Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470660 | XP_013461321.1 | 97.333 | 600 | 16 | 0 | 1 | 600 | 1 | 600 | 0.0 | 1209 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470660 | sp|Q5W915|USP_PEA | 93.000 | 600 | 42 | 0 | 1 | 600 | 1 | 600 | 0.0 | 1172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470660 | A0A072V120 | 97.333 | 600 | 16 | 0 | 1 | 600 | 1 | 600 | 0.0 | 1209 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0470660 | Msa1270960 | 0.803612 | 3.208679e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470660 | MtrunA17_Chr3g0125301 | 97.333 | 600 | 16 | 0 | 1 | 600 | 1 | 600 | 0.0 | 1209 |
| Msa0470660 | MtrunA17_Chr4g0052421 | 27.005 | 374 | 242 | 11 | 117 | 483 | 115 | 464 | 5.53e-19 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470660 | AT5G52560.1 | 77.295 | 599 | 133 | 1 | 4 | 599 | 15 | 613 | 0.0 | 984 |
| Msa0470660 | AT2G35020.1 | 30.415 | 217 | 136 | 6 | 121 | 329 | 128 | 337 | 1.14e-15 | 80.5 |
Find 184 sgRNAs with CRISPR-Local
Find 533 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTAATGTGAGCTATAAAT+TGG | 0.171891 | 3_3:+72801056 | Msa0470660:three_prime_UTR |
| TCAAGCGTGCCAATATAAAA+AGG | 0.237962 | 3_3:-72801283 | None:intergenic |
| ATTGAAAATCTTTCCGTAGA+TGG | 0.243706 | 3_3:+72800219 | Msa0470660:CDS |
| CATTATTATTACTACTAAAA+AGG | 0.247863 | 3_3:-72801090 | None:intergenic |
| ATTACTTGGTTTATATTTCC+TGG | 0.268636 | 3_3:-72797758 | None:intergenic |
| TGGTTTATATTTCCTGGAAA+TGG | 0.276077 | 3_3:-72797752 | None:intergenic |
| GAGAAAGTCAGACCCCATTT+TGG | 0.281704 | 3_3:-72800117 | None:intergenic |
| TGCTTCTTGAAGTGCCAATA+TGG | 0.292709 | 3_3:-72795259 | None:intergenic |
| GTTCTTGTTGCTGGCGGTCT+TGG | 0.297075 | 3_3:+72794294 | Msa0470660:CDS |
| CTATGGTATGGATTTCCTTT+TGG | 0.304909 | 3_3:-72799356 | None:intergenic |
| GTATCACATGGAAGCCAAAA+TGG | 0.310217 | 3_3:+72800103 | Msa0470660:CDS |
| AAAAGGGTTATTTCCAGCTT+TGG | 0.318368 | 3_3:-72793848 | None:intergenic |
| ACAGAAGTCCATTTGTATCT+TGG | 0.320320 | 3_3:-72796885 | None:intergenic |
| GGTTTATATTTCCTGGAAAT+GGG | 0.326529 | 3_3:-72797751 | None:intergenic |
| GGTATAATGCTGGGTTGAAA+TGG | 0.351056 | 3_3:+72796851 | Msa0470660:intron |
| TGTGAGCTATAAATTGGGTT+TGG | 0.351495 | 3_3:+72801062 | Msa0470660:three_prime_UTR |
| ACATTATATTGAATCCATAT+TGG | 0.357065 | 3_3:+72795245 | Msa0470660:CDS |
| ATTTGATTCTAATAGCTCTA+AGG | 0.361193 | 3_3:-72795952 | None:intergenic |
| TTCCAGCTACCCTGGTGGTT+TGG | 0.367958 | 3_3:+72793786 | Msa0470660:CDS |
| GACGAATCTTTGTAGTCAAT+TGG | 0.370819 | 3_3:-72800874 | None:intergenic |
| CCATTGAAAATCTGCAATAC+TGG | 0.371057 | 3_3:-72800057 | None:intergenic |
| ACCGGCTACTCCCCATTTCC+AGG | 0.371829 | 3_3:+72797740 | Msa0470660:CDS |
| TCTAGGATACAATGGGATTA+AGG | 0.374807 | 3_3:+72794323 | Msa0470660:CDS |
| TCGCTGTTGACATCACCGTC+TGG | 0.380082 | 3_3:-72797716 | None:intergenic |
| CATACACACACTTAAACTTA+AGG | 0.380310 | 3_3:+72801316 | Msa0470660:three_prime_UTR |
| ATCTGCCAGGGTTGGCTTCA+CGG | 0.380632 | 3_3:+72798589 | Msa0470660:CDS |
| GTGAGCTATAAATTGGGTTT+GGG | 0.381347 | 3_3:+72801063 | Msa0470660:three_prime_UTR |
| TAAATTTAACAAAGTTGAAC+AGG | 0.385395 | 3_3:+72800927 | Msa0470660:CDS |
| TTGAAAATCTTTCCGTAGAT+GGG | 0.392265 | 3_3:+72800220 | Msa0470660:CDS |
| TTAGAATCAAATTCTTACTT+TGG | 0.395630 | 3_3:+72795963 | Msa0470660:CDS |
| CCAGCGGTATTCTGAAAGTA+TGG | 0.397023 | 3_3:+72796335 | Msa0470660:CDS |
| TTATGCATTTATAGTCTTCA+AGG | 0.400198 | 3_3:+72801243 | Msa0470660:three_prime_UTR |
| AAGCCATGGTGGAATGGAAT+TGG | 0.400995 | 3_3:-72793432 | None:intergenic |
| TTTGTGAGCTCTTCGATGTA+AGG | 0.404433 | 3_3:-72798107 | None:intergenic |
| GAAGAAAGCCTTCTTCGATC+AGG | 0.408995 | 3_3:+72793660 | Msa0470660:CDS |
| TTCTCGTCGTCGTCGACGCC+GGG | 0.415672 | 3_3:-72793640 | None:intergenic |
| ATGGTCAAGAGGTTGAAGTT+TGG | 0.420728 | 3_3:+72800076 | Msa0470660:CDS |
| TAGTGCTACCTCTGGAGAAA+TGG | 0.420957 | 3_3:+72799376 | Msa0470660:CDS |
| TAAAATGACAGGAAGGTCTA+TGG | 0.421206 | 3_3:+72797640 | Msa0470660:intron |
| TCGTCGTCGACGCCGGGTGC+CGG | 0.422604 | 3_3:-72793634 | None:intergenic |
| TAACATTCTCTCGGCGAAAC+AGG | 0.424941 | 3_3:+72793474 | Msa0470660:CDS |
| GGAATCAGCCAAGAGTCGTT+TGG | 0.429832 | 3_3:-72793827 | None:intergenic |
| TCCACCATGGCTTCCTCCCT+CGG | 0.431016 | 3_3:+72793442 | Msa0470660:exon |
| CTTAAACTTAAGGGTGTGAA+TGG | 0.436755 | 3_3:+72801326 | Msa0470660:three_prime_UTR |
| TAAGTCTACACTCGCGATCA+AGG | 0.439090 | 3_3:+72800182 | Msa0470660:CDS |
| GTTTATTAGCGGTGCCGTGC+CGG | 0.440474 | 3_3:-72793325 | None:intergenic |
| TATCACATGGAAGCCAAAAT+GGG | 0.440662 | 3_3:+72800104 | Msa0470660:CDS |
| GCCTTGAGGTGAAATTTGCC+TGG | 0.441641 | 3_3:-72800970 | None:intergenic |
| CGCTGTTGACATCACCGTCT+GGG | 0.444298 | 3_3:-72797715 | None:intergenic |
| CTTCTCGTCGTCGTCGACGC+CGG | 0.444417 | 3_3:-72793641 | None:intergenic |
| ATACACACACTTAAACTTAA+GGG | 0.446671 | 3_3:+72801317 | Msa0470660:three_prime_UTR |
| TTCCAAACCACCAGGGTAGC+TGG | 0.451156 | 3_3:-72793788 | None:intergenic |
| AAATAGCATTATTCTCAAAC+AGG | 0.452099 | 3_3:+72799412 | Msa0470660:CDS |
| ACCATCTGAGTGGGTGAGCC+TGG | 0.454313 | 3_3:-72797096 | None:intergenic |
| TGGGTTAACAAACTCCTGTA+TGG | 0.454636 | 3_3:-72798141 | None:intergenic |
| CAATAACGCCAAACGACTCT+TGG | 0.455775 | 3_3:+72793819 | Msa0470660:CDS |
| CTCTTGGCTGATTCCAAAGC+TGG | 0.455807 | 3_3:+72793835 | Msa0470660:CDS |
| GCAATACTGGATCTGCTACT+TGG | 0.461068 | 3_3:-72800044 | None:intergenic |
| TGTAATGTGAGCTATAAATT+GGG | 0.461623 | 3_3:+72801057 | Msa0470660:three_prime_UTR |
| GTGCCGGCCAATCGCGGAAG+AGG | 0.464249 | 3_3:-72793618 | None:intergenic |
| CCACCTCTTCCGCGATTGGC+CGG | 0.471846 | 3_3:+72793615 | Msa0470660:CDS |
| TTTAAGAGTGTTACTTGTGT+GGG | 0.473046 | 3_3:-72795993 | None:intergenic |
| TACAAATGGACTTCTGTTCA+AGG | 0.473717 | 3_3:+72796891 | Msa0470660:CDS |
| AATCGCGGAAGAGGTGGTCT+TGG | 0.474606 | 3_3:-72793609 | None:intergenic |
| TCAAATCAAATGTTTATTAG+CGG | 0.475024 | 3_3:-72793336 | None:intergenic |
| GTATAATGCTGGGTTGAAAT+GGG | 0.476856 | 3_3:+72796852 | Msa0470660:CDS |
| TCCTGGAAATGGGGAGTAGC+CGG | 0.478357 | 3_3:-72797741 | None:intergenic |
| CGGAAAGCAAAAGAAGCTAT+TGG | 0.481673 | 3_3:+72797065 | Msa0470660:CDS |
| AAGACCACCTCTTCCGCGAT+TGG | 0.482731 | 3_3:+72793611 | Msa0470660:CDS |
| ATACTTGTTAGGTATAATGC+TGG | 0.486195 | 3_3:+72796841 | Msa0470660:intron |
| GCAGGCAATTCCATCAGCAC+TGG | 0.486842 | 3_3:+72796995 | Msa0470660:intron |
| TGAAGCCAACCCTGGCAGAT+GGG | 0.489077 | 3_3:-72798586 | None:intergenic |
| CTACTTGATTCCAGCTACCC+TGG | 0.491817 | 3_3:+72793778 | Msa0470660:CDS |
| TCAGAGGTCATAATAACAAA+AGG | 0.492536 | 3_3:-72795912 | None:intergenic |
| GAAGGGGTGAAGCCATCAAA+AGG | 0.498396 | 3_3:-72793865 | None:intergenic |
| CTTTAAGAGTGTTACTTGTG+TGG | 0.504118 | 3_3:-72795994 | None:intergenic |
| CGCCGGGTGCCGGCCAATCG+CGG | 0.508300 | 3_3:-72793624 | None:intergenic |
| TTCATCAAATTCGAGGAAGC+AGG | 0.509202 | 3_3:+72794243 | Msa0470660:CDS |
| CCATACCATAGTGCTACCTC+TGG | 0.509828 | 3_3:+72799368 | Msa0470660:CDS |
| TTCCGCGATTGGCCGGCACC+CGG | 0.510394 | 3_3:+72793622 | Msa0470660:CDS |
| GAAGCCAACCCTGGCAGATG+GGG | 0.514138 | 3_3:-72798585 | None:intergenic |
| TAATGATGCCAGGCTTGCAT+TGG | 0.515649 | 3_3:+72796119 | Msa0470660:CDS |
| GAGTGTAGACTTATGAGAAA+TGG | 0.516156 | 3_3:-72800172 | None:intergenic |
| GGTGATGTCAACAGCGAGAC+CGG | 0.516387 | 3_3:+72797722 | Msa0470660:CDS |
| CTTCAAGAAGCAAGCTCAGA+AGG | 0.516477 | 3_3:+72795270 | Msa0470660:CDS |
| TTTCTCCAGAGGTAGCACTA+TGG | 0.517129 | 3_3:-72799373 | None:intergenic |
| GTGAAGCCAACCCTGGCAGA+TGG | 0.519479 | 3_3:-72798587 | None:intergenic |
| AGATTAGCTCCACCTTGACT+AGG | 0.520643 | 3_3:+72801213 | Msa0470660:three_prime_UTR |
| ACTGGTGAGACATTGACATT+TGG | 0.520973 | 3_3:+72794210 | Msa0470660:CDS |
| CAGTACCTTAGCAGCATCCT+CGG | 0.524669 | 3_3:-72798830 | None:intergenic |
| GATTAGCTCCACCTTGACTA+GGG | 0.525856 | 3_3:+72801214 | Msa0470660:three_prime_UTR |
| TCGATTCATTCAGCAAGAGT+TGG | 0.533239 | 3_3:+72793564 | Msa0470660:intron |
| TAATGCCGAGGATGCTGCTA+AGG | 0.534038 | 3_3:+72798825 | Msa0470660:CDS |
| TGAATTATATAGGTAAAGGT+AGG | 0.534656 | 3_3:+72800817 | Msa0470660:intron |
| GAAGAGAAATATTCTAAGCC+AGG | 0.537065 | 3_3:+72800952 | Msa0470660:CDS |
| CCTCTGATTCTCAATACCTC+AGG | 0.537066 | 3_3:-72800901 | None:intergenic |
| GCCAGGCAAATTTCACCTCA+AGG | 0.541476 | 3_3:+72800969 | Msa0470660:CDS |
| GAACTGACACCCAGTGCTGA+TGG | 0.541697 | 3_3:-72797005 | None:intergenic |
