AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0479600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479600 MtrunA17_Chr3g0143261 83.951 486 43 10 1 475 1 462 0.0 708
Msa0479600 MtrunA17_Chr3g0143171 87.688 398 35 5 116 509 1 388 0.0 637
Msa0479600 MtrunA17_Chr1g0157011 41.818 550 238 17 1 495 1 523 2.55e-99 310
Msa0479600 MtrunA17_Chr5g0405961 35.000 400 187 19 96 462 80 439 5.54e-44 162
Msa0479600 MtrunA17_Chr8g0371401 30.682 440 201 18 96 488 61 443 6.66e-34 133
Msa0479600 MtrunA17_Chr5g0440821 37.821 156 82 2 360 500 288 443 6.31e-22 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479600 AT4G35890.1 29.769 477 236 22 20 460 37 450 1.72e-29 122
Msa0479600 AT5G66100.1 39.823 113 66 1 383 495 339 449 6.50e-23 102
Msa0479600 AT5G21160.1 38.710 124 70 2 355 472 248 371 5.19e-20 94.4
Msa0479600 AT5G21160.2 38.710 124 70 2 355 472 248 371 5.21e-20 94.4
Msa0479600 AT5G21160.3 38.710 124 70 2 355 472 248 371 5.22e-20 94.4
Msa0479600 AT4G35890.2 28.636 440 215 22 20 423 37 413 4.57e-17 84.0

Find 206 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACCCAATTCTGCTTATTT+AGG 0.088386 3_3:-84592427 Msa0479600:CDS
CACAGTCACAGGGGTAATTT+TGG 0.123601 3_3:-84592571 Msa0479600:CDS
AAATTTGCAATCAAAGAAAT+TGG 0.210385 3_3:+84591979 None:intergenic
ATGACCACCCGGATCAATTT+TGG 0.221787 3_3:-84588926 Msa0479600:three_prime_UTR
GATCCCTCCTAATACTTTCT+TGG 0.224561 3_3:-84592677 Msa0479600:CDS
GGTAGTAACCATTGCCAATT+AGG 0.231850 3_3:+84593664 None:intergenic
CTAGTGTTCATTGTATTTCC+TGG 0.241775 3_3:+84592505 None:intergenic
CTCTTCCTCCTCCAGATTTA+CGG 0.250125 3_3:+84593906 None:intergenic
TATAGAGAGCCGAGACTAAT+AGG 0.264170 3_3:+84589063 None:intergenic
AATTTGTTTGAGTATTATAC+TGG 0.264468 3_3:+84592161 None:intergenic
CATTCCCCTCCAATTTGATA+TGG 0.280736 3_3:-84593787 Msa0479600:five_prime_UTR
CACCGACCACGTAACAATTA+TGG 0.281055 3_3:-84592547 Msa0479600:CDS
TACCCAATTCTGCTTATTTA+GGG 0.284773 3_3:-84592426 Msa0479600:CDS
ATCAGTTGCCCCACCATTTC+CGG 0.285643 3_3:-84592707 Msa0479600:CDS
CTCTGAGTGCATCCTATGTT+GGG 0.291781 3_3:+84592468 None:intergenic
CAGAATCAGAAAACCCTAAT+TGG 0.301882 3_3:-84593678 Msa0479600:five_prime_UTR
AACAAATAGCCATATCAAAT+TGG 0.315123 3_3:+84593778 None:intergenic
TGAGGTGAGTTTGATGTAAC+AGG 0.317418 3_3:+84592934 None:intergenic
CCGTCAACCAAGAAAGTATT+AGG 0.317562 3_3:+84592670 None:intergenic
AGACCCTAAATAAGCAGAAT+TGG 0.323751 3_3:+84592423 None:intergenic
TGGTTCGGAGGAGGAGGAGG+AGG 0.337303 3_3:+84593541 None:intergenic
GAACCAACTTGTTGGTAAAC+AGG 0.337799 3_3:+84589220 None:intergenic
CTAAATCATGCAGGGTTTCA+TGG 0.339707 3_3:-84592382 Msa0479600:intron
TTTGAGTATTATACTGGGTG+GGG 0.349253 3_3:+84592167 None:intergenic
CATTCCGATGCTACCACAAA+TGG 0.361445 3_3:-84589109 Msa0479600:CDS
GAGTGGTTCGGAGGAGGAGG+AGG 0.364828 3_3:+84593538 None:intergenic
CCTAATACTTTCTTGGTTGA+CGG 0.366529 3_3:-84592670 Msa0479600:CDS
ATTCATCAAGTTATTTCAAT+TGG 0.366618 3_3:+84588742 None:intergenic
TCTCGGCTCTCTATACAGTT+AGG 0.376723 3_3:-84589055 Msa0479600:three_prime_UTR
GGGAAATTAGTGGTGGCGGC+AGG 0.376958 3_3:+84593617 None:intergenic
ACACTACAGTTTGAACCCTT+TGG 0.378283 3_3:-84592267 Msa0479600:CDS
AGTGGTGGCGGCAGGGTTAG+AGG 0.383996 3_3:+84593625 None:intergenic
AATGGATCAGGTTAGGATCT+TGG 0.393753 3_3:+84593811 None:intergenic
GGGGTCCAAGATCACCAGTT+GGG 0.394180 3_3:-84592618 Msa0479600:CDS
CTAATACTTTCTTGGTTGAC+GGG 0.396880 3_3:-84592669 Msa0479600:CDS
ACACAGTTAAATACTGTAAT+GGG 0.397833 3_3:+84588991 None:intergenic
CCTCTGAGTGCATCCTATGT+TGG 0.399395 3_3:+84592467 None:intergenic
GGGATCTGAAGCACCGGAAA+TGG 0.408585 3_3:+84592694 None:intergenic
CCTTGCTTCTCCGTGGGCCC+TGG 0.409410 3_3:-84593585 Msa0479600:CDS
TTTAACAAATAAGAATTTCA+AGG 0.420041 3_3:-84588879 Msa0479600:three_prime_UTR
CAAATTGGAGGGGAATGAAA+TGG 0.422079 3_3:+84593793 None:intergenic
GTAGTAACCATTGCCAATTA+GGG 0.425206 3_3:+84593665 None:intergenic
GACTACTACCAAAATTGATC+CGG 0.427783 3_3:+84588918 None:intergenic
TGAGAACCTAACCTGAGAAA+TGG 0.428381 3_3:+84593226 None:intergenic
GTTGAGTGGTTCGGAGGAGG+AGG 0.428714 3_3:+84593535 None:intergenic
TTGCCTCCTCCGCGCTTCAT+CGG 0.432848 3_3:+84592823 None:intergenic
TCTGGAGGAGGAAGAGGAAG+AGG 0.433181 3_3:-84593899 Msa0479600:five_prime_UTR
GTTAAATACTGTAATGGGTT+AGG 0.438615 3_3:+84588996 None:intergenic
CTTACAAGAACAATAATAGC+TGG 0.443932 3_3:-84592639 Msa0479600:CDS
GACTGCGGCGGAGGAGGTGG+TGG 0.445285 3_3:+84593503 None:intergenic
CGGATCAATCTCCATTTCTC+AGG 0.447884 3_3:-84593237 Msa0479600:intron
TTGAACTAGAACCAACTTGT+TGG 0.449234 3_3:+84589212 None:intergenic
ATTGAGAAATTCGTCGGTTG+TGG 0.449624 3_3:-84591369 Msa0479600:CDS
AACACAGTTAAATACTGTAA+TGG 0.449968 3_3:+84588990 None:intergenic
GGAATGAAATGGATCAGGTT+AGG 0.455219 3_3:+84593804 None:intergenic
ACAGACTGCGGCGGAGGAGG+TGG 0.456229 3_3:+84593500 None:intergenic
ATTCCGATGCTACCACAAAT+GGG 0.457299 3_3:-84589108 Msa0479600:CDS
GGAGGGGAATGAAATGGATC+AGG 0.458670 3_3:+84593799 None:intergenic
ACACTATGACTGTGATTCAT+TGG 0.461539 3_3:+84592862 None:intergenic
CAATGAATCTAGTATCAATT+CGG 0.464214 3_3:+84591388 None:intergenic
CTGTGACTGTGCTCATCTAC+AGG 0.466785 3_3:+84592583 None:intergenic
AGCAGTAGTGGCAGTGGCAG+TGG 0.467549 3_3:+84592903 None:intergenic
TGATTTAGAAACGGTCTCAT+AGG 0.468183 3_3:+84592397 None:intergenic
CCGTGGGCCCTGGTTGTTCG+CGG 0.468990 3_3:-84593575 Msa0479600:CDS
GAAGCTGATTAGAAATAGAA+AGG 0.471850 3_3:-84588832 Msa0479600:three_prime_UTR
AAACCGATGAAGCGCGGAGG+AGG 0.474151 3_3:-84592826 Msa0479600:CDS
TCATGCAGAGTCCCCATTTG+TGG 0.474937 3_3:+84589096 None:intergenic
ATGTAATGGGTGCTGTCTCT+TGG 0.477582 3_3:-84593313 Msa0479600:CDS
GACCCTAAATAAGCAGAATT+GGG 0.478332 3_3:+84592424 None:intergenic
GGGTCCAAGATCACCAGTTG+GGG 0.478469 3_3:-84592617 Msa0479600:CDS
GTTAATCTTATGATTAGCAT+TGG 0.478744 3_3:+84593412 None:intergenic
ATAGAGAGCCGAGACTAATA+GGG 0.483615 3_3:+84589064 None:intergenic
TGCTGAGGTCAGTCATGTAA+TGG 0.484210 3_3:-84593327 Msa0479600:CDS
CGTAAATCTGGAGGAGGAAG+AGG 0.485416 3_3:-84593905 Msa0479600:five_prime_UTR
CTCGGCTCTCTATACAGTTA+GGG 0.488398 3_3:-84589054 Msa0479600:three_prime_UTR
ATTGTTGAGTGGTTCGGAGG+AGG 0.489905 3_3:+84593532 None:intergenic
GTTTGAGTATTATACTGGGT+GGG 0.490191 3_3:+84592166 None:intergenic
GAAGAAACAGACTGCGGCGG+AGG 0.492755 3_3:+84593494 None:intergenic
