AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0491430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0491430 MtrunA17_Chr3g0083491 95.578 1176 43 2 1 1176 165 1331 0.0 2340
Msa0491430 MtrunA17_Chr2g0320751 25.896 614 319 23 565 1139 476 992 4.50e-40 161
Msa0491430 MtrunA17_Chr1g0212331 22.108 683 393 19 567 1163 403 1032 6.21e-28 122
Msa0491430 MtrunA17_Chr4g0024921 21.755 547 291 17 632 1132 447 902 5.61e-21 99.8
Msa0491430 MtrunA17_Chr7g0255821 30.568 229 138 7 565 786 294 508 8.43e-21 99.0
Msa0491430 MtrunA17_Chr7g0255821 27.815 151 105 2 1015 1162 668 817 1.85e-13 75.1
Msa0491430 MtrunA17_Chr1g0168031 26.039 361 220 10 564 884 588 941 3.79e-19 94.0
Msa0491430 MtrunA17_Chr1g0168031 32.479 117 78 1 1014 1129 1004 1120 1.43e-13 75.9
Msa0491430 MtrunA17_Chr2g0281601 30.147 136 94 1 1000 1134 1135 1270 1.00e-13 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0491430 AT3G54460.1 56.182 1189 444 13 13 1176 220 1356 0.0 1311
Msa0491430 AT3G54460.2 56.845 1103 401 12 99 1176 7 1059 0.0 1233
Msa0491430 AT5G22750.1 25.812 616 313 21 567 1139 491 1005 1.48e-42 169
Msa0491430 AT1G11100.5 25.312 640 394 23 567 1171 491 1081 2.12e-33 140
Msa0491430 AT1G11100.1 25.312 640 394 23 567 1171 634 1224 2.80e-33 140
Msa0491430 AT1G11100.2 24.123 684 391 24 567 1171 633 1267 2.74e-30 130
Msa0491430 AT1G11100.3 24.123 684 391 24 567 1171 491 1125 2.74e-30 130
Msa0491430 AT1G11100.4 24.123 684 391 24 567 1171 634 1268 3.30e-30 130
Msa0491430 AT3G20010.3 22.305 668 405 19 567 1163 149 773 5.38e-27 119
Msa0491430 AT3G20010.2 22.305 668 405 19 567 1163 124 748 5.93e-27 119
Msa0491430 AT3G20010.1 21.759 671 397 18 567 1159 415 1035 7.56e-27 119
Msa0491430 AT3G20010.5 21.759 671 397 18 567 1159 415 1035 7.56e-27 119
Msa0491430 AT3G20010.7 21.759 671 397 18 567 1159 415 1035 7.56e-27 119
Msa0491430 AT1G61140.3 23.538 667 383 23 567 1165 508 1115 1.94e-25 114
Msa0491430 AT1G61140.1 23.538 667 383 23 567 1165 666 1273 2.36e-25 114
Msa0491430 AT1G50410.2 24.157 534 328 16 635 1138 466 952 6.31e-24 109
Msa0491430 AT1G50410.1 24.157 534 328 16 635 1138 466 952 6.31e-24 109
Msa0491430 AT1G50410.3 24.157 534 328 16 635 1138 466 952 6.31e-24 109
Msa0491430 AT5G05130.1 29.545 220 137 8 558 771 349 556 3.13e-19 94.4
Msa0491430 AT5G43530.1 25.862 348 203 12 567 884 742 1064 4.01e-18 91.3
Msa0491430 AT5G43530.1 30.657 137 94 1 994 1129 1108 1244 7.42e-14 77.4
Msa0491430 AT1G02670.6 32.479 117 78 1 1015 1130 512 628 2.87e-15 81.3
Msa0491430 AT1G02670.3 32.479 117 78 1 1015 1130 539 655 2.89e-15 81.3
Msa0491430 AT1G02670.7 32.479 117 78 1 1015 1130 516 632 4.96e-15 80.5
Msa0491430 AT1G02670.1 32.479 117 78 1 1015 1130 527 643 5.45e-15 80.5
Msa0491430 AT1G05120.1 31.092 119 81 1 1015 1132 682 800 8.20e-15 80.1
Msa0491430 AT1G05120.2 31.092 119 81 1 1015 1132 725 843 8.26e-15 80.1
Msa0491430 AT1G02670.5 31.068 103 70 1 1015 1116 512 614 5.63e-12 70.5
Msa0491430 AT1G02670.2 31.068 103 70 1 1015 1116 539 641 6.05e-12 70.5

Find 278 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCTTGTCAATAGAAATTT+TGG 0.175597 3_4:-14117820 None:intergenic
TTACTTTAGAACTATTTATT+TGG 0.178123 3_4:+14121026 Msa0491430:three_prime_UTR
GGCTGGTGGTTATACTATTA+TGG 0.190268 3_4:+14117101 Msa0491430:CDS