| TTTGGGTAGACGAAACCTCA+TGG | 0.542934 | 3_3:+72796283 | Msa0470660:intron |
| CCAGAGGTAGCACTATGGTA+TGG | 0.543808 | 3_3:-72799368 | None:intergenic |
| GTGAGCGTCTAGGATACAAT+GGG | 0.545702 | 3_3:+72794316 | Msa0470660:CDS |
| GTCGCCGAGGGAGGAAGCCA+TGG | 0.547172 | 3_3:-72793446 | None:intergenic |
| TGACAACTTCATCAAATTCG+AGG | 0.547838 | 3_3:+72794236 | Msa0470660:CDS |
| GTTTATATTTCCTGGAAATG+GGG | 0.548559 | 3_3:-72797750 | None:intergenic |
| CCATACTTTCAGAATACCGC+TGG | 0.550780 | 3_3:-72796335 | None:intergenic |
| GGGAGGAAGCCATGGTGGAA+TGG | 0.552665 | 3_3:-72793438 | None:intergenic |
| ATGACCTCTGATGACACTCA+TGG | 0.553161 | 3_3:+72795924 | Msa0470660:CDS |
| AATGGAAACCTGATCGAAGA+AGG | 0.553363 | 3_3:-72793668 | None:intergenic |
| CCTGAGGTATTGAGAATCAG+AGG | 0.554089 | 3_3:+72800901 | Msa0470660:CDS |
| CCGGCCAATCGCGGAAGAGG+TGG | 0.554666 | 3_3:-72793615 | None:intergenic |
| TCTTCCGGCGGAAACAACTA+CGG | 0.555721 | 3_3:+72795206 | Msa0470660:CDS |
| AGAATTAACATGGTACTGCT+TGG | 0.556988 | 3_3:-72797030 | None:intergenic |
| AAGTTTGGCCCCGTATCACA+TGG | 0.557471 | 3_3:+72800091 | Msa0470660:CDS |
| AAGCTATTGGTGGAATTACC+AGG | 0.562567 | 3_3:+72797078 | Msa0470660:CDS |
| GATCCTCTTCTGAGAGCAAG+TGG | 0.563352 | 3_3:+72797689 | Msa0470660:CDS |
| GGCGGTCTTGGTGAGCGTCT+AGG | 0.565338 | 3_3:+72794306 | Msa0470660:CDS |
| AATGTCAATGTCTCACCAGT+TGG | 0.565975 | 3_3:-72794207 | None:intergenic |
| GAATACCTCTGCATCGTCGA+CGG | 0.566116 | 3_3:-72800259 | None:intergenic |
| TATGATAAGAGCCCCATCTA+CGG | 0.569609 | 3_3:-72800232 | None:intergenic |
| ATTTACCGTGAAGCCAACCC+TGG | 0.570682 | 3_3:-72798594 | None:intergenic |
| AGGTGGTTCAGTTCAGAACA+AGG | 0.571031 | 3_3:+72800837 | Msa0470660:CDS |
| TTAATTCTCTTGCAGTACCT+CGG | 0.571184 | 3_3:+72797045 | Msa0470660:CDS |
| GCTTAGACGATAATGATGCC+AGG | 0.574530 | 3_3:+72796109 | Msa0470660:CDS |
| GTTAAAATTGTCGCCGAGGG+AGG | 0.575916 | 3_3:-72793455 | None:intergenic |
| ATTAGCGGTGCCGTGCCGGT+CGG | 0.577336 | 3_3:-72793321 | None:intergenic |
| ACAAGTAACACTCTTAAAGC+AGG | 0.578003 | 3_3:+72795998 | Msa0470660:CDS |
| AAGTCTACACTCGCGATCAA+GGG | 0.582452 | 3_3:+72800183 | Msa0470660:CDS |
| ACAATGGCACCCTCCCACCT+AGG | 0.585440 | 3_3:+72801152 | Msa0470660:three_prime_UTR |
| CAGGCAATTCCATCAGCACT+GGG | 0.589359 | 3_3:+72796996 | Msa0470660:intron |
| GGTGAGCGTCTAGGATACAA+TGG | 0.590799 | 3_3:+72794315 | Msa0470660:CDS |
| CTTCCGGCGGAAACAACTAC+GGG | 0.591578 | 3_3:+72795207 | Msa0470660:CDS |
| GTTCAGTTCAGAACAAGGGT+TGG | 0.591734 | 3_3:+72800842 | Msa0470660:CDS |
| TATCCACTTGCTCTCAGAAG+AGG | 0.592526 | 3_3:-72797692 | None:intergenic |
| ATAATTGTGACTTACGGAAG+GGG | 0.593230 | 3_3:-72793881 | None:intergenic |
| AAAGCAAAAGAAGCTATTGG+TGG | 0.593598 | 3_3:+72797068 | Msa0470660:CDS |
| TTGGGTAGACGAAACCTCAT+GGG | 0.593857 | 3_3:+72796284 | Msa0470660:intron |
| ATTTAACAAAGTTGAACAGG+TGG | 0.595001 | 3_3:+72800930 | Msa0470660:CDS |
| AGAATAGATAATGAAGCACA+AGG | 0.598639 | 3_3:-72801025 | None:intergenic |
| AAGCCAACCCTGGCAGATGG+GGG | 0.600067 | 3_3:-72798584 | None:intergenic |
| ACCAGGCTCACCCACTCAGA+TGG | 0.602273 | 3_3:+72797095 | Msa0470660:CDS |
| ATATAAGCTTCCAAACCACC+AGG | 0.603731 | 3_3:-72793796 | None:intergenic |
| AGATGCCGTCGACGATGCAG+AGG | 0.604195 | 3_3:+72800254 | Msa0470660:CDS |
| TAGACGAAACCTCATGGGCA+TGG | 0.605123 | 3_3:+72796289 | Msa0470660:intron |
| AAGGTCTATGGTGATAAATG+TGG | 0.606441 | 3_3:+72797652 | Msa0470660:CDS |
| CAAAGATTCGTCAGAGCCTG+AGG | 0.611817 | 3_3:+72800885 | Msa0470660:CDS |
| CTTGATTCCAGCTACCCTGG+TGG | 0.614985 | 3_3:+72793781 | Msa0470660:CDS |
| AATCAACTTACCATCTGAGT+GGG | 0.616277 | 3_3:-72797105 | None:intergenic |
| AAATGCATCTTCAAGCCTTG+AGG | 0.616905 | 3_3:-72800984 | None:intergenic |
| TCAATCAAGAGCAAAGTCAG+TGG | 0.617100 | 3_3:+72800141 | Msa0470660:CDS |
| TGAAAATCTTTCCGTAGATG+GGG | 0.617657 | 3_3:+72800221 | Msa0470660:CDS |
| ACACAGAAACCTAGGTGGGA+GGG | 0.617748 | 3_3:-72801161 | None:intergenic |
| TGACCTCTGATGACACTCAT+GGG | 0.617760 | 3_3:+72795925 | Msa0470660:CDS |
| GTTACTCCACACAGAAACCT+AGG | 0.618922 | 3_3:-72801169 | None:intergenic |
| CATTCACTTCTTCATTCCAG+CGG | 0.619353 | 3_3:+72796319 | Msa0470660:CDS |
| CACACAGAAACCTAGGTGGG+AGG | 0.621419 | 3_3:-72801162 | None:intergenic |
| CTCCCACCTAGGTTTCTGTG+TGG | 0.622687 | 3_3:+72801163 | Msa0470660:three_prime_UTR |
| TTTGGCTTCCATGTGATACG+GGG | 0.623678 | 3_3:-72800099 | None:intergenic |
| GCCGAGGGAGGAAGCCATGG+TGG | 0.626986 | 3_3:-72793443 | None:intergenic |
| ATTATATAGGTAAAGGTAGG+TGG | 0.627156 | 3_3:+72800820 | Msa0470660:intron |
| GAATGTTAAAATTGTCGCCG+AGG | 0.632126 | 3_3:-72793459 | None:intergenic |
| TACTTGTTAGGTATAATGCT+GGG | 0.632271 | 3_3:+72796842 | Msa0470660:intron |
| AGATCGACATAGTTACCGAC+CGG | 0.632932 | 3_3:+72793306 | Msa0470660:five_prime_UTR |
| GACAAGACAACAACGTAGGT+AGG | 0.635369 | 3_3:-72793365 | None:intergenic |
| AAGGGGTGAAGCCATCAAAA+GGG | 0.636406 | 3_3:-72793864 | None:intergenic |
| TTGTGCAGGTGATGGAAACA+TGG | 0.636608 | 3_3:+72798779 | Msa0470660:intron |
| TGCACATCGCCATGCCCATG+AGG | 0.642511 | 3_3:-72796298 | None:intergenic |
| AATGTTAAAATTGTCGCCGA+GGG | 0.644645 | 3_3:-72793458 | None:intergenic |
| ATTCCAATTCCATTCCACCA+TGG | 0.644804 | 3_3:+72793429 | Msa0470660:exon |
| GAATAGATAATGAAGCACAA+GGG | 0.646250 | 3_3:-72801024 | None:intergenic |
| ATTAGCTCCACCTTGACTAG+GGG | 0.648892 | 3_3:+72801215 | Msa0470660:three_prime_UTR |
| GTTCCCGTAGTTGTTTCCGC+CGG | 0.649051 | 3_3:-72795210 | None:intergenic |
| TTAGCTCCACCTTGACTAGG+GGG | 0.650560 | 3_3:+72801216 | Msa0470660:three_prime_UTR |
| CAATCAACTTACCATCTGAG+TGG | 0.658635 | 3_3:-72797106 | None:intergenic |
| ATATATAGCCATTTCTCCAG+AGG | 0.663221 | 3_3:-72799384 | None:intergenic |
| GACATAGTTACCGACCGGCA+CGG | 0.663445 | 3_3:+72793311 | Msa0470660:five_prime_UTR |
| CTCCACACAGAAACCTAGGT+GGG | 0.665412 | 3_3:-72801165 | None:intergenic |
| GGTGGTTCAGTTCAGAACAA+GGG | 0.670189 | 3_3:+72800838 | Msa0470660:CDS |
| ATCACATGGAAGCCAAAATG+GGG | 0.670736 | 3_3:+72800105 | Msa0470660:CDS |
| ACGCCCATGAGTGTCATCAG+AGG | 0.678463 | 3_3:-72795928 | None:intergenic |
| AAAAGACAAGACAACAACGT+AGG | 0.692204 | 3_3:-72793369 | None:intergenic |
| AGAGCAAGTGGATACCCAGA+CGG | 0.693936 | 3_3:+72797701 | Msa0470660:CDS |
| ACTCCACACAGAAACCTAGG+TGG | 0.727985 | 3_3:-72801166 | None:intergenic |
| GTACTGCAAGAGAATTAACA+TGG | 0.729330 | 3_3:-72797040 | None:intergenic |
| TATAAGCTTCCAAACCACCA+GGG | 0.733754 | 3_3:-72793795 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTGAAAAATTTATTTAT+CGG | - | chr3_3:72794815-72794834 | None:intergenic | 10.0% |
| !!! | TTGAAATTTTTATTGTATAA+AGG | + | chr3_3:72799008-72799027 | Msa0470660:intron | 10.0% |
| !! | AAAGTAATTAAAAATAAGAA+TGG | - | chr3_3:72800670-72800689 | None:intergenic | 10.0% |
| !!! | TTTTTCTTTATGAATTATAT+AGG | + | chr3_3:72800807-72800826 | Msa0470660:intron | 10.0% |
| !!! | TTTTTCTATGCTATTATTTT+TGG | + | chr3_3:72795451-72795470 | Msa0470660:intron | 15.0% |
| !! | TAATTACCTATAATATTTCA+AGG | + | chr3_3:72795833-72795852 | Msa0470660:intron | 15.0% |
| !! | AAAATACCTTGAAATATTAT+AGG | - | chr3_3:72795842-72795861 | None:intergenic | 15.0% |
| !!! | TCATACTTCATTTAATTTAA+TGG | - | chr3_3:72796616-72796635 | None:intergenic | 15.0% |
| !!! | ATATTTTAAGTATTAATTCG+TGG | + | chr3_3:72796970-72796989 | Msa0470660:intron | 15.0% |
| !!! | AATACTTTTTATCAAAGAAA+AGG | - | chr3_3:72797444-72797463 | None:intergenic | 15.0% |
| !!! | TTTCTTTGATAAAAAGTATT+TGG | + | chr3_3:72797444-72797463 | Msa0470660:intron | 15.0% |
| !! | ATATTATTACTTCATCAATT+TGG | + | chr3_3:72798196-72798215 | Msa0470660:intron | 15.0% |
| !! | AAGAAAAAAAAAAAACTAAG+CGG | - | chr3_3:72799056-72799075 | None:intergenic | 15.0% |
| !! | TGTTACATATAAAATTATCA+GGG | + | chr3_3:72799760-72799779 | Msa0470660:intron | 15.0% |
| !! | TAAGACTTTCTATATAAATT+TGG | - | chr3_3:72800582-72800601 | None:intergenic | 15.0% |
| !! | TTTATGAATTATATAGGTAA+AGG | + | chr3_3:72800813-72800832 | Msa0470660:intron | 15.0% |
| !! | CATTATTATTACTACTAAAA+AGG | - | chr3_3:72801093-72801112 | None:intergenic | 15.0% |
| !! | TCAAATCAAATGTTTATTAG+CGG | - | chr3_3:72793339-72793358 | None:intergenic | 20.0% |
| !! | CAAAAATCAGAAATGTTTAT+TGG | - | chr3_3:72793540-72793559 | None:intergenic | 20.0% |
| !! | AAAGTAATAATTGTGACTTA+CGG | - | chr3_3:72793890-72793909 | None:intergenic | 20.0% |
| !! | TAGAGCAAAAAAAATGATAA+AGG | - | chr3_3:72794356-72794375 | None:intergenic | 20.0% |