TTGAGTATTATACTGGGTGG+GGG 0.493759 3_3:+84592168 None:intergenic
CTTATCAAAATCAGCAGCTA+TGG 0.495850 3_3:+84589162 None:intergenic
GACAACAGCAGCAACTAGAT+TGG 0.496260 3_3:+84593451 None:intergenic
GAAACAGACTGCGGCGGAGG+AGG 0.496713 3_3:+84593497 None:intergenic
ACATCTGCCGCCGATGGTGC+CGG 0.497940 3_3:-84593257 Msa0479600:CDS
CTGTAGATGAGCACAGTCAC+AGG 0.498458 3_3:-84592582 Msa0479600:CDS
CGAATCGATCGATCAGTGTA+TGG 0.498796 3_3:+84593740 None:intergenic
GGAGATTGATCCGGCACCAT+CGG 0.501503 3_3:+84593247 None:intergenic
ATCTGAAGCACCGGAAATGG+TGG 0.504368 3_3:+84592697 None:intergenic
CCGCGAACAACCAGGGCCCA+CGG 0.506974 3_3:+84593575 None:intergenic
TGGTTCTAGTTCAATATCCT+CGG 0.507096 3_3:-84589203 Msa0479600:CDS
CTACAGTTTGAACCCTTTGG+AGG 0.509856 3_3:-84592264 Msa0479600:CDS
GTTGATGATTAGCTTGAGGA+GGG 0.509914 3_3:+84592755 None:intergenic
ATGCTCATGCACCCCAACAT+AGG 0.513506 3_3:-84592480 Msa0479600:CDS
GAAGGCTTAGCAGACAAAGC+AGG 0.514228 3_3:+84593290 None:intergenic
GTGGCAGTGGCTTGTTTCTG+AGG 0.515416 3_3:+84592916 None:intergenic
TTACAAGAACAATAATAGCT+GGG 0.515629 3_3:-84592638 Msa0479600:CDS
GGCTCTGTGTTGTGTTGTTG+AGG 0.516893 3_3:-84593866 Msa0479600:five_prime_UTR
TCTAGTTCAATATCCTCGGT+TGG 0.517388 3_3:-84589199 Msa0479600:CDS
GGAAATTAGTGGTGGCGGCA+GGG 0.517875 3_3:+84593618 None:intergenic
GGCGATGTTCTTTCCAGTTG+CGG 0.519004 3_3:-84592211 Msa0479600:CDS
AGAATTTCAAGGAATTATGC+TGG 0.521491 3_3:-84588868 Msa0479600:three_prime_UTR
ACTAGGCGCAATCAAGATCC+AGG 0.521819 3_3:-84592523 Msa0479600:CDS
AAGGGTTCAAACTGTAGTGT+TGG 0.523768 3_3:+84592270 None:intergenic
GGGTTAGGTATCGTTGGTTG+AGG 0.523831 3_3:+84589011 None:intergenic
AGACCGTTTCTAAATCATGC+AGG 0.525522 3_3:-84592391 Msa0479600:CDS
CTGAGAAATGGAGATTGATC+CGG 0.525679 3_3:+84593238 None:intergenic
TCTGAAGCACCGGAAATGGT+GGG 0.527413 3_3:+84592698 None:intergenic
GCTGAGGTCAGTCATGTAAT+GGG 0.530024 3_3:-84593326 Msa0479600:CDS
GGAGGTGCATGGGTCAAGAA+TGG 0.530944 3_3:+84592237 None:intergenic
GAACATGGACGTACATGGTT+GGG 0.531456 3_3:-84592004 Msa0479600:CDS
CTTGACCCATGCACCTCCTC+CGG 0.533926 3_3:-84592232 Msa0479600:CDS
AGTCAGCACCGCGAACAACC+AGG 0.536237 3_3:+84593567 None:intergenic
CTCAGCAACAACGAGGCCAT+TGG 0.537095 3_3:+84593343 None:intergenic
TGTAATGGGTTAGGTATCGT+TGG 0.537508 3_3:+84589005 None:intergenic
CAAGAATGGCATACCTCCAA+AGG 0.537670 3_3:+84592251 None:intergenic
TTGGATGTGTTCTTCCAAGC+GGG 0.538830 3_3:+84593362 None:intergenic
TGCATTAGCAGTAGTGGCAG+TGG 0.538938 3_3:+84592897 None:intergenic
GGAAAGAACATCGCCGGAGG+AGG 0.542029 3_3:+84592219 None:intergenic
TAAGCAGAATTGGGTAGTGT+AGG 0.542293 3_3:+84592433 None:intergenic
AATAGCCATATCAAATTGGA+GGG 0.543805 3_3:+84593782 None:intergenic
AACAACAATAACAATAAGCC+TGG 0.545616 3_3:-84592802 Msa0479600:CDS
AAATAGCCATATCAAATTGG+AGG 0.551529 3_3:+84593781 None:intergenic
CATCGCCGGAGGAGGTGCAT+GGG 0.552718 3_3:+84592227 None:intergenic
TGCCATAATTGTTACGTGGT+CGG 0.554214 3_3:+84592545 None:intergenic
CAAATGATTGTTGAGTGGTT+CGG 0.554641 3_3:+84593526 None:intergenic
CAATGGCCTCGTTGTTGCTG+AGG 0.555953 3_3:-84593342 Msa0479600:CDS
ACATCGCCGGAGGAGGTGCA+TGG 0.556853 3_3:+84592226 None:intergenic
AACAGATACAGAAAGGATTG+AGG 0.557754 3_3:+84593711 None:intergenic
AGATTCATTGAGAAATTCGT+CGG 0.559155 3_3:-84591375 Msa0479600:CDS
AACCAACTTGTTGGTAAACA+GGG 0.560006 3_3:+84589221 None:intergenic
GTCCCCATTTGTGGTAGCAT+CGG 0.561148 3_3:+84589105 None:intergenic
CGAACATGGACGTACATGGT+TGG 0.562791 3_3:-84592005 Msa0479600:CDS
AAATTCACATCTGCCGCCGA+TGG 0.564017 3_3:-84593263 Msa0479600:CDS
AACCCTGCATGATTTAGAAA+CGG 0.566377 3_3:+84592388 None:intergenic
GGAAATGGTGGGGCAACTGA+TGG 0.566400 3_3:+84592709 None:intergenic
ATGTCTTGCATTAGCAGTAG+TGG 0.568855 3_3:+84592891 None:intergenic
CTATGACTGTGATTCATTGG+AGG 0.570095 3_3:+84592865 None:intergenic
GTCAGCACCGCGAACAACCA+GGG 0.571771 3_3:+84593568 None:intergenic
GAGGGCCGTAAATCTGGAGG+AGG 0.574148 3_3:-84593911 Msa0479600:five_prime_UTR
TGTTTGAGTATTATACTGGG+TGG 0.577057 3_3:+84592165 None:intergenic
GGTTGATGATTAGCTTGAGG+AGG 0.577308 3_3:+84592754 None:intergenic
GACCGTTTCTAAATCATGCA+GGG 0.578959 3_3:-84592390 Msa0479600:CDS
AAACTGTTTGACAAAGGACC+AGG 0.581251 3_3:+84592784 None:intergenic
AAGTCGAACATGGACGTACA+TGG 0.581879 3_3:-84592009 Msa0479600:CDS
TCGCGGGAAATTAGTGGTGG+CGG 0.582579 3_3:+84593613 None:intergenic
CAGAAAACCCTAATTGGCAA+TGG 0.583339 3_3:-84593672 Msa0479600:exon
TGAATTTCTGAAGTCGAACA+TGG 0.583831 3_3:-84592019 Msa0479600:CDS
GGTGGGGCAACTGATGGTAA+TGG 0.584121 3_3:+84592715 None:intergenic
AAATGAAAACAGATACAGAA+AGG 0.594842 3_3:+84593704 None:intergenic
CTCTCTATACAGTTAGGGAG+CGG 0.595911 3_3:-84589049 Msa0479600:three_prime_UTR
CGTCGTCGCCCTATTAGTCT+CGG 0.600443 3_3:-84589072 Msa0479600:three_prime_UTR
TCAATTCTTTCATGACCACC+CGG 0.602625 3_3:-84588937 Msa0479600:three_prime_UTR
ACTACTACCAAAATTGATCC+GGG 0.603641 3_3:+84588919 None:intergenic
CACGTAACAATTATGGCACT+AGG 0.604057 3_3:-84592540 Msa0479600:CDS
ACCAACTTGTTGGTAAACAG+GGG 0.605768 3_3:+84589222 None:intergenic
TTAGGAGGGATCTGAAGCAC+CGG 0.606069 3_3:+84592688 None:intergenic
TGTAGATGAGCACAGTCACA+GGG 0.606668 3_3:-84592581 Msa0479600:CDS
GGAAGCGTAATGAGTGGGAG+AGG 0.608852 3_3:-84589252 Msa0479600:CDS
AAGAATGGCATACCTCCAAA+GGG 0.609464 3_3:+84592252 None:intergenic
GGTTAGGATCTTGGTTGCAG+AGG 0.609531 3_3:+84593820 None:intergenic
TGGGGTCCAAGATCACCAGT+TGG 0.610994 3_3:-84592619 Msa0479600:CDS
ATGATTGTTGAGTGGTTCGG+AGG 0.611344 3_3:+84593529 None:intergenic
ATTTGTTTGAGTATTATACT+GGG 0.612856 3_3:+84592162 None:intergenic
TCAACCAAGAAAGTATTAGG+AGG 0.615240 3_3:+84592673 None:intergenic
TCAAGCTAATCATCAACCAT+CGG 0.617009 3_3:-84592749 Msa0479600:CDS
TTAGATAAACTGTTTGACAA+AGG 0.624128 3_3:+84592778 None:intergenic
GCAGATGTGAATTTAGCAGA+AGG 0.624192 3_3:+84593272 None:intergenic
GCAACTGGAAAGAACATCGC+CGG 0.624737 3_3:+84592213 None:intergenic
CAACATAGGATGCACTCAGA+GGG 0.624890 3_3:-84592466 Msa0479600:CDS
GATGGTTGATGATTAGCTTG+AGG 0.626712 3_3:+84592751 None:intergenic
TGCTACAGGGTGACAAACTG+AGG 0.627343 3_3:-84589273 Msa0479600:intron
GGGGCAACTGATGGTAATGG+TGG 0.628216 3_3:+84592718 None:intergenic
ACTGAGGAAGCGTAATGAGT+GGG 0.628512 3_3:-84589257 Msa0479600:CDS
GCTTGGAAGAACACATCCAA+TGG 0.629040 3_3:-84593359 Msa0479600:CDS
