Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467400 | XP_003601651.2 | 98.069 | 466 | 9 | 0 | 1 | 466 | 1 | 466 | 0.0 | 946 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467400 | sp|Q93WX6|CNIF1_ARATH | 77.682 | 466 | 101 | 1 | 1 | 466 | 1 | 463 | 0.0 | 733 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467400 | G7JA74 | 98.069 | 466 | 9 | 0 | 1 | 466 | 1 | 466 | 0.0 | 946 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0467390 | Msa0467400 | 0.800371 | 1.487185e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467400 | MtrunA17_Chr3g0121581 | 98.069 | 466 | 9 | 0 | 1 | 466 | 1 | 466 | 0.0 | 946 |
| Msa0467400 | MtrunA17_Chr5g0400751 | 25.258 | 388 | 257 | 9 | 77 | 453 | 56 | 421 | 1.06e-24 | 106 |
| Msa0467400 | MtrunA17_Chr7g0271361 | 24.603 | 252 | 161 | 9 | 74 | 307 | 48 | 288 | 1.97e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467400 | AT1G08490.1 | 77.682 | 466 | 101 | 1 | 1 | 466 | 1 | 463 | 0.0 | 733 |
| Msa0467400 | AT5G65720.3 | 24.444 | 450 | 283 | 11 | 20 | 453 | 12 | 420 | 1.01e-21 | 97.8 |
| Msa0467400 | AT5G65720.1 | 24.444 | 450 | 283 | 11 | 20 | 453 | 12 | 420 | 1.01e-21 | 97.8 |
| Msa0467400 | AT5G65720.2 | 23.920 | 301 | 188 | 8 | 169 | 453 | 17 | 292 | 3.97e-13 | 70.9 |
Find 152 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGGTATAACTGAGATTT+TGG | 0.126853 | 3_3:-68684182 | Msa0467400:five_prime_UTR |
| TACTGATCTTGCAACATTTC+TGG | 0.138943 | 3_3:-68679824 | Msa0467400:CDS |
| GGCCCATAGATGCGAATATT+TGG | 0.178379 | 3_3:+68679910 | None:intergenic |
| CAACCCCTCCATCGGTATTT+AGG | 0.187810 | 3_3:-68679345 | Msa0467400:CDS |
| AACTCTTAGTTCTCCCTCTT+TGG | 0.194746 | 3_3:-68683989 | Msa0467400:CDS |
| TCCTTCAATTTGTCTATATC+TGG | 0.214976 | 3_3:+68683005 | None:intergenic |
| AATGATTTCAGATGTATATT+TGG | 0.234059 | 3_3:-68681909 | Msa0467400:CDS |
| TGGATTCTTATATGGTAAAA+TGG | 0.237622 | 3_3:-68682142 | Msa0467400:CDS |
| GTCCCAAATATTCGCATCTA+TGG | 0.258743 | 3_3:-68679913 | Msa0467400:CDS |
| ACAGGCATTGGATTCTTATA+TGG | 0.290323 | 3_3:-68682150 | Msa0467400:CDS |
| ATGAGATCAGCAAGCGAAAT+TGG | 0.294456 | 3_3:+68679129 | None:intergenic |
| TCAATCTAGTAGCTTATTCT+TGG | 0.296895 | 3_3:-68683521 | Msa0467400:CDS |
| AATTTATACTCGCAATAGTA+TGG | 0.307512 | 3_3:-68678973 | Msa0467400:three_prime_UTR |
| TAACTGGGGCTTGGAAGTTT+TGG | 0.316314 | 3_3:+68684120 | None:intergenic |
| ACTCTTAGTTCTCCCTCTTT+GGG | 0.324312 | 3_3:-68683988 | Msa0467400:CDS |
| TTACTTCCTGGTGAAGTATA+GGG | 0.324627 | 3_3:+68683944 | None:intergenic |
| AACCCCTCCATCGGTATTTA+GGG | 0.335796 | 3_3:-68679344 | Msa0467400:CDS |
| AGTGATTGAACAGCAATAAC+TGG | 0.340667 | 3_3:+68684104 | None:intergenic |
| TTAGGATTGGTTCAATTGAT+AGG | 0.340879 | 3_3:-68679166 | Msa0467400:three_prime_UTR |
| GCAGCAATTGATTACTTGTC+TGG | 0.346961 | 3_3:-68681323 | Msa0467400:CDS |
| ATACTTCACCAGGAAGTAAA+TGG | 0.354665 | 3_3:-68683940 | Msa0467400:CDS |
| TCGCTTGCTGATCTCATGAT+AGG | 0.365755 | 3_3:-68679123 | Msa0467400:three_prime_UTR |
| TCCATCGCCATTGGTTGGGT+TGG | 0.374008 | 3_3:-68684657 | Msa0467400:five_prime_UTR |
| TTTACTTCCTGGTGAAGTAT+AGG | 0.375419 | 3_3:+68683943 | None:intergenic |
| ATTGGTGAAGCAATTGGATT+AGG | 0.377119 | 3_3:-68681347 | Msa0467400:CDS |
| ATTGATTACTTGTCTGGGAT+TGG | 0.379311 | 3_3:-68681317 | Msa0467400:CDS |
| CCATCGCCATTGGTTGGGTT+GGG | 0.379491 | 3_3:-68684656 | Msa0467400:five_prime_UTR |
| TCTGACACGTGATGTGGTTC+TGG | 0.380589 | 3_3:+68684080 | None:intergenic |
| CCAGCTATTGGTGAAGCAAT+TGG | 0.385593 | 3_3:-68681353 | Msa0467400:CDS |
| CCTGGTGAAGTATAGGGAAA+TGG | 0.386768 | 3_3:+68683950 | None:intergenic |
| CAGTGTGCAATATCTCTAAT+AGG | 0.390967 | 3_3:+68682378 | None:intergenic |
| GCCCATAGATGCGAATATTT+GGG | 0.403525 | 3_3:+68679911 | None:intergenic |
| CTGGTGAAGTATAGGGAAAT+GGG | 0.406014 | 3_3:+68683951 | None:intergenic |
| CTATATCTGGAATTTCATCT+TGG | 0.406188 | 3_3:+68683018 | None:intergenic |
| TTACAATTCAAACGTGCATC+GGG | 0.418015 | 3_3:-68683833 | Msa0467400:CDS |
| CAATCTAGTAGCTTATTCTT+GGG | 0.419995 | 3_3:-68683520 | Msa0467400:CDS |
| GGTTTCCATCGCCATTGGTT+GGG | 0.422201 | 3_3:-68684661 | Msa0467400:five_prime_UTR |
| GAGGCTGGAACACCAGCTAT+TGG | 0.422236 | 3_3:-68681365 | Msa0467400:CDS |
| TTGATTACTTGTCTGGGATT+GGG | 0.425333 | 3_3:-68681316 | Msa0467400:CDS |
| TTGACGGTTGATGCACGAAC+AGG | 0.429519 | 3_3:+68684030 | None:intergenic |
| TTGACTTCTTTCGAAGGGGC+TGG | 0.434464 | 3_3:+68679889 | None:intergenic |
| CACAAACCTGGACGGAGGTT+CGG | 0.435387 | 3_3:+68681871 | None:intergenic |
| TGCAACATTTCTGGACCAAC+AGG | 0.438009 | 3_3:-68679815 | Msa0467400:intron |
| AATGCCTTCACAACAGCTGC+AGG | 0.442651 | 3_3:+68683874 | None:intergenic |
| CTCGTTTGACTTCTTTCGAA+GGG | 0.444579 | 3_3:+68679884 | None:intergenic |
| TCAAGGCCTATTGTAATTAG+TGG | 0.445195 | 3_3:+68679097 | None:intergenic |
| AGGCATCCACTAATTACAAT+AGG | 0.455313 | 3_3:-68679103 | Msa0467400:three_prime_UTR |
| TTACAGATGTGTGGGCCTAC+AGG | 0.456863 | 3_3:-68682168 | Msa0467400:intron |
| TACAGCGACAAGAAATATTA+CGG | 0.458605 | 3_3:-68684762 | None:intergenic |
| TGGCTTAAAAGTTGAACCTA+TGG | 0.459799 | 3_3:+68684703 | None:intergenic |
| TTCAGCTACTGCTTGATTGA+CGG | 0.459909 | 3_3:+68684014 | None:intergenic |
| CCTTAGTGTTGTAGAAATAG+AGG | 0.461757 | 3_3:+68679298 | None:intergenic |
| AAGTATAGGGAAATGGGGTC+TGG | 0.471495 | 3_3:+68683957 | None:intergenic |
| CAAATGGTTTCCATCGCCAT+TGG | 0.471565 | 3_3:-68684666 | Msa0467400:five_prime_UTR |
| TAAATACCGATGGAGGGGTT+GGG | 0.473325 | 3_3:+68679347 | None:intergenic |
| CATGGAGTGGCAATCAGATC+AGG | 0.475274 | 3_3:-68679381 | Msa0467400:CDS |
| TCCAGATATAGACAAATTGA+AGG | 0.478567 | 3_3:-68683006 | Msa0467400:CDS |
| GGCTTAAAAGTTGAACCTAT+GGG | 0.481775 | 3_3:+68684704 | None:intergenic |
| CTTCAATTCATTCAAGTAGT+CGG | 0.482994 | 3_3:-68679229 | Msa0467400:exon |
| GACTGTACATCAGTTAGGAT+TGG | 0.484410 | 3_3:-68679179 | Msa0467400:three_prime_UTR |
| TCCATTGCTAAACACCCAAT+AGG | 0.492183 | 3_3:+68684153 | None:intergenic |
| TCCTATTGGGTGTTTAGCAA+TGG | 0.495765 | 3_3:-68684154 | Msa0467400:exon |
| GAACAGCAATAACTGGGGCT+TGG | 0.497888 | 3_3:+68684111 | None:intergenic |
| TGGTTTCCATCGCCATTGGT+TGG | 0.499995 | 3_3:-68684662 | Msa0467400:five_prime_UTR |
| ACTCACCTCATACTCATGTA+TGG | 0.501136 | 3_3:+68681286 | None:intergenic |
| AGAAATGTTGCAAGATCAGT+AGG | 0.504435 | 3_3:+68679826 | None:intergenic |
| CAGCAATTGATTACTTGTCT+GGG | 0.508847 | 3_3:-68681322 | Msa0467400:CDS |
| TACCATACTAGATTTGAGGC+TGG | 0.512947 | 3_3:-68681380 | Msa0467400:intron |