CTACGAAATTTCCACTGTTT+TGG 0.219815 3_4:-14118767 None:intergenic
TGTTGAATGAACAGGATAAT+TGG 0.223532 3_4:+14119371 Msa0491430:intron
CTGATCAGGATTTAACAATT+TGG 0.226507 3_4:-14117190 None:intergenic
CCATAATAATTTGTGTTTCC+TGG 0.244235 3_4:-14120950 None:intergenic
GGTAGTTGTTCCAGCAAATT+TGG 0.245133 3_4:+14118088 Msa0491430:CDS
TAATGCAAGTGCACTGGTTT+AGG 0.287123 3_4:+14118285 Msa0491430:CDS
CATCTGCGCACTCGCTTGCC+TGG 0.292942 3_4:+14118192 Msa0491430:CDS
CCAGGAAACACAAATTATTA+TGG 0.295445 3_4:+14120950 Msa0491430:three_prime_UTR
CAGCAAATTTGGTTGATCAT+TGG 0.295875 3_4:+14118099 Msa0491430:CDS
CCAGAGGTTGAAAGCTTTGC+AGG 0.299028 3_4:+14119441 Msa0491430:CDS
CAATGATCAACCAAATTTGC+TGG 0.299556 3_4:-14118098 None:intergenic
ATACTGGCGGATCTGGGATT+TGG 0.301244 3_4:+14116602 Msa0491430:CDS
GTTGATACTTCATATGGTTC+TGG 0.303091 3_4:+14117453 Msa0491430:CDS
TTCCTTCATGAAGAAGCTTA+TGG 0.308034 3_4:+14118470 Msa0491430:CDS
CACAAAGTATTTCAAGCATT+TGG 0.310911 3_4:+14117921 Msa0491430:CDS
TGGGCCCACTGGACCTCAAT+AGG 0.312568 3_4:+14116665 Msa0491430:CDS
AATGGTCTAGATTCTACTTC+AGG 0.317795 3_4:+14118893 Msa0491430:CDS
TATTGACAAGCTTGCAGAAA+TGG 0.319995 3_4:+14117830 Msa0491430:CDS
AGGCTTTCATGCTGTGTTGC+TGG 0.327727 3_4:+14118809 Msa0491430:CDS
CTAGATGTTGATTGCCAATC+AGG 0.333695 3_4:-14119397 None:intergenic
ATGGACAATACTGGCGGATC+TGG 0.335524 3_4:+14116595 Msa0491430:CDS
AAAGTGCAGTTGTTTAAAAT+AGG 0.342173 3_4:-14117873 None:intergenic
TTGGAGAAAATGAGAGCATT+TGG 0.344489 3_4:+14116416 Msa0491430:CDS
TACTGGCGGATCTGGGATTT+GGG 0.346850 3_4:+14116603 Msa0491430:CDS
TATGGAGGACGATTGCATTT+GGG 0.349678 3_4:+14120968 Msa0491430:three_prime_UTR
GTCAATTGCATGTTTATGTT+TGG 0.351216 3_4:+14118153 Msa0491430:CDS
AGGGATGTGTGCCAAGATTC+AGG 0.351546 3_4:+14117129 Msa0491430:CDS
TTCCATGTAAATACTGTAAC+TGG 0.361846 3_4:+14116865 Msa0491430:CDS
CATTACTTCTACCTGAATCT+TGG 0.363612 3_4:-14117140 None:intergenic
GTTAATGGTATCAAATATAC+TGG 0.364522 3_4:+14119775 Msa0491430:CDS
TCTCTGTGAGCCATTAGATT+TGG 0.364555 3_4:+14118037 Msa0491430:CDS
AAAGCTTGCGGATAACAGTA+TGG 0.366539 3_4:+14117566 Msa0491430:CDS
TAATGCTACTTGAACATTCC+TGG 0.371689 3_4:-14119561 None:intergenic
TGCTGAAAGCAATTATCTAC+TGG 0.373523 3_4:+14120750 Msa0491430:CDS
TTATGGAGGACGATTGCATT+TGG 0.375558 3_4:+14120967 Msa0491430:three_prime_UTR
GTTGATAGAGCTGCATATAA+AGG 0.376494 3_4:-14116826 None:intergenic
GTTGCAAATGACTATTTCAT+TGG 0.380919 3_4:+14118361 Msa0491430:CDS
CTTGGGGTACAGACCACTTT+GGG 0.382124 3_4:-14119232 None:intergenic
GAAGCGTAAAGTTGATTGTT+TGG 0.386718 3_4:+14117497 Msa0491430:CDS
GCTAATGTTTCCACATGAAT+AGG 0.389546 3_4:-14120413 None:intergenic
TTGTAACTCAATAAGATCTT+GGG 0.390486 3_4:-14119249 None:intergenic
TCAAATCGGTGGATACTAAC+TGG 0.393580 3_4:+14118389 Msa0491430:CDS
AAACAGGAGACTGTATCTTA+TGG 0.393932 3_4:-14118927 None:intergenic
AATTAAAATTCTATATTCCC+TGG 0.394953 3_4:+14116645 Msa0491430:CDS
GTTGTAACTCAATAAGATCT+TGG 0.398290 3_4:-14119250 None:intergenic
TCCACGAAAATCTTTGATAG+TGG 0.398654 3_4:-14116911 None:intergenic
AAGCTTGTTGATACTTCATA+TGG 0.400306 3_4:+14117447 Msa0491430:CDS
ATTGTCCATAGGTATTATCT+TGG 0.402393 3_4:-14116581 None:intergenic
GTTGAATGAACAGGATAATT+GGG 0.403727 3_4:+14119372 Msa0491430:intron