ATTGGATGTGTTCTTCCAAG+CGG 0.629682 3_3:+84593361 None:intergenic
AGAGGAAGAGGAAGAAACCA+TGG 0.631822 3_3:-84593887 Msa0479600:five_prime_UTR
AACTGAGGAAGCGTAATGAG+TGG 0.634339 3_3:-84589258 Msa0479600:CDS
GATTGATCCGGCACCATCGG+CGG 0.634534 3_3:+84593250 None:intergenic
CAACCAAGAAAGTATTAGGA+GGG 0.634635 3_3:+84592674 None:intergenic
AACAACACAACACAGAGCCA+TGG 0.640729 3_3:+84593870 None:intergenic
TTTGAGGGCCGTAAATCTGG+AGG 0.642558 3_3:-84593914 Msa0479600:five_prime_UTR
CCAGGGCCCACGGAGAAGCA+AGG 0.642878 3_3:+84593585 None:intergenic
TGAGGAGAGTGACAACAAGA+TGG 0.643648 3_3:-84593848 Msa0479600:five_prime_UTR
TACAAGAACAATAATAGCTG+GGG 0.644230 3_3:-84592637 Msa0479600:CDS
AGAGGAAGAATCAGATGCGG+TGG 0.644649 3_3:+84593643 None:intergenic
CTGAAGCACCGGAAATGGTG+GGG 0.644787 3_3:+84592699 None:intergenic
TCTGAGTGCATCCTATGTTG+GGG 0.651711 3_3:+84592469 None:intergenic
AATGAATCACAGTCATAGTG+TGG 0.656978 3_3:-84592860 Msa0479600:CDS
TTCCGATGCTACCACAAATG+GGG 0.657668 3_3:-84589107 Msa0479600:CDS
ATAGCCATATCAAATTGGAG+GGG 0.660946 3_3:+84593783 None:intergenic
TAATCATAAGATTAACAATG+TGG 0.661096 3_3:-84593405 Msa0479600:CDS
TAATACTTTCTTGGTTGACG+GGG 0.669269 3_3:-84592668 Msa0479600:CDS
ACTGGAAAGAACATCGCCGG+AGG 0.679526 3_3:+84592216 None:intergenic
CTAGTGCCATAATTGTTACG+TGG 0.680732 3_3:+84592541 None:intergenic
TGCACTCAGAGGGATTTCTG+AGG 0.680826 3_3:-84592456 Msa0479600:CDS
CCAACATAGGATGCACTCAG+AGG 0.684182 3_3:-84592467 Msa0479600:CDS
GGTGGCAAATGATTGTTGAG+TGG 0.684195 3_3:+84593521 None:intergenic
GATGAAGAAACAGACTGCGG+CGG 0.690295 3_3:+84593491 None:intergenic
AATGGTGGAGCAACAACCGA+TGG 0.696205 3_3:+84592733 None:intergenic
CCAACTTGTTGGTAAACAGG+GGG 0.710113 3_3:+84589223 None:intergenic
ACTGCAAGTTGAACCAACCG+AGG 0.723933 3_3:+84589186 None:intergenic
GACTGACCTCAGCAACAACG+AGG 0.728171 3_3:+84593336 None:intergenic
GTTAGAGGAAGAATCAGATG+CGG 0.735060 3_3:+84593640 None:intergenic
ACTACCAAAATTGATCCGGG+TGG 0.747270 3_3:+84588922 None:intergenic
GGTCCAAGATCACCAGTTGG+GGG 0.749871 3_3:-84592616 Msa0479600:CDS
GTAGATGAGCACAGTCACAG+GGG 0.763813 3_3:-84592580 Msa0479600:CDS
GATGATGAAGAAACAGACTG+CGG 0.774638 3_3:+84593488 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATAATTGATTTGTTTTT+TGG - chr3_3:84589542-84589561 Msa0479600:intron 10.0%
!!! AACAAATTGATTATTATTTT+AGG - chr3_3:84590514-84590533 Msa0479600:intron 10.0%
!!! TTTTAAATTTCATTTGAAAA+AGG - chr3_3:84592269-84592288 Msa0479600:CDS 10.0%
!! AAATGAACAAAAACATAATT+AGG + chr3_3:84589470-84589489 None:intergenic 15.0%
!!! AATAGAATTCTAAAAAGAAA+AGG + chr3_3:84590365-84590384 None:intergenic 15.0%
!! AAAATGTTATGTAAATACAA+GGG + chr3_3:84591434-84591453 None:intergenic 15.0%
!!! TTTACATAACATTTTGAAAT+TGG - chr3_3:84591439-84591458 Msa0479600:intron 15.0%
!!! TATCAAATATTTCTATTTGA+AGG - chr3_3:84591737-84591756 Msa0479600:intron 15.0%
!!! ATCAAATATTTCTATTTGAA+GGG - chr3_3:84591738-84591757 Msa0479600:intron 15.0%
!!! GTGTATATATATACATTTTT+AGG - chr3_3:84592486-84592505 Msa0479600:CDS 15.0%
!! TTTAACAAATAAGAATTTCA+AGG - chr3_3:84593781-84593800 Msa0479600:five_prime_UTR 15.0%
!! TAATCATAAGATTAACAATG+TGG - chr3_3:84589255-84589274 Msa0479600:CDS 20.0%
!!! TAATTGATTTGTTTTTTGGA+TGG - chr3_3:84589546-84589565 Msa0479600:intron 20.0%
!! TTGTGATTATCTTGAAAAAA+TGG - chr3_3:84589581-84589600 Msa0479600:intron 20.0%
!! ATTTGTTTGAGTATTATACT+GGG + chr3_3:84590501-84590520 None:intergenic 20.0%
!!! AATTTGTTTGAGTATTATAC+TGG + chr3_3:84590502-84590521 None:intergenic 20.0%
!!! TTTTGATAGTGATGTTAATT+TGG - chr3_3:84590611-84590630 Msa0479600:intron 20.0%
!! AAATTTGCAATCAAAGAAAT+TGG + chr3_3:84590684-84590703 None:intergenic 20.0%
!!! ATTGTTCTATTGTATTTTCT+AGG - chr3_3:84591332-84591351 Msa0479600:intron 20.0%
!! CAAAATGTTATGTAAATACA+AGG + chr3_3:84591435-84591454 None:intergenic 20.0%
!! AAATATTTGATAAGTTCTGT+TGG + chr3_3:84591729-84591748 None:intergenic 20.0%
!!! CTACTCACTTTTAATTTTTA+AGG - chr3_3:84591839-84591858 Msa0479600:intron 20.0%
!! ATCAAGAATTTCATTTGAAA+TGG - chr3_3:84592295-84592314 Msa0479600:intron 20.0%
!!! AAATATTTGTTTGGAATGTA+TGG + chr3_3:84592572-84592591 None:intergenic 20.0%
!! AAATCTAGCAAATATTTGTT+TGG + chr3_3:84592581-84592600 None:intergenic 20.0%
!!! ATTTCCAATATCTTCTTTTA+GGG - chr3_3:84592769-84592788 Msa0479600:CDS 20.0%
!!! TTTACTTAACCTTTTGAAAT+TGG + chr3_3:84593167-84593186 None:intergenic 20.0%
!! AAAAGGTTAAGTAAATACAA+GGG - chr3_3:84593172-84593191 Msa0479600:intron 20.0%
!! AATAGGCTTAAATATGTAAA+AGG + chr3_3:84593258-84593277 None:intergenic 20.0%
!!! GTGTTAGTCTTAATTTTAAA+AGG - chr3_3:84593688-84593707 Msa0479600:five_prime_UTR 20.0%
!!! GGAAAAATTTAGAATTTTGA+CGG - chr3_3:84593849-84593868 Msa0479600:five_prime_UTR 20.0%
! AACAAATAGCCATATCAAAT+TGG + chr3_3:84588885-84588904 None:intergenic 25.0%
! AAATGAAAACAGATACAGAA+AGG + chr3_3:84588959-84588978 None:intergenic 25.0%
! GTTAATCTTATGATTAGCAT+TGG + chr3_3:84589251-84589270 None:intergenic 25.0%
! TGAACAAAAACATAATTAGG+AGG + chr3_3:84589467-84589486 None:intergenic 25.0%
! TGATTATCTTGAAAAAATGG+TGG - chr3_3:84589584-84589603 Msa0479600:intron 25.0%
! ATGACATTAGAACTAATCTA+TGG - chr3_3:84589612-84589631 Msa0479600:intron 25.0%
! ATCTATGGAATAATAATGAG+AGG - chr3_3:84589627-84589646 Msa0479600:intron 25.0%
!!! TAATAATGAGAGGTGTTTAT+AGG - chr3_3:84589637-84589656 Msa0479600:intron 25.0%
!!! TTTTCGCTGTTATTTTTGTA+GGG - chr3_3:84589702-84589721 Msa0479600:intron 25.0%
! TTAGATAAACTGTTTGACAA+AGG + chr3_3:84589885-84589904 None:intergenic 25.0%
! TTACAAGAACAATAATAGCT+GGG - chr3_3:84590022-84590041 Msa0479600:intron 25.0%
! GTAAGTTAATTGTAGTTCTT+TGG - chr3_3:84590711-84590730 Msa0479600:intron 25.0%
! ATCATACATGTATACTATGT+CGG - chr3_3:84590748-84590767 Msa0479600:intron 25.0%
!! TTTCATGATTGCGTAATTTT+AGG - chr3_3:84590829-84590848 Msa0479600:intron 25.0%
! AAAAATCTACCAAAAGCAAA+TGG + chr3_3:84590865-84590884 None:intergenic 25.0%
! CAATGAATCTAGTATCAATT+CGG + chr3_3:84591275-84591294 None:intergenic 25.0%
! TCTAGGCTTAAATAAGTAAA+AGG - chr3_3:84591349-84591368 Msa0479600:intron 25.0%
! CAAAAACGCATATTTACATA+GGG - chr3_3:84591542-84591561 Msa0479600:intron 25.0%
! TCGTAAAATAAGTTATGAGA+GGG + chr3_3:84591673-84591692 None:intergenic 25.0%