| !!! | TATAGCTACATTGTAAATTT+TGG | - | chr3_3:72794526-72794545 | None:intergenic | 20.0% |
| !!! | TTAGCTTAAACTAAATTTTG+AGG | + | chr3_3:72794553-72794572 | Msa0470660:intron | 20.0% |
| !!! | TAGCTTAAACTAAATTTTGA+GGG | + | chr3_3:72794554-72794573 | Msa0470660:intron | 20.0% |
| !! | TTGAAAAATTTATTTATCGG+AGG | - | chr3_3:72794812-72794831 | None:intergenic | 20.0% |
| !! | GAAAAAATGATTAATTGTGT+TGG | + | chr3_3:72794952-72794971 | Msa0470660:intron | 20.0% |
| !!! | ATTGATAATTAACGTTTCAT+TGG | + | chr3_3:72795069-72795088 | Msa0470660:intron | 20.0% |
| !! | ACATTATATTGAATCCATAT+TGG | + | chr3_3:72795245-72795264 | Msa0470660:CDS | 20.0% |
| !!! | TTTTATGAGAGGAAAAAAAA+AGG | - | chr3_3:72795693-72795712 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCCTCTCATAAAA+TGG | + | chr3_3:72795693-72795712 | Msa0470660:intron | 20.0% |
| !!! | CTATTGTGGAAAATATTTTT+GGG | - | chr3_3:72795722-72795741 | None:intergenic | 20.0% |
| !!! | TCTATTGTGGAAAATATTTT+TGG | - | chr3_3:72795723-72795742 | None:intergenic | 20.0% |
| !!! | TAATATTTCAAGGTATTTTC+TGG | + | chr3_3:72795843-72795862 | Msa0470660:intron | 20.0% |
| !! | TTAGAATCAAATTCTTACTT+TGG | + | chr3_3:72795963-72795982 | Msa0470660:CDS | 20.0% |
| !!! | TGATTGCGTTATTTTAAAAA+AGG | + | chr3_3:72796187-72796206 | Msa0470660:intron | 20.0% |
| !!! | AATCCAACATTTTATGTTAA+TGG | - | chr3_3:72796231-72796250 | None:intergenic | 20.0% |
| !! | AGAACATTCTTAAATTACTT+AGG | - | chr3_3:72796463-72796482 | None:intergenic | 20.0% |
| !!! | AAGAATGTTCTGAATATATT+TGG | + | chr3_3:72796472-72796491 | Msa0470660:intron | 20.0% |
| !!! | AGAATGTTCTGAATATATTT+GGG | + | chr3_3:72796473-72796492 | Msa0470660:intron | 20.0% |
| !! | TAATACTTAAAATATACCGA+CGG | - | chr3_3:72796965-72796984 | None:intergenic | 20.0% |
| !!! | TCTATTTTCTTATTTTCTTC+AGG | + | chr3_3:72797374-72797393 | Msa0470660:intron | 20.0% |
| !!! | ATGTCAAATGAGATTTTTTA+TGG | + | chr3_3:72797582-72797601 | Msa0470660:intron | 20.0% |
| !! | AAGTATGAAAAATGATTACT+TGG | - | chr3_3:72797775-72797794 | None:intergenic | 20.0% |
| !! | AATTAAAAAGATGAATTCCA+CGG | - | chr3_3:72797826-72797845 | None:intergenic | 20.0% |
| !!! | CTTTTTAATTATCTATTGTG+TGG | + | chr3_3:72797836-72797855 | Msa0470660:intron | 20.0% |
| !! | TTAGAAAGAAGAATTACTTT+GGG | - | chr3_3:72798163-72798182 | None:intergenic | 20.0% |
| !! | ATTAGAAAGAAGAATTACTT+TGG | - | chr3_3:72798164-72798183 | None:intergenic | 20.0% |
| !!! | AAGTTTTCATGAAAAAATTG+AGG | + | chr3_3:72798395-72798414 | Msa0470660:intron | 20.0% |
| !! | AGATTATCTTGAGTTATAAA+TGG | + | chr3_3:72798680-72798699 | Msa0470660:intron | 20.0% |
| !! | AAAAGAAAGAAAAGAAATAG+TGG | + | chr3_3:72798890-72798909 | Msa0470660:intron | 20.0% |
| !!! | AATTTTTATTGTATAAAGGC+TGG | + | chr3_3:72799012-72799031 | Msa0470660:intron | 20.0% |
| !!! | ATTTTTATTGTATAAAGGCT+GGG | + | chr3_3:72799013-72799032 | Msa0470660:intron | 20.0% |
| !! | AGAAAAAAAAAAAACTAAGC+GGG | - | chr3_3:72799055-72799074 | None:intergenic | 20.0% |
| !! | TTTACAAAACGTTGAATATT+GGG | - | chr3_3:72799126-72799145 | None:intergenic | 20.0% |
| !!! | TTTTACAAAACGTTGAATAT+TGG | - | chr3_3:72799127-72799146 | None:intergenic | 20.0% |
| !!! | ACGTTTTGTAAAAGAAATAT+TGG | + | chr3_3:72799134-72799153 | Msa0470660:intron | 20.0% |
| !!! | AAGTACATTTTTGTAACTAA+AGG | + | chr3_3:72799224-72799243 | Msa0470660:intron | 20.0% |
| !! | TAAGAAATGAAACCATATAA+TGG | + | chr3_3:72799253-72799272 | Msa0470660:intron | 20.0% |
| !!! | TTGTTTTTGTTTCCATTATA+TGG | - | chr3_3:72799268-72799287 | None:intergenic | 20.0% |
| !!! | AAAACCTTTTAGAAAGTTAA+GGG | - | chr3_3:72799296-72799315 | None:intergenic | 20.0% |
| !! | TTTCACAAAACTAATTCAAA+GGG | - | chr3_3:72799525-72799544 | None:intergenic | 20.0% |
| !!! | TTTTCACAAAACTAATTCAA+AGG | - | chr3_3:72799526-72799545 | None:intergenic | 20.0% |
| !!! | CTGATAATTTTATATGTAAC+AGG | - | chr3_3:72799761-72799780 | None:intergenic | 20.0% |
| !! | CTGTTACATATAAAATTATC+AGG | + | chr3_3:72799759-72799778 | Msa0470660:intron | 20.0% |
| !! | TAAATACCGATAAATTGTAT+TGG | - | chr3_3:72800284-72800303 | None:intergenic | 20.0% |
| !! | TAAAAGATTCAATCAAACAA+AGG | - | chr3_3:72800776-72800795 | None:intergenic | 20.0% |
| !! | TAAATTTAACAAAGTTGAAC+AGG | + | chr3_3:72800927-72800946 | Msa0470660:CDS | 20.0% |
| ! | ATGTTTATTGGAATGTGAAA+AGG | - | chr3_3:72793528-72793547 | None:intergenic | 25.0% |
| ! | GTGAAGATACTATTGAAAAA+TGG | + | chr3_3:72793586-72793605 | Msa0470660:CDS | 25.0% |
| ! | TAAGATTAATTTCTATGCAC+AGG | + | chr3_3:72794015-72794034 | Msa0470660:intron | 25.0% |
| !!! | ATTTTTTGTTTGTGCATGTT+CGG | + | chr3_3:72794138-72794157 | Msa0470660:intron | 25.0% |
| !! | GAGCTTATCAACTTAAATTT+TGG | + | chr3_3:72794487-72794506 | Msa0470660:intron | 25.0% |
| ! | ACCAAAAATATTCCTAATGT+AGG | - | chr3_3:72794597-72794616 | None:intergenic | 25.0% |
| !!! | TACATTAGGAATATTTTTGG+TGG | + | chr3_3:72794596-72794615 | Msa0470660:intron | 25.0% |
| ! | ATTAAATGAAGGTTATGATG+AGG | + | chr3_3:72794625-72794644 | Msa0470660:intron | 25.0% |
| ! | AATGTAATAACAATGTGTCT+GGG | - | chr3_3:72794660-72794679 | None:intergenic | 25.0% |
| ! | TAATGTAATAACAATGTGTC+TGG | - | chr3_3:72794661-72794680 | None:intergenic | 25.0% |
| !! | CACATTGTTATTACATTATG+TGG | + | chr3_3:72794663-72794682 | Msa0470660:intron | 25.0% |
| ! | ATGGTTAAATATGACTCTAT+TGG | - | chr3_3:72795314-72795333 | None:intergenic | 25.0% |
| ! | AAATTGGGTACAATATAGAA+AGG | - | chr3_3:72795393-72795412 | None:intergenic | 25.0% |
| !! | TTATTTTCTGTCAGAATGAA+TGG | - | chr3_3:72795430-72795449 | None:intergenic | 25.0% |
| ! | TTTGGAAAATGACTTGATAT+TGG | + | chr3_3:72795469-72795488 | Msa0470660:intron | 25.0% |
| !! | ATTTGATTCTAATAGCTCTA+AGG | - | chr3_3:72795955-72795974 | None:intergenic | 25.0% |
| ! | ATTAATTCTGAACATGATTC+AGG | + | chr3_3:72796074-72796093 | Msa0470660:intron | 25.0% |
| !!! | TGAATTCTGTATCTGTTTTT+TGG | - | chr3_3:72796147-72796166 | None:intergenic | 25.0% |
| ! | AAAAAACAGATACAGAATTC+AGG | + | chr3_3:72796146-72796165 | Msa0470660:CDS | 25.0% |
| !!! | TTGCGTTATTTTAAAAAAGG+CGG | + | chr3_3:72796190-72796209 | Msa0470660:intron | 25.0% |
| ! | CTTCCATTAACATAAAATGT+TGG | + | chr3_3:72796225-72796244 | Msa0470660:intron | 25.0% |
| ! | GAAATTGAAGACATATAAGT+AGG | - | chr3_3:72796392-72796411 | None:intergenic | 25.0% |
| !!! | CATTTGCTGTATTTATTTCT+TGG | - | chr3_3:72796768-72796787 | None:intergenic | 25.0% |
| ! | CAAGAAATAAATACAGCAAA+TGG | + | chr3_3:72796766-72796785 | Msa0470660:intron | 25.0% |
| ! | AATACTTAAAATATACCGAC+GGG | - | chr3_3:72796964-72796983 | None:intergenic | 25.0% |
| ! | ATAAGCACAATCAAATGTTA+TGG | - | chr3_3:72797491-72797510 | None:intergenic | 25.0% |
| ! | ATTACTTGGTTTATATTTCC+TGG | - | chr3_3:72797761-72797780 | None:intergenic | 25.0% |
| ! | TGCATTATTATCATGTCATA+TGG | + | chr3_3:72797881-72797900 | Msa0470660:intron | 25.0% |
| ! | AGATCATTATGCATTATGTT+TGG | + | chr3_3:72797923-72797942 | Msa0470660:intron | 25.0% |
| ! | ATTTGAATACTAGACATTTC+AGG | + | chr3_3:72797948-72797967 | Msa0470660:intron | 25.0% |
| ! | ACAATATGAACTATTCCAAT+TGG | + | chr3_3:72798341-72798360 | Msa0470660:intron | 25.0% |
| ! | TTGAATACATACACTTAACT+AGG | - | chr3_3:72798929-72798948 | None:intergenic | 25.0% |
| ! | TGTATTCAATTGATGTAGAT+TGG | + | chr3_3:72798940-72798959 | Msa0470660:intron | 25.0% |
| !!! | GAAAACCTTTTAGAAAGTTA+AGG | - | chr3_3:72799297-72799316 | None:intergenic | 25.0% |
| !!! | TTTCTAAAAGGTTTTCAAGA+TGG | + | chr3_3:72799301-72799320 | Msa0470660:intron | 25.0% |
| !!! | CATGTACTTTTTTTATCTGA+AGG | + | chr3_3:72799331-72799350 | Msa0470660:intron | 25.0% |
| ! | AAATAGCATTATTCTCAAAC+AGG | + | chr3_3:72799412-72799431 | Msa0470660:CDS | 25.0% |
| !! | TTTTTCTTTATTCTGTACGA+TGG | - | chr3_3:72799587-72799606 | None:intergenic | 25.0% |
| !!! | TTTTATCACATTGCTTGTTA+TGG | - | chr3_3:72799622-72799641 | None:intergenic | 25.0% |
| !!! | ACAGTTATAGTTTTAGCAAT+TGG | - | chr3_3:72799980-72799999 | None:intergenic | 25.0% |
| ! | GGTATTCCAATACAATTTAT+CGG | + | chr3_3:72800275-72800294 | Msa0470660:intron | 25.0% |
| ! | AACTAAATATTAGCACCTAT+AGG | - | chr3_3:72800474-72800493 | None:intergenic | 25.0% |
| ! | ATAGGTGCTAATATTTAGTT+TGG | + | chr3_3:72800474-72800493 | Msa0470660:intron | 25.0% |
| ! | GGATGTATTTATTAGAAGTT+AGG | - | chr3_3:72800539-72800558 | None:intergenic | 25.0% |
