Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0466720 | XP_003601481.2 | 87.887 | 355 | 30 | 4 | 1 | 346 | 1 | 351 | 0.0 | 563 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0466720 | G7J835 | 87.887 | 355 | 30 | 4 | 1 | 346 | 1 | 351 | 0.0 | 563 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0466720 | Msa0512470 | 0.914829 | 1.210025e-84 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0466720 | MtrunA17_Chr3g0120481 | 87.887 | 355 | 30 | 4 | 1 | 346 | 1 | 351 | 0.0 | 563 |
| Msa0466720 | MtrunA17_Chr2g0277261 | 38.356 | 73 | 42 | 2 | 70 | 142 | 400 | 469 | 1.07e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0466720 | AT5G03780.1 | 30.769 | 338 | 168 | 12 | 67 | 341 | 68 | 402 | 5.64e-29 | 116 |
| Msa0466720 | AT4G12670.2 | 42.029 | 69 | 40 | 0 | 70 | 138 | 48 | 116 | 1.28e-14 | 75.5 |
| Msa0466720 | AT4G12670.2 | 56.897 | 58 | 24 | 1 | 284 | 341 | 524 | 580 | 1.70e-12 | 68.9 |
| Msa0466720 | AT1G01150.3 | 55.172 | 58 | 25 | 1 | 286 | 342 | 233 | 290 | 7.96e-13 | 68.6 |
| Msa0466720 | AT4G12670.1 | 56.897 | 58 | 24 | 1 | 284 | 341 | 414 | 470 | 1.13e-12 | 69.3 |
| Msa0466720 | AT1G01150.1 | 56.140 | 57 | 24 | 1 | 286 | 341 | 233 | 289 | 1.19e-12 | 68.6 |
Find 96 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATCAACGGGTACGGTTTC+GGG | 0.166113 | 3_3:-67674116 | None:intergenic |
| GTGGATGAACCGAAAGTTTC+TGG | 0.188540 | 3_3:+67674467 | Msa0466720:CDS |
| TTTCCAGAATCATCGAATTT+AGG | 0.217603 | 3_3:-67674248 | None:intergenic |
| GAACCTAAATTCGATGATTC+TGG | 0.228693 | 3_3:+67674245 | Msa0466720:CDS |
| GGAATCAACGGGTACGGTTT+CGG | 0.249956 | 3_3:-67674117 | None:intergenic |
| CTTTCGTACTCTTGAAGTTC+TGG | 0.273691 | 3_3:-67674738 | None:intergenic |
| CTGTTGATCTCAAGGATAAA+TGG | 0.309546 | 3_3:+67676200 | Msa0466720:CDS |
| GTGGTGGAGAGGAGAGGAAT+TGG | 0.313590 | 3_3:-67674005 | None:intergenic |
| CCGTATCCTTATGCACTGTT+TGG | 0.329444 | 3_3:-67674379 | None:intergenic |
| AATGCAAATGTTATCCTCTA+AGG | 0.332745 | 3_3:-67674138 | None:intergenic |
| CATCCACTTCCGGTTCATTC+CGG | 0.337953 | 3_3:-67674451 | None:intergenic |
| TCCTGAACCAGTTCCGGTTC+AGG | 0.339236 | 3_3:-67674419 | None:intergenic |
| TACGGTTTCGGGAACGGAAT+CGG | 0.347727 | 3_3:-67674105 | None:intergenic |
| GGAGGAAAGGTTTCTGTATC+AGG | 0.350343 | 3_3:+67674539 | Msa0466720:CDS |
| TTCACCTCCGAGTTTGTTGC+AGG | 0.360798 | 3_3:-67674162 | None:intergenic |
| CGTACCCGTTGATTCCTTAG+AGG | 0.363404 | 3_3:+67674124 | Msa0466720:CDS |
| ACCTGAACCGGAACTGGTTC+AGG | 0.363541 | 3_3:+67674418 | Msa0466720:CDS |
| ACATGATCCTGAACCAGTTC+CGG | 0.376766 | 3_3:-67674425 | None:intergenic |
| GCGCGTTTGTAAGCACAATA+AGG | 0.381410 | 3_3:-67674281 | None:intergenic |
| ACGGTTTCGGGAACGGAATC+GGG | 0.382635 | 3_3:-67674104 | None:intergenic |
| ACTGGTGGTGGTAGTGGTGG+TGG | 0.389224 | 3_3:+67674683 | Msa0466720:CDS |
| CATTTATCCTTGAGATCAAC+AGG | 0.393896 | 3_3:-67676199 | None:intergenic |
| GAGGAAAGTAGTAATGATAA+TGG | 0.397161 | 3_3:+67674497 | Msa0466720:CDS |
| TCTTCAGAACCAGAAACTTT+CGG | 0.400056 | 3_3:-67674476 | None:intergenic |
| AACTAAAGATTCTGATTTCG+AGG | 0.416086 | 3_3:+67674577 | Msa0466720:CDS |
| CGGAAAACTGGTGGTGGTAG+TGG | 0.416507 | 3_3:+67674677 | Msa0466720:CDS |
| CAGAAACGGGACAATCGGTT+TGG | 0.427621 | 3_3:-67674199 | None:intergenic |
| TTGCTCAGGGAACGGAAAAC+TGG | 0.433257 | 3_3:+67674665 | Msa0466720:CDS |
| ACTTTCGGTTCATCCACTTC+CGG | 0.435100 | 3_3:-67674461 | None:intergenic |
| GGTTGAACCTGAACCGGAAC+TGG | 0.438380 | 3_3:+67674412 | Msa0466720:CDS |
| GGTGGTGGTAGTGGTGGTGG+TGG | 0.444320 | 3_3:+67674686 | Msa0466720:CDS |
| AGAAACGGGACAATCGGTTT+GGG | 0.445530 | 3_3:-67674198 | None:intergenic |
| GTGGACAGAAACGGGACAAT+CGG | 0.451848 | 3_3:-67674204 | None:intergenic |
| TCTGTCCACGTCACTTGCAT+CGG | 0.455896 | 3_3:+67674218 | Msa0466720:CDS |
| CAAGTGACGTGGACAGAAAC+GGG | 0.461251 | 3_3:-67674212 | None:intergenic |
| GAAAACGTAAGAGATTGAAT+TGG | 0.465382 | 3_3:+67675523 | Msa0466720:CDS |
| CAAACACCAAACAGTGCATA+AGG | 0.465899 | 3_3:+67674373 | Msa0466720:CDS |
| AACGGGTACGGTTTCGGGAA+CGG | 0.467703 | 3_3:-67674111 | None:intergenic |
| AGAATCATCGAATTTAGGTT+CGG | 0.471132 | 3_3:-67674243 | None:intergenic |
| GCAAGTGACGTGGACAGAAA+CGG | 0.480126 | 3_3:-67674213 | None:intergenic |
| TCATGTAAACCGGAATGAAC+CGG | 0.485033 | 3_3:+67674442 | Msa0466720:CDS |
| AGAATAAAATCCGTCGTCAC+CGG | 0.489382 | 3_3:+67673945 | Msa0466720:CDS |
| TTATCCTCTAAGGAATCAAC+GGG | 0.490208 | 3_3:-67674128 | None:intergenic |
| GCAACCGGTTGAACCTGAAC+CGG | 0.491105 | 3_3:+67674406 | Msa0466720:CDS |
| AGTTCCGGTTCAGGTTCAAC+CGG | 0.493660 | 3_3:-67674410 | None:intergenic |
| AAACCGGAATGAACCGGAAG+TGG | 0.502517 | 3_3:+67674448 | Msa0466720:CDS |
| TAAGGATACGGAAAAGCAAC+CGG | 0.502623 | 3_3:+67674391 | Msa0466720:CDS |
| GGCTGCATTGTGGTCGTCGT+TGG | 0.520462 | 3_3:-67674027 | None:intergenic |
| TGGTTCAGGATCATGTAAAC+CGG | 0.529209 | 3_3:+67674432 | Msa0466720:CDS |
| GTTTCTGTGGCGGAGAAGAA+AGG | 0.529575 | 3_3:+67674599 | Msa0466720:CDS |
| TGCATTACCTGCAACAAACT+CGG | 0.529643 | 3_3:+67674155 | Msa0466720:CDS |