! TTCGTAAAATAAGTTATGAG+AGG + chr3_3:84591674-84591693 None:intergenic 25.0%
!!! TGGCTTGTTTTAATTATTGA+GGG + chr3_3:84592120-84592139 None:intergenic 25.0%
! ATTATACTTAGTAGAACGTA+GGG + chr3_3:84592215-84592234 None:intergenic 25.0%
! CTACTAAGTATAATCTTCAA+TGG - chr3_3:84592221-84592240 Msa0479600:CDS 25.0%
! AATCTTCAATGGATCATTAA+TGG - chr3_3:84592232-84592251 Msa0479600:CDS 25.0%
! ATAATCACTTACAAAAGTTG+AGG + chr3_3:84592324-84592343 None:intergenic 25.0%
! TTTGTAAGTGATTATTGTGT+TGG - chr3_3:84592329-84592348 Msa0479600:intron 25.0%
! TAGATTTAATAGTGAAGAAC+AGG - chr3_3:84592594-84592613 Msa0479600:CDS 25.0%
!!! GCATATGTTTGATTTTCTTT+TGG + chr3_3:84592669-84592688 None:intergenic 25.0%
!! CATTTCCAATATCTTCTTTT+AGG - chr3_3:84592768-84592787 Msa0479600:CDS 25.0%
!!! ATTTTTTTGCAACCACATAT+TGG - chr3_3:84592825-84592844 Msa0479600:CDS 25.0%
!!! AATTGATGATGATTGACAAA+TGG - chr3_3:84592854-84592873 Msa0479600:CDS 25.0%
! AAGACATTGTTTAAGGAAAT+GGG - chr3_3:84592883-84592902 Msa0479600:CDS 25.0%
!! TCTATGTAAATATGCGTTTT+TGG - chr3_3:84593043-84593062 Msa0479600:intron 25.0%
! CAAAAGGTTAAGTAAATACA+AGG - chr3_3:84593171-84593190 Msa0479600:intron 25.0%
!! TTAAGCCTATTTTCTATTTG+TGG - chr3_3:84593267-84593286 Msa0479600:CDS 25.0%
! ACACAGTTAAATACTGTAAT+GGG + chr3_3:84593672-84593691 None:intergenic 25.0%
! AACACAGTTAAATACTGTAA+TGG + chr3_3:84593673-84593692 None:intergenic 25.0%
AATAGCCATATCAAATTGGA+GGG + chr3_3:84588881-84588900 None:intergenic 30.0%
AAATAGCCATATCAAATTGG+AGG + chr3_3:84588882-84588901 None:intergenic 30.0%
!!! GTTTTCGCTGTTATTTTTGT+AGG - chr3_3:84589701-84589720 Msa0479600:intron 30.0%
!!! TTTCGCTGTTATTTTTGTAG+GGG - chr3_3:84589703-84589722 Msa0479600:intron 30.0%
AACAACAATAACAATAAGCC+TGG - chr3_3:84589858-84589877 Msa0479600:intron 30.0%
CTTACAAGAACAATAATAGC+TGG - chr3_3:84590021-84590040 Msa0479600:intron 30.0%
TACAAGAACAATAATAGCTG+GGG - chr3_3:84590023-84590042 Msa0479600:intron 30.0%
TACCCAATTCTGCTTATTTA+GGG - chr3_3:84590234-84590253 Msa0479600:intron 30.0%
ACACATTACTATTTCAAGAC+AGG + chr3_3:84590560-84590579 None:intergenic 30.0%
TGTCTTGAAATAGTAATGTG+TGG - chr3_3:84590559-84590578 Msa0479600:intron 30.0%
GTCTTGAAATAGTAATGTGT+GGG - chr3_3:84590560-84590579 Msa0479600:intron 30.0%
AACTACAATTAACTTACTCG+CGG + chr3_3:84590708-84590727 None:intergenic 30.0%
TACGCAATCATGAAATCAAA+AGG + chr3_3:84590824-84590843 None:intergenic 30.0%
! TTCTCAAGTAAGTTGCTTTA+TGG + chr3_3:84590949-84590968 None:intergenic 30.0%
GAAATACTATCACCTAACAA+AGG - chr3_3:84590987-84591006 Msa0479600:intron 30.0%
! TTTTCTTCAACTCCTTTGTT+AGG + chr3_3:84591002-84591021 None:intergenic 30.0%
AGATTCATTGAGAAATTCGT+CGG - chr3_3:84591285-84591304 Msa0479600:intron 30.0%
TCGCAACAAAAAAAGATACA+GGG + chr3_3:84593200-84593219 None:intergenic 30.0%
TTCGCAACAAAAAAAGATAC+AGG + chr3_3:84593199-84593218 None:intergenic 30.0%
! CCTATGTAAATATGCGTTTT+TGG + chr3_3:84591544-84591563 None:intergenic 30.0%
CCAAAAACGCATATTTACAT+AGG - chr3_3:84591541-84591560 Msa0479600:intron 30.0%
AAAATAAGTTATGAGAGGGT+GGG + chr3_3:84591669-84591688 None:intergenic 30.0%
TAAAATAAGTTATGAGAGGG+TGG + chr3_3:84591670-84591689 None:intergenic 30.0%
AATTGCAACAGCAAATCAAA+GGG + chr3_3:84592043-84592062 None:intergenic 30.0%
AAATTGCAACAGCAAATCAA+AGG + chr3_3:84592044-84592063 None:intergenic 30.0%
!!! GTGGCTTGTTTTAATTATTG+AGG + chr3_3:84592121-84592140 None:intergenic 30.0%
TATAATTGTTCATGTTTGGG+TGG + chr3_3:84592140-84592159 None:intergenic 30.0%
ACCCAAACATGAACAATTAT+AGG - chr3_3:84592139-84592158 Msa0479600:intron 30.0%
CCCTATAATTGTTCATGTTT+GGG + chr3_3:84592143-84592162 None:intergenic 30.0%
CCCAAACATGAACAATTATA+GGG - chr3_3:84592140-84592159 Msa0479600:intron 30.0%
TCCCTATAATTGTTCATGTT+TGG + chr3_3:84592144-84592163 None:intergenic 30.0%
GATTATACTTAGTAGAACGT+AGG + chr3_3:84592216-84592235 None:intergenic 30.0%
!! TGGATTAGTTTAGAGAGAAA+AGG - chr3_3:84592349-84592368 Msa0479600:intron 30.0%
ATTTAATAGTGAAGAACAGG+CGG - chr3_3:84592597-84592616 Msa0479600:CDS 30.0%
TAACAACACACTCATCATAA+AGG - chr3_3:84592740-84592759 Msa0479600:CDS 30.0%
ACAACCCTAAAAGAAGATAT+TGG + chr3_3:84592776-84592795 None:intergenic 30.0%
GTGGTTGCAAAAAAATTATG+AGG + chr3_3:84592821-84592840 None:intergenic 30.0%
GAATGAGAAGACATTGTTTA+AGG - chr3_3:84592876-84592895 Msa0479600:CDS 30.0%
GAAGACATTGTTTAAGGAAA+TGG - chr3_3:84592882-84592901 Msa0479600:CDS 30.0%
!! TGTTTAAGGAAATGGGTTTT+TGG - chr3_3:84592890-84592909 Msa0479600:CDS 30.0%
TTCGCAACAAAAAAAGATAC+AGG - chr3_3:84593199-84593218 Msa0479600:intron 30.0%
TCGCAACAAAAAAAGATACA+GGG - chr3_3:84593200-84593219 Msa0479600:intron 30.0%
TTCCACCACAAATAGAAAAT+AGG + chr3_3:84593275-84593294 None:intergenic 30.0%
AATATTCTGAACTTTGCTAC+AGG - chr3_3:84593373-84593392 Msa0479600:CDS 30.0%
ATATTCTGAACTTTGCTACA+GGG - chr3_3:84593374-84593393 Msa0479600:CDS 30.0%
!! GTTAAATACTGTAATGGGTT+AGG + chr3_3:84593667-84593686 None:intergenic 30.0%
AGAATTTCAAGGAATTATGC+TGG - chr3_3:84593792-84593811 Msa0479600:five_prime_UTR 30.0%
GAAGCTGATTAGAAATAGAA+AGG - chr3_3:84593828-84593847 Msa0479600:five_prime_UTR 30.0%
ATAGCCATATCAAATTGGAG+GGG + chr3_3:84588880-84588899 None:intergenic 35.0%
AACAGATACAGAAAGGATTG+AGG + chr3_3:84588952-84588971 None:intergenic 35.0%
CAGAATCAGAAAACCCTAAT+TGG - chr3_3:84588982-84589001 Msa0479600:three_prime_UTR 35.0%
GTAGTAACCATTGCCAATTA+GGG + chr3_3:84588998-84589017 None:intergenic 35.0%
CAAATGATTGTTGAGTGGTT+CGG + chr3_3:84589137-84589156 None:intergenic 35.0%
ACACTATGACTGTGATTCAT+TGG + chr3_3:84589801-84589820 None:intergenic 35.0%
AATGAATCACAGTCATAGTG+TGG - chr3_3:84589800-84589819 Msa0479600:intron 35.0%
TCAAGCTAATCATCAACCAT+CGG - chr3_3:84589911-84589930 Msa0479600:intron 35.0%
!! CAACCAAGAAAGTATTAGGA+GGG + chr3_3:84589989-84590008 None:intergenic 35.0%
!! TCAACCAAGAAAGTATTAGG+AGG + chr3_3:84589990-84590009 None:intergenic 35.0%
CCTAATACTTTCTTGGTTGA+CGG - chr3_3:84589990-84590009 Msa0479600:intron 35.0%
CTAATACTTTCTTGGTTGAC+GGG - chr3_3:84589991-84590010 Msa0479600:intron 35.0%
TAATACTTTCTTGGTTGACG+GGG - chr3_3:84589992-84590011 Msa0479600:intron 35.0%
CTAGTGTTCATTGTATTTCC+TGG + chr3_3:84590158-84590177 None:intergenic 35.0%
CTACCCAATTCTGCTTATTT+AGG - chr3_3:84590233-84590252 Msa0479600:intron 35.0%