| ! | TCTATATAAATTTGGATGAC+TGG | - | chr3_3:72800574-72800593 | None:intergenic | 25.0% |
| !!! | TTTACTTTTTGAAGAGATAG+TGG | - | chr3_3:72800714-72800733 | None:intergenic | 25.0% |
| ! | TGAATTATATAGGTAAAGGT+AGG | + | chr3_3:72800817-72800836 | Msa0470660:intron | 25.0% |
| ! | TTGTAATGTGAGCTATAAAT+TGG | + | chr3_3:72801056-72801075 | Msa0470660:three_prime_UTR | 25.0% |
| ! | TGTAATGTGAGCTATAAATT+GGG | + | chr3_3:72801057-72801076 | Msa0470660:three_prime_UTR | 25.0% |
| !!! | TAGTGACATTAAAGTTTTGA+AGG | + | chr3_3:72801120-72801139 | Msa0470660:three_prime_UTR | 25.0% |
| !!! | AGTGACATTAAAGTTTTGAA+GGG | + | chr3_3:72801121-72801140 | Msa0470660:three_prime_UTR | 25.0% |
| ! | TTATGCATTTATAGTCTTCA+AGG | + | chr3_3:72801243-72801262 | Msa0470660:three_prime_UTR | 25.0% |
| !! | ATACGATACCCTTTTTATAT+TGG | + | chr3_3:72801274-72801293 | Msa0470660:three_prime_UTR | 25.0% |
| ! | ATACACACACTTAAACTTAA+GGG | + | chr3_3:72801317-72801336 | Msa0470660:three_prime_UTR | 25.0% |
| !! | CGACAATTTTAACATTCTCT+CGG | + | chr3_3:72793465-72793484 | Msa0470660:CDS | 30.0% |
| CTATCTATCTATCTATGCAA+TGG | - | chr3_3:72793689-72793708 | None:intergenic | 30.0% | |
| AATAATTGTGACTTACGGAA+GGG | - | chr3_3:72793885-72793904 | None:intergenic | 30.0% | |
| TAATAATTGTGACTTACGGA+AGG | - | chr3_3:72793886-72793905 | None:intergenic | 30.0% | |
| CATATAACAGAAATGCACAA+AGG | - | chr3_3:72793952-72793971 | None:intergenic | 30.0% | |
| ATCCAATTCCAATCAAATCA+CGG | - | chr3_3:72794081-72794100 | None:intergenic | 30.0% | |
| ATGCACAAACAAAAAATGCA+AGG | - | chr3_3:72794135-72794154 | None:intergenic | 30.0% | |
| !!! | TTTTTTGTTTGTGCATGTTC+GGG | + | chr3_3:72794139-72794158 | Msa0470660:intron | 30.0% |
| ! | CTGTTTAGTAATGATTTTGC+AGG | + | chr3_3:72794182-72794201 | Msa0470660:intron | 30.0% |
| ATCAACCAACATCCATATTA+TGG | + | chr3_3:72794432-72794451 | Msa0470660:intron | 30.0% | |
| TAACACCATAATATGGATGT+TGG | - | chr3_3:72794440-72794459 | None:intergenic | 30.0% | |
| AACATCCATATTATGGTGTT+AGG | + | chr3_3:72794439-72794458 | Msa0470660:intron | 30.0% | |
| ! | ACATCCATATTATGGTGTTA+GGG | + | chr3_3:72794440-72794459 | Msa0470660:intron | 30.0% |
| ! | GCCTACATTAGGAATATTTT+TGG | + | chr3_3:72794593-72794612 | Msa0470660:intron | 30.0% |
| CTAGACTAGATATTGGATAT+TGG | - | chr3_3:72794732-72794751 | None:intergenic | 30.0% | |
| CAATATCCAATATCTAGTCT+AGG | + | chr3_3:72794730-72794749 | Msa0470660:intron | 30.0% | |
| AAAAAACCCTCTGATTCAAA+AGG | - | chr3_3:72794789-72794808 | None:intergenic | 30.0% | |
| !! | AATAAGGGTGCTTTAGTAAA+TGG | - | chr3_3:72794998-72795017 | None:intergenic | 30.0% |
| CACCTAACTACAATGAATAA+GGG | - | chr3_3:72795013-72795032 | None:intergenic | 30.0% | |
| ACACCTAACTACAATGAATA+AGG | - | chr3_3:72795014-72795033 | None:intergenic | 30.0% | |
| GTTTCATTGGTATTCTAATG+TGG | + | chr3_3:72795082-72795101 | Msa0470660:intron | 30.0% | |
| ATGAGACACTTATAATGAGA+TGG | + | chr3_3:72795135-72795154 | Msa0470660:intron | 30.0% | |
| ! | CATATTTAACCATCCGATTT+TGG | + | chr3_3:72795321-72795340 | Msa0470660:intron | 30.0% |
| TACCACATACTTACCAAAAT+CGG | - | chr3_3:72795337-72795356 | None:intergenic | 30.0% | |
| ! | TTCACCAGAAATGTTTTCTA+GGG | - | chr3_3:72795523-72795542 | None:intergenic | 30.0% |
| ! | ATTCACCAGAAATGTTTTCT+AGG | - | chr3_3:72795524-72795543 | None:intergenic | 30.0% |
| CGACTATTACAATTCATCTT+AGG | - | chr3_3:72795635-72795654 | None:intergenic | 30.0% | |
| TAGACTTTCTTTCTCTATTG+TGG | - | chr3_3:72795736-72795755 | None:intergenic | 30.0% | |
| AACAATATCCTATCCTATTC+TGG | + | chr3_3:72795788-72795807 | Msa0470660:intron | 30.0% | |
| TTGATACCAATTACCAGAAT+AGG | - | chr3_3:72795804-72795823 | None:intergenic | 30.0% | |
| !! | TTCAAGGTATTTTCTGGTAA+TGG | + | chr3_3:72795849-72795868 | Msa0470660:intron | 30.0% |
| !! | TCAAGGTATTTTCTGGTAAT+GGG | + | chr3_3:72795850-72795869 | Msa0470660:intron | 30.0% |
| TCAGAGGTCATAATAACAAA+AGG | - | chr3_3:72795915-72795934 | None:intergenic | 30.0% | |
| !! | TTTAAGAGTGTTACTTGTGT+GGG | - | chr3_3:72795996-72796015 | None:intergenic | 30.0% |
| ! | ATACAGAATTCAGGTATTGT+TGG | + | chr3_3:72796155-72796174 | Msa0470660:intron | 30.0% |
| TTCTATTAACCGTTTCTCTT+TGG | + | chr3_3:72796265-72796284 | Msa0470660:intron | 30.0% | |
| TCTATTAACCGTTTCTCTTT+GGG | + | chr3_3:72796266-72796285 | Msa0470660:intron | 30.0% | |
| ATATTTATAGTGTGACATGG+CGG | - | chr3_3:72796510-72796529 | None:intergenic | 30.0% | |
| CCATGTCACACTATAAATAT+CGG | + | chr3_3:72796510-72796529 | Msa0470660:intron | 30.0% | |
| CATGTCACACTATAAATATC+GGG | + | chr3_3:72796511-72796530 | Msa0470660:intron | 30.0% | |
| ! | TGATGTGACTTTTGATCAAA+TGG | + | chr3_3:72796633-72796652 | Msa0470660:intron | 30.0% |
| GTTAGACAAAGCCTAAATAT+TGG | + | chr3_3:72796702-72796721 | Msa0470660:intron | 30.0% | |
| AGAATTGGCAACCAATATTT+AGG | - | chr3_3:72796716-72796735 | None:intergenic | 30.0% | |
| ! | TTGCCAATTCTATAAGTTGA+TGG | + | chr3_3:72796725-72796744 | Msa0470660:intron | 30.0% |
| !! | TGCCAATTCTATAAGTTGAT+GGG | + | chr3_3:72796726-72796745 | Msa0470660:intron | 30.0% |
| ATCCCATCAACTTATAGAAT+TGG | - | chr3_3:72796731-72796750 | None:intergenic | 30.0% | |
| GTGTTGAATGTATACTTGTT+AGG | + | chr3_3:72796830-72796849 | Msa0470660:intron | 30.0% | |
| ! | ATACTTGTTAGGTATAATGC+TGG | + | chr3_3:72796841-72796860 | Msa0470660:intron | 30.0% |
| ! | TACTTGTTAGGTATAATGCT+GGG | + | chr3_3:72796842-72796861 | Msa0470660:intron | 30.0% |
| ! | CTCTTTTTCCAAGATACAAA+TGG | + | chr3_3:72796877-72796896 | Msa0470660:CDS | 30.0% |
| ATACTTAAAATATACCGACG+GGG | - | chr3_3:72796963-72796982 | None:intergenic | 30.0% | |
| TCGCGTATGTTATATTAATG+TGG | + | chr3_3:72797178-72797197 | Msa0470660:intron | 30.0% | |
| ACACTATACACACAATTTGA+GGG | - | chr3_3:72797347-72797366 | None:intergenic | 30.0% | |
| TACACTATACACACAATTTG+AGG | - | chr3_3:72797348-72797367 | None:intergenic | 30.0% | |
| AGCAACTATTTACTTGAACT+TGG | - | chr3_3:72797412-72797431 | None:intergenic | 30.0% | |
| AGTTCAAGTAAATAGTTGCT+AGG | + | chr3_3:72797412-72797431 | Msa0470660:intron | 30.0% | |
| GTTCAAGTAAATAGTTGCTA+GGG | + | chr3_3:72797413-72797432 | Msa0470660:intron | 30.0% | |
| ! | TGCTTATACTTTTACATGCT+TGG | + | chr3_3:72797504-72797523 | Msa0470660:intron | 30.0% |
| ! | TTATACTTTTACATGCTTGG+AGG | + | chr3_3:72797507-72797526 | Msa0470660:intron | 30.0% |
| GTTTATATTTCCTGGAAATG+GGG | - | chr3_3:72797753-72797772 | None:intergenic | 30.0% | |
| GGTTTATATTTCCTGGAAAT+GGG | - | chr3_3:72797754-72797773 | None:intergenic | 30.0% | |
| TGGTTTATATTTCCTGGAAA+TGG | - | chr3_3:72797755-72797774 | None:intergenic | 30.0% | |
| !!! | TGATAGCAATGTTTTAGTTG+TGG | + | chr3_3:72797974-72797993 | Msa0470660:intron | 30.0% |
| !!! | TTCCAGTTGATTTTAGAACT+TGG | + | chr3_3:72798083-72798102 | Msa0470660:intron | 30.0% |
| AGAAAATGGTAAAGCAAAGT+CGG | - | chr3_3:72798273-72798292 | None:intergenic | 30.0% | |
| TAGTTTAACCACAAACCAAT+TGG | - | chr3_3:72798359-72798378 | None:intergenic | 30.0% | |
| CATTGTAGATGTGTTATATC+AGG | - | chr3_3:72798466-72798485 | None:intergenic | 30.0% | |
| TCAATTGATGTAGATTGGAA+AGG | + | chr3_3:72798945-72798964 | Msa0470660:intron | 30.0% | |
| ATGTACAGAACTTCGAAAAT+AGG | + | chr3_3:72799188-72799207 | Msa0470660:intron | 30.0% | |
| GCAATGTGATAAAAATTGAG+TGG | + | chr3_3:72799628-72799647 | Msa0470660:intron | 30.0% | |
| GTGATAAAAATTGAGTGGAT+TGG | + | chr3_3:72799633-72799652 | Msa0470660:intron | 30.0% | |
| AGATAACACTCAAAACTCAA+AGG | + | chr3_3:72799682-72799701 | Msa0470660:intron | 30.0% | |
| AGATGCTAGAATTTCGTATT+AGG | + | chr3_3:72799842-72799861 | Msa0470660:intron | 30.0% | |
| !!! | TTAGACATGGTTTTAGCAAT+TGG | - | chr3_3:72799928-72799947 | None:intergenic | 30.0% |
| ! | ACAAAAGCACAAATTAGACA+TGG | - | chr3_3:72799941-72799960 | None:intergenic | 30.0% |
| !! | AGTTTTAGCAATTGGTATCT+AGG | - | chr3_3:72799972-72799991 | None:intergenic | 30.0% |
| ATTGAAAATCTTTCCGTAGA+TGG | + | chr3_3:72800219-72800238 | Msa0470660:CDS | 30.0% | |
| TTGAAAATCTTTCCGTAGAT+GGG | + | chr3_3:72800220-72800239 | Msa0470660:CDS | 30.0% | |
| GCATTTGCATACTAACTATT+TGG | + | chr3_3:72800324-72800343 | Msa0470660:intron | 30.0% | |
| TTGCATACTAACTATTTGGT+AGG | + | chr3_3:72800328-72800347 | Msa0470660:intron | 30.0% | |
| !! | AAAAGTTGATAACAATGCTG+AGG | - | chr3_3:72800420-72800439 | None:intergenic | 30.0% |
| ! | TGTTATCAACTTTTCTGCAT+AGG | + | chr3_3:72800426-72800445 | Msa0470660:intron | 30.0% |
| TTTCTGCATAGGTTATCATT+AGG | + | chr3_3:72800437-72800456 | Msa0470660:intron | 30.0% | |