| TCGGGAACGGAATCGGGAAG+TGG | 0.533711 | 3_3:-67674098 | None:intergenic |
| GTTATCCTCTAAGGAATCAA+CGG | 0.537345 | 3_3:-67674129 | None:intergenic |
| GAGAGGAATTGGAGAGGCGG+CGG | 0.541460 | 3_3:-67673994 | None:intergenic |
| TATAAATATCGATTATAGCT+CGG | 0.543464 | 3_3:-67676254 | None:intergenic |
| TGCATTGTGGTCGTCGTTGG+TGG | 0.547328 | 3_3:-67674024 | None:intergenic |
| TTCTGATTTCGAGGTTTCTG+TGG | 0.547418 | 3_3:+67674586 | Msa0466720:CDS |
| CTCTAAGGAATCAACGGGTA+CGG | 0.549071 | 3_3:-67674123 | None:intergenic |
| GGAAATGATGAAGATGAAGA+TGG | 0.556012 | 3_3:+67674518 | Msa0466720:CDS |
| AGCAGCCTTACGTTTAACAT+TGG | 0.557451 | 3_3:-67674627 | None:intergenic |
| TCGTGCCAATGTTAAACGTA+AGG | 0.561986 | 3_3:+67674622 | Msa0466720:CDS |
| CAGAAGATCAGAATATCCCT+TGG | 0.568204 | 3_3:+67676128 | Msa0466720:CDS |
| ATTGTGGTCGTCGTTGGTGG+TGG | 0.568451 | 3_3:-67674021 | None:intergenic |
| CGGGAAGTGGAGTGTGAGTG+TGG | 0.569480 | 3_3:-67674085 | None:intergenic |
| CCAAACAGTGCATAAGGATA+CGG | 0.569966 | 3_3:+67674379 | Msa0466720:CDS |
| TCGCACTCCTGTTGATCTCA+AGG | 0.571882 | 3_3:+67676192 | Msa0466720:CDS |
| TGAAGATGAAGATGGAGGAA+AGG | 0.572241 | 3_3:+67674526 | Msa0466720:CDS |
| GGAATTGGAGAGGCGGCGGA+AGG | 0.573812 | 3_3:-67673990 | None:intergenic |
| AAGATCAGAATATCCCTTGG+AGG | 0.574002 | 3_3:+67676131 | Msa0466720:CDS |
| GAAAGTTTCTGGTTCTGAAG+AGG | 0.574074 | 3_3:+67674478 | Msa0466720:CDS |
| GTCGCTGTTGCTGTTGTAGA+CGG | 0.577461 | 3_3:-67674048 | None:intergenic |
| AATGGAGGAGCATTACCTCC+AGG | 0.577985 | 3_3:+67676218 | Msa0466720:CDS |
| AAAACTGGTGGTGGTAGTGG+TGG | 0.580026 | 3_3:+67674680 | Msa0466720:CDS |
| TATACTACGGCGGCGAACAC+CGG | 0.582649 | 3_3:-67673964 | None:intergenic |
| GGAGAGGAGAGGAATTGGAG+AGG | 0.584895 | 3_3:-67674000 | None:intergenic |
| TGATTTCGAGGTTTCTGTGG+CGG | 0.600498 | 3_3:+67674589 | Msa0466720:CDS |
| AGGGAACGGAAAACTGGTGG+TGG | 0.612464 | 3_3:+67674671 | Msa0466720:CDS |
| CGGCGGAAGGTGTTATACTA+CGG | 0.614400 | 3_3:-67673977 | None:intergenic |
| GCGGCGAACACCGGTGACGA+CGG | 0.614754 | 3_3:-67673955 | None:intergenic |
| GTCTACAACAGCAACAGCGA+CGG | 0.620104 | 3_3:+67674050 | Msa0466720:CDS |
| TGGTGGTGGTGACGTAGACG+AGG | 0.624663 | 3_3:+67674700 | Msa0466720:CDS |
| TGTTGTAGACGGCTGCATTG+TGG | 0.624933 | 3_3:-67674037 | None:intergenic |
| GAGGAGAGGAATTGGAGAGG+CGG | 0.626329 | 3_3:-67673997 | None:intergenic |
| ACGAAGCAGAATATGCTGAC+TGG | 0.626474 | 3_3:+67675501 | Msa0466720:CDS |
| TACAACAGCAACAGCGACGG+CGG | 0.627964 | 3_3:+67674053 | Msa0466720:CDS |
| CTCAGGGAACGGAAAACTGG+TGG | 0.642678 | 3_3:+67674668 | Msa0466720:CDS |
| AGGAGCATTACCTCCAGGCA+AGG | 0.648306 | 3_3:+67676223 | Msa0466720:CDS |
| TCGTTGGTGGTGGAGAGGAG+AGG | 0.652897 | 3_3:-67674011 | None:intergenic |
| CGGAACCGATGCAAGTGACG+TGG | 0.655615 | 3_3:-67674223 | None:intergenic |
| GGTCGTCGTTGGTGGTGGAG+AGG | 0.664183 | 3_3:-67674016 | None:intergenic |
| GAAGTGGAGTGTGAGTGTGG+TGG | 0.671974 | 3_3:-67674082 | None:intergenic |
| AATGATGAAGATGAAGATGG+AGG | 0.676726 | 3_3:+67674521 | Msa0466720:CDS |
| TTGATCTCAAGGATAAATGG+AGG | 0.683743 | 3_3:+67676203 | Msa0466720:CDS |
| TGGTGGTGACGTAGACGAGG+AGG | 0.689122 | 3_3:+67674703 | Msa0466720:CDS |
| CGGAAGGTGTTATACTACGG+CGG | 0.713230 | 3_3:-67673974 | None:intergenic |
| ATTACCTGCAACAAACTCGG+AGG | 0.764721 | 3_3:+67674158 | Msa0466720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTAATTATTTTTCAATTA+AGG | + | chr3_3:67675085-67675104 | Msa0466720:intron | 10.0% |
| !!! | GTTTAATTATTTTTCAATTA+AGG | + | chr3_3:67675085-67675104 | Msa0466720:intron | 10.0% |
| !! | AAAACAGATATAATCAATTA+TGG | + | chr3_3:67675831-67675850 | Msa0466720:intron | 15.0% |
| !! | AAACAGATATAATCAATTAT+GGG | + | chr3_3:67675832-67675851 | Msa0466720:intron | 15.0% |
| !! | AAAACAGATATAATCAATTA+TGG | + | chr3_3:67675831-67675850 | Msa0466720:intron | 15.0% |
| !! | AAACAGATATAATCAATTAT+GGG | + | chr3_3:67675832-67675851 | Msa0466720:intron | 15.0% |
| !!! | TCTTTTATGATAGAACATTA+TGG | + | chr3_3:67675686-67675705 | Msa0466720:intron | 20.0% |
| !!! | TCTTTTATGATAGAACATTA+TGG | + | chr3_3:67675686-67675705 | Msa0466720:intron | 20.0% |
| ! | TACTACTACTACTACTTAAT+TGG | - | chr3_3:67674862-67674881 | None:intergenic | 25.0% |
| !!! | ATTTTTCAATTAAGGCTACA+AGG | + | chr3_3:67675093-67675112 | Msa0466720:intron | 25.0% |
| !!! | TTTTTCAATTAAGGCTACAA+GGG | + | chr3_3:67675094-67675113 | Msa0466720:intron | 25.0% |
| ! | TTGATTAAAAAAGACACGTT+TGG | - | chr3_3:67675231-67675250 | None:intergenic | 25.0% |
| ! | ATGTTCTATCATAAAAGAGA+TGG | - | chr3_3:67675684-67675703 | None:intergenic | 25.0% |
| ! | AGAAACTTAAAATGTTTACC+AGG | - | chr3_3:67675783-67675802 | None:intergenic | 25.0% |
| !!! | GTCTTAGCTTTATTTTCTAT+AGG | + | chr3_3:67675887-67675906 | Msa0466720:intron | 25.0% |
| !! | ATTTTCTATAGGCAAATTCT+TGG | + | chr3_3:67675898-67675917 | Msa0466720:intron | 25.0% |
| ! | TTAGTTATTATTACTGCTCA+AGG | + | chr3_3:67676036-67676055 | Msa0466720:intron | 25.0% |
| !!! | ATTCTAAAATTTTCCTCCAA+GGG | - | chr3_3:67676147-67676166 | None:intergenic | 25.0% |