GACCCTAAATAAGCAGAATT+GGG + chr3_3:84590239-84590258 None:intergenic 35.0%
AGACCCTAAATAAGCAGAAT+TGG + chr3_3:84590240-84590259 None:intergenic 35.0%
TGATTTAGAAACGGTCTCAT+AGG + chr3_3:84590266-84590285 None:intergenic 35.0%
AACCCTGCATGATTTAGAAA+CGG + chr3_3:84590275-84590294 None:intergenic 35.0%
! AAAGCATTAGTTGTGTCTTG+TGG + chr3_3:84590340-84590359 None:intergenic 35.0%
TTTGAGTATTATACTGGGTG+GGG + chr3_3:84590496-84590515 None:intergenic 35.0%
GTTTGAGTATTATACTGGGT+GGG + chr3_3:84590497-84590516 None:intergenic 35.0%
TGTTTGAGTATTATACTGGG+TGG + chr3_3:84590498-84590517 None:intergenic 35.0%
!! TGAATTTCTGAAGTCGAACA+TGG - chr3_3:84590641-84590660 Msa0479600:intron 35.0%
ACTACAATTAACTTACTCGC+GGG + chr3_3:84590707-84590726 None:intergenic 35.0%
TTGTACTACCAAGTGCAAAT+AGG - chr3_3:84591125-84591144 Msa0479600:intron 35.0%
CTTGAAAACCTATTTGCACT+TGG + chr3_3:84591136-84591155 None:intergenic 35.0%
! ATACATGTCACTTGATGAGT+TGG - chr3_3:84591493-84591512 Msa0479600:intron 35.0%
TCTATTTGAAGGGTCTTCAA+AGG - chr3_3:84591748-84591767 Msa0479600:intron 35.0%
TTCTAACTGCAGTTCTTGTA+TGG - chr3_3:84591807-84591826 Msa0479600:intron 35.0%
AGTAGAACGTAGGGTAAATT+CGG + chr3_3:84592206-84592225 None:intergenic 35.0%
GGATCATTAATGGCTAAAGA+TGG - chr3_3:84592242-84592261 Msa0479600:CDS 35.0%
AGAGGTTGGAAGAGAAAAAT+AGG - chr3_3:84592386-84592405 Msa0479600:CDS 35.0%
TTTAATAGTGAAGAACAGGC+GGG - chr3_3:84592598-84592617 Msa0479600:CDS 35.0%
ATATGCAGCTATAACATGTG+CGG - chr3_3:84592631-84592650 Msa0479600:CDS 35.0%
AACACACTCATCATAAAGGT+TGG - chr3_3:84592744-84592763 Msa0479600:CDS 35.0%
! TTTAGGGTTGTCATGTGAAT+TGG - chr3_3:84592785-84592804 Msa0479600:CDS 35.0%
! TCAATTGAGTTGCCAATATG+TGG + chr3_3:84592840-84592859 None:intergenic 35.0%
!!! GAAATGGGTTTTTGGTGTTA+GGG - chr3_3:84592898-84592917 Msa0479600:CDS 35.0%
! AGCCTATTTTCTATTTGTGG+TGG - chr3_3:84593270-84593289 Msa0479600:CDS 35.0%
! TCTATTTGTGGTGGAAGTAT+AGG - chr3_3:84593279-84593298 Msa0479600:CDS 35.0%
!! AACCAACTTGTTGGTAAACA+GGG + chr3_3:84593442-84593461 None:intergenic 35.0%
TTGAACTAGAACCAACTTGT+TGG + chr3_3:84593451-84593470 None:intergenic 35.0%
!! TGGTTCTAGTTCAATATCCT+CGG - chr3_3:84593457-84593476 Msa0479600:CDS 35.0%
CTTATCAAAATCAGCAGCTA+TGG + chr3_3:84593501-84593520 None:intergenic 35.0%
ACTACTACCAAAATTGATCC+GGG + chr3_3:84593744-84593763 None:intergenic 35.0%
GACTACTACCAAAATTGATC+CGG + chr3_3:84593745-84593764 None:intergenic 35.0%
AATGGATCAGGTTAGGATCT+TGG + chr3_3:84588852-84588871 None:intergenic 40.0%
GGAATGAAATGGATCAGGTT+AGG + chr3_3:84588859-84588878 None:intergenic 40.0%
CAAATTGGAGGGGAATGAAA+TGG + chr3_3:84588870-84588889 None:intergenic 40.0%
CATTCCCCTCCAATTTGATA+TGG - chr3_3:84588873-84588892 Msa0479600:three_prime_UTR 40.0%
CAGAAAACCCTAATTGGCAA+TGG - chr3_3:84588988-84589007 Msa0479600:three_prime_UTR 40.0%
GGTAGTAACCATTGCCAATT+AGG + chr3_3:84588999-84589018 None:intergenic 40.0%
GTTAGAGGAAGAATCAGATG+CGG + chr3_3:84589023-84589042 None:intergenic 40.0%
!!! GTTTTTTCGCGGGAAATTAG+TGG + chr3_3:84589056-84589075 None:intergenic 40.0%
AAAAAACCTTGCTTCTCCGT+GGG - chr3_3:84589069-84589088 Msa0479600:three_prime_UTR 40.0%
GATGATGAAGAAACAGACTG+CGG + chr3_3:84589175-84589194 None:intergenic 40.0%
!!! TCTTCCAAGCGGGTTTTTTA+GGG + chr3_3:84589291-84589310 None:intergenic 40.0%
!!! TTCTTCCAAGCGGGTTTTTT+AGG + chr3_3:84589292-84589311 None:intergenic 40.0%
ATTGGATGTGTTCTTCCAAG+CGG + chr3_3:84589302-84589321 None:intergenic 40.0%
GCAGATGTGAATTTAGCAGA+AGG + chr3_3:84589391-84589410 None:intergenic 40.0%
CTGAGAAATGGAGATTGATC+CGG + chr3_3:84589425-84589444 None:intergenic 40.0%
CAATCTCCATTTCTCAGGTT+AGG - chr3_3:84589428-84589447 Msa0479600:intron 40.0%
TGAGAACCTAACCTGAGAAA+TGG + chr3_3:84589437-84589456 None:intergenic 40.0%
CTCAGGTTAGGTTCTCATAA+CGG - chr3_3:84589440-84589459 Msa0479600:intron 40.0%
TGAGGTGAGTTTGATGTAAC+AGG + chr3_3:84589729-84589748 None:intergenic 40.0%
ATGTCTTGCATTAGCAGTAG+TGG + chr3_3:84589772-84589791 None:intergenic 40.0%
CTATGACTGTGATTCATTGG+AGG + chr3_3:84589798-84589817 None:intergenic 40.0%
AAACTGTTTGACAAAGGACC+AGG + chr3_3:84589879-84589898 None:intergenic 40.0%
!! GTTGATGATTAGCTTGAGGA+GGG + chr3_3:84589908-84589927 None:intergenic 40.0%
!! GATGGTTGATGATTAGCTTG+AGG + chr3_3:84589912-84589931 None:intergenic 40.0%
GATCCCTCCTAATACTTTCT+TGG - chr3_3:84589983-84590002 Msa0479600:intron 40.0%
!! CCGTCAACCAAGAAAGTATT+AGG + chr3_3:84589993-84590012 None:intergenic 40.0%
! ACAGTCACAGGGGTAATTTT+GGG - chr3_3:84590090-84590109 Msa0479600:intron 40.0%
TGCCATAATTGTTACGTGGT+CGG + chr3_3:84590118-84590137 None:intergenic 40.0%
CTAGTGCCATAATTGTTACG+TGG + chr3_3:84590122-84590141 None:intergenic 40.0%
CACGTAACAATTATGGCACT+AGG - chr3_3:84590120-84590139 Msa0479600:intron 40.0%
TAAGCAGAATTGGGTAGTGT+AGG + chr3_3:84590230-84590249 None:intergenic 40.0%
AGACCGTTTCTAAATCATGC+AGG - chr3_3:84590269-84590288 Msa0479600:intron 40.0%
GACCGTTTCTAAATCATGCA+GGG - chr3_3:84590270-84590289 Msa0479600:intron 40.0%
CTAAATCATGCAGGGTTTCA+TGG - chr3_3:84590278-84590297 Msa0479600:intron 40.0%
AAGGGTTCAAACTGTAGTGT+TGG + chr3_3:84590393-84590412 None:intergenic 40.0%
ACACTACAGTTTGAACCCTT+TGG - chr3_3:84590393-84590412 Msa0479600:intron 40.0%
AAGAATGGCATACCTCCAAA+GGG + chr3_3:84590411-84590430 None:intergenic 40.0%
TTGAGTATTATACTGGGTGG+GGG + chr3_3:84590495-84590514 None:intergenic 40.0%
ATTTCAAGACAGGCTAAGTG+AGG + chr3_3:84590550-84590569 None:intergenic 40.0%
TGTAGTTCTTTGGTGAGCTT+TGG - chr3_3:84590721-84590740 Msa0479600:intron 40.0%
CAAAAGCAAATGGCTAGTGA+AGG + chr3_3:84590855-84590874 None:intergenic 40.0%
! CTTCACTAGCCATTTGCTTT+TGG - chr3_3:84590853-84590872 Msa0479600:intron 40.0%
! ATTGAGAAATTCGTCGGTTG+TGG - chr3_3:84591291-84591310 Msa0479600:intron 40.0%
! CAAAAAAGCGCGAACTTACA+GGG + chr3_3:84591376-84591395 None:intergenic 40.0%
! ACAAAAAAGCGCGAACTTAC+AGG + chr3_3:84591377-84591396 None:intergenic 40.0%
AAAGATCAGAGTGAGGAAGA+AGG + chr3_3:84591623-84591642 None:intergenic 40.0%
AAGAGAGAAAGATCAGAGTG+AGG + chr3_3:84591630-84591649 None:intergenic 40.0%
TTGCACGAAAACCAACTAAC+AGG - chr3_3:84591928-84591947 Msa0479600:intron 40.0%
TGCACGAAAACCAACTAACA+GGG - chr3_3:84591929-84591948 Msa0479600:intron 40.0%