| GCAAGCCATACATGAGTATG+AGG | 0.513803 | 3_3:-68681291 | Msa0467400:intron |
| CTGACAGAAGCCTTTCATAC+AGG | 0.515663 | 3_3:+68679935 | None:intergenic |
| ATGTGTGGGCCTACAGGCAT+TGG | 0.516246 | 3_3:-68682162 | Msa0467400:CDS |
| GAGGTTCTTGGGGAAGATGA+TGG | 0.516444 | 3_3:+68684550 | None:intergenic |
| CATCATGTTTCAAATGTGCT+TGG | 0.517203 | 3_3:-68682948 | Msa0467400:intron |
| AAAAGTTGAACCTATGGGGT+TGG | 0.517238 | 3_3:+68684709 | None:intergenic |
| CTAAATACCGATGGAGGGGT+TGG | 0.521306 | 3_3:+68679346 | None:intergenic |
| TATGGTGTACTCTTTCACAT+TGG | 0.523034 | 3_3:-68678955 | Msa0467400:three_prime_UTR |
| CCATTTCCCTATACTTCACC+AGG | 0.523096 | 3_3:-68683950 | Msa0467400:CDS |
| GACATGTTATTCCACAATCA+AGG | 0.528092 | 3_3:+68679080 | None:intergenic |
| GATATTGCACACTGGGCACA+TGG | 0.530497 | 3_3:-68682369 | Msa0467400:CDS |
| TCCCAAATATTCGCATCTAT+GGG | 0.531604 | 3_3:-68679912 | Msa0467400:CDS |
| CCAATTGCTTCACCAATAGC+TGG | 0.533136 | 3_3:+68681353 | None:intergenic |
| ATTTATGTATTACAAAATGC+CGG | 0.533358 | 3_3:-68679045 | Msa0467400:three_prime_UTR |
| ACCACATCACGTGTCAGACT+TGG | 0.534095 | 3_3:-68684075 | Msa0467400:CDS |
| GTGATTGAACAGCAATAACT+GGG | 0.535039 | 3_3:+68684105 | None:intergenic |
| CACGTGTCGGATCAAGCAAA+TGG | 0.535997 | 3_3:-68684682 | Msa0467400:five_prime_UTR |
| GCACACTGGGCACATGGGGT+TGG | 0.536529 | 3_3:-68682363 | Msa0467400:CDS |
| TTATGATGATCAGAGCTTAG+TGG | 0.536844 | 3_3:+68684474 | None:intergenic |
| GAACAGGGAGATAAGTTAAA+CGG | 0.538325 | 3_3:+68684046 | None:intergenic |
| TGAACATCAACCACCATGTG+TGG | 0.542670 | 3_3:+68682306 | None:intergenic |
| GTTACAATTCAAACGTGCAT+CGG | 0.544500 | 3_3:-68683834 | Msa0467400:CDS |
| CTTATGCCGAACCTCCGTCC+AGG | 0.545005 | 3_3:-68681877 | Msa0467400:intron |
| ATCATAATTCAATTCATACT+AGG | 0.547474 | 3_3:-68684458 | Msa0467400:intron |
| GGAAATGGGGTCTGGTAGTG+TGG | 0.550619 | 3_3:+68683965 | None:intergenic |
| TGGGTACATACCTGTATGAA+AGG | 0.550622 | 3_3:-68679945 | Msa0467400:CDS |
| GCATTGCAAGACTATTATGA+AGG | 0.553126 | 3_3:-68683856 | Msa0467400:CDS |
| TATTAGAGATATTGCACACT+GGG | 0.555135 | 3_3:-68682376 | Msa0467400:CDS |
| CCTCTATTTCTACAACACTA+AGG | 0.555763 | 3_3:-68679298 | Msa0467400:CDS |
| TCTTGTTGCTTCTTCTCACA+AGG | 0.556164 | 3_3:-68682265 | Msa0467400:intron |
| AATCTAGTAGCTTATTCTTG+GGG | 0.557727 | 3_3:-68683519 | Msa0467400:CDS |
| CAACAAGAAAATCAGCATCA+AGG | 0.558160 | 3_3:+68682280 | None:intergenic |
| CCCAACCCAACCAATGGCGA+TGG | 0.558816 | 3_3:+68684656 | None:intergenic |
| ATTACAATAGGCCTTGATTG+TGG | 0.563749 | 3_3:-68679091 | Msa0467400:three_prime_UTR |
| CATTTGCTTGATCCGACACG+TGG | 0.567329 | 3_3:+68684683 | None:intergenic |
| GAAGCCTGCAGCTGTTGTGA+AGG | 0.567977 | 3_3:-68683878 | Msa0467400:CDS |
| GTGTTGCAGCAAATGTATAC+CGG | 0.574227 | 3_3:+68679026 | None:intergenic |
| GCTCGTTTGACTTCTTTCGA+AGG | 0.577103 | 3_3:+68679883 | None:intergenic |
| CTGGTAGTGTGGCCCAAAGA+GGG | 0.578324 | 3_3:+68683976 | None:intergenic |
| TGACCCCTAAATACCGATGG+AGG | 0.582901 | 3_3:+68679340 | None:intergenic |
| ACCCCTAAATACCGATGGAG+GGG | 0.591422 | 3_3:+68679342 | None:intergenic |
| ATCACAGTGCAATTGTTCCA+TGG | 0.591462 | 3_3:-68683091 | Msa0467400:CDS |
| CATGTGTGGAACACTCTGGC+AGG | 0.593828 | 3_3:+68682320 | None:intergenic |
| GGCTTGTCAAATTTAAAACA+AGG | 0.594239 | 3_3:-68683498 | Msa0467400:CDS |
| GACCCCTAAATACCGATGGA+GGG | 0.595603 | 3_3:+68679341 | None:intergenic |
| CTGCCAGAGTGTTCCACACA+TGG | 0.600132 | 3_3:-68682319 | Msa0467400:CDS |
| TCTGGTAGTGTGGCCCAAAG+AGG | 0.600966 | 3_3:+68683975 | None:intergenic |
| AGAAGCTGACTGTGTCATGA+AGG | 0.602015 | 3_3:+68679250 | None:intergenic |
| CATTGACCCCTAAATACCGA+TGG | 0.603227 | 3_3:+68679337 | None:intergenic |
| TCGTTTGACTTCTTTCGAAG+GGG | 0.606212 | 3_3:+68679885 | None:intergenic |
| AACCTGTCTTACAGATGTGT+GGG | 0.606697 | 3_3:-68682176 | Msa0467400:intron |
| GAACCTGTCTTACAGATGTG+TGG | 0.607400 | 3_3:-68682177 | Msa0467400:intron |
| ATTGTGCCCAACCCCTCCAT+CGG | 0.607814 | 3_3:-68679353 | Msa0467400:CDS |
| AAAGAGGGAGAACTAAGAGT+TGG | 0.613517 | 3_3:+68683991 | None:intergenic |
| ACATAATCAACCAACCCCAT+AGG | 0.613971 | 3_3:-68684719 | Msa0467400:five_prime_UTR |
| TATTGCACACTGGGCACATG+GGG | 0.615050 | 3_3:-68682367 | Msa0467400:CDS |
| CCACCATGTGTGGAACACTC+TGG | 0.619780 | 3_3:+68682316 | None:intergenic |
| GCTTAAAAGTTGAACCTATG+GGG | 0.627944 | 3_3:+68684705 | None:intergenic |
| TGACGGTTGATGCACGAACA+GGG | 0.628972 | 3_3:+68684031 | None:intergenic |
| GATGGAGGGGTTGGGCACAA+TGG | 0.630626 | 3_3:+68679355 | None:intergenic |
| AAATTTAAAACAAGGAGATG+AGG | 0.633993 | 3_3:-68683490 | Msa0467400:intron |
| TATTTATGGATGTAGTGCAA+AGG | 0.635359 | 3_3:-68683643 | Msa0467400:intron |
| ATGGAGGCATGGAAGACAAG+AGG | 0.637474 | 3_3:+68682118 | None:intergenic |
| GCCAAGTCTGACACGTGATG+TGG | 0.638545 | 3_3:+68684074 | None:intergenic |
| ATCGGGGCATACATTACTTG+AGG | 0.641878 | 3_3:-68683816 | Msa0467400:intron |
| CTATTAGAGATATTGCACAC+TGG | 0.643145 | 3_3:-68682377 | Msa0467400:CDS |
| ATATTGCACACTGGGCACAT+GGG | 0.643244 | 3_3:-68682368 | Msa0467400:CDS |
| AGCTGATTCATACTCGTCTG+TGG | 0.647061 | 3_3:+68683620 | None:intergenic |
| ACGAGTATGAATCAGCTAGA+CGG | 0.649988 | 3_3:-68683614 | Msa0467400:CDS |
| AGCTTAGTGGAGAACAGCGG+CGG | 0.652892 | 3_3:+68684487 | None:intergenic |
| TGGTGAAGTATAGGGAAATG+GGG | 0.664059 | 3_3:+68683952 | None:intergenic |
| GAAGCTGACTGTGTCATGAA+GGG | 0.666176 | 3_3:+68679251 | None:intergenic |
| TATAAGAATCCAATGCCTGT+AGG | 0.671673 | 3_3:+68682153 | None:intergenic |
| GTATGAATCAGCTAGACGGA+AGG | 0.672338 | 3_3:-68683610 | Msa0467400:CDS |
| ACCCCTCCATCGGTATTTAG+GGG | 0.674227 | 3_3:-68679343 | Msa0467400:CDS |
| CTATTTCTACAACACTAAGG+AGG | 0.678567 | 3_3:-68679295 | Msa0467400:CDS |
| GAAATGTTGCAAGATCAGTA+GGG | 0.688737 | 3_3:+68679827 | None:intergenic |
| CCAGAGTGTTCCACACATGG+TGG | 0.696122 | 3_3:-68682316 | Msa0467400:CDS |
| AAGTTCACAAACCTGGACGG+AGG | 0.708907 | 3_3:+68681866 | None:intergenic |
| TACAATTCAAACGTGCATCG+GGG | 0.710508 | 3_3:-68683832 | Msa0467400:CDS |
| TGACTGTGTCATGAAGGGCA+TGG | 0.747037 | 3_3:+68679256 | None:intergenic |
| CAGAGCTTAGTGGAGAACAG+CGG | 0.747768 | 3_3:+68684484 | None:intergenic |
| CAGGGAGATAAGTTAAACGG+CGG | 0.749242 | 3_3:+68684049 | None:intergenic |
| TGATTGAACAGCAATAACTG+GGG | 0.771247 | 3_3:+68684106 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTATTTAATTCCATTT+TGG | - | chr3_3:68679243-68679262 | Msa0467400:CDS | 10.0% |
| !!! | TAAACAATTTTTTTTGAAAA+AGG | - | chr3_3:68683942-68683961 | Msa0467400:CDS | 10.0% |