| !!! | AATTCTAAAATTTTCCTCCA+AGG | - | chr3_3:67676148-67676167 | None:intergenic | 25.0% |
| !!! | TGGAGGAAAATTTTAGAATT+CGG | + | chr3_3:67676148-67676167 | Msa0466720:CDS | 25.0% |
| ! | TACTACTACTACTACTTAAT+TGG | - | chr3_3:67674862-67674881 | None:intergenic | 25.0% |
| !!! | ATTTTTCAATTAAGGCTACA+AGG | + | chr3_3:67675093-67675112 | Msa0466720:intron | 25.0% |
| !!! | TTTTTCAATTAAGGCTACAA+GGG | + | chr3_3:67675094-67675113 | Msa0466720:intron | 25.0% |
| ! | TTGATTAAAAAAGACACGTT+TGG | - | chr3_3:67675231-67675250 | None:intergenic | 25.0% |
| ! | ATGTTCTATCATAAAAGAGA+TGG | - | chr3_3:67675684-67675703 | None:intergenic | 25.0% |
| ! | AGAAACTTAAAATGTTTACC+AGG | - | chr3_3:67675783-67675802 | None:intergenic | 25.0% |
| !!! | GTCTTAGCTTTATTTTCTAT+AGG | + | chr3_3:67675887-67675906 | Msa0466720:intron | 25.0% |
| !! | ATTTTCTATAGGCAAATTCT+TGG | + | chr3_3:67675898-67675917 | Msa0466720:intron | 25.0% |
| ! | TTAGTTATTATTACTGCTCA+AGG | + | chr3_3:67676036-67676055 | Msa0466720:intron | 25.0% |
| !!! | ATTCTAAAATTTTCCTCCAA+GGG | - | chr3_3:67676147-67676166 | None:intergenic | 25.0% |
| !!! | AATTCTAAAATTTTCCTCCA+AGG | - | chr3_3:67676148-67676167 | None:intergenic | 25.0% |
| !!! | TGGAGGAAAATTTTAGAATT+CGG | + | chr3_3:67676148-67676167 | Msa0466720:CDS | 25.0% |
| ! | GATTTTATTCTCATCGATCA+CGG | - | chr3_3:67673936-67673955 | None:intergenic | 30.0% |
| AATGCAAATGTTATCCTCTA+AGG | - | chr3_3:67674141-67674160 | None:intergenic | 30.0% | |
| ! | AGAATCATCGAATTTAGGTT+CGG | - | chr3_3:67674246-67674265 | None:intergenic | 30.0% |
| TTTCCAGAATCATCGAATTT+AGG | - | chr3_3:67674251-67674270 | None:intergenic | 30.0% | |
| ATTAAGAGAAAAAGCGATTC+TGG | + | chr3_3:67674322-67674341 | Msa0466720:CDS | 30.0% | |
| GAGGAAAGTAGTAATGATAA+TGG | + | chr3_3:67674497-67674516 | Msa0466720:CDS | 30.0% | |
| AACTAAAGATTCTGATTTCG+AGG | + | chr3_3:67674577-67674596 | Msa0466720:CDS | 30.0% | |
| TTTCACATTCATTGAACTTC+AGG | - | chr3_3:67674785-67674804 | None:intergenic | 30.0% | |
| ! | TTTGATAAGCTAGCTTATAG+TGG | + | chr3_3:67674960-67674979 | Msa0466720:intron | 30.0% |
| ! | TTAGTGTTTGATAGCATTAG+TGG | + | chr3_3:67675010-67675029 | Msa0466720:intron | 30.0% |
| AAGCTATAAGCTCATATATG+TGG | + | chr3_3:67675275-67675294 | Msa0466720:intron | 30.0% | |
| ATCGAATATAACCACATTTG+GGG | - | chr3_3:67675314-67675333 | None:intergenic | 30.0% | |
| GATCGAATATAACCACATTT+GGG | - | chr3_3:67675315-67675334 | None:intergenic | 30.0% | |
| TGATCGAATATAACCACATT+TGG | - | chr3_3:67675316-67675335 | None:intergenic | 30.0% | |
| CAAAACACTGACAGAAAAAA+CGG | - | chr3_3:67675394-67675413 | None:intergenic | 30.0% | |
| !! | GAATAGAGCTGATATTTTGA+TGG | + | chr3_3:67675416-67675435 | Msa0466720:intron | 30.0% |
| ! | GATTTGTCTTTAGGTATTGT+TGG | + | chr3_3:67675445-67675464 | Msa0466720:intron | 30.0% |
| GAAAACGTAAGAGATTGAAT+TGG | + | chr3_3:67675523-67675542 | Msa0466720:CDS | 30.0% | |
| TGAAGAAGAAAAAGTTCTCA+AGG | + | chr3_3:67675551-67675570 | Msa0466720:CDS | 30.0% | |
| ATTAGAGCGTGATATCAATA+AGG | - | chr3_3:67675591-67675610 | None:intergenic | 30.0% | |
| CAAAATCAAGTCAGAAGTAA+AGG | - | chr3_3:67675620-67675639 | None:intergenic | 30.0% | |
| !! | CTTTACTTCTGACTTGATTT+TGG | + | chr3_3:67675618-67675637 | Msa0466720:intron | 30.0% |
| TAGAACATTATGGCGTAATT+TGG | + | chr3_3:67675696-67675715 | Msa0466720:intron | 30.0% | |
| !!! | ACTTTTGTTTTTTGCATTGC+AGG | + | chr3_3:67676084-67676103 | Msa0466720:intron | 30.0% |
| ! | GATTTTATTCTCATCGATCA+CGG | - | chr3_3:67673936-67673955 | None:intergenic | 30.0% |
| AATGCAAATGTTATCCTCTA+AGG | - | chr3_3:67674141-67674160 | None:intergenic | 30.0% | |
| ! | AGAATCATCGAATTTAGGTT+CGG | - | chr3_3:67674246-67674265 | None:intergenic | 30.0% |
| TTTCCAGAATCATCGAATTT+AGG | - | chr3_3:67674251-67674270 | None:intergenic | 30.0% | |
| ATTAAGAGAAAAAGCGATTC+TGG | + | chr3_3:67674322-67674341 | Msa0466720:CDS | 30.0% | |
| GAGGAAAGTAGTAATGATAA+TGG | + | chr3_3:67674497-67674516 | Msa0466720:CDS | 30.0% | |
| AACTAAAGATTCTGATTTCG+AGG | + | chr3_3:67674577-67674596 | Msa0466720:CDS | 30.0% | |
| TTTCACATTCATTGAACTTC+AGG | - | chr3_3:67674785-67674804 | None:intergenic | 30.0% | |
| ! | TTTGATAAGCTAGCTTATAG+TGG | + | chr3_3:67674960-67674979 | Msa0466720:intron | 30.0% |
| ! | TTAGTGTTTGATAGCATTAG+TGG | + | chr3_3:67675010-67675029 | Msa0466720:intron | 30.0% |
| AAGCTATAAGCTCATATATG+TGG | + | chr3_3:67675275-67675294 | Msa0466720:intron | 30.0% | |
| ATCGAATATAACCACATTTG+GGG | - | chr3_3:67675314-67675333 | None:intergenic | 30.0% | |
| GATCGAATATAACCACATTT+GGG | - | chr3_3:67675315-67675334 | None:intergenic | 30.0% | |
| TGATCGAATATAACCACATT+TGG | - | chr3_3:67675316-67675335 | None:intergenic | 30.0% | |
| CAAAACACTGACAGAAAAAA+CGG | - | chr3_3:67675394-67675413 | None:intergenic | 30.0% | |
| !! | GAATAGAGCTGATATTTTGA+TGG | + | chr3_3:67675416-67675435 | Msa0466720:intron | 30.0% |
| ! | GATTTGTCTTTAGGTATTGT+TGG | + | chr3_3:67675445-67675464 | Msa0466720:intron | 30.0% |
| GAAAACGTAAGAGATTGAAT+TGG | + | chr3_3:67675523-67675542 | Msa0466720:CDS | 30.0% | |