CTCTGACAAATCATACCCAA+TGG - chr3_3:84591952-84591971 Msa0479600:intron 40.0%
CAAATCATACCCAATGGCAA+TGG - chr3_3:84591958-84591977 Msa0479600:intron 40.0%
! AGCTGCTTTGTGACTATTTG+AGG - chr3_3:84592445-84592464 Msa0479600:CDS 40.0%
TTAATAGTGAAGAACAGGCG+GGG - chr3_3:84592599-84592618 Msa0479600:CDS 40.0%
!!! GGAAATGGGTTTTTGGTGTT+AGG - chr3_3:84592897-84592916 Msa0479600:CDS 40.0%
TATGAGAGGGTGAGTATGAA+AGG - chr3_3:84592928-84592947 Msa0479600:CDS 40.0%
AAGAGAGAAAGAACAGAGTG+AGG - chr3_3:84592958-84592977 Msa0479600:intron 40.0%
AAAGAACAGAGTGAGGAAGA+AGG - chr3_3:84592965-84592984 Msa0479600:intron 40.0%
GTTGGCAATTGGTTAGTAGA+GGG + chr3_3:84593076-84593095 None:intergenic 40.0%
AGTTGGCAATTGGTTAGTAG+AGG + chr3_3:84593077-84593096 None:intergenic 40.0%
ATATGTGGCACTTGATGAGT+TGG + chr3_3:84593094-84593113 None:intergenic 40.0%
!!! GTGCGTTTTTTTGACGGAAA+CGG - chr3_3:84593131-84593150 Msa0479600:intron 40.0%
!!! GTTTTTTTGACGGAAACGGA+CGG - chr3_3:84593135-84593154 Msa0479600:intron 40.0%
!! ACCAACTTGTTGGTAAACAG+GGG + chr3_3:84593441-84593460 None:intergenic 40.0%
!! GAACCAACTTGTTGGTAAAC+AGG + chr3_3:84593443-84593462 None:intergenic 40.0%
! TCTAGTTCAATATCCTCGGT+TGG - chr3_3:84593461-84593480 Msa0479600:CDS 40.0%
ATTCCGATGCTACCACAAAT+GGG - chr3_3:84593552-84593571 Msa0479600:CDS 40.0%
ATAGAGAGCCGAGACTAATA+GGG + chr3_3:84593599-84593618 None:intergenic 40.0%
TATAGAGAGCCGAGACTAAT+AGG + chr3_3:84593600-84593619 None:intergenic 40.0%
!! TGTAATGGGTTAGGTATCGT+TGG + chr3_3:84593658-84593677 None:intergenic 40.0%
TCAATTCTTTCATGACCACC+CGG - chr3_3:84593723-84593742 Msa0479600:five_prime_UTR 40.0%
!! TTGACGGATGCAGATCTTTT+TGG - chr3_3:84593865-84593884 Msa0479600:five_prime_UTR 40.0%
CTCTTCCTCCTCCAGATTTA+CGG + chr3_3:84588757-84588776 None:intergenic 45.0%
AGAGGAAGAGGAAGAAACCA+TGG - chr3_3:84588773-84588792 Msa0479600:three_prime_UTR 45.0%
AACAACACAACACAGAGCCA+TGG + chr3_3:84588793-84588812 None:intergenic 45.0%
TGAGGAGAGTGACAACAAGA+TGG - chr3_3:84588812-84588831 Msa0479600:three_prime_UTR 45.0%
CGAATCGATCGATCAGTGTA+TGG + chr3_3:84588923-84588942 None:intergenic 45.0%
! TTTTCGCGGGAAATTAGTGG+TGG + chr3_3:84589053-84589072 None:intergenic 45.0%
!!! GAGAAGCAAGGTTTTTTCGC+GGG + chr3_3:84589066-84589085 None:intergenic 45.0%
!!! GGAGAAGCAAGGTTTTTTCG+CGG + chr3_3:84589067-84589086 None:intergenic 45.0%
GAAAAAACCTTGCTTCTCCG+TGG - chr3_3:84589068-84589087 Msa0479600:three_prime_UTR 45.0%
! ATGATTGTTGAGTGGTTCGG+AGG + chr3_3:84589134-84589153 None:intergenic 45.0%
GGTGGCAAATGATTGTTGAG+TGG + chr3_3:84589142-84589161 None:intergenic 45.0%
GACAACAGCAGCAACTAGAT+TGG + chr3_3:84589212-84589231 None:intergenic 45.0%
CTAACCCTAAAAAACCCGCT+TGG - chr3_3:84589284-84589303 Msa0479600:intron 45.0%
TTGGATGTGTTCTTCCAAGC+GGG + chr3_3:84589301-84589320 None:intergenic 45.0%
GCTTGGAAGAACACATCCAA+TGG - chr3_3:84589301-84589320 Msa0479600:intron 45.0%
TGCTGAGGTCAGTCATGTAA+TGG - chr3_3:84589333-84589352 Msa0479600:intron 45.0%
GCTGAGGTCAGTCATGTAAT+GGG - chr3_3:84589334-84589353 Msa0479600:intron 45.0%
!! ATGTAATGGGTGCTGTCTCT+TGG - chr3_3:84589347-84589366 Msa0479600:intron 45.0%
CGGATCAATCTCCATTTCTC+AGG - chr3_3:84589423-84589442 Msa0479600:intron 45.0%
AGACAAAAACCGATGAAGCG+CGG - chr3_3:84589828-84589847 Msa0479600:intron 45.0%
!! GGTTGATGATTAGCTTGAGG+AGG + chr3_3:84589909-84589928 None:intergenic 45.0%
TGTAGATGAGCACAGTCACA+GGG - chr3_3:84590079-84590098 Msa0479600:intron 45.0%
! CACAGTCACAGGGGTAATTT+TGG - chr3_3:84590089-84590108 Msa0479600:intron 45.0%
CACCGACCACGTAACAATTA+TGG - chr3_3:84590113-84590132 Msa0479600:intron 45.0%
TCTGAGTGCATCCTATGTTG+GGG + chr3_3:84590194-84590213 None:intergenic 45.0%
CTCTGAGTGCATCCTATGTT+GGG + chr3_3:84590195-84590214 None:intergenic 45.0%
CAACATAGGATGCACTCAGA+GGG - chr3_3:84590194-84590213 Msa0479600:intron 45.0%
GCATTAGTTGTGTCTTGTGG+TGG + chr3_3:84590337-84590356 None:intergenic 45.0%
CTACAGTTTGAACCCTTTGG+AGG - chr3_3:84590396-84590415 Msa0479600:intron 45.0%
CAAGAATGGCATACCTCCAA+AGG + chr3_3:84590412-84590431 None:intergenic 45.0%
AAGTCGAACATGGACGTACA+TGG - chr3_3:84590651-84590670 Msa0479600:intron 45.0%
GAACATGGACGTACATGGTT+GGG - chr3_3:84590656-84590675 Msa0479600:intron 45.0%
! TCACTTGATGAGTTGGCAAC+TGG - chr3_3:84591500-84591519 Msa0479600:intron 45.0%
AGTTGGCAACTGGTTAGTAG+AGG - chr3_3:84591510-84591529 Msa0479600:intron 45.0%
GTTGGCAACTGGTTAGTAGA+GGG - chr3_3:84591511-84591530 Msa0479600:intron 45.0%
AAGTTATGAGAGGGTGGGTA+TGG + chr3_3:84591664-84591683 None:intergenic 45.0%
TTTGTCAGAGCCCTGTTAGT+TGG + chr3_3:84591942-84591961 None:intergenic 45.0%
TTTCCTTGGCCATTGCCATT+GGG + chr3_3:84591970-84591989 None:intergenic 45.0%
ATTTCCTTGGCCATTGCCAT+TGG + chr3_3:84591971-84591990 None:intergenic 45.0%
AATGGCAATGGCCAAGGAAA+TGG - chr3_3:84591970-84591989 Msa0479600:intron 45.0%
AGAAGTCCAGACCATTTCCT+TGG + chr3_3:84591984-84592003 None:intergenic 45.0%
AAGGAAATGGTCTGGACTTC+TGG - chr3_3:84591983-84592002 Msa0479600:CDS 45.0%
GGGTAAATTCGGTAAGTGGA+TGG + chr3_3:84592195-84592214 None:intergenic 45.0%
CGTAGGGTAAATTCGGTAAG+TGG + chr3_3:84592199-84592218 None:intergenic 45.0%
AAGGTTTGCACAACAGCTAG+AGG - chr3_3:84592368-84592387 Msa0479600:intron 45.0%
TTTGCACAACAGCTAGAGGT+TGG - chr3_3:84592372-84592391 Msa0479600:intron 45.0%
! GCACTTGATGAGTTGGCAAT+TGG + chr3_3:84593087-84593106 None:intergenic 45.0%
! AAAAACGCACTGCTGGCTAA+CGG + chr3_3:84593121-84593140 None:intergenic 45.0%
!!! CCAGCAGTGCGTTTTTTTGA+CGG - chr3_3:84593125-84593144 Msa0479600:intron 45.0%
CGGTAGGGACCAATTTCAAA+AGG - chr3_3:84593155-84593174 Msa0479600:intron 45.0%
CAAAAACGCGCGAACTTACA+GGG - chr3_3:84593231-84593250 Msa0479600:intron 45.0%
! AACTGAGGAAGCGTAATGAG+TGG - chr3_3:84593402-84593421 Msa0479600:CDS 45.0%
! ACTGAGGAAGCGTAATGAGT+GGG - chr3_3:84593403-84593422 Msa0479600:CDS 45.0%
!! CCAACTTGTTGGTAAACAGG+GGG + chr3_3:84593440-84593459 None:intergenic 45.0%
CATTCCGATGCTACCACAAA+TGG - chr3_3:84593551-84593570 Msa0479600:CDS 45.0%
TTCCGATGCTACCACAAATG+GGG - chr3_3:84593553-84593572 Msa0479600:CDS 45.0%
TCTCGGCTCTCTATACAGTT+AGG - chr3_3:84593605-84593624 Msa0479600:CDS 45.0%
CTCGGCTCTCTATACAGTTA+GGG - chr3_3:84593606-84593625 Msa0479600:CDS 45.0%
CTCTCTATACAGTTAGGGAG+CGG - chr3_3:84593611-84593630 Msa0479600:CDS 45.0%