| !! | TCATGTTTAAAAATTTAGAT+GGG | + | chr3_3:68680297-68680316 | None:intergenic | 15.0% |
| !!! | TTGTACATATTTTTAAGATT+CGG | - | chr3_3:68680324-68680343 | Msa0467400:intron | 15.0% |
| !!! | TAGTGTAATTATTTTTTGTT+TGG | - | chr3_3:68680466-68680485 | Msa0467400:intron | 15.0% |
| !! | TATAATAACTTACCTAAAAA+TGG | + | chr3_3:68681567-68681586 | None:intergenic | 15.0% |
| !! | AAAACAAAATCTTATTAACA+TGG | + | chr3_3:68681680-68681699 | None:intergenic | 15.0% |
| !!! | TGTATATCATTTTTAAGATA+AGG | + | chr3_3:68681845-68681864 | None:intergenic | 15.0% |
| !! | ATCTTAAAAATGATATACAT+TGG | - | chr3_3:68681846-68681865 | Msa0467400:intron | 15.0% |
| !! | TCTATAACCAAAAAATTATT+TGG | - | chr3_3:68682031-68682050 | Msa0467400:intron | 15.0% |
| !! | TATCTTATTATTATATCTGA+GGG | - | chr3_3:68682255-68682274 | Msa0467400:intron | 15.0% |
| !!! | TTATTCATAAACTTTTGTAT+AGG | - | chr3_3:68684028-68684047 | Msa0467400:CDS | 15.0% |
| !! | ATAAAAAATTAACTAATGAC+AGG | + | chr3_3:68684078-68684097 | None:intergenic | 15.0% |
| !!! | TTTGTAATACATAAATTTTC+AGG | + | chr3_3:68684614-68684633 | None:intergenic | 15.0% |
| !! | ATCATAATTCAATTCATACT+AGG | - | chr3_3:68679205-68679224 | Msa0467400:three_prime_UTR | 20.0% |
| !! | GGTATTTATTGTGTTAAATT+TGG | - | chr3_3:68679868-68679887 | Msa0467400:CDS | 20.0% |
| !! | CATGTTTAAAAATTTAGATG+GGG | + | chr3_3:68680296-68680315 | None:intergenic | 20.0% |
| !! | CTCATGTTTAAAAATTTAGA+TGG | + | chr3_3:68680298-68680317 | None:intergenic | 20.0% |
| !! | ATCAAATGTGATATTGAAAT+AGG | - | chr3_3:68680372-68680391 | Msa0467400:intron | 20.0% |
| !!! | TTAATAGGTTTTGACATTAA+CGG | - | chr3_3:68680819-68680838 | Msa0467400:intron | 20.0% |
| !! | ATTTCCAATATTCAACTATA+AGG | - | chr3_3:68680983-68681002 | Msa0467400:intron | 20.0% |
| !! | TTTCCAATATTCAACTATAA+GGG | - | chr3_3:68680984-68681003 | Msa0467400:intron | 20.0% |
| !!! | ACCAAGTTTAAATGTTTTTA+GGG | + | chr3_3:68681092-68681111 | None:intergenic | 20.0% |
| !! | TTTAGGTAAGTTATTATACA+CGG | - | chr3_3:68681569-68681588 | Msa0467400:intron | 20.0% |
| !! | AATGATTTCAGATGTATATT+TGG | - | chr3_3:68681754-68681773 | Msa0467400:intron | 20.0% |
| !! | GTATCTTATTATTATATCTG+AGG | - | chr3_3:68682254-68682273 | Msa0467400:intron | 20.0% |
| !!! | AAATTGTTTTTTTCATGTTC+TGG | + | chr3_3:68683100-68683119 | None:intergenic | 20.0% |
| !! | ATTATAACGATAACATTGAA+GGG | + | chr3_3:68683310-68683329 | None:intergenic | 20.0% |
| !! | AATTATAACGATAACATTGA+AGG | + | chr3_3:68683311-68683330 | None:intergenic | 20.0% |
| !! | AAAATCATTAATTTAGCTAG+TGG | + | chr3_3:68683338-68683357 | None:intergenic | 20.0% |
| !!! | TTTCTCTAGAATAACTTAAA+AGG | + | chr3_3:68683997-68684016 | None:intergenic | 20.0% |
| !! | ATTTATGTATTACAAAATGC+CGG | - | chr3_3:68684618-68684637 | Msa0467400:five_prime_UTR | 20.0% |
| !! | TCAATGAATTTAGAGTAGAA+AGG | + | chr3_3:68679276-68679295 | None:intergenic | 25.0% |
| ! | CCATAAAACTAATTTGACAA+GGG | + | chr3_3:68679324-68679343 | None:intergenic | 25.0% |
| ! | ATTCAATTCAATGCAAGTTA+AGG | + | chr3_3:68679354-68679373 | None:intergenic | 25.0% |
| !!! | AAATATGCAACTTTTTTCTC+AGG | - | chr3_3:68679464-68679483 | Msa0467400:intron | 25.0% |
| !! | TGTTAAATTTGGAATTGCAT+TGG | - | chr3_3:68679879-68679898 | Msa0467400:CDS | 25.0% |
| ! | TTTACGTGCACAATTATTTA+TGG | - | chr3_3:68680006-68680025 | Msa0467400:intron | 25.0% |
| !! | AAATTTAAAACAAGGAGATG+AGG | - | chr3_3:68680173-68680192 | Msa0467400:intron | 25.0% |
| ! | TAAAAGAATAGAACTTCAAC+CGG | + | chr3_3:68680442-68680461 | None:intergenic | 25.0% |
| !! | TTTTACATGAGCATAGTTAT+TGG | + | chr3_3:68680505-68680524 | None:intergenic | 25.0% |
| ! | AAAAGTTTCTGTATTTGTAC+TGG | + | chr3_3:68680903-68680922 | None:intergenic | 25.0% |
| ! | TTACATACACTCATATAAAG+AGG | - | chr3_3:68680960-68680979 | Msa0467400:intron | 25.0% |
| ! | ACCCTAAAAACATTTAAACT+TGG | - | chr3_3:68681088-68681107 | Msa0467400:intron | 25.0% |
| !! | CACCAAGTTTAAATGTTTTT+AGG | + | chr3_3:68681093-68681112 | None:intergenic | 25.0% |
| !!! | AAAAAGCATTGAAACAATTG+GGG | + | chr3_3:68681148-68681167 | None:intergenic | 25.0% |
| !!! | GAAAAAGCATTGAAACAATT+GGG | + | chr3_3:68681149-68681168 | None:intergenic | 25.0% |
| !!! | TGAAAAAGCATTGAAACAAT+TGG | + | chr3_3:68681150-68681169 | None:intergenic | 25.0% |
| ! | TGGATTCTTATATGGTAAAA+TGG | - | chr3_3:68681521-68681540 | Msa0467400:intron | 25.0% |
| ! | AATAACTTACCTAAAAATGG+AGG | + | chr3_3:68681564-68681583 | None:intergenic | 25.0% |
| ! | AGAAAAAATCCTGTTTGTTT+AGG | - | chr3_3:68681652-68681671 | Msa0467400:intron | 25.0% |
| !! | TTTTGTAGCTAATACATTTC+CGG | - | chr3_3:68681696-68681715 | Msa0467400:intron | 25.0% |
| !! | AAAAATGATATACATTGGCT+TGG | - | chr3_3:68681851-68681870 | Msa0467400:intron | 25.0% |
| !!! | AAAATGATATACATTGGCTT+GGG | - | chr3_3:68681852-68681871 | Msa0467400:intron | 25.0% |
| !!! | TTTTGGTTATAGAATCCTAT+GGG | + | chr3_3:68682024-68682043 | None:intergenic | 25.0% |
| !!! | TTTTTGGTTATAGAATCCTA+TGG | + | chr3_3:68682025-68682044 | None:intergenic | 25.0% |
| !!! | TGGTAGACCAAATAATTTTT+TGG | + | chr3_3:68682041-68682060 | None:intergenic | 25.0% |
| ! | ATTGACAACGATCATTTAAA+TGG | + | chr3_3:68682061-68682080 | None:intergenic | 25.0% |
| ! | GATACAATACAAGTAATTGA+TGG | + | chr3_3:68682239-68682258 | None:intergenic | 25.0% |
| !! | ATTTTACCATACTAGATTTG+AGG | - | chr3_3:68682279-68682298 | Msa0467400:CDS | 25.0% |
| ! | TTTATAGTCAATAAGACTGA+AGG | + | chr3_3:68682406-68682425 | None:intergenic | 25.0% |
| ! | AAATCAACTAAATCATAACG+AGG | + | chr3_3:68682618-68682637 | None:intergenic | 25.0% |
| ! | AAATACAAGAATAAACCACA+GGG | + | chr3_3:68682818-68682837 | None:intergenic | 25.0% |
| ! | TAAATACAAGAATAAACCAC+AGG | + | chr3_3:68682819-68682838 | None:intergenic | 25.0% |
| ! | AGATTCACTTCTAATCATTT+GGG | - | chr3_3:68682870-68682889 | Msa0467400:intron | 25.0% |
| !! | AGCTTAACTACAAGTTATTT+TGG | + | chr3_3:68683026-68683045 | None:intergenic | 25.0% |
| ! | AATATACATTAATGAGGTTG+AGG | + | chr3_3:68683260-68683279 | None:intergenic | 25.0% |
| !! | GCTTTGAATATACATTAATG+AGG | + | chr3_3:68683266-68683285 | None:intergenic | 25.0% |
| !! | CAAAATCAGTTTTCATATAG+AGG | - | chr3_3:68683416-68683435 | Msa0467400:intron | 25.0% |
| ! | TTAACACTTATTCTCTTGTT+GGG | + | chr3_3:68683567-68683586 | None:intergenic | 25.0% |
| ! | TTTAACACTTATTCTCTTGT+TGG | + | chr3_3:68683568-68683587 | None:intergenic | 25.0% |
| !! | TATGAAATCCAAATTTTCAC+AGG | - | chr3_3:68683689-68683708 | Msa0467400:intron | 25.0% |