| TGAAGAAGAAAAAGTTCTCA+AGG | + | chr3_3:67675551-67675570 | Msa0466720:CDS | 30.0% | |
| ATTAGAGCGTGATATCAATA+AGG | - | chr3_3:67675591-67675610 | None:intergenic | 30.0% | |
| CAAAATCAAGTCAGAAGTAA+AGG | - | chr3_3:67675620-67675639 | None:intergenic | 30.0% | |
| !! | CTTTACTTCTGACTTGATTT+TGG | + | chr3_3:67675618-67675637 | Msa0466720:intron | 30.0% |
| TAGAACATTATGGCGTAATT+TGG | + | chr3_3:67675696-67675715 | Msa0466720:intron | 30.0% | |
| !!! | ACTTTTGTTTTTTGCATTGC+AGG | + | chr3_3:67676084-67676103 | Msa0466720:intron | 30.0% |
| ! | TTATCCTCTAAGGAATCAAC+GGG | - | chr3_3:67674131-67674150 | None:intergenic | 35.0% |
| ! | GTTATCCTCTAAGGAATCAA+CGG | - | chr3_3:67674132-67674151 | None:intergenic | 35.0% |
| GAACCTAAATTCGATGATTC+TGG | + | chr3_3:67674245-67674264 | Msa0466720:CDS | 35.0% | |
| TCTTCAGAACCAGAAACTTT+CGG | - | chr3_3:67674479-67674498 | None:intergenic | 35.0% | |
| GGAAATGATGAAGATGAAGA+TGG | + | chr3_3:67674518-67674537 | Msa0466720:CDS | 35.0% | |
| AATGATGAAGATGAAGATGG+AGG | + | chr3_3:67674521-67674540 | Msa0466720:CDS | 35.0% | |
| !! | TGTGAAAAAAGCATTGCTCA+GGG | + | chr3_3:67674652-67674671 | Msa0466720:CDS | 35.0% |
| ! | TTTAGATTGAAGGCGTGATA+AGG | + | chr3_3:67674910-67674929 | Msa0466720:intron | 35.0% |
| !! | TGGAGAGTTGATTTGTCTTT+AGG | + | chr3_3:67675436-67675455 | Msa0466720:intron | 35.0% |
| !! | ACTTCTGACTTGATTTTGGA+TGG | + | chr3_3:67675622-67675641 | Msa0466720:intron | 35.0% |
| !! | ATGGCTTACTGGTTTAATCA+CGG | + | chr3_3:67675641-67675660 | Msa0466720:intron | 35.0% |
| TTCTATAGGCAAATTCTTGG+CGG | + | chr3_3:67675901-67675920 | Msa0466720:intron | 35.0% | |
| !! | TTCTTGGCGGTTAATTTGTT+AGG | + | chr3_3:67675914-67675933 | Msa0466720:intron | 35.0% |
| !! | TCTTGGCGGTTAATTTGTTA+GGG | + | chr3_3:67675915-67675934 | Msa0466720:intron | 35.0% |
| !!! | TTGTTTTTTGCATTGCAGGA+AGG | + | chr3_3:67676088-67676107 | Msa0466720:intron | 35.0% |
| CATTTATCCTTGAGATCAAC+AGG | - | chr3_3:67676202-67676221 | None:intergenic | 35.0% | |
| CTGTTGATCTCAAGGATAAA+TGG | + | chr3_3:67676200-67676219 | Msa0466720:CDS | 35.0% | |
| TTGATCTCAAGGATAAATGG+AGG | + | chr3_3:67676203-67676222 | Msa0466720:CDS | 35.0% | |
| ! | TTATCCTCTAAGGAATCAAC+GGG | - | chr3_3:67674131-67674150 | None:intergenic | 35.0% |
| ! | GTTATCCTCTAAGGAATCAA+CGG | - | chr3_3:67674132-67674151 | None:intergenic | 35.0% |
| GAACCTAAATTCGATGATTC+TGG | + | chr3_3:67674245-67674264 | Msa0466720:CDS | 35.0% | |
| TCTTCAGAACCAGAAACTTT+CGG | - | chr3_3:67674479-67674498 | None:intergenic | 35.0% | |
| GGAAATGATGAAGATGAAGA+TGG | + | chr3_3:67674518-67674537 | Msa0466720:CDS | 35.0% | |
| AATGATGAAGATGAAGATGG+AGG | + | chr3_3:67674521-67674540 | Msa0466720:CDS | 35.0% | |
| !! | TGTGAAAAAAGCATTGCTCA+GGG | + | chr3_3:67674652-67674671 | Msa0466720:CDS | 35.0% |
| ! | TTTAGATTGAAGGCGTGATA+AGG | + | chr3_3:67674910-67674929 | Msa0466720:intron | 35.0% |
| !! | TGGAGAGTTGATTTGTCTTT+AGG | + | chr3_3:67675436-67675455 | Msa0466720:intron | 35.0% |
| !! | ACTTCTGACTTGATTTTGGA+TGG | + | chr3_3:67675622-67675641 | Msa0466720:intron | 35.0% |
| !! | ATGGCTTACTGGTTTAATCA+CGG | + | chr3_3:67675641-67675660 | Msa0466720:intron | 35.0% |
| TTCTATAGGCAAATTCTTGG+CGG | + | chr3_3:67675901-67675920 | Msa0466720:intron | 35.0% | |
| !! | TTCTTGGCGGTTAATTTGTT+AGG | + | chr3_3:67675914-67675933 | Msa0466720:intron | 35.0% |
| !! | TCTTGGCGGTTAATTTGTTA+GGG | + | chr3_3:67675915-67675934 | Msa0466720:intron | 35.0% |
| !!! | TTGTTTTTTGCATTGCAGGA+AGG | + | chr3_3:67676088-67676107 | Msa0466720:intron | 35.0% |
| CATTTATCCTTGAGATCAAC+AGG | - | chr3_3:67676202-67676221 | None:intergenic | 35.0% | |
| CTGTTGATCTCAAGGATAAA+TGG | + | chr3_3:67676200-67676219 | Msa0466720:CDS | 35.0% | |
| TTGATCTCAAGGATAAATGG+AGG | + | chr3_3:67676203-67676222 | Msa0466720:CDS | 35.0% | |
| AGAATAAAATCCGTCGTCAC+CGG | + | chr3_3:67673945-67673964 | Msa0466720:CDS | 40.0% | |
| TGCATTACCTGCAACAAACT+CGG | + | chr3_3:67674155-67674174 | Msa0466720:CDS | 40.0% | |
| CAAACACCAAACAGTGCATA+AGG | + | chr3_3:67674373-67674392 | Msa0466720:CDS | 40.0% | |
| CCAAACAGTGCATAAGGATA+CGG | + | chr3_3:67674379-67674398 | Msa0466720:CDS | 40.0% | |
| TAAGGATACGGAAAAGCAAC+CGG | + | chr3_3:67674391-67674410 | Msa0466720:CDS | 40.0% | |
| TGGTTCAGGATCATGTAAAC+CGG | + | chr3_3:67674432-67674451 | Msa0466720:CDS | 40.0% | |
| TCATGTAAACCGGAATGAAC+CGG | + | chr3_3:67674442-67674461 | Msa0466720:CDS | 40.0% | |
| !! | GAAAGTTTCTGGTTCTGAAG+AGG | + | chr3_3:67674478-67674497 | Msa0466720:CDS | 40.0% |
| TGAAGATGAAGATGGAGGAA+AGG | + | chr3_3:67674526-67674545 | Msa0466720:CDS | 40.0% | |
| TTCTGATTTCGAGGTTTCTG+TGG | + | chr3_3:67674586-67674605 | Msa0466720:CDS | 40.0% | |
| TCGTGCCAATGTTAAACGTA+AGG | + | chr3_3:67674622-67674641 | Msa0466720:CDS | 40.0% | |
| AGCAGCCTTACGTTTAACAT+TGG | - | chr3_3:67674630-67674649 | None:intergenic | 40.0% | |
| !!! | CTGAGCAATGCTTTTTTCAC+AGG | - | chr3_3:67674653-67674672 | None:intergenic | 40.0% |
| !! | CTGTGAAAAAAGCATTGCTC+AGG | + | chr3_3:67674651-67674670 | Msa0466720:CDS | 40.0% |