| GAATTTGTCAATAACAACTG+TGG | + | chr3_3:72800511-72800530 | Msa0470660:intron | 30.0% | |
| ATTATATAGGTAAAGGTAGG+TGG | + | chr3_3:72800820-72800839 | Msa0470660:intron | 30.0% | |
| ATTTAACAAAGTTGAACAGG+TGG | + | chr3_3:72800930-72800949 | Msa0470660:CDS | 30.0% | |
| GAATAGATAATGAAGCACAA+GGG | - | chr3_3:72801027-72801046 | None:intergenic | 30.0% | |
| AGAATAGATAATGAAGCACA+AGG | - | chr3_3:72801028-72801047 | None:intergenic | 30.0% | |
| CATACACACACTTAAACTTA+AGG | + | chr3_3:72801316-72801335 | Msa0470660:three_prime_UTR | 30.0% | |
| AAAAGACAAGACAACAACGT+AGG | - | chr3_3:72793372-72793391 | None:intergenic | 35.0% | |
| AATGTTAAAATTGTCGCCGA+GGG | - | chr3_3:72793461-72793480 | None:intergenic | 35.0% | |
| ! | AAAAGGGTTATTTCCAGCTT+TGG | - | chr3_3:72793851-72793870 | None:intergenic | 35.0% |
| ATAATTGTGACTTACGGAAG+GGG | - | chr3_3:72793884-72793903 | None:intergenic | 35.0% | |
| ACACTGTGATGTAGTTTGAT+TGG | - | chr3_3:72794055-72794074 | None:intergenic | 35.0% | |
| AACAAAAAATGCAAGGACGT+TGG | - | chr3_3:72794128-72794147 | None:intergenic | 35.0% | |
| !! | TTTTTGTTTGTGCATGTTCG+GGG | + | chr3_3:72794140-72794159 | Msa0470660:intron | 35.0% |
| TGACAACTTCATCAAATTCG+AGG | + | chr3_3:72794236-72794255 | Msa0470660:CDS | 35.0% | |
| ! | TCTAGGATACAATGGGATTA+AGG | + | chr3_3:72794323-72794342 | Msa0470660:CDS | 35.0% |
| ACAACCCTAACACCATAATA+TGG | - | chr3_3:72794447-72794466 | None:intergenic | 35.0% | |
| ! | TATTATGGTGTTAGGGTTGT+TGG | + | chr3_3:72794447-72794466 | Msa0470660:intron | 35.0% |
| GATAAGCTCACAAATCACAA+TGG | - | chr3_3:72794476-72794495 | None:intergenic | 35.0% | |
| AATGTAGGCAGCGTTTAATT+TGG | - | chr3_3:72794582-72794601 | None:intergenic | 35.0% | |
| AATTAAACGCTGCCTACATT+AGG | + | chr3_3:72794582-72794601 | Msa0470660:intron | 35.0% | |
| GGTGGATCTTGATTAAATGA+AGG | + | chr3_3:72794614-72794633 | Msa0470660:intron | 35.0% | |
| GAGTAACCTAGACTAGATAT+TGG | - | chr3_3:72794739-72794758 | None:intergenic | 35.0% | |
| TCTAGGTTACTCACTCAATA+TGG | + | chr3_3:72794747-72794766 | Msa0470660:intron | 35.0% | |
| ATCACAACAAAGCATGAGAA+GGG | + | chr3_3:72794863-72794882 | Msa0470660:intron | 35.0% | |
| GATACTTAAAACGAGACAGA+GGG | - | chr3_3:72794906-72794925 | None:intergenic | 35.0% | |
| AGATACTTAAAACGAGACAG+AGG | - | chr3_3:72794907-72794926 | None:intergenic | 35.0% | |
| CACCCTTATTCATTGTAGTT+AGG | + | chr3_3:72795008-72795027 | Msa0470660:intron | 35.0% | |
| TGCTGAGATGCAATAAACAA+GGG | + | chr3_3:72795033-72795052 | Msa0470660:intron | 35.0% | |
| TCATTGGTATTCTAATGTGG+CGG | + | chr3_3:72795085-72795104 | Msa0470660:intron | 35.0% | |
| AGACACTTATAATGAGATGG+AGG | + | chr3_3:72795138-72795157 | Msa0470660:intron | 35.0% | |
| GACACTTATAATGAGATGGA+GGG | + | chr3_3:72795139-72795158 | Msa0470660:intron | 35.0% | |
| AGAGCAACCTAAAAGAAGAA+GGG | - | chr3_3:72795189-72795208 | None:intergenic | 35.0% | |
| AAGAGCAACCTAAAAGAAGA+AGG | - | chr3_3:72795190-72795209 | None:intergenic | 35.0% | |
| ACATACTTACCAAAATCGGA+TGG | - | chr3_3:72795333-72795352 | None:intergenic | 35.0% | |
| !! | ATCCGATTTTGGTAAGTATG+TGG | + | chr3_3:72795332-72795351 | Msa0470660:intron | 35.0% |
| ! | CTTTGAGAAACTTGTGTAGA+TGG | + | chr3_3:72795367-72795386 | Msa0470660:intron | 35.0% |
| GATCCTCAGTCATAGAAATT+GGG | - | chr3_3:72795408-72795427 | None:intergenic | 35.0% | |
| ! | TTGGGAAACCATTTTATGAG+AGG | - | chr3_3:72795704-72795723 | None:intergenic | 35.0% |
| TCCTATCCTATTCTGGTAAT+TGG | + | chr3_3:72795795-72795814 | Msa0470660:intron | 35.0% | |
| ACCAATTACCAGAATAGGAT+AGG | - | chr3_3:72795799-72795818 | None:intergenic | 35.0% | |
| CTGGTAATTGGTATCAACTA+TGG | + | chr3_3:72795807-72795826 | Msa0470660:intron | 35.0% | |
| !! | CTTTAAGAGTGTTACTTGTG+TGG | - | chr3_3:72795997-72796016 | None:intergenic | 35.0% |
| ACAAGTAACACTCTTAAAGC+AGG | + | chr3_3:72795998-72796017 | Msa0470660:CDS | 35.0% | |
| GAGCAGCTTATAGATCTTTA+AGG | + | chr3_3:72796366-72796385 | Msa0470660:intron | 35.0% | |
| CCGATATTTATAGTGTGACA+TGG | - | chr3_3:72796513-72796532 | None:intergenic | 35.0% | |
| AAATATCGGGATCAGTTCTA+TGG | + | chr3_3:72796524-72796543 | Msa0470660:intron | 35.0% | |
| GAGATTTATTGATCCAATGG+TGG | - | chr3_3:72796592-72796611 | None:intergenic | 35.0% | |
| GGTGAGATTTATTGATCCAA+TGG | - | chr3_3:72796595-72796614 | None:intergenic | 35.0% | |
| ! | TGTGACTTTTGATCAAATGG+TGG | + | chr3_3:72796636-72796655 | Msa0470660:intron | 35.0% |
| ! | GTATAATGCTGGGTTGAAAT+GGG | + | chr3_3:72796852-72796871 | Msa0470660:CDS | 35.0% |
| ACAGAAGTCCATTTGTATCT+TGG | - | chr3_3:72796888-72796907 | None:intergenic | 35.0% | |
| ! | TACAAATGGACTTCTGTTCA+AGG | + | chr3_3:72796891-72796910 | Msa0470660:CDS | 35.0% |
| AAGTATTAATTCGTGGATGC+AGG | + | chr3_3:72796977-72796996 | Msa0470660:intron | 35.0% | |
| AGAATTAACATGGTACTGCT+TGG | - | chr3_3:72797033-72797052 | None:intergenic | 35.0% | |
| GTACTGCAAGAGAATTAACA+TGG | - | chr3_3:72797043-72797062 | None:intergenic | 35.0% | |
| TTAATTCTCTTGCAGTACCT+CGG | + | chr3_3:72797045-72797064 | Msa0470660:CDS | 35.0% | |
| AAAGCAAAAGAAGCTATTGG+TGG | + | chr3_3:72797068-72797087 | Msa0470660:CDS | 35.0% | |
| AATCAACTTACCATCTGAGT+GGG | - | chr3_3:72797108-72797127 | None:intergenic | 35.0% | |
| ACACTTGCATCATAACACAT+AGG | + | chr3_3:72797212-72797231 | Msa0470660:intron | 35.0% | |
| ! | TTGGTTCGTTAAGATTTCAC+AGG | - | chr3_3:72797310-72797329 | None:intergenic | 35.0% |
| CACATGACCATTAAAATGAC+AGG | + | chr3_3:72797629-72797648 | Msa0470660:intron | 35.0% | |
| TGACCATTAAAATGACAGGA+AGG | + | chr3_3:72797633-72797652 | Msa0470660:intron | 35.0% | |
| !!! | AGACCTTCCTGTCATTTTAA+TGG | - | chr3_3:72797639-72797658 | None:intergenic | 35.0% |
| TAAAATGACAGGAAGGTCTA+TGG | + | chr3_3:72797640-72797659 | Msa0470660:intron | 35.0% | |
| AAGGTCTATGGTGATAAATG+TGG | + | chr3_3:72797652-72797671 | Msa0470660:CDS | 35.0% | |
| TTATCATGTCATATGGTGTG+AGG | + | chr3_3:72797888-72797907 | Msa0470660:intron | 35.0% | |
| !!! | AGCAATGTTTTAGTTGTGGT+TGG | + | chr3_3:72797978-72797997 | Msa0470660:intron | 35.0% |
| TGATGCAGTTCATCTATGTA+AGG | - | chr3_3:72798022-72798041 | None:intergenic | 35.0% | |
| !! | GACCAAGTTCTAAAATCAAC+TGG | - | chr3_3:72798088-72798107 | None:intergenic | 35.0% |
| !! | GAACTATTCCAATTGGTTTG+TGG | + | chr3_3:72798348-72798367 | Msa0470660:intron | 35.0% |
| !!! | CGATTTAAATGCTGTTTTGC+TGG | - | chr3_3:72798519-72798538 | None:intergenic | 35.0% |
| AAATGACATCACAGCATGTA+CGG | - | chr3_3:72798709-72798728 | None:intergenic | 35.0% | |
| !!! | CATGCTGTGATGTCATTTTA+TGG | + | chr3_3:72798711-72798730 | Msa0470660:intron | 35.0% |
| ACAATTACATAGGACCAGTT+AGG | - | chr3_3:72798763-72798782 | None:intergenic | 35.0% | |
| CAAGCCCTTAACTTTCTAAA+AGG | + | chr3_3:72799289-72799308 | Msa0470660:intron | 35.0% | |
| !!! | TTTTATCTGAAGGTGCCAAA+AGG | + | chr3_3:72799341-72799360 | Msa0470660:intron | 35.0% |
| ! | CTATGGTATGGATTTCCTTT+TGG | - | chr3_3:72799359-72799378 | None:intergenic | 35.0% |
| ATATATAGCCATTTCTCCAG+AGG | - | chr3_3:72799387-72799406 | None:intergenic | 35.0% | |
| TCAGGGAAGAAATTTCACAA+AGG | + | chr3_3:72799777-72799796 | Msa0470660:intron | 35.0% | |
| CAGGGAAGAAATTTCACAAA+GGG | + | chr3_3:72799778-72799797 | Msa0470660:intron | 35.0% | |
| AGGGAAGAAATTTCACAAAG+GGG | + | chr3_3:72799779-72799798 | Msa0470660:intron | 35.0% | |
| TTAGGTGATTTGAGCATGTA+CGG | + | chr3_3:72799860-72799879 | Msa0470660:intron | 35.0% | |
| AGACCTTAGAAACAATAGCA+AGG | + | chr3_3:72799886-72799905 | Msa0470660:intron | 35.0% | |
| !! | TCTCCTTGCTATTGTTTCTA+AGG | - | chr3_3:72799892-72799911 | None:intergenic | 35.0% |
| CCATTGAAAATCTGCAATAC+TGG | - | chr3_3:72800060-72800079 | None:intergenic | 35.0% | |
| ! | CCAGTATTGCAGATTTTCAA+TGG | + | chr3_3:72800057-72800076 | Msa0470660:CDS | 35.0% |
| !!! | ATTTTGGCTTCCATGTGATA+CGG | - | chr3_3:72800104-72800123 | None:intergenic | 35.0% |
| TATCACATGGAAGCCAAAAT+GGG | + | chr3_3:72800104-72800123 | Msa0470660:CDS | 35.0% | |
| GAGTGTAGACTTATGAGAAA+TGG | - | chr3_3:72800175-72800194 | None:intergenic | 35.0% | |
| TGAAAATCTTTCCGTAGATG+GGG | + | chr3_3:72800221-72800240 | Msa0470660:CDS | 35.0% | |
| GCATAGGTTATCATTAGGTA+TGG | + | chr3_3:72800442-72800461 | Msa0470660:intron | 35.0% | |
| !! | TTTTTGAAGAGATAGTGGTG+GGG | - | chr3_3:72800709-72800728 | None:intergenic | 35.0% |
| !! | CTTTTTGAAGAGATAGTGGT+GGG | - | chr3_3:72800710-72800729 | None:intergenic | 35.0% |