| ! | AACAAGAAAATGTATATAGC+TGG | + | chr3_3:68683895-68683914 | None:intergenic | 25.0% |
| ! | AATAAGTTAAAAACAACCCA+TGG | - | chr3_3:68684051-68684070 | Msa0467400:CDS | 25.0% |
| ! | TTAGTAATTGATTACAGACT+AGG | + | chr3_3:68684172-68684191 | None:intergenic | 25.0% |
| !! | TACTAAATTGCCCAAATTTT+CGG | - | chr3_3:68684186-68684205 | Msa0467400:five_prime_UTR | 25.0% |
| !!! | GTAATACATAAATTTTCAGG+AGG | + | chr3_3:68684611-68684630 | None:intergenic | 25.0% |
| ! | AATTTATACTCGCAATAGTA+TGG | - | chr3_3:68684690-68684709 | Msa0467400:five_prime_UTR | 25.0% |
| ! | AATTTAGAGTAGAAAGGAGA+GGG | + | chr3_3:68679270-68679289 | None:intergenic | 30.0% |
| AAAACTAATTTGACAAGGGT+AGG | + | chr3_3:68679320-68679339 | None:intergenic | 30.0% | |
| !!! | CCCTTGTCAAATTAGTTTTA+TGG | - | chr3_3:68679321-68679340 | Msa0467400:CDS | 30.0% |
| GCCATAAAACTAATTTGACA+AGG | + | chr3_3:68679325-68679344 | None:intergenic | 30.0% | |
| CATTGAATTGAATTTCCTGA+TGG | - | chr3_3:68679361-68679380 | Msa0467400:CDS | 30.0% | |
| !!! | AGATTTTGGAATTCTCCTAT+TGG | - | chr3_3:68679495-68679514 | Msa0467400:intron | 30.0% |
| !!! | GATTTTGGAATTCTCCTATT+GGG | - | chr3_3:68679496-68679515 | Msa0467400:intron | 30.0% |
| ! | TTGGAATTGCATTGGTAATT+TGG | - | chr3_3:68679887-68679906 | Msa0467400:CDS | 30.0% |
| TAATTGTGCACGTAAACATT+TGG | + | chr3_3:68680002-68680021 | None:intergenic | 30.0% | |
| TATTTATGGATGTAGTGCAA+AGG | - | chr3_3:68680020-68680039 | Msa0467400:intron | 30.0% | |
| TCAATCTAGTAGCTTATTCT+TGG | - | chr3_3:68680142-68680161 | Msa0467400:intron | 30.0% | |
| CAATCTAGTAGCTTATTCTT+GGG | - | chr3_3:68680143-68680162 | Msa0467400:intron | 30.0% | |
| AATCTAGTAGCTTATTCTTG+GGG | - | chr3_3:68680144-68680163 | Msa0467400:intron | 30.0% | |
| ! | GGCTTGTCAAATTTAAAACA+AGG | - | chr3_3:68680165-68680184 | Msa0467400:intron | 30.0% |
| !!! | ATGTTTGGATTAGCGTATTT+TGG | - | chr3_3:68680239-68680258 | Msa0467400:intron | 30.0% |
| !! | GAAATAGGAGTTTTAATACC+AGG | - | chr3_3:68680387-68680406 | Msa0467400:intron | 30.0% |
| AAAAGAATAGAACTTCAACC+GGG | + | chr3_3:68680441-68680460 | None:intergenic | 30.0% | |
| CAATTAGTAGCTCAAAAAGT+TGG | - | chr3_3:68680595-68680614 | Msa0467400:intron | 30.0% | |
| ! | CTATATCTGGAATTTCATCT+TGG | + | chr3_3:68680648-68680667 | None:intergenic | 30.0% |
| TCCAGATATAGACAAATTGA+AGG | - | chr3_3:68680657-68680676 | Msa0467400:intron | 30.0% | |
| TCCTTCAATTTGTCTATATC+TGG | + | chr3_3:68680661-68680680 | None:intergenic | 30.0% | |
| AGTCCCTTATAGTTGAATAT+TGG | + | chr3_3:68680990-68681009 | None:intergenic | 30.0% | |
| ! | CATGTTTGCTAAGTACTAAT+CGG | + | chr3_3:68681031-68681050 | None:intergenic | 30.0% |
| !! | AAAAGCATTGAAACAATTGG+GGG | + | chr3_3:68681147-68681166 | None:intergenic | 30.0% |
| CTATCATTGTGGAAAATAAG+AGG | + | chr3_3:68681181-68681200 | None:intergenic | 30.0% | |
| !! | GAGTAAAAGTACTATCATTG+TGG | + | chr3_3:68681192-68681211 | None:intergenic | 30.0% |
| TATTAGAGATATTGCACACT+GGG | - | chr3_3:68681287-68681306 | Msa0467400:intron | 30.0% | |
| ACATGAACAACTGGTTAAAA+TGG | - | chr3_3:68681617-68681636 | Msa0467400:intron | 30.0% | |
| GAAAAAAAAGTTCACAAACC+TGG | + | chr3_3:68681807-68681826 | None:intergenic | 30.0% | |
| TTTGGTTATAGAATCCTATG+GGG | + | chr3_3:68682023-68682042 | None:intergenic | 30.0% | |
| AGAGTTTCCATTTCTTATCT+TGG | - | chr3_3:68682100-68682119 | Msa0467400:intron | 30.0% | |
| GAGTTTCCATTTCTTATCTT+GGG | - | chr3_3:68682101-68682120 | Msa0467400:intron | 30.0% | |
| AAATGACTGTAGGTTATGAA+TGG | + | chr3_3:68682170-68682189 | None:intergenic | 30.0% | |
| AGAAAACTAGAGTAATTCAC+AGG | - | chr3_3:68682425-68682444 | Msa0467400:intron | 30.0% | |
| !! | GGTATCATCTTTTGAAAATC+TGG | - | chr3_3:68682689-68682708 | Msa0467400:intron | 30.0% |
| GAGATTCACTTCTAATCATT+TGG | - | chr3_3:68682869-68682888 | Msa0467400:intron | 30.0% | |
| GAAGAAGTAAAACAACAATC+AGG | + | chr3_3:68683194-68683213 | None:intergenic | 30.0% | |
| ! | TTTTCATATAGAGGATTGCT+AGG | - | chr3_3:68683425-68683444 | Msa0467400:intron | 30.0% |
| TTATTAGGTGGAAACAATGT+AGG | - | chr3_3:68683486-68683505 | Msa0467400:intron | 30.0% | |
| TTGTTGGGTTAAATCAATGT+AGG | + | chr3_3:68683552-68683571 | None:intergenic | 30.0% | |
| TATTTCATCTTCTTACCTGT+TGG | + | chr3_3:68683866-68683885 | None:intergenic | 30.0% | |
| AGTGTGTATGTCATGAAATA+AGG | - | chr3_3:68684121-68684140 | Msa0467400:CDS | 30.0% | |
| TAATTGATTACAGACTAGGA+AGG | + | chr3_3:68684168-68684187 | None:intergenic | 30.0% | |
| CCAATTACTACCGAAAATTT+GGG | + | chr3_3:68684199-68684218 | None:intergenic | 30.0% | |
| TCCAATTACTACCGAAAATT+TGG | + | chr3_3:68684200-68684219 | None:intergenic | 30.0% | |
| ! | ATGATGTATCATTTTCAGCA+TGG | - | chr3_3:68684264-68684283 | Msa0467400:intron | 30.0% |
| CTTCAATTCATTCAAGTAGT+CGG | - | chr3_3:68684434-68684453 | Msa0467400:intron | 30.0% | |
| !!! | ATTTTGACTGTACATCAGTT+AGG | - | chr3_3:68684479-68684498 | Msa0467400:five_prime_UTR | 30.0% |
| !! | TTAGGATTGGTTCAATTGAT+AGG | - | chr3_3:68684497-68684516 | Msa0467400:intron | 30.0% |
| GCTTAAAAGTTGAACCTATG+GGG | + | chr3_3:68678961-68678980 | None:intergenic | 35.0% | |
| GGCTTAAAAGTTGAACCTAT+GGG | + | chr3_3:68678962-68678981 | None:intergenic | 35.0% | |
| TGGCTTAAAAGTTGAACCTA+TGG | + | chr3_3:68678963-68678982 | None:intergenic | 35.0% | |
| TTATGATGATCAGAGCTTAG+TGG | + | chr3_3:68679192-68679211 | None:intergenic | 35.0% | |
| ! | GAATTTAGAGTAGAAAGGAG+AGG | + | chr3_3:68679271-68679290 | None:intergenic | 35.0% |
| ! | AAGGGTAGGTTTGTTTAGTT+TGG | + | chr3_3:68679306-68679325 | None:intergenic | 35.0% |
| ! | AATTTCCTGATGGTGTTTGT+TGG | - | chr3_3:68679371-68679390 | Msa0467400:CDS | 35.0% |
| ! | CTCAGGTATAACTGAGATTT+TGG | - | chr3_3:68679481-68679500 | Msa0467400:intron | 35.0% |
| TGATTGAACAGCAATAACTG+GGG | + | chr3_3:68679560-68679579 | None:intergenic | 35.0% | |
| GTGATTGAACAGCAATAACT+GGG | + | chr3_3:68679561-68679580 | None:intergenic | 35.0% | |
| AGTGATTGAACAGCAATAAC+TGG | + | chr3_3:68679562-68679581 | None:intergenic | 35.0% | |
| GAACAGGGAGATAAGTTAAA+CGG | + | chr3_3:68679620-68679639 | None:intergenic | 35.0% | |
| TTACTTCCTGGTGAAGTATA+GGG | + | chr3_3:68679722-68679741 | None:intergenic | 35.0% | |
| TTTACTTCCTGGTGAAGTAT+AGG | + | chr3_3:68679723-68679742 | None:intergenic | 35.0% | |
| ATACTTCACCAGGAAGTAAA+TGG | - | chr3_3:68679723-68679742 | Msa0467400:intron | 35.0% | |
| GCATTGCAAGACTATTATGA+AGG | - | chr3_3:68679807-68679826 | Msa0467400:intron | 35.0% | |