GTGAGCCATTAGATTTGGTT+AGG 0.403839 3_4:+14118042 Msa0491430:CDS
TGTTTGGTGGCCACTGTGTC+AGG 0.403966 3_4:+14118945 Msa0491430:CDS
CCTGCAAAGCTTTCAACCTC+TGG 0.409697 3_4:-14119441 None:intergenic
GTTATACTATTATGGGTAAG+AGG 0.409884 3_4:+14117109 Msa0491430:CDS
AGAGCTTATGCAGCTGTGAT+TGG 0.410613 3_4:+14116344 Msa0491430:five_prime_UTR
CCTTGTTGCTAGAATGCATT+GGG 0.411990 3_4:-14119807 None:intergenic
GGTACAGACCACTTTGGGTT+AGG 0.415400 3_4:-14119227 None:intergenic
CCCCTGTGAGCGGTTCTTCA+AGG 0.417381 3_4:+14116479 Msa0491430:CDS
AGATGTGTAAGTTGGCTGTT+AGG 0.423057 3_4:-14118431 None:intergenic
CTGTTCTTAAAAGACTGTTC+TGG 0.424653 3_4:-14117654 None:intergenic
CCAGCACGATTCAAATTGTA+TGG 0.427164 3_4:+14119977 Msa0491430:CDS
GCTGGTGGTTATACTATTAT+GGG 0.427840 3_4:+14117102 Msa0491430:CDS
GGGCCCACTGGACCTCAATA+GGG 0.428655 3_4:+14116666 Msa0491430:CDS
ACAACTGCACTTTGTCCAAC+GGG 0.430181 3_4:+14117883 Msa0491430:CDS
TCATTCCGCATCATCATTCC+AGG 0.431472 3_4:+14119543 Msa0491430:CDS
AAGTAGAGAAAGGTGTATAC+AGG 0.433050 3_4:+14117955 Msa0491430:CDS
TATACATGTCATTGAACAAC+AGG 0.433121 3_4:+14119636 Msa0491430:CDS
CTCTTTCAGAGGAGAAATCA+TGG 0.434595 3_4:-14117167 None:intergenic
AGTATCTTTCTACAGTAGTC+TGG 0.436177 3_4:-14116394 None:intergenic
ATTTGAATCGTGCTGGAACT+TGG 0.438632 3_4:-14119970 None:intergenic
TATAACCTAACCAAATCTAA+TGG 0.441840 3_4:-14118047 None:intergenic
CACAAATAGAAAAGCATGTC+AGG 0.443390 3_4:+14118126 Msa0491430:CDS
TCTATATTCCCTGGGCCCAC+TGG 0.443461 3_4:+14116654 Msa0491430:CDS
CAAATTGTTAAATCCTGATC+AGG 0.446046 3_4:+14117191 Msa0491430:CDS
TAGCCGTTTGAGTGCGGAGT+GGG 0.446474 3_4:+14118241 Msa0491430:CDS
TATTTCCAAGATAATACCTA+TGG 0.446650 3_4:+14116576 Msa0491430:CDS
TGTACACTTTGTCTTGTCAA+TGG 0.446929 3_4:-14119141 None:intergenic
TTTGCCAACTCTTCTTTCGT+TGG 0.447961 3_4:-14117370 None:intergenic
AGGATAATTGGGATCCTGAT+TGG 0.449928 3_4:+14119383 Msa0491430:intron
ATAATACCTATGGACAATAC+TGG 0.450114 3_4:+14116586 Msa0491430:CDS
TTTCATTGGTTGCTTCAAAT+CGG 0.451100 3_4:+14118375 Msa0491430:CDS
GCTTGAAATACTTTGTGGTA+TGG 0.451295 3_4:-14117915 None:intergenic
GATGGATGGGAGTGCTGCAT+TGG 0.453061 3_4:+14120007 Msa0491430:CDS
TGATGTGGCTGCCCTTGGTA+TGG 0.453648 3_4:+14118013 Msa0491430:CDS
ATCTGCGCACTCGCTTGCCT+GGG 0.456519 3_4:+14118193 Msa0491430:CDS
CAGATGGGTCACCAGTAGTC+TGG 0.456981 3_4:+14117022 Msa0491430:CDS
ATAAGATACAGTCTCCTGTT+TGG 0.458193 3_4:+14118929 Msa0491430:CDS
GATGCAAAGTCTTGATTCAA+TGG 0.458452 3_4:+14119190 Msa0491430:CDS
GCAACTTGTTTGTTAAGCTC+AGG 0.460038 3_4:-14118343 None:intergenic
TTAGATGAAGGGCATACTCT+TGG 0.462268 3_4:+14118314 Msa0491430:CDS
AATTTGCTGGAACAACTACC+AGG 0.463905 3_4:-14118085 None:intergenic
ATGGATGGGAGTGCTGCATT+GGG 0.465054 3_4:+14120008 Msa0491430:CDS
CATGGGATGCTGGCGTGCTT+AGG 0.467040 3_4:+14118507 Msa0491430:CDS
CAAATGCTTGAAATACTTTG+TGG 0.470118 3_4:-14117920 None:intergenic
GGTTTAGTGATTTCCTGATC+AGG 0.470225 3_4:-14117204 None:intergenic
ATTTACCTTCTGTCCCAGAT+TGG 0.471541 3_4:-14120071 None:intergenic
TGTTCGGCGTAATATATTGA+TGG 0.471628 3_4:+14118703 Msa0491430:CDS
ATTAAAATTCTATATTCCCT+GGG 0.473601 3_4:+14116646 Msa0491430:CDS
CACCAGTTACAGTATTTACA+TGG 0.476766 3_4:-14116867 None:intergenic
ATCAGCAGGCAGCAGTTGAA+TGG 0.479240 3_4:+14116764 Msa0491430:CDS