| !! | AAAAAGCATTGCTCAGGGAA+CGG | + | chr3_3:67674657-67674676 | Msa0466720:CDS | 40.0% |
| CTTTCGTACTCTTGAAGTTC+TGG | - | chr3_3:67674741-67674760 | None:intergenic | 40.0% | |
| ! | GCACTGACACTTTAGATTGA+AGG | + | chr3_3:67674900-67674919 | Msa0466720:intron | 40.0% |
| ! | CTTGATTTTGGATGGCTTAC+TGG | + | chr3_3:67675630-67675649 | Msa0466720:intron | 40.0% |
| GTTGTTAGTTCACAACTTCC+TGG | + | chr3_3:67675762-67675781 | Msa0466720:intron | 40.0% | |
| GGGATGCTTACATTTGATCA+AGG | + | chr3_3:67675852-67675871 | Msa0466720:intron | 40.0% | |
| !! | CTTGGCGGTTAATTTGTTAG+GGG | + | chr3_3:67675916-67675935 | Msa0466720:intron | 40.0% |
| !! | TTGGCGGTTAATTTGTTAGG+GGG | + | chr3_3:67675917-67675936 | Msa0466720:intron | 40.0% |
| ! | AGTTTGGGACACAAAAAGAG+TGG | - | chr3_3:67675987-67676006 | None:intergenic | 40.0% |
| ATGCTCAGTGGTATGAGTTT+GGG | - | chr3_3:67676002-67676021 | None:intergenic | 40.0% | |
| CAGAAGATCAGAATATCCCT+TGG | + | chr3_3:67676128-67676147 | Msa0466720:CDS | 40.0% | |
| AAGATCAGAATATCCCTTGG+AGG | + | chr3_3:67676131-67676150 | Msa0466720:CDS | 40.0% | |
| AGAATAAAATCCGTCGTCAC+CGG | + | chr3_3:67673945-67673964 | Msa0466720:CDS | 40.0% | |
| TGCATTACCTGCAACAAACT+CGG | + | chr3_3:67674155-67674174 | Msa0466720:CDS | 40.0% | |
| CAAACACCAAACAGTGCATA+AGG | + | chr3_3:67674373-67674392 | Msa0466720:CDS | 40.0% | |
| CCAAACAGTGCATAAGGATA+CGG | + | chr3_3:67674379-67674398 | Msa0466720:CDS | 40.0% | |
| TAAGGATACGGAAAAGCAAC+CGG | + | chr3_3:67674391-67674410 | Msa0466720:CDS | 40.0% | |
| TGGTTCAGGATCATGTAAAC+CGG | + | chr3_3:67674432-67674451 | Msa0466720:CDS | 40.0% | |
| TCATGTAAACCGGAATGAAC+CGG | + | chr3_3:67674442-67674461 | Msa0466720:CDS | 40.0% | |
| !! | GAAAGTTTCTGGTTCTGAAG+AGG | + | chr3_3:67674478-67674497 | Msa0466720:CDS | 40.0% |
| TGAAGATGAAGATGGAGGAA+AGG | + | chr3_3:67674526-67674545 | Msa0466720:CDS | 40.0% | |
| TTCTGATTTCGAGGTTTCTG+TGG | + | chr3_3:67674586-67674605 | Msa0466720:CDS | 40.0% | |
| TCGTGCCAATGTTAAACGTA+AGG | + | chr3_3:67674622-67674641 | Msa0466720:CDS | 40.0% | |
| AGCAGCCTTACGTTTAACAT+TGG | - | chr3_3:67674630-67674649 | None:intergenic | 40.0% | |
| !!! | CTGAGCAATGCTTTTTTCAC+AGG | - | chr3_3:67674653-67674672 | None:intergenic | 40.0% |
| !! | CTGTGAAAAAAGCATTGCTC+AGG | + | chr3_3:67674651-67674670 | Msa0466720:CDS | 40.0% |
| !! | AAAAAGCATTGCTCAGGGAA+CGG | + | chr3_3:67674657-67674676 | Msa0466720:CDS | 40.0% |
| CTTTCGTACTCTTGAAGTTC+TGG | - | chr3_3:67674741-67674760 | None:intergenic | 40.0% | |
| ! | GCACTGACACTTTAGATTGA+AGG | + | chr3_3:67674900-67674919 | Msa0466720:intron | 40.0% |
| ! | CTTGATTTTGGATGGCTTAC+TGG | + | chr3_3:67675630-67675649 | Msa0466720:intron | 40.0% |
| GTTGTTAGTTCACAACTTCC+TGG | + | chr3_3:67675762-67675781 | Msa0466720:intron | 40.0% | |
| GGGATGCTTACATTTGATCA+AGG | + | chr3_3:67675852-67675871 | Msa0466720:intron | 40.0% | |
| !! | CTTGGCGGTTAATTTGTTAG+GGG | + | chr3_3:67675916-67675935 | Msa0466720:intron | 40.0% |
| !! | TTGGCGGTTAATTTGTTAGG+GGG | + | chr3_3:67675917-67675936 | Msa0466720:intron | 40.0% |
| ! | AGTTTGGGACACAAAAAGAG+TGG | - | chr3_3:67675987-67676006 | None:intergenic | 40.0% |
| ATGCTCAGTGGTATGAGTTT+GGG | - | chr3_3:67676002-67676021 | None:intergenic | 40.0% | |
| CAGAAGATCAGAATATCCCT+TGG | + | chr3_3:67676128-67676147 | Msa0466720:CDS | 40.0% | |
| AAGATCAGAATATCCCTTGG+AGG | + | chr3_3:67676131-67676150 | Msa0466720:CDS | 40.0% | |
| ! | CTCTAAGGAATCAACGGGTA+CGG | - | chr3_3:67674126-67674145 | None:intergenic | 45.0% |
| ATTACCTGCAACAAACTCGG+AGG | + | chr3_3:67674158-67674177 | Msa0466720:CDS | 45.0% | |
| ! | AGAAACGGGACAATCGGTTT+GGG | - | chr3_3:67674201-67674220 | None:intergenic | 45.0% |
| GCGCGTTTGTAAGCACAATA+AGG | - | chr3_3:67674284-67674303 | None:intergenic | 45.0% | |
| CCGTATCCTTATGCACTGTT+TGG | - | chr3_3:67674382-67674401 | None:intergenic | 45.0% | |
| ACATGATCCTGAACCAGTTC+CGG | - | chr3_3:67674428-67674447 | None:intergenic | 45.0% | |
| ACTTTCGGTTCATCCACTTC+CGG | - | chr3_3:67674464-67674483 | None:intergenic | 45.0% | |
| GTGGATGAACCGAAAGTTTC+TGG | + | chr3_3:67674467-67674486 | Msa0466720:CDS | 45.0% | |
| GGAGGAAAGGTTTCTGTATC+AGG | + | chr3_3:67674539-67674558 | Msa0466720:CDS | 45.0% | |
| TGATTTCGAGGTTTCTGTGG+CGG | + | chr3_3:67674589-67674608 | Msa0466720:CDS | 45.0% | |
| TACCAAACAGACCCCAAATG+TGG | + | chr3_3:67675300-67675319 | Msa0466720:intron | 45.0% | |
| ! | AACCACATTTGGGGTCTGTT+TGG | - | chr3_3:67675305-67675324 | None:intergenic | 45.0% |
| ACGAAGCAGAATATGCTGAC+TGG | + | chr3_3:67675501-67675520 | Msa0466720:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr3_3:67675735-67675754 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr3_3:67675736-67675755 | None:intergenic | 45.0% |
| !! | CGGTTAATTTGTTAGGGGGA+GGG | + | chr3_3:67675921-67675940 | Msa0466720:intron | 45.0% |
| !! | GGTTAATTTGTTAGGGGGAG+GGG | + | chr3_3:67675922-67675941 | Msa0466720:intron | 45.0% |
| !! | GTTAATTTGTTAGGGGGAGG+GGG | + | chr3_3:67675923-67675942 | Msa0466720:intron | 45.0% |
| AGGGGGATTTGTAAGTAGCA+TGG | + | chr3_3:67675940-67675959 | Msa0466720:intron | 45.0% | |