| GTTACAATTCAAACGTGCAT+CGG | - | chr3_3:68679829-68679848 | Msa0467400:CDS | 35.0% | |
| TTACAATTCAAACGTGCATC+GGG | - | chr3_3:68679830-68679849 | Msa0467400:CDS | 35.0% | |
| ! | GAATTGCATTGGTAATTTGG+AGG | - | chr3_3:68679890-68679909 | Msa0467400:CDS | 35.0% |
| !! | ATTTCAACTTGCTGCATGTT+TGG | - | chr3_3:68680224-68680243 | Msa0467400:intron | 35.0% |
| !! | TTAAGATTCGGAGAGTGTTA+AGG | - | chr3_3:68680336-68680355 | Msa0467400:intron | 35.0% |
| !! | ATAGGAGTTTTAATACCAGG+AGG | - | chr3_3:68680390-68680409 | Msa0467400:intron | 35.0% |
| ! | TTTTGAGCTACTAATTGCCA+TGG | + | chr3_3:68680592-68680611 | None:intergenic | 35.0% |
| CATCATGTTTCAAATGTGCT+TGG | - | chr3_3:68680715-68680734 | Msa0467400:intron | 35.0% | |
| ! | TTTTGACATTAACGGTCTTC+TGG | - | chr3_3:68680827-68680846 | Msa0467400:intron | 35.0% |
| TATTGGGTCTCAATATGCAT+AGG | + | chr3_3:68681059-68681078 | None:intergenic | 35.0% | |
| !!! | AATGTTTTTAGGGTCACGTT+GGG | + | chr3_3:68681082-68681101 | None:intergenic | 35.0% |
| !!! | AAATGTTTTTAGGGTCACGT+TGG | + | chr3_3:68681083-68681102 | None:intergenic | 35.0% |
| CAGTGTGCAATATCTCTAAT+AGG | + | chr3_3:68681288-68681307 | None:intergenic | 35.0% | |
| CTATTAGAGATATTGCACAC+TGG | - | chr3_3:68681286-68681305 | Msa0467400:intron | 35.0% | |
| CAACAAGAAAATCAGCATCA+AGG | + | chr3_3:68681386-68681405 | None:intergenic | 35.0% | |
| TATAAGAATCCAATGCCTGT+AGG | + | chr3_3:68681513-68681532 | None:intergenic | 35.0% | |
| !! | ACAGGCATTGGATTCTTATA+TGG | - | chr3_3:68681513-68681532 | Msa0467400:intron | 35.0% |
| TCCTATCAAACATGAACAAC+TGG | - | chr3_3:68681608-68681627 | Msa0467400:intron | 35.0% | |
| ACCAGTTGTTCATGTTTGAT+AGG | + | chr3_3:68681612-68681631 | None:intergenic | 35.0% | |
| AAAAAGTTCACAAACCTGGA+CGG | + | chr3_3:68681803-68681822 | None:intergenic | 35.0% | |
| ! | TGGCTTTTGATGTTAGTCAT+TGG | - | chr3_3:68681988-68682007 | Msa0467400:intron | 35.0% |
| !! | ATTGGTATTTTGAACCCCAT+AGG | - | chr3_3:68682006-68682025 | Msa0467400:intron | 35.0% |
| ATCAGTCCCAAGATAAGAAA+TGG | + | chr3_3:68682110-68682129 | None:intergenic | 35.0% | |
| AAAAAATTAGCACTGTGAGG+CGG | + | chr3_3:68682197-68682216 | None:intergenic | 35.0% | |
| AGCAAAAAATTAGCACTGTG+AGG | + | chr3_3:68682200-68682219 | None:intergenic | 35.0% | |
| ATTGGTGAAGCAATTGGATT+AGG | - | chr3_3:68682316-68682335 | Msa0467400:CDS | 35.0% | |
| CAGCAATTGATTACTTGTCT+GGG | - | chr3_3:68682341-68682360 | Msa0467400:CDS | 35.0% | |
| ! | ATTGATTACTTGTCTGGGAT+TGG | - | chr3_3:68682346-68682365 | Msa0467400:CDS | 35.0% |
| ! | TTGATTACTTGTCTGGGATT+GGG | - | chr3_3:68682347-68682366 | Msa0467400:CDS | 35.0% |
| ACTAGAGTAATTCACAGGAA+AGG | - | chr3_3:68682430-68682449 | Msa0467400:intron | 35.0% | |
| TACTTTACTATCCTCTTCTG+TGG | - | chr3_3:68682502-68682521 | Msa0467400:intron | 35.0% | |
| !! | TGAAGCTTTTTCTCCTTCAT+GGG | - | chr3_3:68682668-68682687 | Msa0467400:intron | 35.0% |
| TCAAAAGATGATACCCATGA+AGG | + | chr3_3:68682684-68682703 | None:intergenic | 35.0% | |
| CAATCACTACATTAAGTGCT+TGG | + | chr3_3:68682751-68682770 | None:intergenic | 35.0% | |
| CTGGTCAAGTTAAACATTGT+CGG | + | chr3_3:68683081-68683100 | None:intergenic | 35.0% | |
| CAACAATCAGGATGACAAAA+TGG | + | chr3_3:68683182-68683201 | None:intergenic | 35.0% | |
| CCTAATAAGAAAGTGAGTGT+TGG | + | chr3_3:68683474-68683493 | None:intergenic | 35.0% | |
| CCAACACTCACTTTCTTATT+AGG | - | chr3_3:68683471-68683490 | Msa0467400:intron | 35.0% | |
| ACACTCACTTTCTTATTAGG+TGG | - | chr3_3:68683474-68683493 | Msa0467400:intron | 35.0% | |
| TAGGTCCTACTACTTTATGT+GGG | - | chr3_3:68683505-68683524 | Msa0467400:CDS | 35.0% | |
| TCCCAAATATTCGCATCTAT+GGG | - | chr3_3:68683751-68683770 | Msa0467400:intron | 35.0% | |
| GAAATGTTGCAAGATCAGTA+GGG | + | chr3_3:68683839-68683858 | None:intergenic | 35.0% | |
| AGAAATGTTGCAAGATCAGT+AGG | + | chr3_3:68683840-68683859 | None:intergenic | 35.0% | |
| TACTGATCTTGCAACATTTC+TGG | - | chr3_3:68683839-68683858 | Msa0467400:CDS | 35.0% | |
| TTAACTAATGACAGGTCCAT+GGG | + | chr3_3:68684070-68684089 | None:intergenic | 35.0% | |
| ATTAACTAATGACAGGTCCA+TGG | + | chr3_3:68684071-68684090 | None:intergenic | 35.0% | |
| ! | CCCAAATTTTCGGTAGTAAT+TGG | - | chr3_3:68684196-68684215 | Msa0467400:five_prime_UTR | 35.0% |
| ATTGGAATAGCTGTTGAACT+TGG | - | chr3_3:68684214-68684233 | Msa0467400:intron | 35.0% | |
| CCTTAGTGTTGTAGAAATAG+AGG | + | chr3_3:68684368-68684387 | None:intergenic | 35.0% | |
| !! | CCTCTATTTCTACAACACTA+AGG | - | chr3_3:68684365-68684384 | Msa0467400:intron | 35.0% |
| !! | CTATTTCTACAACACTAAGG+AGG | - | chr3_3:68684368-68684387 | Msa0467400:intron | 35.0% |
| AGGCATCCACTAATTACAAT+AGG | - | chr3_3:68684560-68684579 | Msa0467400:five_prime_UTR | 35.0% | |
| TCAAGGCCTATTGTAATTAG+TGG | + | chr3_3:68684569-68684588 | None:intergenic | 35.0% | |
| ATTACAATAGGCCTTGATTG+TGG | - | chr3_3:68684572-68684591 | Msa0467400:five_prime_UTR | 35.0% | |
| GACATGTTATTCCACAATCA+AGG | + | chr3_3:68684586-68684605 | None:intergenic | 35.0% | |
| TATGGTGTACTCTTTCACAT+TGG | - | chr3_3:68684708-68684727 | Msa0467400:five_prime_UTR | 35.0% | |
| ACATAATCAACCAACCCCAT+AGG | - | chr3_3:68678944-68678963 | Msa0467400:three_prime_UTR | 40.0% | |
| AAAAGTTGAACCTATGGGGT+TGG | + | chr3_3:68678957-68678976 | None:intergenic | 40.0% | |
| ! | TCAACTTTTAAGCCACGTGT+CGG | - | chr3_3:68678968-68678987 | Msa0467400:three_prime_UTR | 40.0% |
| ! | TTTTAACCCAACCCAACCAA+TGG | + | chr3_3:68679016-68679035 | None:intergenic | 40.0% |
| ATCATCCAACAAACACCATC+AGG | + | chr3_3:68679379-68679398 | None:intergenic | 40.0% | |
| TCCTATTGGGTGTTTAGCAA+TGG | - | chr3_3:68679509-68679528 | Msa0467400:intron | 40.0% | |
| TCCATTGCTAAACACCCAAT+AGG | + | chr3_3:68679513-68679532 | None:intergenic | 40.0% | |
| TTCAGCTACTGCTTGATTGA+CGG | + | chr3_3:68679652-68679671 | None:intergenic | 40.0% | |
| AAAGAGGGAGAACTAAGAGT+TGG | + | chr3_3:68679675-68679694 | None:intergenic | 40.0% | |
| ! | AACTCTTAGTTCTCCCTCTT+TGG | - | chr3_3:68679674-68679693 | Msa0467400:intron | 40.0% |
| ! | ACTCTTAGTTCTCCCTCTTT+GGG | - | chr3_3:68679675-68679694 | Msa0467400:intron | 40.0% |
| TGGTGAAGTATAGGGAAATG+GGG | + | chr3_3:68679714-68679733 | None:intergenic | 40.0% | |
| CTGGTGAAGTATAGGGAAAT+GGG | + | chr3_3:68679715-68679734 | None:intergenic | 40.0% | |
| !! | GTTTTGAGCCATTTACTTCC+TGG | + | chr3_3:68679734-68679753 | None:intergenic | 40.0% |
| TACAATTCAAACGTGCATCG+GGG | - | chr3_3:68679831-68679850 | Msa0467400:CDS | 40.0% | |