CTTGCAGAAATGGAAACAAA+TGG 0.479957 3_4:+14117840 Msa0491430:CDS
TCCCTTGAAGAACCGCTCAC+AGG 0.482011 3_4:-14116481 None:intergenic
TAACTGGTGATATAGTCATC+GGG 0.482511 3_4:+14116881 Msa0491430:CDS
TATTCCTCAGAGCAAGCATC+AGG 0.483783 3_4:-14117264 None:intergenic
TGACACAGTGGCCACCAAAC+AGG 0.484233 3_4:-14118943 None:intergenic
GTCCATAAGCTTCTTCATGA+AGG 0.485696 3_4:-14118472 None:intergenic
TATTGAGGTCCAGTGGGCCC+AGG 0.485759 3_4:-14116663 None:intergenic
ATGCATGATTAGTGCTAGAA+AGG 0.486577 3_4:+14118586 Msa0491430:CDS
ATGGTCTAGATTCTACTTCA+GGG 0.489153 3_4:+14118894 Msa0491430:CDS
ACACGCTGGAGAAGATATTC+AGG 0.491050 3_4:+14118847 Msa0491430:CDS
AATTAGTCGTGCCCATCGTA+TGG 0.491970 3_4:+14120379 Msa0491430:CDS
CCAGGAAATACAAATTCGTA+TGG 0.492024 3_4:+14120898 Msa0491430:intron
TGGCGTGCTTAGGCCATTCG+AGG 0.492502 3_4:+14118517 Msa0491430:CDS
TTTGCTATTCTATTTATGCC+AGG 0.493575 3_4:+14120932 Msa0491430:three_prime_UTR
AAATTGTATGGCACTTCTGA+TGG 0.494975 3_4:+14119989 Msa0491430:CDS
CCCTTGAAGAACCGCTCACA+GGG 0.495081 3_4:-14116480 None:intergenic
CAGGCAAGCGAGTGCGCAGA+TGG 0.495564 3_4:-14118191 None:intergenic
CAGACTACTGGTGACCCATC+TGG 0.497077 3_4:-14117021 None:intergenic
TTACCAGGATTTCACTTGAA+AGG 0.498175 3_4:+14117693 Msa0491430:CDS
TTTATGTTTGGAACGATCAT+CGG 0.500097 3_4:+14118165 Msa0491430:CDS
CTGTTAGGAGTGTTCGATGT+TGG 0.500631 3_4:-14118416 None:intergenic
AAATCTGTTTCCTCATCAGC+AGG 0.501336 3_4:+14116750 Msa0491430:CDS
TCAACTGCTGCCTGCTGATG+AGG 0.502624 3_4:-14116760 None:intergenic
ACTCTACAACTCTGATACAA+AGG 0.503506 3_4:-14117630 None:intergenic
ACCTTGTTGCTAGAATGCAT+TGG 0.503718 3_4:-14119808 None:intergenic
AACAGATTTAACTTTGTGCA+AGG 0.507122 3_4:-14116736 None:intergenic
CTTCTAGTGCACCGACTCGC+AGG 0.507703 3_4:-14117291 None:intergenic
CCATACAATTTGAATCGTGC+TGG 0.508271 3_4:-14119977 None:intergenic
ACTACTCATTGGTAAATTCT+CGG 0.510262 3_4:+14117772 Msa0491430:CDS
GTAATATATTGATGGCTGAT+TGG 0.511643 3_4:+14118711 Msa0491430:CDS
GGCCCCACTCCGCACTCAAA+CGG 0.512630 3_4:-14118244 None:intergenic
GTTCCTTTCAAGTGAAATCC+TGG 0.515719 3_4:-14117696 None:intergenic
GCTTAAGGAGCACTACTCAT+TGG 0.516177 3_4:+14117761 Msa0491430:CDS
ATAGAAAAGCATGTCAGGCC+TGG 0.517076 3_4:+14118131 Msa0491430:CDS
TCTTCCATCTCTGCCTCGAA+TGG 0.518095 3_4:-14118530 None:intergenic
CCCTGTGAGCGGTTCTTCAA+GGG 0.522105 3_4:+14116480 Msa0491430:CDS
AAGAACCGCTCACAGGGGAA+TGG 0.522294 3_4:-14116474 None:intergenic
AACAACTGCACTTTGTCCAA+CGG 0.522924 3_4:+14117882 Msa0491430:CDS
GACTACTGTAGAAAGATACT+TGG 0.523086 3_4:+14116397 Msa0491430:CDS
GTCGACAAGGCGTAATGAAA+GGG 0.526633 3_4:-14119094 None:intergenic
AGCCATGCCTGCGCATAAGA+AGG 0.527424 3_4:-14119272 None:intergenic
TCTTGGGGTACAGACCACTT+TGG 0.527858 3_4:-14119233 None:intergenic
TGGACAATACTGGCGGATCT+GGG 0.528838 3_4:+14116596 Msa0491430:CDS
AATGTGATGCTTGTCACAAA+TGG 0.532521 3_4:+14117541 Msa0491430:CDS
CTCTGCTGATTTCCTACACA+AGG 0.532791 3_4:-14116547 None:intergenic
AAAACAACTTTCTTGATGCA+TGG 0.533458 3_4:-14118629 None:intergenic
AAGACAAAGTGTACATATCC+TGG 0.533923 3_4:+14119149 Msa0491430:CDS
CACAAAGACGCAAGGTACAT+TGG 0.534529 3_4:+14116990 Msa0491430:CDS
CACATCTACAACCATTGCTA+AGG 0.537808 3_4:+14118447 Msa0491430:CDS
ATTTCCAACGAAAGAAGAGT+TGG 0.540007 3_4:+14117366 Msa0491430:CDS