| GGGACACAAAAAGAGTGGTA+TGG | - | chr3_3:67675982-67676001 | None:intergenic | 45.0% | |
| CATGCTCAGTGGTATGAGTT+TGG | - | chr3_3:67676003-67676022 | None:intergenic | 45.0% | |
| TGAGTGTAGATCATGCTCAG+TGG | - | chr3_3:67676014-67676033 | None:intergenic | 45.0% | |
| ! | GGTAATTTTACCTTGCCTGG+AGG | - | chr3_3:67676236-67676255 | None:intergenic | 45.0% |
| ! | CTCGGTAATTTTACCTTGCC+TGG | - | chr3_3:67676239-67676258 | None:intergenic | 45.0% |
| ! | CTCTAAGGAATCAACGGGTA+CGG | - | chr3_3:67674126-67674145 | None:intergenic | 45.0% |
| ATTACCTGCAACAAACTCGG+AGG | + | chr3_3:67674158-67674177 | Msa0466720:CDS | 45.0% | |
| ! | AGAAACGGGACAATCGGTTT+GGG | - | chr3_3:67674201-67674220 | None:intergenic | 45.0% |
| GCGCGTTTGTAAGCACAATA+AGG | - | chr3_3:67674284-67674303 | None:intergenic | 45.0% | |
| CCGTATCCTTATGCACTGTT+TGG | - | chr3_3:67674382-67674401 | None:intergenic | 45.0% | |
| ACATGATCCTGAACCAGTTC+CGG | - | chr3_3:67674428-67674447 | None:intergenic | 45.0% | |
| ACTTTCGGTTCATCCACTTC+CGG | - | chr3_3:67674464-67674483 | None:intergenic | 45.0% | |
| GTGGATGAACCGAAAGTTTC+TGG | + | chr3_3:67674467-67674486 | Msa0466720:CDS | 45.0% | |
| GGAGGAAAGGTTTCTGTATC+AGG | + | chr3_3:67674539-67674558 | Msa0466720:CDS | 45.0% | |
| TGATTTCGAGGTTTCTGTGG+CGG | + | chr3_3:67674589-67674608 | Msa0466720:CDS | 45.0% | |
| TACCAAACAGACCCCAAATG+TGG | + | chr3_3:67675300-67675319 | Msa0466720:intron | 45.0% | |
| ! | AACCACATTTGGGGTCTGTT+TGG | - | chr3_3:67675305-67675324 | None:intergenic | 45.0% |
| ACGAAGCAGAATATGCTGAC+TGG | + | chr3_3:67675501-67675520 | Msa0466720:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr3_3:67675735-67675754 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr3_3:67675736-67675755 | None:intergenic | 45.0% |
| !! | CGGTTAATTTGTTAGGGGGA+GGG | + | chr3_3:67675921-67675940 | Msa0466720:intron | 45.0% |
| !! | GGTTAATTTGTTAGGGGGAG+GGG | + | chr3_3:67675922-67675941 | Msa0466720:intron | 45.0% |
| !! | GTTAATTTGTTAGGGGGAGG+GGG | + | chr3_3:67675923-67675942 | Msa0466720:intron | 45.0% |
| AGGGGGATTTGTAAGTAGCA+TGG | + | chr3_3:67675940-67675959 | Msa0466720:intron | 45.0% | |
| GGGACACAAAAAGAGTGGTA+TGG | - | chr3_3:67675982-67676001 | None:intergenic | 45.0% | |
| CATGCTCAGTGGTATGAGTT+TGG | - | chr3_3:67676003-67676022 | None:intergenic | 45.0% | |
| TGAGTGTAGATCATGCTCAG+TGG | - | chr3_3:67676014-67676033 | None:intergenic | 45.0% | |
| ! | GGTAATTTTACCTTGCCTGG+AGG | - | chr3_3:67676236-67676255 | None:intergenic | 45.0% |
| ! | CTCGGTAATTTTACCTTGCC+TGG | - | chr3_3:67676239-67676258 | None:intergenic | 45.0% |
| ! | CGGTTCAGTGCCTTTTCAGA+GGG | - | chr3_3:67673916-67673935 | None:intergenic | 50.0% |
| ! | ACGGTTCAGTGCCTTTTCAG+AGG | - | chr3_3:67673917-67673936 | None:intergenic | 50.0% |
| !! | CGGAAGGTGTTATACTACGG+CGG | - | chr3_3:67673977-67673996 | None:intergenic | 50.0% |
| !! | CGGCGGAAGGTGTTATACTA+CGG | - | chr3_3:67673980-67673999 | None:intergenic | 50.0% |
| TGTTGTAGACGGCTGCATTG+TGG | - | chr3_3:67674040-67674059 | None:intergenic | 50.0% | |
| ! | GTCGCTGTTGCTGTTGTAGA+CGG | - | chr3_3:67674051-67674070 | None:intergenic | 50.0% |
| GTCTACAACAGCAACAGCGA+CGG | + | chr3_3:67674050-67674069 | Msa0466720:CDS | 50.0% | |
| TACGGTTTCGGGAACGGAAT+CGG | - | chr3_3:67674108-67674127 | None:intergenic | 50.0% | |
| GAATCAACGGGTACGGTTTC+GGG | - | chr3_3:67674119-67674138 | None:intergenic | 50.0% | |
| GGAATCAACGGGTACGGTTT+CGG | - | chr3_3:67674120-67674139 | None:intergenic | 50.0% | |
| !! | CGTACCCGTTGATTCCTTAG+AGG | + | chr3_3:67674124-67674143 | Msa0466720:CDS | 50.0% |
| !! | TTCACCTCCGAGTTTGTTGC+AGG | - | chr3_3:67674165-67674184 | None:intergenic | 50.0% |
| CAGAAACGGGACAATCGGTT+TGG | - | chr3_3:67674202-67674221 | None:intergenic | 50.0% | |
| GTGGACAGAAACGGGACAAT+CGG | - | chr3_3:67674207-67674226 | None:intergenic | 50.0% | |
| CAAGTGACGTGGACAGAAAC+GGG | - | chr3_3:67674215-67674234 | None:intergenic | 50.0% | |
| GCAAGTGACGTGGACAGAAA+CGG | - | chr3_3:67674216-67674235 | None:intergenic | 50.0% | |
| TCTGTCCACGTCACTTGCAT+CGG | + | chr3_3:67674218-67674237 | Msa0466720:CDS | 50.0% | |
| ! | AGTTCCGGTTCAGGTTCAAC+CGG | - | chr3_3:67674413-67674432 | None:intergenic | 50.0% |
| AAACCGGAATGAACCGGAAG+TGG | + | chr3_3:67674448-67674467 | Msa0466720:CDS | 50.0% | |
| CATCCACTTCCGGTTCATTC+CGG | - | chr3_3:67674454-67674473 | None:intergenic | 50.0% | |
| ! | GTTTCTGTGGCGGAGAAGAA+AGG | + | chr3_3:67674599-67674618 | Msa0466720:CDS | 50.0% |
| TTGCTCAGGGAACGGAAAAC+TGG | + | chr3_3:67674665-67674684 | Msa0466720:CDS | 50.0% | |
| !! | AAAACTGGTGGTGGTAGTGG+TGG | + | chr3_3:67674680-67674699 | Msa0466720:CDS | 50.0% |
| ! | AGGCGTGATAAGGCTCTGAT+TGG | + | chr3_3:67674920-67674939 | Msa0466720:intron | 50.0% |
| ACTAAGTGGGGTCAGCTACA+TGG | - | chr3_3:67675723-67675742 | None:intergenic | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | + | chr3_3:67675722-67675741 | Msa0466720:intron | 50.0% | |