| ACGAGTATGAATCAGCTAGA+CGG | - | chr3_3:68680049-68680068 | Msa0467400:intron | 40.0% | |
| TTAATACCAGGAGGAGACAT+TGG | - | chr3_3:68680399-68680418 | Msa0467400:intron | 40.0% | |
| TAATACCAGGAGGAGACATT+GGG | - | chr3_3:68680400-68680419 | Msa0467400:intron | 40.0% | |
| ATCACAGTGCAATTGTTCCA+TGG | - | chr3_3:68680572-68680591 | Msa0467400:intron | 40.0% | |
| ACCTATTAAGTTAACCCAGC+AGG | + | chr3_3:68680808-68680827 | None:intergenic | 40.0% | |
| TTGAATCAACGTTGCATCGA+GGG | - | chr3_3:68680868-68680887 | Msa0467400:intron | 40.0% | |
| CAGAAGCTACAGAAAAGCAA+AGG | + | chr3_3:68681260-68681279 | None:intergenic | 40.0% | |
| ! | TCTTGTTGCTTCTTCTCACA+AGG | - | chr3_3:68681398-68681417 | Msa0467400:intron | 40.0% |
| !! | AGTAACTTGTTACACTGGTC+TGG | + | chr3_3:68681466-68681485 | None:intergenic | 40.0% |
| !! | GGTTCAGTAACTTGTTACAC+TGG | + | chr3_3:68681471-68681490 | None:intergenic | 40.0% |
| AACCTGTCTTACAGATGTGT+GGG | - | chr3_3:68681487-68681506 | Msa0467400:intron | 40.0% | |
| !! | TCTTCCATGCCTCCATTTTT+AGG | - | chr3_3:68681552-68681571 | Msa0467400:intron | 40.0% |
| CTTACCTAAAAATGGAGGCA+TGG | + | chr3_3:68681559-68681578 | None:intergenic | 40.0% | |
| AACATGGTGCCTAAACAAAC+AGG | + | chr3_3:68681664-68681683 | None:intergenic | 40.0% | |
| CCTGAAACAAGCAAAAGAAG+AGG | + | chr3_3:68681725-68681744 | None:intergenic | 40.0% | |
| ! | CCTCTTCTTTTGCTTGTTTC+AGG | - | chr3_3:68681722-68681741 | Msa0467400:intron | 40.0% |
| ! | CTTCTTTTGCTTGTTTCAGG+CGG | - | chr3_3:68681725-68681744 | Msa0467400:intron | 40.0% |
| !! | ATGATATACATTGGCTTGGG+TGG | - | chr3_3:68681855-68681874 | Msa0467400:intron | 40.0% |
| AGAAAGCTGAAGAGGATCAA+TGG | - | chr3_3:68681908-68681927 | Msa0467400:CDS | 40.0% | |
| TGACTAACATCAAAAGCCAG+AGG | + | chr3_3:68681987-68682006 | None:intergenic | 40.0% | |
| TGATCGTTGTCAATATCAGC+CGG | - | chr3_3:68682067-68682086 | Msa0467400:intron | 40.0% | |
| TTATCTTGGGACTGATACTC+TGG | - | chr3_3:68682114-68682133 | Msa0467400:CDS | 40.0% | |
| ! | TACCATACTAGATTTGAGGC+TGG | - | chr3_3:68682283-68682302 | Msa0467400:CDS | 40.0% |
| TTCCAGCCTCAAATCTAGTA+TGG | + | chr3_3:68682288-68682307 | None:intergenic | 40.0% | |
| GCAGCAATTGATTACTTGTC+TGG | - | chr3_3:68682340-68682359 | Msa0467400:CDS | 40.0% | |
| ACTCACCTCATACTCATGTA+TGG | + | chr3_3:68682380-68682399 | None:intergenic | 40.0% | |
| TTCAGCATCTACAGAAGGTA+TGG | + | chr3_3:68682652-68682671 | None:intergenic | 40.0% | |
| AAAGCTTCAGCATCTACAGA+AGG | + | chr3_3:68682657-68682676 | None:intergenic | 40.0% | |
| !! | CTGAAGCTTTTTCTCCTTCA+TGG | - | chr3_3:68682667-68682686 | Msa0467400:intron | 40.0% |
| CAGTAGATGGTTGAGCAAAT+TGG | + | chr3_3:68682719-68682738 | None:intergenic | 40.0% | |
| ! | CAATTTGCTCAACCATCTAC+TGG | - | chr3_3:68682717-68682736 | Msa0467400:intron | 40.0% |
| !! | TTGGCTTTATTGCCAGTAGA+TGG | + | chr3_3:68682732-68682751 | None:intergenic | 40.0% |
| ! | AGAATAAACCACAGGGTGTT+TGG | + | chr3_3:68682811-68682830 | None:intergenic | 40.0% |
| TTCTAATCATTTGGGAGCTG+TGG | - | chr3_3:68682878-68682897 | Msa0467400:intron | 40.0% | |
| GTAGGTCCTACTACTTTATG+TGG | - | chr3_3:68683504-68683523 | Msa0467400:CDS | 40.0% | |
| ! | AGGTCCAGCACTTTGAAAAT+GGG | + | chr3_3:68683532-68683551 | None:intergenic | 40.0% |
| ! | TAGGTCCAGCACTTTGAAAA+TGG | + | chr3_3:68683533-68683552 | None:intergenic | 40.0% |
| ! | AAATTTTCACAGGTCGAGCT+GGG | - | chr3_3:68683699-68683718 | Msa0467400:intron | 40.0% |
| TGGGTACATACCTGTATGAA+AGG | - | chr3_3:68683718-68683737 | Msa0467400:intron | 40.0% | |
| GTCCCAAATATTCGCATCTA+TGG | - | chr3_3:68683750-68683769 | Msa0467400:intron | 40.0% | |
| GCCCATAGATGCGAATATTT+GGG | + | chr3_3:68683755-68683774 | None:intergenic | 40.0% | |
| ! | TCGTTTGACTTCTTTCGAAG+GGG | + | chr3_3:68683781-68683800 | None:intergenic | 40.0% |
| ! | CTCGTTTGACTTCTTTCGAA+GGG | + | chr3_3:68683782-68683801 | None:intergenic | 40.0% |
| GAATAGCTGTTGAACTTGGT+TGG | - | chr3_3:68684218-68684237 | Msa0467400:intron | 40.0% | |
| ! | GTATCATTTTCAGCATGGAG+TGG | - | chr3_3:68684269-68684288 | Msa0467400:intron | 40.0% |
| GACTGTACATCAGTTAGGAT+TGG | - | chr3_3:68684484-68684503 | Msa0467400:five_prime_UTR | 40.0% | |
| ATGAGATCAGCAAGCGAAAT+TGG | + | chr3_3:68684537-68684556 | None:intergenic | 40.0% | |
| GTGTTGCAGCAAATGTATAC+CGG | + | chr3_3:68684640-68684659 | None:intergenic | 40.0% | |
| CAAATGGTTTCCATCGCCAT+TGG | - | chr3_3:68678997-68679016 | Msa0467400:three_prime_UTR | 45.0% | |
| AGACACAACAGAGGTTCTTG+GGG | + | chr3_3:68679126-68679145 | None:intergenic | 45.0% | |
| CAGACACAACAGAGGTTCTT+GGG | + | chr3_3:68679127-68679146 | None:intergenic | 45.0% | |
| AGAAAGGAGAGGGACCAAAA+TGG | + | chr3_3:68679260-68679279 | None:intergenic | 45.0% | |
| ! | TAACTGGGGCTTGGAAGTTT+TGG | + | chr3_3:68679546-68679565 | None:intergenic | 45.0% |
| CAGGGAGATAAGTTAAACGG+CGG | + | chr3_3:68679617-68679636 | None:intergenic | 45.0% | |
| AAGTATAGGGAAATGGGGTC+TGG | + | chr3_3:68679709-68679728 | None:intergenic | 45.0% | |
| CCTGGTGAAGTATAGGGAAA+TGG | + | chr3_3:68679716-68679735 | None:intergenic | 45.0% | |
| CCATTTCCCTATACTTCACC+AGG | - | chr3_3:68679713-68679732 | Msa0467400:intron | 45.0% | |
| ATCGGGGCATACATTACTTG+AGG | - | chr3_3:68679847-68679866 | Msa0467400:CDS | 45.0% | |
| CTTCCCCCTTCTGCATTTAA+CGG | - | chr3_3:68679930-68679949 | Msa0467400:CDS | 45.0% | |
| TTCCCCCTTCTGCATTTAAC+GGG | - | chr3_3:68679931-68679950 | Msa0467400:CDS | 45.0% | |
| ATCCCCCGTTAAATGCAGAA+GGG | + | chr3_3:68679938-68679957 | None:intergenic | 45.0% | |
| ! | AGCTGATTCATACTCGTCTG+TGG | + | chr3_3:68680046-68680065 | None:intergenic | 45.0% |
| GTATGAATCAGCTAGACGGA+AGG | - | chr3_3:68680053-68680072 | Msa0467400:intron | 45.0% | |
| AATACCAGGAGGAGACATTG+GGG | - | chr3_3:68680401-68680420 | Msa0467400:intron | 45.0% | |
| TGCTTGGTATGTTTCTCGTC+AGG | - | chr3_3:68680731-68680750 | Msa0467400:intron | 45.0% | |
| TGTCAAAGATATCTGCCTGC+TGG | - | chr3_3:68680790-68680809 | Msa0467400:intron | 45.0% | |
| GTCAAAGATATCTGCCTGCT+GGG | - | chr3_3:68680791-68680810 | Msa0467400:intron | 45.0% | |
| GCCTGCTGGGTTAACTTAAT+AGG | - | chr3_3:68680804-68680823 | Msa0467400:intron | 45.0% | |
| CTTGAATCAACGTTGCATCG+AGG | - | chr3_3:68680867-68680886 | Msa0467400:intron | 45.0% | |
| TTAGGGTCACGTTGGGTATT+GGG | + | chr3_3:68681075-68681094 | None:intergenic | 45.0% | |
| ! | TTTAGGGTCACGTTGGGTAT+TGG | + | chr3_3:68681076-68681095 | None:intergenic | 45.0% |
| AACAATTGGGGGCTGAAATG+AGG | + | chr3_3:68681136-68681155 | None:intergenic | 45.0% | |