ATGAGTTGGTACTCACTGTT+CGG 0.540678 3_4:+14118687 Msa0491430:CDS
AGGAATTACTGAAGCAGCCA+AGG 0.540726 3_4:-14116716 None:intergenic
CCTCATGATTCATGTTCTGT+AGG 0.541036 3_4:+14117225 Msa0491430:CDS
CATTGGTTGCTTCAAATCGG+TGG 0.542676 3_4:+14118378 Msa0491430:CDS
AGGAATATTCGCCTGCGAGT+CGG 0.543870 3_4:+14117280 Msa0491430:CDS
AACCTTCTTATGCGCAGGCA+TGG 0.543968 3_4:+14119270 Msa0491430:CDS
GTTACAACCTTCTTATGCGC+AGG 0.544047 3_4:+14119265 Msa0491430:CDS
TGTCGACAAGGCGTAATGAA+AGG 0.544157 3_4:-14119095 None:intergenic
ATCAGTGGTAATAACACGGC+TGG 0.544193 3_4:+14117084 Msa0491430:CDS
GTTACAGTCTTACCCAAGCC+AGG 0.544684 3_4:-14116952 None:intergenic
CTCTACAACTCTGATACAAA+GGG 0.545584 3_4:-14117629 None:intergenic
GCAGCTCTATCAACTGATGA+TGG 0.546385 3_4:+14116835 Msa0491430:CDS
ATGGAGGACGATTGCATTTG+GGG 0.546748 3_4:+14120969 Msa0491430:three_prime_UTR
ATTGGTAAATTCTCGGACAA+AGG 0.547067 3_4:+14117779 Msa0491430:CDS
ATTTCACTTGAAAGGAACTC+CGG 0.547183 3_4:+14117701 Msa0491430:CDS
GACAGAGTTACAAGTGGCAT+GGG 0.550843 3_4:+14117475 Msa0491430:CDS
TAGGCCATTCGAGGCAGAGA+TGG 0.555199 3_4:+14118526 Msa0491430:CDS
CCCAATGCATTCTAGCAACA+AGG 0.557176 3_4:+14119807 Msa0491430:CDS
TGTATGGCACTTCTGATGGA+TGG 0.557768 3_4:+14119993 Msa0491430:CDS
ATTGAGGTCCAGTGGGCCCA+GGG 0.559176 3_4:-14116662 None:intergenic
TCCTACACAAGGGGAAGGTA+CGG 0.560133 3_4:-14116536 None:intergenic
GGACAAAGGAGGCTCTGACT+TGG 0.560926 3_4:+14117793 Msa0491430:CDS
TCTAAGATAACTTACTTACC+AGG 0.562932 3_4:+14117678 Msa0491430:CDS
TACATTTAGCCGTTTGAGTG+CGG 0.563559 3_4:+14118235 Msa0491430:CDS
CCACGAAAATCTTTGATAGT+GGG 0.564131 3_4:-14116910 None:intergenic
GGACAGAGTTACAAGTGGCA+TGG 0.565878 3_4:+14117474 Msa0491430:CDS
GTGCTCTAATGCAAGTGCAC+TGG 0.567512 3_4:+14118279 Msa0491430:CDS
ATTAGAGCACTCTTCTTACG+TGG 0.568097 3_4:-14118266 None:intergenic
GTAACTGGTGATATAGTCAT+CGG 0.568117 3_4:+14116880 Msa0491430:CDS
AGATACAGTCTCCTGTTTGG+TGG 0.570067 3_4:+14118932 Msa0491430:CDS
AGAGCTGCATATAAAGGATG+TGG 0.570630 3_4:-14116820 None:intergenic
TGGAGCCAATCTGGGACAGA+AGG 0.571632 3_4:+14120066 Msa0491430:CDS
GATGACAACATCATAATCCC+AGG 0.571751 3_4:-14118210 None:intergenic
TTATGAATTTCGTAGGTGCA+AGG 0.572108 3_4:+14119058 Msa0491430:intron
TTATACTATTATGGGTAAGA+GGG 0.573699 3_4:+14117110 Msa0491430:CDS
ATGTCATCATCTAAGAGCCT+TGG 0.574388 3_4:+14116699 Msa0491430:CDS
TGCGTCCCGTCCTATTCATG+TGG 0.574636 3_4:+14120403 Msa0491430:CDS
TAACAATTTGGCTCTTTCAG+AGG 0.574738 3_4:-14117178 None:intergenic
TTCGAGGCAGAGATGGAAGA+AGG 0.574892 3_4:+14118533 Msa0491430:CDS
TCACAAATGGCGAAAGCTTG+CGG 0.575828 3_4:+14117554 Msa0491430:CDS
CAGAAAATCCTAACCCAAAG+TGG 0.576600 3_4:+14119219 Msa0491430:CDS
AAAGGAGGCTCTGACTTGGT+TGG 0.577350 3_4:+14117797 Msa0491430:CDS
TTTCACTTGAAAGGAACTCC+GGG 0.578633 3_4:+14117702 Msa0491430:CDS
TCATACAAGTTATCACAGCC+AGG 0.581057 3_4:-14119167 None:intergenic
TTATGTTGACACCAGACTAC+TGG 0.582238 3_4:-14117033 None:intergenic
ATTAGTCGTGCCCATCGTAT+GGG 0.583520 3_4:+14120380 Msa0491430:CDS
AGAAGATATTCAGGAAACAA+TGG 0.583877 3_4:+14118856 Msa0491430:CDS
TGAGCGGTTCTTCAAGGGAA+AGG 0.588938 3_4:+14116485 Msa0491430:CDS
TGTCAATGGAAACACAATCA+AGG 0.590521 3_4:-14119127 None:intergenic
ACATTGGCGGATCCACCAGA+TGG 0.590534 3_4:+14117006 Msa0491430:CDS