! ATGACCACCCGGATCAATTT+TGG - chr3_3:84593734-84593753 Msa0479600:five_prime_UTR 45.0%
ACTACCAAAATTGATCCGGG+TGG + chr3_3:84593741-84593760 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTTTTC+AGG - chr3_3:84591228-84591247 Msa0479600:intron 5.0%
!!! TTTTATTATAAGTTTTTTAT+TGG - chr3_3:84593344-84593363 Msa0479600:CDS 5.0%
TTTGAGGGCCGTAAATCTGG+AGG - chr3_3:84588746-84588765 Msa0479600:three_prime_UTR 50.0%
CGTAAATCTGGAGGAGGAAG+AGG - chr3_3:84588755-84588774 Msa0479600:three_prime_UTR 50.0%
! GGCTCTGTGTTGTGTTGTTG+AGG - chr3_3:84588794-84588813 Msa0479600:three_prime_UTR 50.0%
GGTTAGGATCTTGGTTGCAG+AGG + chr3_3:84588843-84588862 None:intergenic 50.0%
GGAGGGGAATGAAATGGATC+AGG + chr3_3:84588864-84588883 None:intergenic 50.0%
AGAGGAAGAATCAGATGCGG+TGG + chr3_3:84589020-84589039 None:intergenic 50.0%
! ATTGTTGAGTGGTTCGGAGG+AGG + chr3_3:84589131-84589150 None:intergenic 50.0%
GATGAAGAAACAGACTGCGG+CGG + chr3_3:84589172-84589191 None:intergenic 50.0%
GAAGGCTTAGCAGACAAAGC+AGG + chr3_3:84589373-84589392 None:intergenic 50.0%
AAATTCACATCTGCCGCCGA+TGG - chr3_3:84589397-84589416 Msa0479600:intron 50.0%
TGCATTAGCAGTAGTGGCAG+TGG + chr3_3:84589766-84589785 None:intergenic 50.0%
! AATGGTGGAGCAACAACCGA+TGG + chr3_3:84589930-84589949 None:intergenic 50.0%
ATCAGTTGCCCCACCATTTC+CGG - chr3_3:84589953-84589972 Msa0479600:intron 50.0%
!! TCTGAAGCACCGGAAATGGT+GGG + chr3_3:84589965-84589984 None:intergenic 50.0%
!! ATCTGAAGCACCGGAAATGG+TGG + chr3_3:84589966-84589985 None:intergenic 50.0%
! TTAGGAGGGATCTGAAGCAC+CGG + chr3_3:84589975-84589994 None:intergenic 50.0%
TAACCCCCAACTGGTGATCT+TGG + chr3_3:84590050-84590069 None:intergenic 50.0%
AGATCACCAGTTGGGGGTTA+TGG - chr3_3:84590050-84590069 Msa0479600:intron 50.0%
GATCACCAGTTGGGGGTTAT+GGG - chr3_3:84590051-84590070 Msa0479600:intron 50.0%
CTGTGACTGTGCTCATCTAC+AGG + chr3_3:84590080-84590099 None:intergenic 50.0%
CTGTAGATGAGCACAGTCAC+AGG - chr3_3:84590078-84590097 Msa0479600:intron 50.0%
GTAGATGAGCACAGTCACAG+GGG - chr3_3:84590080-84590099 Msa0479600:intron 50.0%
ACTAGGCGCAATCAAGATCC+AGG - chr3_3:84590137-84590156 Msa0479600:intron 50.0%
ATGCTCATGCACCCCAACAT+AGG - chr3_3:84590180-84590199 Msa0479600:intron 50.0%
CCTCTGAGTGCATCCTATGT+TGG + chr3_3:84590196-84590215 None:intergenic 50.0%
CCAACATAGGATGCACTCAG+AGG - chr3_3:84590193-84590212 Msa0479600:intron 50.0%
TGCACTCAGAGGGATTTCTG+AGG - chr3_3:84590204-84590223 Msa0479600:intron 50.0%
GCAACTGGAAAGAACATCGC+CGG + chr3_3:84590450-84590469 None:intergenic 50.0%
GGCGATGTTCTTTCCAGTTG+CGG - chr3_3:84590449-84590468 Msa0479600:intron 50.0%
TATTATACTGGGTGGGGGAG+TGG + chr3_3:84590490-84590509 None:intergenic 50.0%
CGAACATGGACGTACATGGT+TGG - chr3_3:84590655-84590674 Msa0479600:intron 50.0%
GATCAGAGTGAGGAAGAAGG+TGG + chr3_3:84591620-84591639 None:intergenic 50.0%
TATGAGAGGGTGGGTATGGA+AGG + chr3_3:84591660-84591679 None:intergenic 50.0%
ATACCCAATGGCAATGGCCA+AGG - chr3_3:84591964-84591983 Msa0479600:intron 50.0%
CAATGGCCAAGGAAATGGTC+TGG - chr3_3:84591975-84591994 Msa0479600:CDS 50.0%
AAGCAGCTTGCAATAGCTGC+TGG + chr3_3:84592433-84592452 None:intergenic 50.0%
TTAGGGCGCAAGCTATGAGA+GGG - chr3_3:84592915-84592934 Msa0479600:CDS 50.0%
GAACAGAGTGAGGAAGAAGG+TGG - chr3_3:84592968-84592987 Msa0479600:intron 50.0%
CCGTCAAAAAAACGCACTGC+TGG + chr3_3:84593128-84593147 None:intergenic 50.0%
! TTTTGACGGAAACGGACGGT+AGG - chr3_3:84593139-84593158 Msa0479600:intron 50.0%
TTTGACGGAAACGGACGGTA+GGG - chr3_3:84593140-84593159 Msa0479600:intron 50.0%
! CCTGTAAGTTCGCGCGTTTT+TGG + chr3_3:84593233-84593252 None:intergenic 50.0%
CCAAAAACGCGCGAACTTAC+AGG - chr3_3:84593230-84593249 Msa0479600:intron 50.0%
TGCTACAGGGTGACAAACTG+AGG - chr3_3:84593387-84593406 Msa0479600:CDS 50.0%
CCCCCTGTTTACCAACAAGT+TGG - chr3_3:84593437-84593456 Msa0479600:CDS 50.0%
! ACTGCAAGTTGAACCAACCG+AGG + chr3_3:84593477-84593496 None:intergenic 50.0%
GTCCCCATTTGTGGTAGCAT+CGG + chr3_3:84593558-84593577 None:intergenic 50.0%
TCATGCAGAGTCCCCATTTG+TGG + chr3_3:84593567-84593586 None:intergenic 50.0%
! GGGTTAGGTATCGTTGGTTG+AGG + chr3_3:84593652-84593671 None:intergenic 50.0%
TCTGGAGGAGGAAGAGGAAG+AGG - chr3_3:84588761-84588780 Msa0479600:three_prime_UTR 55.0%
!! GGAAATTAGTGGTGGCGGCA+GGG + chr3_3:84589045-84589064 None:intergenic 55.0%
TCGCGGGAAATTAGTGGTGG+CGG + chr3_3:84589050-84589069 None:intergenic 55.0%
CTCAGCAACAACGAGGCCAT+TGG + chr3_3:84589320-84589339 None:intergenic 55.0%
CAATGGCCTCGTTGTTGCTG+AGG - chr3_3:84589318-84589337 Msa0479600:intron 55.0%
GACTGACCTCAGCAACAACG+AGG + chr3_3:84589327-84589346 None:intergenic 55.0%
GGAGATTGATCCGGCACCAT+CGG + chr3_3:84589416-84589435 None:intergenic 55.0%
!! GTGGCAGTGGCTTGTTTCTG+AGG + chr3_3:84589747-84589766 None:intergenic 55.0%
CAAAAACCGATGAAGCGCGG+AGG - chr3_3:84589831-84589850 Msa0479600:intron 55.0%
!! GGGGCAACTGATGGTAATGG+TGG + chr3_3:84589945-84589964 None:intergenic 55.0%
GGTGGGGCAACTGATGGTAA+TGG + chr3_3:84589948-84589967 None:intergenic 55.0%
! GGAAATGGTGGGGCAACTGA+TGG + chr3_3:84589954-84589973 None:intergenic 55.0%
!! CTGAAGCACCGGAAATGGTG+GGG + chr3_3:84589964-84589983 None:intergenic 55.0%
!! GGGATCTGAAGCACCGGAAA+TGG + chr3_3:84589969-84589988 None:intergenic 55.0%
TGGGGTCCAAGATCACCAGT+TGG - chr3_3:84590041-84590060 Msa0479600:intron 55.0%
GGGGTCCAAGATCACCAGTT+GGG - chr3_3:84590042-84590061 Msa0479600:intron 55.0%
GGGTCCAAGATCACCAGTTG+GGG - chr3_3:84590043-84590062 Msa0479600:intron 55.0%
GGTCCAAGATCACCAGTTGG+GGG - chr3_3:84590044-84590063 Msa0479600:intron 55.0%
! GGAGGTGCATGGGTCAAGAA+TGG + chr3_3:84590426-84590445 None:intergenic 55.0%
ACTGGAAAGAACATCGCCGG+AGG + chr3_3:84590447-84590466 None:intergenic 55.0%
! TGCTTTCCGCCACTGGCTAA+CGG - chr3_3:84591466-84591485 Msa0479600:intron 55.0%
TGTATGCGTCCGTTAGCCAG+TGG + chr3_3:84591478-84591497 None:intergenic 55.0%
GTTAGGGCGCAAGCTATGAG+AGG - chr3_3:84592914-84592933 Msa0479600:CDS 55.0%
! CTGGCTAACGGACGCATATG+TGG + chr3_3:84593109-84593128 None:intergenic 55.0%
! GGAAGCGTAATGAGTGGGAG+AGG - chr3_3:84593408-84593427 Msa0479600:CDS 55.0%
! CGTCGTCGCCCTATTAGTCT+CGG - chr3_3:84593588-84593607 Msa0479600:CDS 55.0%
GAGGGCCGTAAATCTGGAGG+AGG - chr3_3:84588749-84588768 Msa0479600:three_prime_UTR 60.0%