| !! | ACTTTTTGAAGAGATAGTGG+TGG | - | chr3_3:72800711-72800730 | None:intergenic | 35.0% |
| GACGAATCTTTGTAGTCAAT+TGG | - | chr3_3:72800877-72800896 | None:intergenic | 35.0% | |
| GAAGAGAAATATTCTAAGCC+AGG | + | chr3_3:72800952-72800971 | Msa0470660:CDS | 35.0% | |
| TGTGAGCTATAAATTGGGTT+TGG | + | chr3_3:72801062-72801081 | Msa0470660:three_prime_UTR | 35.0% | |
| GTGAGCTATAAATTGGGTTT+GGG | + | chr3_3:72801063-72801082 | Msa0470660:three_prime_UTR | 35.0% | |
| !!! | TTGAAGGGTTTTTTGCACAA+TGG | + | chr3_3:72801136-72801155 | Msa0470660:three_prime_UTR | 35.0% |
| CAAGCGTGCCAATATAAAAA+GGG | - | chr3_3:72801285-72801304 | None:intergenic | 35.0% | |
| TCAAGCGTGCCAATATAAAA+AGG | - | chr3_3:72801286-72801305 | None:intergenic | 35.0% | |
| ! | CTTAAACTTAAGGGTGTGAA+TGG | + | chr3_3:72801326-72801345 | Msa0470660:three_prime_UTR | 35.0% |
| ATTCCAATTCCATTCCACCA+TGG | + | chr3_3:72793429-72793448 | Msa0470660:exon | 40.0% | |
| GAATGTTAAAATTGTCGCCG+AGG | - | chr3_3:72793462-72793481 | None:intergenic | 40.0% | |
| AACTCTTGCTGAATGAATCG+AGG | - | chr3_3:72793565-72793584 | None:intergenic | 40.0% | |
| TCGATTCATTCAGCAAGAGT+TGG | + | chr3_3:72793564-72793583 | Msa0470660:intron | 40.0% | |
| AATGGAAACCTGATCGAAGA+AGG | - | chr3_3:72793671-72793690 | None:intergenic | 40.0% | |
| TATAAGCTTCCAAACCACCA+GGG | - | chr3_3:72793798-72793817 | None:intergenic | 40.0% | |
| ATATAAGCTTCCAAACCACC+AGG | - | chr3_3:72793799-72793818 | None:intergenic | 40.0% | |
| ! | GCTGGAAATAACCCTTTTGA+TGG | + | chr3_3:72793853-72793872 | Msa0470660:CDS | 40.0% |
| AGTGTATGCCGTGATTTGAT+TGG | + | chr3_3:72794070-72794089 | Msa0470660:intron | 40.0% | |
| TGCCGTGATTTGATTGGAAT+TGG | + | chr3_3:72794076-72794095 | Msa0470660:intron | 40.0% | |
| ! | ATGATTTTGCAGGTTCCAAC+TGG | + | chr3_3:72794192-72794211 | Msa0470660:intron | 40.0% |
| AATGTCAATGTCTCACCAGT+TGG | - | chr3_3:72794210-72794229 | None:intergenic | 40.0% | |
| ACTGGTGAGACATTGACATT+TGG | + | chr3_3:72794210-72794229 | Msa0470660:CDS | 40.0% | |
| TTCATCAAATTCGAGGAAGC+AGG | + | chr3_3:72794243-72794262 | Msa0470660:CDS | 40.0% | |
| AGTCATCCTAGTCTAACACA+CGG | - | chr3_3:72794697-72794716 | None:intergenic | 40.0% | |
| ! | CTCTCTCCTTTTGAATCAGA+GGG | + | chr3_3:72794780-72794799 | Msa0470660:intron | 40.0% |
| ! | TCATGCTTTGTTGTGATGGA+GGG | - | chr3_3:72794860-72794879 | None:intergenic | 40.0% |
| ! | CTTCTCATGCTTTGTTGTGA+TGG | - | chr3_3:72794864-72794883 | None:intergenic | 40.0% |
| CATCACAACAAAGCATGAGA+AGG | + | chr3_3:72794862-72794881 | Msa0470660:intron | 40.0% | |
| GTGCTGAGATGCAATAAACA+AGG | + | chr3_3:72795032-72795051 | Msa0470660:intron | 40.0% | |
| ! | GCTTCTTCCCTTCTTCTTTT+AGG | + | chr3_3:72795179-72795198 | Msa0470660:intron | 40.0% |
| !!! | CTTCTTTTAGGTTGCTCTTC+CGG | + | chr3_3:72795191-72795210 | Msa0470660:intron | 40.0% |
| ! | TGCTTCTTGAAGTGCCAATA+TGG | - | chr3_3:72795262-72795281 | None:intergenic | 40.0% |
| GTACCCAATTTCTATGACTG+AGG | + | chr3_3:72795402-72795421 | Msa0470660:intron | 40.0% | |
| GGATCCTCAGTCATAGAAAT+TGG | - | chr3_3:72795409-72795428 | None:intergenic | 40.0% | |
| TCGACTGTTAGCACAAACAT+AGG | + | chr3_3:72795652-72795671 | Msa0470660:intron | 40.0% | |
| !! | GCTTTTCAACTTTCAGGTGA+AGG | + | chr3_3:72795876-72795895 | Msa0470660:intron | 40.0% |
| ! | GGTATGTCTTTTACGTCTTG+TGG | + | chr3_3:72796019-72796038 | Msa0470660:intron | 40.0% |
| GTCTTGTGGAAAGTTCAATC+TGG | + | chr3_3:72796033-72796052 | Msa0470660:intron | 40.0% | |
| TTCGTCTACCCAAAGAGAAA+CGG | - | chr3_3:72796277-72796296 | None:intergenic | 40.0% | |
| CATTCACTTCTTCATTCCAG+CGG | + | chr3_3:72796319-72796338 | Msa0470660:CDS | 40.0% | |
| ! | GGTATAATGCTGGGTTGAAA+TGG | + | chr3_3:72796851-72796870 | Msa0470660:intron | 40.0% |
| ! | ATCTTCCTTTATTTCCCCGT+CGG | + | chr3_3:72796946-72796965 | Msa0470660:intron | 40.0% |
| ATATACCGACGGGGAAATAA+AGG | - | chr3_3:72796954-72796973 | None:intergenic | 40.0% | |
| ! | ATAGCTTCTTTTGCTTTCCG+AGG | - | chr3_3:72797065-72797084 | None:intergenic | 40.0% |
| CGGAAAGCAAAAGAAGCTAT+TGG | + | chr3_3:72797065-72797084 | Msa0470660:CDS | 40.0% | |
| AAGCTATTGGTGGAATTACC+AGG | + | chr3_3:72797078-72797097 | Msa0470660:CDS | 40.0% | |
| CAATCAACTTACCATCTGAG+TGG | - | chr3_3:72797109-72797128 | None:intergenic | 40.0% | |
| ACTAGCGTCTTTGTCTATGA+GGG | - | chr3_3:72797138-72797157 | None:intergenic | 40.0% | |
| ! | GAGGGTATGAAAAAGCTACT+TGG | - | chr3_3:72797329-72797348 | None:intergenic | 40.0% |
| AAAAGATGAATTCCACGGCT+GGG | - | chr3_3:72797821-72797840 | None:intergenic | 40.0% | |
| AAAAAGATGAATTCCACGGC+TGG | - | chr3_3:72797822-72797841 | None:intergenic | 40.0% | |
| AGATTGTCACTATGCAATCG+TGG | - | chr3_3:72798053-72798072 | None:intergenic | 40.0% | |
| TTTGTGAGCTCTTCGATGTA+AGG | - | chr3_3:72798110-72798129 | None:intergenic | 40.0% | |
| ATCGAAGAGCTCACAAAAAC+AGG | + | chr3_3:72798113-72798132 | Msa0470660:CDS | 40.0% | |
| TGGGTTAACAAACTCCTGTA+TGG | - | chr3_3:72798144-72798163 | None:intergenic | 40.0% | |
| ATGTTGTATTTACGCACTGC+AGG | + | chr3_3:72798483-72798502 | Msa0470660:intron | 40.0% | |
| GGCTGTTTGATTGTTATGCT+TGG | + | chr3_3:72798732-72798751 | Msa0470660:intron | 40.0% | |
| !! | TATGCTTGGTGTTACCTAAC+TGG | + | chr3_3:72798746-72798765 | Msa0470660:intron | 40.0% |
| CATCACCTGCACAATTACAT+AGG | - | chr3_3:72798773-72798792 | None:intergenic | 40.0% | |
| CTATGTAATTGTGCAGGTGA+TGG | + | chr3_3:72798771-72798790 | Msa0470660:intron | 40.0% | |
| ACCTGTGAAAAATAATGCCG+AGG | + | chr3_3:72798813-72798832 | Msa0470660:CDS | 40.0% | |
| !! | TCCTCGGCATTATTTTTCAC+AGG | - | chr3_3:72798817-72798836 | None:intergenic | 40.0% |
| ATTGTATAAAGGCTGGGTGA+TGG | + | chr3_3:72799019-72799038 | Msa0470660:intron | 40.0% | |
| TCAAGACTTGCAGGTTACAA+GGG | - | chr3_3:72799453-72799472 | None:intergenic | 40.0% | |
| TTCAAGACTTGCAGGTTACA+AGG | - | chr3_3:72799454-72799473 | None:intergenic | 40.0% | |
| ! | TATTCTGTACGATGGACTCA+AGG | - | chr3_3:72799579-72799598 | None:intergenic | 40.0% |
| !! | TTGAGTGGATTGGATTGCTT+TGG | + | chr3_3:72799643-72799662 | Msa0470660:intron | 40.0% |
| !! | TGAGTGGATTGGATTGCTTT+GGG | + | chr3_3:72799644-72799663 | Msa0470660:intron | 40.0% |
| GGGAAGAAATTTCACAAAGG+GGG | + | chr3_3:72799780-72799799 | Msa0470660:intron | 40.0% | |
| ATTTCACAAAGGGGGTTATC+AGG | + | chr3_3:72799788-72799807 | Msa0470660:intron | 40.0% | |
| TTTCACAAAGGGGGTTATCA+GGG | + | chr3_3:72799789-72799808 | Msa0470660:intron | 40.0% | |
| ! | GCAGATTTTCAATGGTCAAG+AGG | + | chr3_3:72800065-72800084 | Msa0470660:CDS | 40.0% |
| ATGGTCAAGAGGTTGAAGTT+TGG | + | chr3_3:72800076-72800095 | Msa0470660:CDS | 40.0% | |
| !!! | TTTTGGCTTCCATGTGATAC+GGG | - | chr3_3:72800103-72800122 | None:intergenic | 40.0% |
| GTATCACATGGAAGCCAAAA+TGG | + | chr3_3:72800103-72800122 | Msa0470660:CDS | 40.0% | |
| ATCACATGGAAGCCAAAATG+GGG | + | chr3_3:72800105-72800124 | Msa0470660:CDS | 40.0% | |
| TCAATCAAGAGCAAAGTCAG+TGG | + | chr3_3:72800141-72800160 | Msa0470660:CDS | 40.0% | |
| TATGATAAGAGCCCCATCTA+CGG | - | chr3_3:72800235-72800254 | None:intergenic | 40.0% | |
| ATAACAATGCTGAGGAGTAG+GGG | - | chr3_3:72800412-72800431 | None:intergenic | 40.0% | |
| GATAACAATGCTGAGGAGTA+GGG | - | chr3_3:72800413-72800432 | None:intergenic | 40.0% | |
| TGATAACAATGCTGAGGAGT+AGG | - | chr3_3:72800414-72800433 | None:intergenic | 40.0% | |
| ! | TAGGTATGGTTTTCGCCTAT+AGG | + | chr3_3:72800456-72800475 | Msa0470660:intron | 40.0% |
| !! | GATGACTGGTTTATCAAGTG+TGG | - | chr3_3:72800560-72800579 | None:intergenic | 40.0% |
| AAATGCATCTTCAAGCCTTG+AGG | - | chr3_3:72800987-72801006 | None:intergenic | 40.0% | |
| CATAAAATTCCCCCTAGTCA+AGG | - | chr3_3:72801228-72801247 | None:intergenic | 40.0% | |
| AGATCGACATAGTTACCGAC+CGG | + | chr3_3:72793306-72793325 | Msa0470660:five_prime_UTR | 45.0% | |
| GACAAGACAACAACGTAGGT+AGG | - | chr3_3:72793368-72793387 | None:intergenic | 45.0% | |
| ! | AAGCCATGGTGGAATGGAAT+TGG | - | chr3_3:72793435-72793454 | None:intergenic | 45.0% |
| TAACATTCTCTCGGCGAAAC+AGG | + | chr3_3:72793474-72793493 | Msa0470660:CDS | 45.0% | |
| GAGAGAGAGAGAGAGAGTAA+AGG | - | chr3_3:72793502-72793521 | None:intergenic | 45.0% | |
| GAAGAAAGCCTTCTTCGATC+AGG | + | chr3_3:72793660-72793679 | Msa0470660:CDS | 45.0% | |
| CAATAACGCCAAACGACTCT+TGG | + | chr3_3:72793819-72793838 | Msa0470660:CDS | 45.0% | |
| AAGGGGTGAAGCCATCAAAA+GGG | - | chr3_3:72793867-72793886 | None:intergenic | 45.0% | |
