCAAA+AGG | + | chr3_3:63437589-63437608 | None:intergenic | 40.0% | |
| !! | ATGTTGACTTGTGTACATGG+TGG | - | chr3_3:63437743-63437762 | Msa0463870:intron | 40.0% |
| AAAGGCCATCTTCTTAATGC+TGG | - | chr3_3:63438031-63438050 | Msa0463870:intron | 40.0% | |
| !! | AAAGCATTGCTTATGGCAAC+AGG | + | chr3_3:63438082-63438101 | None:intergenic | 40.0% |
| ACGCGAGTATAGATTATTGG+CGG | - | chr3_3:63438226-63438245 | Msa0463870:intron | 40.0% | |
| GAGTATAGATTATTGGCGGT+AGG | - | chr3_3:63438230-63438249 | Msa0463870:intron | 40.0% | |
| !! | GCAGTTGATGAAGAAGATGT+TGG | - | chr3_3:63438463-63438482 | Msa0463870:intron | 40.0% |
| !!! | TCTCAGCTGGTGTTTTTAGT+TGG | - | chr3_3:63438933-63438952 | Msa0463870:CDS | 40.0% |
| ! | GTTCTAGGTAAGGGTTGAAT+TGG | - | chr3_3:63438984-63439003 | Msa0463870:intron | 40.0% |
| AGGGTTGAATTGGTTGTTGT+AGG | - | chr3_3:63438994-63439013 | Msa0463870:intron | 40.0% | |
| GGTTGTTGTAGGTCTATTGT+AGG | - | chr3_3:63439005-63439024 | Msa0463870:intron | 40.0% | |
| TCCTCTGTTTGCTCTTCAAT+AGG | - | chr3_3:63439120-63439139 | Msa0463870:intron | 40.0% | |
| ACCTATTGAAGAGCAAACAG+AGG | + | chr3_3:63439124-63439143 | None:intergenic | 40.0% | |
| GTTGTATGACTAGATAGTCC+TGG | - | chr3_3:63439214-63439233 | Msa0463870:intron | 40.0% | |
| CCATAGTTAAGTCCATGGAA+GGG | + | chr3_3:63439316-63439335 | None:intergenic | 40.0% | |
| TACTGCCATAGTTAAGTCCA+TGG | + | chr3_3:63439321-63439340 | None:intergenic | 40.0% | |
| AACTATGGCAGTAGCTTCAA+TGG | - | chr3_3:63439328-63439347 | Msa0463870:intron | 40.0% | |
| ACTATGGCAGTAGCTTCAAT+GGG | - | chr3_3:63439329-63439348 | Msa0463870:intron | 40.0% | |
| ! | AGAGTGTTCTTGAGCACTTA+TGG | - | chr3_3:63439442-63439461 | Msa0463870:intron | 40.0% |
| AGATACAGGGCTATCATTAC+AGG | + | chr3_3:63439515-63439534 | None:intergenic | 40.0% | |
| ACTGACACTAAGCATGTGTT+TGG | + | chr3_3:63439662-63439681 | None:intergenic | 40.0% | |
| ! | GGAAGACAACACTTCTTTTG+AGG | - | chr3_3:63439721-63439740 | Msa0463870:intron | 40.0% |
| !! | AACACTTCTTTTGAGGGTGA+AGG | - | chr3_3:63439728-63439747 | Msa0463870:intron | 40.0% |
| TCTGTTGAAGAATGAGGACC+AGG | + | chr3_3:63434867-63434886 | None:intergenic | 45.0% | |
| CAGAGATTGGGAGAAAGGAA+TGG | + | chr3_3:63434972-63434991 | None:intergenic | 45.0% | |
| CATTGCAGAGATTGGGAGAA+AGG | + | chr3_3:63434977-63434996 | None:intergenic | 45.0% | |
| CTTTCTCCCAATCTCTGCAA+TGG | - | chr3_3:63434975-63434994 | Msa0463870:three_prime_UTR | 45.0% | |
| TTCTGCTCTCGCTAAGTGAT+CGG | + | chr3_3:63435001-63435020 | None:intergenic | 45.0% | |
| AAAGCTGAGAAGAAGCTCAG+CGG | - | chr3_3:63435033-63435052 | Msa0463870:three_prime_UTR | 45.0% | |
| CCAACTTTCTGTGGAAACAC+AGG | + | chr3_3:63436182-63436201 | None:intergenic | 45.0% | |
| CCTGTGTTTCCACAGAAAGT+TGG | - | chr3_3:63436179-63436198 | Msa0463870:intron | 45.0% | |