GATGTTGTCAAATCTGAAGA+TGG 0.590681 3_4:+14120694 Msa0491430:CDS
ATACTTGTCAAGAGCAACCC+TGG 0.590847 3_4:+14118067 Msa0491430:CDS
GACGGGACGCACCCATACGA+TGG 0.591504 3_4:-14120391 None:intergenic
TGTTTCCACATGAATAGGAC+GGG 0.593054 3_4:-14120408 None:intergenic
TCATGAAGGAACCTTAGCAA+TGG 0.594391 3_4:-14118458 None:intergenic
TTGTCAAATCTGAAGATGGT+GGG 0.595354 3_4:+14120698 Msa0491430:CDS
TGCTAGAAGTTACAATGAGT+TGG 0.601484 3_4:+14118673 Msa0491430:CDS
CAGAGGTTGAAAGCTTTGCA+GGG 0.604660 3_4:+14119442 Msa0491430:CDS
AGCCGTTTGAGTGCGGAGTG+GGG 0.605704 3_4:+14118242 Msa0491430:CDS
AAGCTTGCGGATAACAGTAT+GGG 0.608301 3_4:+14117567 Msa0491430:CDS
GGAAATACAAATTCGTATGG+AGG 0.608478 3_4:+14120901 Msa0491430:intron
GATCCGCCAGTATTGTCCAT+AGG 0.610382 3_4:-14116592 None:intergenic
TCTCTTATCACAAAGACGCA+AGG 0.612018 3_4:+14116982 Msa0491430:CDS
CATTGGCGGATCCACCAGAT+GGG 0.612044 3_4:+14117007 Msa0491430:CDS
ACAACTTTCTTGATGCATGG+TGG 0.612301 3_4:-14118626 None:intergenic
ACGGGACGCACCCATACGAT+GGG 0.612774 3_4:-14120390 None:intergenic
GGTAAATTCTCGGACAAAGG+AGG 0.613744 3_4:+14117782 Msa0491430:CDS
GAAACCCTATTGAGGTCCAG+TGG 0.614244 3_4:-14116670 None:intergenic
GTATGGATTCACAGTCCCGT+TGG 0.614716 3_4:-14117898 None:intergenic
AAAGACGCAAGGTACATTGG+CGG 0.619575 3_4:+14116993 Msa0491430:CDS
GTATGGCACTTCTGATGGAT+GGG 0.620158 3_4:+14119994 Msa0491430:CDS
AAACCCTATTGAGGTCCAGT+GGG 0.622694 3_4:-14116669 None:intergenic
ATGTTGCAGAAACCCTATTG+AGG 0.623777 3_4:-14116678 None:intergenic
CATATTAAAGTTACACACGC+TGG 0.624968 3_4:+14118833 Msa0491430:CDS
ATGTTTCCACATGAATAGGA+CGG 0.627738 3_4:-14120409 None:intergenic
ATGGTTGTAGATGTGTAAGT+TGG 0.627824 3_4:-14118439 None:intergenic
AAGCTCCATTCCCCTGTGAG+CGG 0.628644 3_4:+14116469 Msa0491430:CDS
GGAAACACAAATTATTATGG+AGG 0.629296 3_4:+14120953 Msa0491430:three_prime_UTR
AGTAGACTTTCCACATGCGA+AGG 0.629550 3_4:-14118740 None:intergenic
GTCTACTGAATCCAAAACAG+TGG 0.630419 3_4:+14118756 Msa0491430:CDS
AAAGTCTTGATTCAATGGCA+CGG 0.632822 3_4:+14119195 Msa0491430:CDS
AGTGGTAATAACACGGCTGG+TGG 0.634167 3_4:+14117087 Msa0491430:CDS
CAGGAGACTGTATCTTATGG+AGG 0.634908 3_4:-14118924 None:intergenic
TTAGAGCACTCTTCTTACGT+GGG 0.635425 3_4:-14118265 None:intergenic
CGAGATCAGTGGTAATAACA+CGG 0.636732 3_4:+14117080 Msa0491430:CDS
ACCGTACCTTCCCCTTGTGT+AGG 0.636865 3_4:+14116535 Msa0491430:CDS
ACCTCCTGATGCTTGCTCTG+AGG 0.637926 3_4:+14117260 Msa0491430:CDS
ACATAAACATGCAATTGACC+AGG 0.640310 3_4:-14118149 None:intergenic
AGGCAGAGATGGAAGAAGGT+CGG 0.641182 3_4:+14118537 Msa0491430:CDS
TGGTCTAGATTCTACTTCAG+GGG 0.641369 3_4:+14118895 Msa0491430:CDS
GCTCACAGAGAGCCATACCA+AGG 0.642203 3_4:-14118025 None:intergenic
TGTCAAATCTGAAGATGGTG+GGG 0.643211 3_4:+14120699 Msa0491430:CDS
AATTTCGTAGGTGCAAGGAA+TGG 0.643325 3_4:+14119063 Msa0491430:intron
TAGAGAAAGGTGTATACAGG+TGG 0.643392 3_4:+14117958 Msa0491430:CDS
TCCTCAGAGCAAGCATCAGG+AGG 0.643607 3_4:-14117261 None:intergenic
TGGGTAATTCTAATGCAGCA+TGG 0.644906 3_4:+14117586 Msa0491430:CDS
AAGGCGTAATGAAAGGGAGT+CGG 0.645028 3_4:-14119088 None:intergenic
ACTAATTCAGAAACTCCAGA+AGG 0.645868 3_4:+14120790 Msa0491430:three_prime_UTR
TGTAACTCAATAAGATCTTG+GGG 0.649776 3_4:-14119248 None:intergenic
CTGCTGATTTCCTACACAAG+GGG 0.650157 3_4:-14116545 None:intergenic