| ATATTGCACACTGGGCACAT+GGG | - | chr3_3:68681295-68681314 | Msa0467400:CDS | 45.0% | |
| TGAACATCAACCACCATGTG+TGG | + | chr3_3:68681360-68681379 | None:intergenic | 45.0% | |
| GAACCTGTCTTACAGATGTG+TGG | - | chr3_3:68681486-68681505 | Msa0467400:intron | 45.0% | |
| CAAGCAAAAGAAGAGGTTGC+CGG | + | chr3_3:68681718-68681737 | None:intergenic | 45.0% | |
| !! | ATATACATTGGCTTGGGTGG+AGG | - | chr3_3:68681858-68681877 | Msa0467400:intron | 45.0% |
| TCAGCTTTCTTTCCTACGCA+GGG | + | chr3_3:68681898-68681917 | None:intergenic | 45.0% | |
| TTCAGCTTTCTTTCCTACGC+AGG | + | chr3_3:68681899-68681918 | None:intergenic | 45.0% | |
| CGTAGGAAAGAAAGCTGAAG+AGG | - | chr3_3:68681900-68681919 | Msa0467400:CDS | 45.0% | |
| TCAAAAGCCAGAGGAAGTGA+AGG | + | chr3_3:68681978-68681997 | None:intergenic | 45.0% | |
| GATCGTTGTCAATATCAGCC+GGG | - | chr3_3:68682068-68682087 | Msa0467400:intron | 45.0% | |
| ATCGTTGTCAATATCAGCCG+GGG | - | chr3_3:68682069-68682088 | Msa0467400:intron | 45.0% | |
| TCAATATCAGCCGGGGAAAA+AGG | - | chr3_3:68682076-68682095 | Msa0467400:intron | 45.0% | |
| ! | GGAAACTCTTCCTTTTTCCC+CGG | + | chr3_3:68682089-68682108 | None:intergenic | 45.0% |
| AGGCGGAGAAAAATGACTGT+AGG | + | chr3_3:68682180-68682199 | None:intergenic | 45.0% | |
| CCAATTGCTTCACCAATAGC+TGG | + | chr3_3:68682313-68682332 | None:intergenic | 45.0% | |
| CCAGCTATTGGTGAAGCAAT+TGG | - | chr3_3:68682310-68682329 | Msa0467400:CDS | 45.0% | |
| GCAAGCCATACATGAGTATG+AGG | - | chr3_3:68682372-68682391 | Msa0467400:CDS | 45.0% | |
| ATGAGATGTCACCACAGAAG+AGG | + | chr3_3:68682516-68682535 | None:intergenic | 45.0% | |
| TGGGTCCCACATAAAGTAGT+AGG | + | chr3_3:68683513-68683532 | None:intergenic | 45.0% | |
| CAGCTCGACCTGTGAAAATT+TGG | + | chr3_3:68683700-68683719 | None:intergenic | 45.0% | |
| ! | CAAATTTTCACAGGTCGAGC+TGG | - | chr3_3:68683698-68683717 | Msa0467400:intron | 45.0% |
| CTGACAGAAGCCTTTCATAC+AGG | + | chr3_3:68683731-68683750 | None:intergenic | 45.0% | |
| GGCCCATAGATGCGAATATT+TGG | + | chr3_3:68683756-68683775 | None:intergenic | 45.0% | |
| ! | GCTCGTTTGACTTCTTTCGA+AGG | + | chr3_3:68683783-68683802 | None:intergenic | 45.0% |
| ! | TGCAACATTTCTGGACCAAC+AGG | - | chr3_3:68683848-68683867 | Msa0467400:CDS | 45.0% |
| TAAATACCGATGGAGGGGTT+GGG | + | chr3_3:68684319-68684338 | None:intergenic | 45.0% | |
| AACCCCTCCATCGGTATTTA+GGG | - | chr3_3:68684319-68684338 | Msa0467400:intron | 45.0% | |
| CATTGACCCCTAAATACCGA+TGG | + | chr3_3:68684329-68684348 | None:intergenic | 45.0% | |
| GAAGCTGACTGTGTCATGAA+GGG | + | chr3_3:68684415-68684434 | None:intergenic | 45.0% | |
| AGAAGCTGACTGTGTCATGA+AGG | + | chr3_3:68684416-68684435 | None:intergenic | 45.0% | |
| ! | TCGCTTGCTGATCTCATGAT+AGG | - | chr3_3:68684540-68684559 | Msa0467400:intron | 45.0% |
| CATTTGCTTGATCCGACACG+TGG | + | chr3_3:68678983-68679002 | None:intergenic | 50.0% | |
| CACGTGTCGGATCAAGCAAA+TGG | - | chr3_3:68678981-68679000 | Msa0467400:three_prime_UTR | 50.0% | |
| TGGTTTCCATCGCCATTGGT+TGG | - | chr3_3:68679001-68679020 | Msa0467400:three_prime_UTR | 50.0% | |
| ! | GGTTTCCATCGCCATTGGTT+GGG | - | chr3_3:68679002-68679021 | Msa0467400:three_prime_UTR | 50.0% |
| GAGGTTCTTGGGGAAGATGA+TGG | + | chr3_3:68679116-68679135 | None:intergenic | 50.0% | |
| GCAGACACAACAGAGGTTCT+TGG | + | chr3_3:68679128-68679147 | None:intergenic | 50.0% | |
| CAGAGCTTAGTGGAGAACAG+CGG | + | chr3_3:68679182-68679201 | None:intergenic | 50.0% | |
| GAACAGCAATAACTGGGGCT+TGG | + | chr3_3:68679555-68679574 | None:intergenic | 50.0% | |
| TCTGACACGTGATGTGGTTC+TGG | + | chr3_3:68679586-68679605 | None:intergenic | 50.0% | |
| ACCACATCACGTGTCAGACT+TGG | - | chr3_3:68679588-68679607 | Msa0467400:intron | 50.0% | |
| ! | TGACGGTTGATGCACGAACA+GGG | + | chr3_3:68679635-68679654 | None:intergenic | 50.0% |
| ! | TTGACGGTTGATGCACGAAC+AGG | + | chr3_3:68679636-68679655 | None:intergenic | 50.0% |
| AATGCCTTCACAACAGCTGC+AGG | + | chr3_3:68679792-68679811 | None:intergenic | 50.0% | |
| CGTTAAATGCAGAAGGGGGA+AGG | + | chr3_3:68679932-68679951 | None:intergenic | 50.0% | |
| TCCCCCTTCTGCATTTAACG+GGG | - | chr3_3:68679932-68679951 | Msa0467400:CDS | 50.0% | |
| TCCCCCGTTAAATGCAGAAG+GGG | + | chr3_3:68679937-68679956 | None:intergenic | 50.0% | |
| CATCCCCCGTTAAATGCAGA+AGG | + | chr3_3:68679939-68679958 | None:intergenic | 50.0% | |
| ATACCAGGAGGAGACATTGG+GGG | - | chr3_3:68680402-68680421 | Msa0467400:intron | 50.0% | |
| GGGGGTTCTCTTTAATCACC+CGG | - | chr3_3:68680420-68680439 | Msa0467400:intron | 50.0% | |
| GATATTGCACACTGGGCACA+TGG | - | chr3_3:68681294-68681313 | Msa0467400:CDS | 50.0% | |
| TATTGCACACTGGGCACATG+GGG | - | chr3_3:68681296-68681315 | Msa0467400:CDS | 50.0% | |
| ! | TGTTACACTGGTCTGGACTC+TGG | + | chr3_3:68681459-68681478 | None:intergenic | 50.0% |
| TTACAGATGTGTGGGCCTAC+AGG | - | chr3_3:68681495-68681514 | Msa0467400:intron | 50.0% | |
| ! | ATGGAGGCATGGAAGACAAG+AGG | + | chr3_3:68681548-68681567 | None:intergenic | 50.0% |
| ! | CTTTTGCTTGTTTCAGGCGG+TGG | - | chr3_3:68681728-68681747 | Msa0467400:intron | 50.0% |
| AAGTTCACAAACCTGGACGG+AGG | + | chr3_3:68681800-68681819 | None:intergenic | 50.0% | |
| ACAGGTTTGATTCCCTGCGT+AGG | - | chr3_3:68681883-68681902 | Msa0467400:CDS | 50.0% | |
| CGTTTCTCCTTCACTTCCTC+TGG | - | chr3_3:68681968-68681987 | Msa0467400:intron | 50.0% | |
| TCTTGGGACTGATACTCTGG+TGG | - | chr3_3:68682117-68682136 | Msa0467400:CDS | 50.0% | |
| CATGCAGTTGAGTCACTTCC+AGG | - | chr3_3:68682777-68682796 | Msa0467400:intron | 50.0% | |
| ! | CATTGAAGGGCACAGAGACT+AGG | + | chr3_3:68683297-68683316 | None:intergenic | 50.0% |
| ! | GGGACCCATTTTCAAAGTGC+TGG | - | chr3_3:68683525-68683544 | Msa0467400:CDS | 50.0% |
| TTGACTTCTTTCGAAGGGGC+TGG | + | chr3_3:68683777-68683796 | None:intergenic | 50.0% | |
| CATGGAGTGGCAATCAGATC+AGG | - | chr3_3:68684282-68684301 | Msa0467400:intron | 50.0% | |
| CTAAATACCGATGGAGGGGT+TGG | + | chr3_3:68684320-68684339 | None:intergenic | 50.0% | |
| CAACCCCTCCATCGGTATTT+AGG | - | chr3_3:68684318-68684337 | Msa0467400:intron | 50.0% | |
| ACCCCTCCATCGGTATTTAG+GGG | - | chr3_3:68684320-68684339 | Msa0467400:intron | 50.0% | |
| ACCCCTAAATACCGATGGAG+GGG | + | chr3_3:68684324-68684343 | None:intergenic | 50.0% | |
| GACCCCTAAATACCGATGGA+GGG | + | chr3_3:68684325-68684344 | None:intergenic | 50.0% | |
| TGACCCCTAAATACCGATGG+AGG | + | chr3_3:68684326-68684345 | None:intergenic | 50.0% | |
| TGACTGTGTCATGAAGGGCA+TGG | + | chr3_3:68684410-68684429 | None:intergenic | 50.0% | |