| ATGGAGGCAAGAGCAACATT+TGG | + | chr3_3:63436382-63436401 | None:intergenic | 45.0% | |
| CACAATCAATGACCAGAAGC+TGG | + | chr3_3:63437239-63437258 | None:intergenic | 45.0% | |
| TCATGAGGATTCCAGTAGCT+TGG | + | chr3_3:63437284-63437303 | None:intergenic | 45.0% | |
| GTCCGAACAGAATATTGAGC+AGG | - | chr3_3:63437358-63437377 | Msa0463870:intron | 45.0% | |
| AAACCAGTGCAAGCAGAAAG+TGG | - | chr3_3:63437442-63437461 | Msa0463870:CDS | 45.0% | |
| GTTCCAGCTGAGCAGAAAAT+TGG | + | chr3_3:63437469-63437488 | None:intergenic | 45.0% | |
| ! | TTAATCTGGGATGGAGAGTG+GGG | + | chr3_3:63437625-63437644 | None:intergenic | 45.0% |
| ! | GTTAATCTGGGATGGAGAGT+GGG | + | chr3_3:63437626-63437645 | None:intergenic | 45.0% |
| ! | TGTTAATCTGGGATGGAGAG+TGG | + | chr3_3:63437627-63437646 | None:intergenic | 45.0% |
| CTGCTGAAGTACGGAGTTAA+AGG | - | chr3_3:63438013-63438032 | Msa0463870:intron | 45.0% | |
| GCATTTGCCAACTCTGCAAA+GGG | - | chr3_3:63438053-63438072 | Msa0463870:intron | 45.0% | |
| CATTTGCCAACTCTGCAAAG+GGG | - | chr3_3:63438054-63438073 | Msa0463870:intron | 45.0% | |
| TCGCGTGTTCCAGAAAATGT+TGG | + | chr3_3:63438212-63438231 | None:intergenic | 45.0% | |
| ! | GGGTCAAACCTTGCCAATTT+TGG | + | chr3_3:63438771-63438790 | None:intergenic | 45.0% |
| ACTACAGCAACCCCAACTAT+TGG | - | chr3_3:63439087-63439106 | Msa0463870:intron | 45.0% | |
| AACCCCAACTATTGGACCAT+GGG | - | chr3_3:63439095-63439114 | Msa0463870:intron | 45.0% | |
| AGTTAAGTCCATGGAAGGGT+TGG | + | chr3_3:63439312-63439331 | None:intergenic | 45.0% | |
| CCCTTCCATGGACTTAACTA+TGG | - | chr3_3:63439313-63439332 | Msa0463870:intron | 45.0% | |
| GCCATAGTTAAGTCCATGGA+AGG | + | chr3_3:63439317-63439336 | None:intergenic | 45.0% | |
| TCTTGAGCACTTATGGTCCA+TGG | - | chr3_3:63439449-63439468 | Msa0463870:intron | 45.0% | |
| GTGTGCTCTTGACTTTGCAT+TGG | - | chr3_3:63439482-63439501 | Msa0463870:intron | 45.0% | |
| TCACGGTGAACAGTCACATT+TGG | + | chr3_3:63439627-63439646 | None:intergenic | 45.0% | |
| CATTACCTGATTGCTTGTGC+AGG | - | chr3_3:63439692-63439711 | Msa0463870:intron | 45.0% | |
| AGAATCCTGCACAAGCAATC+AGG | + | chr3_3:63439700-63439719 | None:intergenic | 45.0% | |
| GATTGCTTGTGCAGGATTCT+TGG | - | chr3_3:63439700-63439719 | Msa0463870:intron | 45.0% | |
| ATCATCCTCCTCAAGCTCTT+TGG | + | chr3_3:63439766-63439785 | None:intergenic | 45.0% | |
| AGGTGTAACTCGCATAAACG+AGG | + | chr3_3:63439993-63440012 | None:intergenic | 45.0% | |
| !!! | TTTTCTTTTTTTTTTTTTTT+TGG | - | chr3_3:63436321-63436340 | Msa0463870:intron | 5.0% |
| GATCGGCCATTGCAGAGATT+GGG | + | chr3_3:63434984-63435003 | None:intergenic | 50.0% | |
| TGATCGGCCATTGCAGAGAT+TGG | + | chr3_3:63434985-63435004 | None:intergenic | 50.0% | |
| TGAGAAGAAGCTCAGCGGTT+GGG | - | chr3_3:63435038-63435057 | Msa0463870:three_prime_UTR | 50.0% | |
| TGGCATTGTAGGGGACAAAG+CGG | - | chr3_3:63435804-63435823 | Msa0463870:intron | 50.0% | |