| TGTAGCTGACCCCACTTAGT+GGG | + | chr3_3:67675723-67675742 | Msa0466720:intron | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | + | chr3_3:67675729-67675748 | Msa0466720:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr3_3:67675737-67675756 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr3_3:67675734-67675753 | Msa0466720:intron | 50.0% | |
| !! | GCGGTTAATTTGTTAGGGGG+AGG | + | chr3_3:67675920-67675939 | Msa0466720:intron | 50.0% |
| TCGCACTCCTGTTGATCTCA+AGG | + | chr3_3:67676192-67676211 | Msa0466720:CDS | 50.0% | |
| !! | AATGGAGGAGCATTACCTCC+AGG | + | chr3_3:67676218-67676237 | Msa0466720:CDS | 50.0% |
| ! | CGGTTCAGTGCCTTTTCAGA+GGG | - | chr3_3:67673916-67673935 | None:intergenic | 50.0% |
| ! | ACGGTTCAGTGCCTTTTCAG+AGG | - | chr3_3:67673917-67673936 | None:intergenic | 50.0% |
| !! | CGGAAGGTGTTATACTACGG+CGG | - | chr3_3:67673977-67673996 | None:intergenic | 50.0% |
| !! | CGGCGGAAGGTGTTATACTA+CGG | - | chr3_3:67673980-67673999 | None:intergenic | 50.0% |
| TGTTGTAGACGGCTGCATTG+TGG | - | chr3_3:67674040-67674059 | None:intergenic | 50.0% | |
| ! | GTCGCTGTTGCTGTTGTAGA+CGG | - | chr3_3:67674051-67674070 | None:intergenic | 50.0% |
| GTCTACAACAGCAACAGCGA+CGG | + | chr3_3:67674050-67674069 | Msa0466720:CDS | 50.0% | |
| TACGGTTTCGGGAACGGAAT+CGG | - | chr3_3:67674108-67674127 | None:intergenic | 50.0% | |
| GAATCAACGGGTACGGTTTC+GGG | - | chr3_3:67674119-67674138 | None:intergenic | 50.0% | |
| GGAATCAACGGGTACGGTTT+CGG | - | chr3_3:67674120-67674139 | None:intergenic | 50.0% | |
| !! | CGTACCCGTTGATTCCTTAG+AGG | + | chr3_3:67674124-67674143 | Msa0466720:CDS | 50.0% |
| !! | TTCACCTCCGAGTTTGTTGC+AGG | - | chr3_3:67674165-67674184 | None:intergenic | 50.0% |
| CAGAAACGGGACAATCGGTT+TGG | - | chr3_3:67674202-67674221 | None:intergenic | 50.0% | |
| GTGGACAGAAACGGGACAAT+CGG | - | chr3_3:67674207-67674226 | None:intergenic | 50.0% | |
| CAAGTGACGTGGACAGAAAC+GGG | - | chr3_3:67674215-67674234 | None:intergenic | 50.0% | |
| GCAAGTGACGTGGACAGAAA+CGG | - | chr3_3:67674216-67674235 | None:intergenic | 50.0% | |
| TCTGTCCACGTCACTTGCAT+CGG | + | chr3_3:67674218-67674237 | Msa0466720:CDS | 50.0% | |
| ! | AGTTCCGGTTCAGGTTCAAC+CGG | - | chr3_3:67674413-67674432 | None:intergenic | 50.0% |
| AAACCGGAATGAACCGGAAG+TGG | + | chr3_3:67674448-67674467 | Msa0466720:CDS | 50.0% | |
| CATCCACTTCCGGTTCATTC+CGG | - | chr3_3:67674454-67674473 | None:intergenic | 50.0% | |
| ! | GTTTCTGTGGCGGAGAAGAA+AGG | + | chr3_3:67674599-67674618 | Msa0466720:CDS | 50.0% |
| TTGCTCAGGGAACGGAAAAC+TGG | + | chr3_3:67674665-67674684 | Msa0466720:CDS | 50.0% | |
| !! | AAAACTGGTGGTGGTAGTGG+TGG | + | chr3_3:67674680-67674699 | Msa0466720:CDS | 50.0% |
| ! | AGGCGTGATAAGGCTCTGAT+TGG | + | chr3_3:67674920-67674939 | Msa0466720:intron | 50.0% |
| ACTAAGTGGGGTCAGCTACA+TGG | - | chr3_3:67675723-67675742 | None:intergenic | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | + | chr3_3:67675722-67675741 | Msa0466720:intron | 50.0% | |
| TGTAGCTGACCCCACTTAGT+GGG | + | chr3_3:67675723-67675742 | Msa0466720:intron | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | + | chr3_3:67675729-67675748 | Msa0466720:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr3_3:67675737-67675756 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr3_3:67675734-67675753 | Msa0466720:intron | 50.0% | |
| !! | GCGGTTAATTTGTTAGGGGG+AGG | + | chr3_3:67675920-67675939 | Msa0466720:intron | 50.0% |
| TCGCACTCCTGTTGATCTCA+AGG | + | chr3_3:67676192-67676211 | Msa0466720:CDS | 50.0% | |
| !! | AATGGAGGAGCATTACCTCC+AGG | + | chr3_3:67676218-67676237 | Msa0466720:CDS | 50.0% |
| TATACTACGGCGGCGAACAC+CGG | - | chr3_3:67673967-67673986 | None:intergenic | 55.0% | |
| GAGGAGAGGAATTGGAGAGG+CGG | - | chr3_3:67674000-67674019 | None:intergenic | 55.0% | |
| GGAGAGGAGAGGAATTGGAG+AGG | - | chr3_3:67674003-67674022 | None:intergenic | 55.0% | |
| ! | GTGGTGGAGAGGAGAGGAAT+TGG | - | chr3_3:67674008-67674027 | None:intergenic | 55.0% |
| ! | ATTGTGGTCGTCGTTGGTGG+TGG | - | chr3_3:67674024-67674043 | None:intergenic | 55.0% |
| TGCATTGTGGTCGTCGTTGG+TGG | - | chr3_3:67674027-67674046 | None:intergenic | 55.0% | |
| TACAACAGCAACAGCGACGG+CGG | + | chr3_3:67674053-67674072 | Msa0466720:CDS | 55.0% | |
| GAAGTGGAGTGTGAGTGTGG+TGG | - | chr3_3:67674085-67674104 | None:intergenic | 55.0% | |
| ACGGTTTCGGGAACGGAATC+GGG | - | chr3_3:67674107-67674126 | None:intergenic | 55.0% | |
| AACGGGTACGGTTTCGGGAA+CGG | - | chr3_3:67674114-67674133 | None:intergenic | 55.0% | |
| GCAACCGGTTGAACCTGAAC+CGG | + | chr3_3:67674406-67674425 | Msa0466720:CDS | 55.0% | |
| GGTTGAACCTGAACCGGAAC+TGG | + | chr3_3:67674412-67674431 | Msa0466720:CDS | 55.0% | |
| ! | ACCTGAACCGGAACTGGTTC+AGG | + | chr3_3:67674418-67674437 | Msa0466720:CDS | 55.0% |
| TCCTGAACCAGTTCCGGTTC+AGG | - | chr3_3:67674422-67674441 | None:intergenic | 55.0% | |
| CTCAGGGAACGGAAAACTGG+TGG | + | chr3_3:67674668-67674687 | Msa0466720:CDS | 55.0% | |
| AGGGAACGGAAAACTGGTGG+TGG | + | chr3_3:67674671-67674690 | Msa0466720:CDS | 55.0% | |
| !! | CGGAAAACTGGTGGTGGTAG+TGG | + | chr3_3:67674677-67674696 | Msa0466720:CDS | 55.0% |