| !!! | GCTGCTTTTGTTCTTGTTGC+TGG | + | chr3_3:72794285-72794304 | Msa0470660:CDS | 45.0% |
| ! | GCTTTTGTTCTTGTTGCTGG+CGG | + | chr3_3:72794288-72794307 | Msa0470660:CDS | 45.0% |
| ! | GTGAGCGTCTAGGATACAAT+GGG | + | chr3_3:72794316-72794335 | Msa0470660:CDS | 45.0% |
| AAGAAGCCGTGTGTTAGACT+AGG | + | chr3_3:72794688-72794707 | Msa0470660:intron | 45.0% | |
| ACTCACTCAATATGGCACTG+TGG | + | chr3_3:72794755-72794774 | Msa0470660:intron | 45.0% | |
| CTCACTCAATATGGCACTGT+GGG | + | chr3_3:72794756-72794775 | Msa0470660:intron | 45.0% | |
| CCTCTGATTCAAAAGGAGAG+AGG | - | chr3_3:72794782-72794801 | None:intergenic | 45.0% | |
| ! | CCTCTCTCCTTTTGAATCAG+AGG | + | chr3_3:72794779-72794798 | Msa0470660:intron | 45.0% |
| ! | CTCATGCTTTGTTGTGATGG+AGG | - | chr3_3:72794861-72794880 | None:intergenic | 45.0% |
| CTTCAAGAAGCAAGCTCAGA+AGG | + | chr3_3:72795270-72795289 | Msa0470660:CDS | 45.0% | |
| AGCGCCCTAGAAAACATTTC+TGG | + | chr3_3:72795516-72795535 | Msa0470660:intron | 45.0% | |
| ! | GGGTGTGCTTTTCAACTTTC+AGG | + | chr3_3:72795870-72795889 | Msa0470660:intron | 45.0% |
| ATGACCTCTGATGACACTCA+TGG | + | chr3_3:72795924-72795943 | Msa0470660:CDS | 45.0% | |
| TGACCTCTGATGACACTCAT+GGG | + | chr3_3:72795925-72795944 | Msa0470660:CDS | 45.0% | |
| GCTTAGACGATAATGATGCC+AGG | + | chr3_3:72796109-72796128 | Msa0470660:CDS | 45.0% | |
| TAATGATGCCAGGCTTGCAT+TGG | + | chr3_3:72796119-72796138 | Msa0470660:CDS | 45.0% | |
| ! | TTTTGGATCCAATGCAAGCC+TGG | - | chr3_3:72796130-72796149 | None:intergenic | 45.0% |
| TTTGGGTAGACGAAACCTCA+TGG | + | chr3_3:72796283-72796302 | Msa0470660:intron | 45.0% | |
| TTGGGTAGACGAAACCTCAT+GGG | + | chr3_3:72796284-72796303 | Msa0470660:intron | 45.0% | |
| CCATACTTTCAGAATACCGC+TGG | - | chr3_3:72796338-72796357 | None:intergenic | 45.0% | |
| ! | CCAGCGGTATTCTGAAAGTA+TGG | + | chr3_3:72796335-72796354 | Msa0470660:CDS | 45.0% |
| ! | CACAAGCTAGTTTCCACCAT+TGG | + | chr3_3:72796576-72796595 | Msa0470660:intron | 45.0% |
| GTGGAAAGAACACTTGTGCA+TGG | + | chr3_3:72796655-72796674 | Msa0470660:intron | 45.0% | |
| CACTAGCGTCTTTGTCTATG+AGG | - | chr3_3:72797139-72797158 | None:intergenic | 45.0% | |
| !! | CTAGTGCTGAATGCTGATTC+TGG | + | chr3_3:72797153-72797172 | Msa0470660:intron | 45.0% |
| TATCCACTTGCTCTCAGAAG+AGG | - | chr3_3:72797695-72797714 | None:intergenic | 45.0% | |
| GAAGAGCTCACAAAAACAGG+AGG | + | chr3_3:72798116-72798135 | Msa0470660:CDS | 45.0% | |
| !! | AAAAACAGGAGGTGCCATAC+AGG | + | chr3_3:72798127-72798146 | Msa0470660:CDS | 45.0% |
| TCGGATGCAACAACAAAGCA+TGG | - | chr3_3:72798254-72798273 | None:intergenic | 45.0% | |
| CTGGTCCTATGTAATTGTGC+AGG | + | chr3_3:72798765-72798784 | Msa0470660:intron | 45.0% | |
| !! | TTGTGCAGGTGATGGAAACA+TGG | + | chr3_3:72798779-72798798 | Msa0470660:intron | 45.0% |
| TTTCTCCAGAGGTAGCACTA+TGG | - | chr3_3:72799376-72799395 | None:intergenic | 45.0% | |
| ! | TAGTGCTACCTCTGGAGAAA+TGG | + | chr3_3:72799376-72799395 | Msa0470660:CDS | 45.0% |
| TCACAGCATTCAAGACTTGC+AGG | - | chr3_3:72799462-72799481 | None:intergenic | 45.0% | |
| AGTCTTGAATGCTGTGACAC+AGG | + | chr3_3:72799465-72799484 | Msa0470660:intron | 45.0% | |
| TCTAGCATCTTCGCTGCAAA+GGG | - | chr3_3:72799832-72799851 | None:intergenic | 45.0% | |
| TTCTAGCATCTTCGCTGCAA+AGG | - | chr3_3:72799833-72799852 | None:intergenic | 45.0% | |
| ! | TGCATTCTTTTTGCCCTTCC+AGG | + | chr3_3:72800014-72800033 | Msa0470660:intron | 45.0% |
| GCAATACTGGATCTGCTACT+TGG | - | chr3_3:72800047-72800066 | None:intergenic | 45.0% | |
| ! | TTTGGCTTCCATGTGATACG+GGG | - | chr3_3:72800102-72800121 | None:intergenic | 45.0% |
| ! | GAGAAAGTCAGACCCCATTT+TGG | - | chr3_3:72800120-72800139 | None:intergenic | 45.0% |
| TAAGTCTACACTCGCGATCA+AGG | + | chr3_3:72800182-72800201 | Msa0470660:CDS | 45.0% | |
| AAGTCTACACTCGCGATCAA+GGG | + | chr3_3:72800183-72800202 | Msa0470660:CDS | 45.0% | |
| ATGCAGCAAAACACTCGTCA+AGG | - | chr3_3:72800308-72800327 | None:intergenic | 45.0% | |
| GGGGGTAGTGTTAGGAAAAA+AGG | - | chr3_3:72800393-72800412 | None:intergenic | 45.0% | |
| TAACAATGCTGAGGAGTAGG+GGG | - | chr3_3:72800411-72800430 | None:intergenic | 45.0% | |
| AGGTGGTTCAGTTCAGAACA+AGG | + | chr3_3:72800837-72800856 | Msa0470660:CDS | 45.0% | |
| GGTGGTTCAGTTCAGAACAA+GGG | + | chr3_3:72800838-72800857 | Msa0470660:CDS | 45.0% | |
| GTTCAGTTCAGAACAAGGGT+TGG | + | chr3_3:72800842-72800861 | Msa0470660:CDS | 45.0% | |
| CCTCTGATTCTCAATACCTC+AGG | - | chr3_3:72800904-72800923 | None:intergenic | 45.0% | |
| !! | CCTGAGGTATTGAGAATCAG+AGG | + | chr3_3:72800901-72800920 | Msa0470660:CDS | 45.0% |
| GTTACTCCACACAGAAACCT+AGG | - | chr3_3:72801172-72801191 | None:intergenic | 45.0% | |
| ! | AGATTAGCTCCACCTTGACT+AGG | + | chr3_3:72801213-72801232 | Msa0470660:three_prime_UTR | 45.0% |
| ! | GATTAGCTCCACCTTGACTA+GGG | + | chr3_3:72801214-72801233 | Msa0470660:three_prime_UTR | 45.0% |
| ATTAGCTCCACCTTGACTAG+GGG | + | chr3_3:72801215-72801234 | Msa0470660:three_prime_UTR | 45.0% | |
| AAAATTCCCCCTAGTCAAGG+TGG | - | chr3_3:72801225-72801244 | None:intergenic | 45.0% | |
| GTTAAAATTGTCGCCGAGGG+AGG | - | chr3_3:72793458-72793477 | None:intergenic | 50.0% | |
| CTACTTGATTCCAGCTACCC+TGG | + | chr3_3:72793778-72793797 | Msa0470660:CDS | 50.0% | |
| GGAATCAGCCAAGAGTCGTT+TGG | - | chr3_3:72793830-72793849 | None:intergenic | 50.0% | |
| ! | CTCTTGGCTGATTCCAAAGC+TGG | + | chr3_3:72793835-72793854 | Msa0470660:CDS | 50.0% |
| GAAGGGGTGAAGCCATCAAA+AGG | - | chr3_3:72793868-72793887 | None:intergenic | 50.0% | |
| GTTTGTGCATGTTCGGGGAA+TGG | + | chr3_3:72794145-72794164 | Msa0470660:intron | 50.0% | |
| ! | GGTGAGCGTCTAGGATACAA+TGG | + | chr3_3:72794315-72794334 | Msa0470660:CDS | 50.0% |
| !!! | CTTTTAGGTTGCTCTTCCGG+CGG | + | chr3_3:72795194-72795213 | Msa0470660:intron | 50.0% |
| TCTTCCGGCGGAAACAACTA+CGG | + | chr3_3:72795206-72795225 | Msa0470660:CDS | 50.0% | |
| TAGACGAAACCTCATGGGCA+TGG | + | chr3_3:72796289-72796308 | Msa0470660:intron | 50.0% | |
| CAGGCAATTCCATCAGCACT+GGG | + | chr3_3:72796996-72797015 | Msa0470660:intron | 50.0% | |
| ! | GATCCTCTTCTGAGAGCAAG+TGG | + | chr3_3:72797689-72797708 | Msa0470660:CDS | 50.0% |
| AGAGCAAGTGGATACCCAGA+CGG | + | chr3_3:72797701-72797720 | Msa0470660:CDS | 50.0% | |
| ! | GCAGATGGGGGCAATGTTTT+TGG | - | chr3_3:72798575-72798594 | None:intergenic | 50.0% |
| ATTTACCGTGAAGCCAACCC+TGG | - | chr3_3:72798597-72798616 | None:intergenic | 50.0% | |
| TAATGCCGAGGATGCTGCTA+AGG | + | chr3_3:72798825-72798844 | Msa0470660:CDS | 50.0% | |
| CAGTACCTTAGCAGCATCCT+CGG | - | chr3_3:72798833-72798852 | None:intergenic | 50.0% | |
| CCAGAGGTAGCACTATGGTA+TGG | - | chr3_3:72799371-72799390 | None:intergenic | 50.0% | |
| CCATACCATAGTGCTACCTC+TGG | + | chr3_3:72799368-72799387 | Msa0470660:CDS | 50.0% | |
| TAGCATCTTCGCTGCAAAGG+GGG | - | chr3_3:72799830-72799849 | None:intergenic | 50.0% | |
| CTAGCATCTTCGCTGCAAAG+GGG | - | chr3_3:72799831-72799850 | None:intergenic | 50.0% | |
| ! | TTCTTTTTGCCCTTCCAGGC+TGG | + | chr3_3:72800018-72800037 | Msa0470660:intron | 50.0% |
| ACTTGGAAACCAGCCTGGAA+GGG | - | chr3_3:72800030-72800049 | None:intergenic | 50.0% | |
| TACTTGGAAACCAGCCTGGA+AGG | - | chr3_3:72800031-72800050 | None:intergenic | 50.0% | |
| AAGTTTGGCCCCGTATCACA+TGG | + | chr3_3:72800091-72800110 | Msa0470660:CDS | 50.0% | |
| GAATACCTCTGCATCGTCGA+CGG | - | chr3_3:72800262-72800281 | None:intergenic | 50.0% | |
| CAAAGATTCGTCAGAGCCTG+AGG | + | chr3_3:72800885-72800904 | Msa0470660:CDS | 50.0% | |
| GCCAGGCAAATTTCACCTCA+AGG | + | chr3_3:72800969-72800988 | Msa0470660:CDS | 50.0% | |
| GCCTTGAGGTGAAATTTGCC+TGG | - | chr3_3:72800973-72800992 | None:intergenic | 50.0% | |
| ACACAGAAACCTAGGTGGGA+GGG | - | chr3_3:72801164-72801183 | None:intergenic | 50.0% | |
| CTCCACACAGAAACCTAGGT+GGG | - | chr3_3:72801168-72801187 | None:intergenic | 50.0% | |
| ACTCCACACAGAAACCTAGG+TGG | - | chr3_3:72801169-72801188 | None:intergenic | 50.0% | |
| TTAGCTCCACCTTGACTAGG+GGG | + | chr3_3:72801216-72801235 | Msa0470660:three_prime_UTR | 50.0% | |
| GACATAGTTACCGACCGGCA+CGG | + | chr3_3:72793311-72793330 | Msa0470660:five_prime_UTR | 55.0% | |
| !! | GTTTATTAGCGGTGCCGTGC+CGG | - | chr3_3:72793328-72793347 | None:intergenic | 55.0% |
| AATCGCGGAAGAGGTGGTCT+TGG | - | chr3_3:72793612-72793631 | None:intergenic | 55.0% | |
| AAGACCACCTCTTCCGCGAT+TGG | + | chr3_3:72793611-72793630 | Msa0470660:CDS | 55.0% | |
| CTTGATTCCAGCTACCCTGG+TGG | + | chr3_3:72793781-72793800 | Msa0470660:CDS | 55.0% | |