| GGCAGCAACCTACCTAAAGT+TGG | - | chr3_3:63435825-63435844 | Msa0463870:intron | 50.0% | |
| GCTCTTGCCTCCATTCATCA+AGG | - | chr3_3:63436388-63436407 | Msa0463870:CDS | 50.0% | |
| TCGTGATTGCGTAGCTTAGC+TGG | - | chr3_3:63436917-63436936 | Msa0463870:CDS | 50.0% | |
| AAGCTGGGATACGCGTTAGA+AGG | + | chr3_3:63437223-63437242 | None:intergenic | 50.0% | |
| GGCATTTGCCAACTCTGCAA+AGG | - | chr3_3:63438052-63438071 | Msa0463870:intron | 50.0% | |
| CAACCCCAACTATTGGACCA+TGG | - | chr3_3:63439094-63439113 | Msa0463870:intron | 50.0% | |
| ACCCCAACTATTGGACCATG+GGG | - | chr3_3:63439096-63439115 | Msa0463870:intron | 50.0% | |
| AGCCCCATGGTCCAATAGTT+GGG | + | chr3_3:63439101-63439120 | None:intergenic | 50.0% | |
| TGATTCGACTGCTTGAACCC+AGG | + | chr3_3:63439235-63439254 | None:intergenic | 50.0% | |
| ACAATGGACCAACCCTTCCA+TGG | - | chr3_3:63439301-63439320 | Msa0463870:intron | 50.0% | |
| AGCACTTATGGTCCATGGAC+AGG | - | chr3_3:63439454-63439473 | Msa0463870:intron | 50.0% | |
| GCTGAAAGCCAAAGAGCTTG+AGG | - | chr3_3:63439755-63439774 | Msa0463870:intron | 50.0% | |
| GAAAGCCAAAGAGCTTGAGG+AGG | - | chr3_3:63439758-63439777 | Msa0463870:intron | 50.0% | |
| TAACCAGGCTCGCATAAACG+AGG | + | chr3_3:63440013-63440032 | None:intergenic | 50.0% | |
| CTGAGAAGAAGCTCAGCGGT+TGG | - | chr3_3:63435037-63435056 | Msa0463870:three_prime_UTR | 55.0% | |
| GAGAAGAAGCTCAGCGGTTG+GGG | - | chr3_3:63435039-63435058 | Msa0463870:three_prime_UTR | 55.0% | |
| CTCAGCGGTTGGGGCTTATT+CGG | - | chr3_3:63435048-63435067 | Msa0463870:three_prime_UTR | 55.0% | |
| ATCGGCGGCGTCATCGTATT+TGG | + | chr3_3:63435076-63435095 | None:intergenic | 55.0% | |
| AAGCAAGCATGAGGCTGCAC+AGG | - | chr3_3:63435959-63435978 | Msa0463870:intron | 55.0% | |
| CTAACGCGTATCCCAGCTTC+TGG | - | chr3_3:63437224-63437243 | Msa0463870:intron | 55.0% | |
| ! | GGCCCAATTTTCTGCTCAGC+TGG | - | chr3_3:63437463-63437482 | Msa0463870:CDS | 55.0% |
| CAGGATCCCCTTTGCAGAGT+TGG | + | chr3_3:63438063-63438082 | None:intergenic | 55.0% | |
| CTTCGATAGCATGACCCCTC+TGG | - | chr3_3:63438510-63438529 | Msa0463870:intron | 55.0% | |
| GCCCCATGGTCCAATAGTTG+GGG | + | chr3_3:63439100-63439119 | None:intergenic | 55.0% | |
| GAGCCCCATGGTCCAATAGT+TGG | + | chr3_3:63439102-63439121 | None:intergenic | 55.0% | |
| AGCACACGACATCCTGTCCA+TGG | + | chr3_3:63439469-63439488 | None:intergenic | 55.0% | |
| ACACCTCGTTTATGCGAGCC+TGG | - | chr3_3:63440007-63440026 | Msa0463870:five_prime_UTR | 55.0% | |
| ! | AGTTGGGGCACTCCCTCTTG+TGG | - | chr3_3:63437180-63437199 | Msa0463870:intron | 60.0% |
| ! | GTTGGGGCACTCCCTCTTGT+GGG | - | chr3_3:63437181-63437200 | Msa0463870:intron | 60.0% |
| ! | GGGCCACTTTCTGCTTGCAC+TGG | + | chr3_3:63437448-63437467 | None:intergenic | 60.0% |
| ! | ATCTGGGATGGAGAGTGGGG+TGG | + | chr3_3:63437622-63437641 | None:intergenic | 60.0% |