TTGGAATGATCCTTCGCATG+TGG 0.651252 3_4:+14118730 Msa0491430:CDS
CACTTGAAAGGAACTCCGGG+TGG 0.654146 3_4:+14117705 Msa0491430:CDS
CCTACAGAACATGAATCATG+AGG 0.654419 3_4:-14117225 None:intergenic
GTGGAAACATTAGCTATGCG+TGG 0.666167 3_4:+14120422 Msa0491430:CDS
GTTTGGAGTACAGTGATACG+TGG 0.666295 3_4:+14117514 Msa0491430:CDS
TGTGGCTATTACGAGATCAG+TGG 0.666939 3_4:+14117069 Msa0491430:CDS
ACTACTGGTGACCCATCTGG+TGG 0.667483 3_4:-14117018 None:intergenic
GCGGAATGACTTGTGTGCAA+AGG 0.667601 3_4:-14119529 None:intergenic
GTCAAATCTGAAGATGGTGG+GGG 0.669627 3_4:+14120700 Msa0491430:CDS
TCTATATTTCACAGATGACG+AGG 0.671046 3_4:+14117335 Msa0491430:CDS
TTAGCCGTTTGAGTGCGGAG+TGG 0.671278 3_4:+14118240 Msa0491430:CDS
ATACCTATGGACAATACTGG+CGG 0.671595 3_4:+14116589 Msa0491430:CDS
TCTGCTGATTTCCTACACAA+GGG 0.673987 3_4:-14116546 None:intergenic
GTTGTCAAATCTGAAGATGG+TGG 0.674583 3_4:+14120697 Msa0491430:CDS
CTCACAGAGAGCCATACCAA+GGG 0.681432 3_4:-14118024 None:intergenic
TGATTTCCTACACAAGGGGA+AGG 0.681549 3_4:-14116541 None:intergenic
AAGTTGCATATCTCGTCCAG+AGG 0.698811 3_4:+14119425 Msa0491430:CDS
ATTTGCTGGAACAACTACCA+GGG 0.699718 3_4:-14118084 None:intergenic
AAACAGTGGAAATTTCGTAG+TGG 0.699967 3_4:+14118770 Msa0491430:CDS
AGGCACAACATATGTCGACA+AGG 0.703206 3_4:-14119107 None:intergenic
AACTGGTGATATAGTCATCG+GGG 0.706873 3_4:+14116882 Msa0491430:CDS
ACATTCCTGGAATGATGATG+CGG 0.709579 3_4:-14119548 None:intergenic
GTTCTGGACAGAGTTACAAG+TGG 0.713387 3_4:+14117469 Msa0491430:CDS
AAGTAGCATTAGTACCAATG+TGG 0.718006 3_4:+14119573 Msa0491430:CDS
CCTTGAAGAACCGCTCACAG+GGG 0.734849 3_4:-14116479 None:intergenic
AAGTCTATTACCTGACACAG+TGG 0.740884 3_4:-14118955 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCAAATTTTTAAGATTTTTT+GGG - chr3_4:14117989-14118008 None:intergenic 10.0%
!! AAATATAATAGATTTACAAA+TGG - chr3_4:14119685-14119704 None:intergenic 10.0%
!!! GTCAAATTTTTAAGATTTTT+TGG - chr3_4:14117990-14118009 None:intergenic 15.0%
!!! AAAATATCAAAACTTTTTCA+GGG - chr3_4:14119600-14119619 None:intergenic 15.0%
!!! ATCTATTATATTTTATTCGT+TGG + chr3_4:14119692-14119711 Msa0491430:intron 15.0%
!!! TAAGTTTATATTTTCAGAAA+CGG - chr3_4:14119892-14119911 None:intergenic 15.0%
!! TGAAAATATAAACTTACATT+TGG + chr3_4:14119896-14119915 Msa0491430:intron 15.0%
!!! TTACTTTAGAACTATTTATT+TGG + chr3_4:14121026-14121045 Msa0491430:three_prime_UTR 15.0%
!! GTCAAAAAACAAAAATTAAA+AGG + chr3_4:14121054-14121073 Msa0491430:three_prime_UTR 15.0%
!!! AAATTAAAAGGTTATGTTTT+TGG + chr3_4:14121066-14121085 Msa0491430:three_prime_UTR 15.0%
!! AATTAAAATTCTATATTCCC+TGG + chr3_4:14116645-14116664 Msa0491430:CDS 20.0%
!! ATTAAAATTCTATATTCCCT+GGG + chr3_4:14116646-14116665 Msa0491430:CDS 20.0%
!!! TAAAAATTTGACTTTTGATG+TGG + chr3_4:14117998-14118017 Msa0491430:CDS 20.0%
!!! TTTAGGATAATTTTAGATGA+AGG + chr3_4:14118302-14118321 Msa0491430:CDS 20.0%
!!! TTAGGATAATTTTAGATGAA+GGG + chr3_4:14118303-14118322 Msa0491430:CDS 20.0%
!!! TGTTTTACTAGATTTTAATG+AGG + chr3_4:14118646-14118665 Msa0491430:CDS 20.0%
!!! GAAAATATCAAAACTTTTTC+AGG - chr3_4:14119601-14119620 None:intergenic 20.0%
!!! TAAATTTCTATTTTTCCAGT+TGG + chr3_4:14119750-14119769 Msa0491430:intron 20.0%
!!! TGTTACACATGTATTTTTAA+TGG + chr3_4:14120046-14120065 Msa0491430:CDS 20.0%