| TTCCAGCTACCCTGGTGGTT+TGG | + | chr3_3:72793786-72793805 | Msa0470660:CDS | 55.0% | |
| TTCCAAACCACCAGGGTAGC+TGG | - | chr3_3:72793791-72793810 | None:intergenic | 55.0% | |
| GTTCTTGTTGCTGGCGGTCT+TGG | + | chr3_3:72794294-72794313 | Msa0470660:CDS | 55.0% | |
| CTTCCGGCGGAAACAACTAC+GGG | + | chr3_3:72795207-72795226 | Msa0470660:CDS | 55.0% | |
| ! | GTTCCCGTAGTTGTTTCCGC+CGG | - | chr3_3:72795213-72795232 | None:intergenic | 55.0% |
| ACGCCCATGAGTGTCATCAG+AGG | - | chr3_3:72795931-72795950 | None:intergenic | 55.0% | |
| GCAGGCAATTCCATCAGCAC+TGG | + | chr3_3:72796995-72797014 | Msa0470660:intron | 55.0% | |
| ! | GAACTGACACCCAGTGCTGA+TGG | - | chr3_3:72797008-72797027 | None:intergenic | 55.0% |
| CGCTGTTGACATCACCGTCT+GGG | - | chr3_3:72797718-72797737 | None:intergenic | 55.0% | |
| TCGCTGTTGACATCACCGTC+TGG | - | chr3_3:72797719-72797738 | None:intergenic | 55.0% | |
| GGTGATGTCAACAGCGAGAC+CGG | + | chr3_3:72797722-72797741 | Msa0470660:CDS | 55.0% | |
| TCCTGGAAATGGGGAGTAGC+CGG | - | chr3_3:72797744-72797763 | None:intergenic | 55.0% | |
| GATGAATTCCACGGCTGGGA+GGG | - | chr3_3:72797817-72797836 | None:intergenic | 55.0% | |
| AGATGAATTCCACGGCTGGG+AGG | - | chr3_3:72797818-72797837 | None:intergenic | 55.0% | |
| AAACATTGCCCCCATCTGCC+AGG | + | chr3_3:72798576-72798595 | Msa0470660:CDS | 55.0% | |
| AACATTGCCCCCATCTGCCA+GGG | + | chr3_3:72798577-72798596 | Msa0470660:CDS | 55.0% | |
| TGAAGCCAACCCTGGCAGAT+GGG | - | chr3_3:72798589-72798608 | None:intergenic | 55.0% | |
| !! | ATCTGCCAGGGTTGGCTTCA+CGG | + | chr3_3:72798589-72798608 | Msa0470660:CDS | 55.0% |
| ! | AGGCTGGGTGATGGTGTCTT+AGG | + | chr3_3:72799028-72799047 | Msa0470660:intron | 55.0% |
| ! | CTGCTACTTGGAAACCAGCC+TGG | - | chr3_3:72800035-72800054 | None:intergenic | 55.0% |
| GAGGAGTAGGGGGTAGTGTT+AGG | - | chr3_3:72800401-72800420 | None:intergenic | 55.0% | |
| CACACAGAAACCTAGGTGGG+AGG | - | chr3_3:72801165-72801184 | None:intergenic | 55.0% | |
| CTCCCACCTAGGTTTCTGTG+TGG | + | chr3_3:72801163-72801182 | Msa0470660:three_prime_UTR | 55.0% | |
| ! | GGGAGGAAGCCATGGTGGAA+TGG | - | chr3_3:72793441-72793460 | None:intergenic | 60.0% |
| TCCACCATGGCTTCCTCCCT+CGG | + | chr3_3:72793442-72793461 | Msa0470660:exon | 60.0% | |
| TGCACATCGCCATGCCCATG+AGG | - | chr3_3:72796301-72796320 | None:intergenic | 60.0% | |
| ACCAGGCTCACCCACTCAGA+TGG | + | chr3_3:72797095-72797114 | Msa0470660:CDS | 60.0% | |
| ACCATCTGAGTGGGTGAGCC+TGG | - | chr3_3:72797099-72797118 | None:intergenic | 60.0% | |
| ACCGGCTACTCCCCATTTCC+AGG | + | chr3_3:72797740-72797759 | Msa0470660:CDS | 60.0% | |
| AAGCCAACCCTGGCAGATGG+GGG | - | chr3_3:72798587-72798606 | None:intergenic | 60.0% | |
| GAAGCCAACCCTGGCAGATG+GGG | - | chr3_3:72798588-72798607 | None:intergenic | 60.0% | |
| GTGAAGCCAACCCTGGCAGA+TGG | - | chr3_3:72798590-72798609 | None:intergenic | 60.0% | |
| AGATGCCGTCGACGATGCAG+AGG | + | chr3_3:72800254-72800273 | Msa0470660:CDS | 60.0% | |
| ACAATGGCACCCTCCCACCT+AGG | + | chr3_3:72801152-72801171 | Msa0470660:three_prime_UTR | 60.0% | |
| !! | ATTAGCGGTGCCGTGCCGGT+CGG | - | chr3_3:72793324-72793343 | None:intergenic | 65.0% |
| CCACCTCTTCCGCGATTGGC+CGG | + | chr3_3:72793615-72793634 | Msa0470660:CDS | 65.0% | |
| TTCTCGTCGTCGTCGACGCC+GGG | - | chr3_3:72793643-72793662 | None:intergenic | 65.0% | |
| CTTCTCGTCGTCGTCGACGC+CGG | - | chr3_3:72793644-72793663 | None:intergenic | 65.0% | |
| GGCGGTCTTGGTGAGCGTCT+AGG | + | chr3_3:72794306-72794325 | Msa0470660:CDS | 65.0% | |
| ATCATCCTCCCTCCCAGCCG+TGG | + | chr3_3:72797806-72797825 | Msa0470660:intron | 65.0% | |
| GAATTCCACGGCTGGGAGGG+AGG | - | chr3_3:72797814-72797833 | None:intergenic | 65.0% | |
| TTGCCCCCATCTGCCAGGGT+TGG | + | chr3_3:72798581-72798600 | Msa0470660:CDS | 65.0% | |
| GCCGAGGGAGGAAGCCATGG+TGG | - | chr3_3:72793446-72793465 | None:intergenic | 70.0% | |
| GTCGCCGAGGGAGGAAGCCA+TGG | - | chr3_3:72793449-72793468 | None:intergenic | 70.0% | |
| CCGGCCAATCGCGGAAGAGG+TGG | - | chr3_3:72793618-72793637 | None:intergenic | 70.0% | |
| ! | GTGCCGGCCAATCGCGGAAG+AGG | - | chr3_3:72793621-72793640 | None:intergenic | 70.0% |
| ! | TTCCGCGATTGGCCGGCACC+CGG | + | chr3_3:72793622-72793641 | Msa0470660:CDS | 70.0% |
| TCGTCGTCGACGCCGGGTGC+CGG | - | chr3_3:72793637-72793656 | None:intergenic | 75.0% | |
| !!! | CGCCGGGTGCCGGCCAATCG+CGG | - | chr3_3:72793627-72793646 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 72793299 | 72801357 | 72793299 | ID=Msa0470660;Name=Msa0470660 |
| chr3_3 | mRNA | 72793299 | 72801357 | 72793299 | ID=Msa0470660-mRNA-1;Parent=Msa0470660;Name=Msa0470660-mRNA-1;_AED=0.12;_eAED=0.12;_QI=149|1|1|1|1|1|17|361|600 |
| chr3_3 | exon | 72793299 | 72793495 | 72793299 | ID=Msa0470660-mRNA-1:exon:18323;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72793577 | 72793681 | 72793577 | ID=Msa0470660-mRNA-1:exon:18324;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72793772 | 72793888 | 72793772 | ID=Msa0470660-mRNA-1:exon:18325;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72794204 | 72794344 | 72794204 | ID=Msa0470660-mRNA-1:exon:18326;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72795201 | 72795291 | 72795201 | ID=Msa0470660-mRNA-1:exon:18327;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72795892 | 72796019 | 72795892 | ID=Msa0470660-mRNA-1:exon:18328;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72796096 | 72796167 | 72796096 | ID=Msa0470660-mRNA-1:exon:18329;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72796292 | 72796356 | 72796292 | ID=Msa0470660-mRNA-1:exon:18330;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72796852 | 72796912 | 72796852 | ID=Msa0470660-mRNA-1:exon:18331;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72796999 | 72797116 | 72796999 | ID=Msa0470660-mRNA-1:exon:18332;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72797651 | 72797775 | 72797651 | ID=Msa0470660-mRNA-1:exon:18333;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72798089 | 72798165 | 72798089 | ID=Msa0470660-mRNA-1:exon:18334;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72798505 | 72798610 | 72798505 | ID=Msa0470660-mRNA-1:exon:18335;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72798787 | 72798846 | 72798787 | ID=Msa0470660-mRNA-1:exon:18336;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72799353 | 72799433 | 72799353 | ID=Msa0470660-mRNA-1:exon:18337;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72800036 | 72800275 | 72800036 | ID=Msa0470660-mRNA-1:exon:18338;Parent=Msa0470660-mRNA-1 |
| chr3_3 | exon | 72800829 | 72801357 | 72800829 | ID=Msa0470660-mRNA-1:exon:18339;Parent=Msa0470660-mRNA-1 |
| chr3_3 | five_prime_UTR | 72793299 | 72793447 | 72793299 | ID=Msa0470660-mRNA-1:five_prime_utr;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72793448 | 72793495 | 72793448 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72793577 | 72793681 | 72793577 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72793772 | 72793888 | 72793772 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72794204 | 72794344 | 72794204 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72795201 | 72795291 | 72795201 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72795892 | 72796019 | 72795892 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72796096 | 72796167 | 72796096 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72796292 | 72796356 | 72796292 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72796852 | 72796912 | 72796852 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72796999 | 72797116 | 72796999 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72797651 | 72797775 | 72797651 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72798089 | 72798165 | 72798089 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72798505 | 72798610 | 72798505 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72798787 | 72798846 | 72798787 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72799353 | 72799433 | 72799353 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72800036 | 72800275 | 72800036 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | CDS | 72800829 | 72800996 | 72800829 | ID=Msa0470660-mRNA-1:cds;Parent=Msa0470660-mRNA-1 |
| chr3_3 | three_prime_UTR | 72800997 | 72801357 | 72800997 | ID=Msa0470660-mRNA-1:three_prime_utr;Parent=Msa0470660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