| GAGCAAACAGAGGAGCCCCA+TGG | + | chr3_3:63439114-63439133 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 63434805 | 63440105 | 63434805 | ID=Msa0463870;Name=Msa0463870 |
| chr3_3 | mRNA | 63434805 | 63440105 | 63434805 | ID=Msa0463870-mRNA-1;Parent=Msa0463870;Name=Msa0463870-mRNA-1;_AED=0.07;_eAED=0.07;_QI=189|1|1|1|0.88|0.8|10|291|289 |
| chr3_3 | exon | 63434805 | 63434890 | 63434805 | ID=Msa0463870-mRNA-1:exon:13818;Parent=Msa0463870-mRNA-1 |
| chr3_3 | exon | 63434911 | 63435196 | 63434911 | ID=Msa0463870-mRNA-1:exon:13817;Parent=Msa0463870-mRNA-1 |
| chr3_3 | exon | 63436379 | 63436459 | 63436379 | ID=Msa0463870-mRNA-1:exon:13816;Parent=Msa0463870-mRNA-1 |
| chr3_3 | exon | 63436663 | 63436710 | 63436663 | ID=Msa0463870-mRNA-1:exon:13815;Parent=Msa0463870-mRNA-1 |
| chr3_3 | exon | 63436796 | 63436955 | 63436796 | ID=Msa0463870-mRNA-1:exon:13814;Parent=Msa0463870-mRNA-1 |
| chr3_3 | exon | 63437421 | 63437572 | 63437421 | ID=Msa0463870-mRNA-1:exon:13813;Parent=Msa0463870-mRNA-1 |
| chr3_3 | exon | 63437784 | 63437863 | 63437784 | ID=Msa0463870-mRNA-1:exon:13812;Parent=Msa0463870-mRNA-1 |
| chr3_3 | exon | 63438884 | 63438956 | 63438884 | ID=Msa0463870-mRNA-1:exon:13811;Parent=Msa0463870-mRNA-1 |
| chr3_3 | exon | 63439046 | 63439095 | 63439046 | ID=Msa0463870-mRNA-1:exon:13810;Parent=Msa0463870-mRNA-1 |
| chr3_3 | exon | 63439772 | 63440105 | 63439772 | ID=Msa0463870-mRNA-1:exon:13809;Parent=Msa0463870-mRNA-1 |
| chr3_3 | five_prime_UTR | 63439917 | 63440105 | 63439917 | ID=Msa0463870-mRNA-1:five_prime_utr;Parent=Msa0463870-mRNA-1 |
| chr3_3 | CDS | 63439772 | 63439916 | 63439772 | ID=Msa0463870-mRNA-1:cds;Parent=Msa0463870-mRNA-1 |
| chr3_3 | CDS | 63439046 | 63439095 | 63439046 | ID=Msa0463870-mRNA-1:cds;Parent=Msa0463870-mRNA-1 |
| chr3_3 | CDS | 63438884 | 63438956 | 63438884 | ID=Msa0463870-mRNA-1:cds;Parent=Msa0463870-mRNA-1 |
| chr3_3 | CDS | 63437784 | 63437863 | 63437784 | ID=Msa0463870-mRNA-1:cds;Parent=Msa0463870-mRNA-1 |
| chr3_3 | CDS | 63437421 | 63437572 | 63437421 | ID=Msa0463870-mRNA-1:cds;Parent=Msa0463870-mRNA-1 |
| chr3_3 | CDS | 63436796 | 63436955 | 63436796 | ID=Msa0463870-mRNA-1:cds;Parent=Msa0463870-mRNA-1 |
| chr3_3 | CDS | 63436663 | 63436710 | 63436663 | ID=Msa0463870-mRNA-1:cds;Parent=Msa0463870-mRNA-1 |
| chr3_3 | CDS | 63436379 | 63436459 | 63436379 | ID=Msa0463870-mRNA-1:cds;Parent=Msa0463870-mRNA-1 |
| chr3_3 | CDS | 63435116 | 63435196 | 63435116 | ID=Msa0463870-mRNA-1:cds;Parent=Msa0463870-mRNA-1 |
| chr3_3 | three_prime_UTR | 63434911 | 63435115 | 63434911 | ID=Msa0463870-mRNA-1:three_prime_utr;Parent=Msa0463870-mRNA-1 |
| chr3_3 | three_prime_UTR | 63434805 | 63434890 | 63434805 | ID=Msa0463870-mRNA-1:three_prime_utr;Parent=Msa0463870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