!! GGGAAATTAGTGGTGGCGGC+AGG + chr3_3:84589046-84589065 None:intergenic 60.0%
GTCAGCACCGCGAACAACCA+GGG + chr3_3:84589095-84589114 None:intergenic 60.0%
AGTCAGCACCGCGAACAACC+AGG + chr3_3:84589096-84589115 None:intergenic 60.0%
! GTTGAGTGGTTCGGAGGAGG+AGG + chr3_3:84589128-84589147 None:intergenic 60.0%
GAAGAAACAGACTGCGGCGG+AGG + chr3_3:84589169-84589188 None:intergenic 60.0%
GATTGATCCGGCACCATCGG+CGG + chr3_3:84589413-84589432 None:intergenic 60.0%
AGCAGTAGTGGCAGTGGCAG+TGG + chr3_3:84589760-84589779 None:intergenic 60.0%
AAACCGATGAAGCGCGGAGG+AGG - chr3_3:84589834-84589853 Msa0479600:intron 60.0%
TTGCCTCCTCCGCGCTTCAT+CGG + chr3_3:84589840-84589859 None:intergenic 60.0%
CTTGACCCATGCACCTCCTC+CGG - chr3_3:84590428-84590447 Msa0479600:intron 60.0%
GGAAAGAACATCGCCGGAGG+AGG + chr3_3:84590444-84590463 None:intergenic 60.0%
GGGGGAGTTTCTTCCGCAAC+TGG + chr3_3:84590465-84590484 None:intergenic 60.0%
TACTGGGTGGGGGAGTGGTT+GGG + chr3_3:84590485-84590504 None:intergenic 60.0%
ATACTGGGTGGGGGAGTGGT+TGG + chr3_3:84590486-84590505 None:intergenic 60.0%
TGGTCTCTGCTTTCCGCCAC+TGG - chr3_3:84591459-84591478 Msa0479600:intron 60.0%
ATGCGTCCGTTAGCCAGTGG+CGG + chr3_3:84591475-84591494 None:intergenic 60.0%
!! AGTGGTGGCGGCAGGGTTAG+AGG + chr3_3:84589038-84589057 None:intergenic 65.0%
TTCGGAGGAGGAGGAGGAGG+AGG + chr3_3:84589119-84589138 None:intergenic 65.0%
! TGGTTCGGAGGAGGAGGAGG+AGG + chr3_3:84589122-84589141 None:intergenic 65.0%
! GAGTGGTTCGGAGGAGGAGG+AGG + chr3_3:84589125-84589144 None:intergenic 65.0%
GAAACAGACTGCGGCGGAGG+AGG + chr3_3:84589166-84589185 None:intergenic 65.0%
ACATCTGCCGCCGATGGTGC+CGG - chr3_3:84589403-84589422 Msa0479600:intron 65.0%
GGCAGCCCATAACCCCCAAC+TGG + chr3_3:84590059-84590078 None:intergenic 65.0%
! CATCGCCGGAGGAGGTGCAT+GGG + chr3_3:84590436-84590455 None:intergenic 65.0%
! ACATCGCCGGAGGAGGTGCA+TGG + chr3_3:84590437-84590456 None:intergenic 65.0%
ACTGGGTGGGGGAGTGGTTG+GGG + chr3_3:84590484-84590503 None:intergenic 65.0%
CCAGGGCCCACGGAGAAGCA+AGG + chr3_3:84589078-84589097 None:intergenic 70.0%
CCTTGCTTCTCCGTGGGCCC+TGG - chr3_3:84589075-84589094 Msa0479600:three_prime_UTR 70.0%
CCGCGAACAACCAGGGCCCA+CGG + chr3_3:84589088-84589107 None:intergenic 70.0%
CCGTGGGCCCTGGTTGTTCG+CGG - chr3_3:84589085-84589104 Msa0479600:exon 70.0%
ACAGACTGCGGCGGAGGAGG+TGG + chr3_3:84589163-84589182 None:intergenic 70.0%
CTGGGTGGGGGAGTGGTTGG+GGG + chr3_3:84590483-84590502 None:intergenic 70.0%
GACTGCGGCGGAGGAGGTGG+TGG + chr3_3:84589160-84589179 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 84588746 84593936 84588746 ID=Msa0479600;Name=Msa0479600
chr3_3 mRNA 84588746 84593936 84588746 ID=Msa0479600-mRNA-1;Parent=Msa0479600;Name=Msa0479600-mRNA-1;_AED=0.08;_eAED=0.08;_QI=261|1|1|1|1|1|6|350|509
chr3_3 exon 84588746 84589287 84588746 ID=Msa0479600-mRNA-1:exon:24087;Parent=Msa0479600-mRNA-1
chr3_3 exon 84591361 84591432 84591361 ID=Msa0479600-mRNA-1:exon:24086;Parent=Msa0479600-mRNA-1
chr3_3 exon 84591972 84592062 84591972 ID=Msa0479600-mRNA-1:exon:24085;Parent=Msa0479600-mRNA-1
chr3_3 exon 84592147 84592306 84592147 ID=Msa0479600-mRNA-1:exon:24084;Parent=Msa0479600-mRNA-1
chr3_3 exon 84592383 84592959 84592383 ID=Msa0479600-mRNA-1:exon:24083;Parent=Msa0479600-mRNA-1
chr3_3 exon 84593238 84593936 84593238 ID=Msa0479600-mRNA-1:exon:24082;Parent=Msa0479600-mRNA-1
chr3_3 five_prime_UTR 84593676 84593936 84593676 ID=Msa0479600-mRNA-1:five_prime_utr;Parent=Msa0479600-mRNA-1
chr3_3 CDS 84593238 84593675 84593238 ID=Msa0479600-mRNA-1:cds;Parent=Msa0479600-mRNA-1
chr3_3 CDS 84592383 84592959 84592383 ID=Msa0479600-mRNA-1:cds;Parent=Msa0479600-mRNA-1
chr3_3 CDS 84592147 84592306 84592147 ID=Msa0479600-mRNA-1:cds;Parent=Msa0479600-mRNA-1
chr3_3 CDS 84591972 84592062 84591972 ID=Msa0479600-mRNA-1:cds;Parent=Msa0479600-mRNA-1
chr3_3 CDS 84591361 84591432 84591361 ID=Msa0479600-mRNA-1:cds;Parent=Msa0479600-mRNA-1
chr3_3 CDS 84589096 84589287 84589096 ID=Msa0479600-mRNA-1:cds;Parent=Msa0479600-mRNA-1
chr3_3 three_prime_UTR 84588746 84589095 84588746 ID=Msa0479600-mRNA-1:three_prime_utr;Parent=Msa0479600-mRNA-1
Gene Sequence

>Msa0479600

ATGGTTACTACCACCGCATCTGATTCTTCCTCTAACCCTGCCGCCACCACTAATTTCCCGCGAAAAAACCTTGCTTCTCCGTGGGCCCTGGTTGTTCGCGGTGCTGACTCCTCCTCCTCCTCCTCCTCCGAACCACTCAACAATCATTTGCCACCACCTCCTCCGCCGCAGTCTGTTTCTTCATCATCGTCTCTAGATTCAGCCAATCTAGTTGCTGCTGTTGTCGTAGATAACAACAACTCCAATGCTAATCATAAGATTAACAATGTGGTTAACGCTAACCCTAAAAAACCCGCTTGGAAGAACACATCCAATGGCCTCGTTGTTGCTGAGGTCAGTCATGTAATGGGTGCTGTCTCTTGGCCTGCTTTGTCTGCTAAGCCTTCTGCTAAATTCACATCTGCCGCCGATGGTGCCGGATCAATCTCCATTTCTCAGGGGCCTGTTACATCAAACTCACCTCAGAAACAAGCCACTGCCACTGCCACTACTGCTAATGCAAGACATACTCCTCCAATGAATCACAGTCATAGTGTGGCTAACAGACAAAAACCGATGAAGCGCGGAGGAGGCAACAACAATAACAATAAGCCTGGTCCTTTGTCAAACAGTTTATCTAACCCTCCTCAAGCTAATCATCAACCATCGGTTGTTGCTCCACCATTACCATCAGTTGCCCCACCATTTCCGGTGCTTCAGATCCCTCCTAATACTTTCTTGGTTGACGGGGTTCAGTCTTACAAGAACAATAATAGCTGGGGTCCAAGATCACCAGTTGGGGGTTATGGGCTGCCTGTAGATGAGCACAGTCACAGGGGTAATTTTGGGCACCGACCACGTAACAATTATGGCACTAGGCGCAATCAAGATCCAGGAAATACAATGAACACTAGAGATGCTCATGCACCCCAACATAGGATGCACTCAGAGGGATTTCTGAGGCCTACACTACCCAATTCTGCTTATTTAGGGTCTCAGCCTATGAGACCGTTTCTAAATCATGCAGGGTTTCATGAATTCTATTATTATCCAACACTACAGTTTGAACCCTTTGGAGGTATGCCATTCTTGACCCATGCACCTCCTCCGGCGATGTTCTTTCCAGTTGCGGAAGAAACTCCCCCAACCACTCCCCCACCCAGTATAATACTCAAACAAATTGATTATTATTTTAGTGATGTTAATTTGGCGAATGATGAATTTCTGAAGTCGAACATGGACGTACATGGTTGGGTTCCAATTTCTTTGATTGCAAATTTCCCGCGAGTTATAAATTTGACAAACAATACCGAATTGATACTAGATTCATTGAGAAATTCGTCGGTTGTGGAAGTAAATGGTGACAAACTGAGGAAGCGTAATGAGTGGGAGAGGTTTTTGCCCCCTGTTTACCAACAAGTTGGTTCTAGTTCAATATCCTCGGTTGGTTCAACTTGCAGTACCATAGCTGCTGATTTTGATAAGATCACACTAGATGAAGCAACTGTGCTTAAACATTCCGATGCTACCACAAATGGGGACTCTGCATGA
Protein sequence

>Msa0479600

MVTTTASDSSSNPAATTNFPRKNLASPWALVVRGADSSSSSSSEPLNNHLPPPPPPQSVSSSSSLDSANLVAAVVVDNNNSNANHKINNVVNANPKKPAWKNTSNGLVVAEVSHVMGAVSWPALSAKPSAKFTSAADGAGSISISQGPVTSNSPQKQATATATTANARHTPPMNHSHSVANRQKPMKRGGGNNNNNKPGPLSNSLSNPPQANHQPSVVAPPLPSVAPPFPVLQIPPNTFLVDGVQSYKNNNSWGPRSPVGGYGLPVDEHSHRGNFGHRPRNNYGTRRNQDPGNTMNTRDAHAPQHRMHSEGFLRPTLPNSAYLGSQPMRPFLNHAGFHEFYYYPTLQFEPFGGMPFLTHAPPPAMFFPVAEETPPTTPPPSIILKQIDYYFSDVNLANDEFLKSNMDVHGWVPISLIANFPRVINLTNNTELILDSLRNSSVVEVNGDKLRKRNEWERFLPPVYQQVGSSSISSVGSTCSTIAADFDKITLDEATVLKHSDATTNGDSA*