| !! | AGGAGCATTACCTCCAGGCA+AGG | + | chr3_3:67676223-67676242 | Msa0466720:CDS | 55.0% |
| TATACTACGGCGGCGAACAC+CGG | - | chr3_3:67673967-67673986 | None:intergenic | 55.0% | |
| GAGGAGAGGAATTGGAGAGG+CGG | - | chr3_3:67674000-67674019 | None:intergenic | 55.0% | |
| GGAGAGGAGAGGAATTGGAG+AGG | - | chr3_3:67674003-67674022 | None:intergenic | 55.0% | |
| ! | GTGGTGGAGAGGAGAGGAAT+TGG | - | chr3_3:67674008-67674027 | None:intergenic | 55.0% |
| ! | ATTGTGGTCGTCGTTGGTGG+TGG | - | chr3_3:67674024-67674043 | None:intergenic | 55.0% |
| TGCATTGTGGTCGTCGTTGG+TGG | - | chr3_3:67674027-67674046 | None:intergenic | 55.0% | |
| TACAACAGCAACAGCGACGG+CGG | + | chr3_3:67674053-67674072 | Msa0466720:CDS | 55.0% | |
| GAAGTGGAGTGTGAGTGTGG+TGG | - | chr3_3:67674085-67674104 | None:intergenic | 55.0% | |
| ACGGTTTCGGGAACGGAATC+GGG | - | chr3_3:67674107-67674126 | None:intergenic | 55.0% | |
| AACGGGTACGGTTTCGGGAA+CGG | - | chr3_3:67674114-67674133 | None:intergenic | 55.0% | |
| GCAACCGGTTGAACCTGAAC+CGG | + | chr3_3:67674406-67674425 | Msa0466720:CDS | 55.0% | |
| GGTTGAACCTGAACCGGAAC+TGG | + | chr3_3:67674412-67674431 | Msa0466720:CDS | 55.0% | |
| ! | ACCTGAACCGGAACTGGTTC+AGG | + | chr3_3:67674418-67674437 | Msa0466720:CDS | 55.0% |
| TCCTGAACCAGTTCCGGTTC+AGG | - | chr3_3:67674422-67674441 | None:intergenic | 55.0% | |
| CTCAGGGAACGGAAAACTGG+TGG | + | chr3_3:67674668-67674687 | Msa0466720:CDS | 55.0% | |
| AGGGAACGGAAAACTGGTGG+TGG | + | chr3_3:67674671-67674690 | Msa0466720:CDS | 55.0% | |
| !! | CGGAAAACTGGTGGTGGTAG+TGG | + | chr3_3:67674677-67674696 | Msa0466720:CDS | 55.0% |
| !! | AGGAGCATTACCTCCAGGCA+AGG | + | chr3_3:67676223-67676242 | Msa0466720:CDS | 55.0% |
| GAGAGGAATTGGAGAGGCGG+CGG | - | chr3_3:67673997-67674016 | None:intergenic | 60.0% | |
| !! | TCGTTGGTGGTGGAGAGGAG+AGG | - | chr3_3:67674014-67674033 | None:intergenic | 60.0% |
| GGCTGCATTGTGGTCGTCGT+TGG | - | chr3_3:67674030-67674049 | None:intergenic | 60.0% | |
| CGGGAAGTGGAGTGTGAGTG+TGG | - | chr3_3:67674088-67674107 | None:intergenic | 60.0% | |
| TCGGGAACGGAATCGGGAAG+TGG | - | chr3_3:67674101-67674120 | None:intergenic | 60.0% | |
| CGGAACCGATGCAAGTGACG+TGG | - | chr3_3:67674226-67674245 | None:intergenic | 60.0% | |
| !! | ACTGGTGGTGGTAGTGGTGG+TGG | + | chr3_3:67674683-67674702 | Msa0466720:CDS | 60.0% |
| !! | TGGTGGTGGTGACGTAGACG+AGG | + | chr3_3:67674700-67674719 | Msa0466720:CDS | 60.0% |
| ! | TGGTGGTGACGTAGACGAGG+AGG | + | chr3_3:67674703-67674722 | Msa0466720:CDS | 60.0% |
| GAGAGGAATTGGAGAGGCGG+CGG | - | chr3_3:67673997-67674016 | None:intergenic | 60.0% | |
| !! | TCGTTGGTGGTGGAGAGGAG+AGG | - | chr3_3:67674014-67674033 | None:intergenic | 60.0% |
| GGCTGCATTGTGGTCGTCGT+TGG | - | chr3_3:67674030-67674049 | None:intergenic | 60.0% | |
| CGGGAAGTGGAGTGTGAGTG+TGG | - | chr3_3:67674088-67674107 | None:intergenic | 60.0% | |
| TCGGGAACGGAATCGGGAAG+TGG | - | chr3_3:67674101-67674120 | None:intergenic | 60.0% | |
| CGGAACCGATGCAAGTGACG+TGG | - | chr3_3:67674226-67674245 | None:intergenic | 60.0% | |
| !! | ACTGGTGGTGGTAGTGGTGG+TGG | + | chr3_3:67674683-67674702 | Msa0466720:CDS | 60.0% |
| !! | TGGTGGTGGTGACGTAGACG+AGG | + | chr3_3:67674700-67674719 | Msa0466720:CDS | 60.0% |
| ! | TGGTGGTGACGTAGACGAGG+AGG | + | chr3_3:67674703-67674722 | Msa0466720:CDS | 60.0% |
| GGAATTGGAGAGGCGGCGGA+AGG | - | chr3_3:67673993-67674012 | None:intergenic | 65.0% | |
| !! | GGTCGTCGTTGGTGGTGGAG+AGG | - | chr3_3:67674019-67674038 | None:intergenic | 65.0% |
| !! | GGTGGTGGTAGTGGTGGTGG+TGG | + | chr3_3:67674686-67674705 | Msa0466720:CDS | 65.0% |
| GGAATTGGAGAGGCGGCGGA+AGG | - | chr3_3:67673993-67674012 | None:intergenic | 65.0% | |
| !! | GGTCGTCGTTGGTGGTGGAG+AGG | - | chr3_3:67674019-67674038 | None:intergenic | 65.0% |
| !! | GGTGGTGGTAGTGGTGGTGG+TGG | + | chr3_3:67674686-67674705 | Msa0466720:CDS | 65.0% |
| GCGGCGAACACCGGTGACGA+CGG | - | chr3_3:67673958-67673977 | None:intergenic | 70.0% | |
| GCGGCGAACACCGGTGACGA+CGG | - | chr3_3:67673958-67673977 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 67673905 | 67676264 | 67673905 | ID=Msa0466720;Name=Msa0466720 |
| chr3_3 | mRNA | 67673905 | 67676264 | 67673905 | ID=Msa0466720-mRNA-1;Parent=Msa0466720;Name=Msa0466720-mRNA-1;_AED=0.07;_eAED=0.07;_QI=37|1|0.66|1|1|1|3|0|351 |
| chr3_3 | exon | 67673905 | 67674765 | 67673905 | ID=Msa0466720-mRNA-1:exon:15557;Parent=Msa0466720-mRNA-1 |
| chr3_3 | exon | 67675500 | 67675572 | 67675500 | ID=Msa0466720-mRNA-1:exon:15558;Parent=Msa0466720-mRNA-1 |
| chr3_3 | exon | 67676106 | 67676264 | 67676106 | ID=Msa0466720-mRNA-1:exon:15559;Parent=Msa0466720-mRNA-1 |
| chr3_3 | five_prime_UTR | 67673905 | 67673941 | 67673905 | ID=Msa0466720-mRNA-1:five_prime_utr;Parent=Msa0466720-mRNA-1 |
| chr3_3 | CDS | 67673942 | 67674765 | 67673942 | ID=Msa0466720-mRNA-1:cds;Parent=Msa0466720-mRNA-1 |
| chr3_3 | CDS | 67675500 | 67675572 | 67675500 | ID=Msa0466720-mRNA-1:cds;Parent=Msa0466720-mRNA-1 |
| chr3_3 | CDS | 67676106 | 67676264 | 67676106 | ID=Msa0466720-mRNA-1:cds;Parent=Msa0466720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