| ! | TCCATCGCCATTGGTTGGGT+TGG | - | chr3_3:68679006-68679025 | Msa0467400:three_prime_UTR | 55.0% |
| ! | CCATCGCCATTGGTTGGGTT+GGG | - | chr3_3:68679007-68679026 | Msa0467400:three_prime_UTR | 55.0% |
| AGCTTAGTGGAGAACAGCGG+CGG | + | chr3_3:68679179-68679198 | None:intergenic | 55.0% | |
| GCCAAGTCTGACACGTGATG+TGG | + | chr3_3:68679592-68679611 | None:intergenic | 55.0% | |
| ! | CTGGTAGTGTGGCCCAAAGA+GGG | + | chr3_3:68679690-68679709 | None:intergenic | 55.0% |
| ! | TCTGGTAGTGTGGCCCAAAG+AGG | + | chr3_3:68679691-68679710 | None:intergenic | 55.0% |
| ! | GGAAATGGGGTCTGGTAGTG+TGG | + | chr3_3:68679701-68679720 | None:intergenic | 55.0% |
| GAAGCCTGCAGCTGTTGTGA+AGG | - | chr3_3:68679785-68679804 | Msa0467400:intron | 55.0% | |
| CCCCCGTTAAATGCAGAAGG+GGG | + | chr3_3:68679936-68679955 | None:intergenic | 55.0% | |
| CCCCCTTCTGCATTTAACGG+GGG | - | chr3_3:68679933-68679952 | Msa0467400:CDS | 55.0% | |
| CATGTGTGGAACACTCTGGC+AGG | + | chr3_3:68681346-68681365 | None:intergenic | 55.0% | |
| ! | CTGCCAGAGTGTTCCACACA+TGG | - | chr3_3:68681344-68681363 | Msa0467400:CDS | 55.0% |
| CCACCATGTGTGGAACACTC+TGG | + | chr3_3:68681350-68681369 | None:intergenic | 55.0% | |
| ! | CCAGAGTGTTCCACACATGG+TGG | - | chr3_3:68681347-68681366 | Msa0467400:CDS | 55.0% |
| GGCCCACACATCTGTAAGAC+AGG | + | chr3_3:68681492-68681511 | None:intergenic | 55.0% | |
| ATGTGTGGGCCTACAGGCAT+TGG | - | chr3_3:68681501-68681520 | Msa0467400:intron | 55.0% | |
| CACAAACCTGGACGGAGGTT+CGG | + | chr3_3:68681795-68681814 | None:intergenic | 55.0% | |
| GAGGCTGGAACACCAGCTAT+TGG | - | chr3_3:68682298-68682317 | Msa0467400:CDS | 55.0% | |
| !! | ACCACAGGGTGTTTGGCTCT+CGG | + | chr3_3:68682804-68682823 | None:intergenic | 55.0% |
| ATTGTGCCCAACCCCTCCAT+CGG | - | chr3_3:68684310-68684329 | Msa0467400:intron | 55.0% | |
| CCCAACCCAACCAATGGCGA+TGG | + | chr3_3:68679010-68679029 | None:intergenic | 60.0% | |
| GAACCCCCAATGTCTCCTCC+TGG | + | chr3_3:68680408-68680427 | None:intergenic | 60.0% | |
| CTTATGCCGAACCTCCGTCC+AGG | - | chr3_3:68681786-68681805 | Msa0467400:intron | 60.0% | |
| !! | TTGGCTTGGGTGGAGGTCAC+AGG | - | chr3_3:68681865-68681884 | Msa0467400:intron | 60.0% |
| ACCGAGAGCCAAACACCCTG+TGG | - | chr3_3:68682800-68682819 | Msa0467400:intron | 60.0% | |
| GATGGAGGGGTTGGGCACAA+TGG | + | chr3_3:68684311-68684330 | None:intergenic | 60.0% | |
| CGGCGAGGCAGACACAACAG+AGG | + | chr3_3:68679135-68679154 | None:intergenic | 65.0% | |
| CTGTTGTGTCTGCCTCGCCG+CGG | - | chr3_3:68679135-68679154 | Msa0467400:three_prime_UTR | 65.0% | |
| GCACACTGGGCACATGGGGT+TGG | - | chr3_3:68681300-68681319 | Msa0467400:CDS | 65.0% | |
| !! | GGGTGTTTGGCTCTCGGTCC+TGG | + | chr3_3:68682798-68682817 | None:intergenic | 65.0% |
| AACAGCGGCGGCGAGGGAAG+GGG | + | chr3_3:68679167-68679186 | None:intergenic | 70.0% | |
| GAACAGCGGCGGCGAGGGAA+GGG | + | chr3_3:68679168-68679187 | None:intergenic | 70.0% | |
| AGAACAGCGGCGGCGAGGGA+AGG | + | chr3_3:68679169-68679188 | None:intergenic | 70.0% | |
| GTGGAGAACAGCGGCGGCGA+GGG | + | chr3_3:68679173-68679192 | None:intergenic | 70.0% | |
| AGTGGAGAACAGCGGCGGCG+AGG | + | chr3_3:68679174-68679193 | None:intergenic | 70.0% | |
| ACAGCGGCGGCGAGGGAAGG+GGG | + | chr3_3:68679166-68679185 | None:intergenic | 75.0% | |
| !! | GAGGGAAGGGGGCGGTGCCG+CGG | + | chr3_3:68679155-68679174 | None:intergenic | 80.0% |
| !!! | AAGGGGGCGGTGCCGCGGCG+AGG | + | chr3_3:68679150-68679169 | None:intergenic | 85.0% |
| ! | GCGGCGGCGAGGGAAGGGGG+CGG | + | chr3_3:68679163-68679182 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 68678916 | 68684769 | 68678916 | ID=Msa0467400;Name=Msa0467400 |
| chr3_3 | mRNA | 68678916 | 68684769 | 68678916 | ID=Msa0467400-mRNA-1;Parent=Msa0467400;Name=Msa0467400-mRNA-1;_AED=0.10;_eAED=0.10;_QI=330|1|1|1|0.8|0.72|11|317|466 |
| chr3_3 | exon | 68678916 | 68679403 | 68678916 | ID=Msa0467400-mRNA-1:exon:15994;Parent=Msa0467400-mRNA-1 |
| chr3_3 | exon | 68679816 | 68679974 | 68679816 | ID=Msa0467400-mRNA-1:exon:15993;Parent=Msa0467400-mRNA-1 |
| chr3_3 | exon | 68681292 | 68681391 | 68681292 | ID=Msa0467400-mRNA-1:exon:15992;Parent=Msa0467400-mRNA-1 |
| chr3_3 | exon | 68681878 | 68681941 | 68681878 | ID=Msa0467400-mRNA-1:exon:15991;Parent=Msa0467400-mRNA-1 |
| chr3_3 | exon | 68682112 | 68682184 | 68682112 | ID=Msa0467400-mRNA-1:exon:15990;Parent=Msa0467400-mRNA-1 |
| chr3_3 | exon | 68682266 | 68682411 | 68682266 | ID=Msa0467400-mRNA-1:exon:15989;Parent=Msa0467400-mRNA-1 |
| chr3_3 | exon | 68682949 | 68683135 | 68682949 | ID=Msa0467400-mRNA-1:exon:15988;Parent=Msa0467400-mRNA-1 |
| chr3_3 | exon | 68683491 | 68683650 | 68683491 | ID=Msa0467400-mRNA-1:exon:15987;Parent=Msa0467400-mRNA-1 |
| chr3_3 | exon | 68683817 | 68684223 | 68683817 | ID=Msa0467400-mRNA-1:exon:15986;Parent=Msa0467400-mRNA-1 |
| chr3_3 | exon | 68684459 | 68684509 | 68684459 | ID=Msa0467400-mRNA-1:exon:15985;Parent=Msa0467400-mRNA-1 |
| chr3_3 | exon | 68684557 | 68684769 | 68684557 | ID=Msa0467400-mRNA-1:exon:15984;Parent=Msa0467400-mRNA-1 |
| chr3_3 | five_prime_UTR | 68684557 | 68684769 | 68684557 | ID=Msa0467400-mRNA-1:five_prime_utr;Parent=Msa0467400-mRNA-1 |
| chr3_3 | five_prime_UTR | 68684459 | 68684509 | 68684459 | ID=Msa0467400-mRNA-1:five_prime_utr;Parent=Msa0467400-mRNA-1 |
| chr3_3 | five_prime_UTR | 68684158 | 68684223 | 68684158 | ID=Msa0467400-mRNA-1:five_prime_utr;Parent=Msa0467400-mRNA-1 |
| chr3_3 | CDS | 68683817 | 68684157 | 68683817 | ID=Msa0467400-mRNA-1:cds;Parent=Msa0467400-mRNA-1 |
| chr3_3 | CDS | 68683491 | 68683650 | 68683491 | ID=Msa0467400-mRNA-1:cds;Parent=Msa0467400-mRNA-1 |
| chr3_3 | CDS | 68682949 | 68683135 | 68682949 | ID=Msa0467400-mRNA-1:cds;Parent=Msa0467400-mRNA-1 |
| chr3_3 | CDS | 68682266 | 68682411 | 68682266 | ID=Msa0467400-mRNA-1:cds;Parent=Msa0467400-mRNA-1 |
| chr3_3 | CDS | 68682112 | 68682184 | 68682112 | ID=Msa0467400-mRNA-1:cds;Parent=Msa0467400-mRNA-1 |
| chr3_3 | CDS | 68681878 | 68681941 | 68681878 | ID=Msa0467400-mRNA-1:cds;Parent=Msa0467400-mRNA-1 |
| chr3_3 | CDS | 68681292 | 68681391 | 68681292 | ID=Msa0467400-mRNA-1:cds;Parent=Msa0467400-mRNA-1 |
| chr3_3 | CDS | 68679816 | 68679974 | 68679816 | ID=Msa0467400-mRNA-1:cds;Parent=Msa0467400-mRNA-1 |
| chr3_3 | CDS | 68679233 | 68679403 | 68679233 | ID=Msa0467400-mRNA-1:cds;Parent=Msa0467400-mRNA-1 |
| chr3_3 | three_prime_UTR | 68678916 | 68679232 | 68678916 | ID=Msa0467400-mRNA-1:three_prime_utr;Parent=Msa0467400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