!!! GTGAAAATTTTAATTGAAGT+AGG - chr3_4:14120298-14120317 None:intergenic 20.0%
!! GAGTTAGAAGAAAATTAAAT+CGG - chr3_4:14120327-14120346 None:intergenic 20.0%
!! TTGTTAAACTAAATTTAGGA+TGG - chr3_4:14120512-14120531 None:intergenic 20.0%
!!! ATCCTAAATTTAGTTTAACA+AGG + chr3_4:14120511-14120530 Msa0491430:intron 20.0%
!!! TCCTAAATTTAGTTTAACAA+GGG + chr3_4:14120512-14120531 Msa0491430:intron 20.0%
! TATTTCCAAGATAATACCTA+TGG + chr3_4:14116576-14116595 Msa0491430:CDS 25.0%
! CATAACACTAACAAAAAATG+TGG + chr3_4:14117051-14117070 Msa0491430:CDS 25.0%
! TTATACTATTATGGGTAAGA+GGG + chr3_4:14117110-14117129 Msa0491430:CDS 25.0%
!!! GATGCATGTTTTGTTTTAAT+TGG - chr3_4:14117399-14117418 None:intergenic 25.0%
!! AAGCTTGTCAATAGAAATTT+TGG - chr3_4:14117823-14117842 None:intergenic 25.0%
!! AAAGTGCAGTTGTTTAAAAT+AGG - chr3_4:14117876-14117895 None:intergenic 25.0%
!!! CTTTCTCTACTTTCTTTTTT+AGG - chr3_4:14117947-14117966 None:intergenic 25.0%
! CTAAAAAAGAAAGTAGAGAA+AGG + chr3_4:14117945-14117964 Msa0491430:CDS 25.0%
! TATAACCTAACCAAATCTAA+TGG - chr3_4:14118050-14118069 None:intergenic 25.0%
! ATGGATATGTTAGTGAAAAA+TGG + chr3_4:14118875-14118894 Msa0491430:CDS 25.0%
!! CATCATTTTATGAATTTCGT+AGG + chr3_4:14119051-14119070 Msa0491430:intron 25.0%
! TTGTAACTCAATAAGATCTT+GGG - chr3_4:14119252-14119271 None:intergenic 25.0%
! ATTACAACAGAATATGCAAA+TGG - chr3_4:14119718-14119737 None:intergenic 25.0%
! GTTAATGGTATCAAATATAC+TGG + chr3_4:14119775-14119794 Msa0491430:CDS 25.0%
!!! AAATTAAGCTGTTTTGCTAA+AGG + chr3_4:14120128-14120147 Msa0491430:intron 25.0%
! TCCCTTGTTAAACTAAATTT+AGG - chr3_4:14120516-14120535 None:intergenic 25.0%
! GAATTATTAGGACAAGAAAA+AGG - chr3_4:14120613-14120632 None:intergenic 25.0%
!! CAATAGAAGCATGAATTATT+AGG - chr3_4:14120625-14120644 None:intergenic 25.0%
!!! TACCTATTTTATTTTTTGCC+AGG + chr3_4:14120880-14120899 Msa0491430:intron 25.0%
! TTCCTGGCAAAAAATAAAAT+AGG - chr3_4:14120885-14120904 None:intergenic 25.0%
ATTGTCCATAGGTATTATCT+TGG - chr3_4:14116584-14116603 None:intergenic 30.0%
ATAATACCTATGGACAATAC+TGG + chr3_4:14116586-14116605 Msa0491430:CDS 30.0%
! AACAGATTTAACTTTGTGCA+AGG - chr3_4:14116739-14116758 None:intergenic 30.0%
TTCCATGTAAATACTGTAAC+TGG + chr3_4:14116865-14116884 Msa0491430:CDS 30.0%
GTTATACTATTATGGGTAAG+AGG + chr3_4:14117109-14117128 Msa0491430:CDS 30.0%
CTGATCAGGATTTAACAATT+TGG - chr3_4:14117193-14117212 None:intergenic 30.0%
CAAATTGTTAAATCCTGATC+AGG + chr3_4:14117191-14117210 Msa0491430:CDS 30.0%
!! AAGCTTGTTGATACTTCATA+TGG + chr3_4:14117447-14117466 Msa0491430:CDS 30.0%
! TCTAAGATAACTTACTTACC+AGG + chr3_4:14117678-14117697 Msa0491430:CDS 30.0%
! ATTTTTCACTAGTGTGCTTA+AGG + chr3_4:14117746-14117765 Msa0491430:CDS 30.0%
ACTACTCATTGGTAAATTCT+CGG + chr3_4:14117772-14117791 Msa0491430:CDS 30.0%
CAAATGCTTGAAATACTTTG+TGG - chr3_4:14117923-14117942 None:intergenic 30.0%
! CACAAAGTATTTCAAGCATT+TGG + chr3_4:14117921-14117940 Msa0491430:CDS 30.0%
GTCAATTGCATGTTTATGTT+TGG + chr3_4:14118153-14118172 Msa0491430:CDS 30.0%
! TTTATGTTTGGAACGATCAT+CGG + chr3_4:14118165-14118184 Msa0491430:CDS 30.0%
GTTGCAAATGACTATTTCAT+TGG + chr3_4:14118361-14118380 Msa0491430:CDS 30.0%
! TTTCATTGGTTGCTTCAAAT+CGG + chr3_4:14118375-14118394 Msa0491430:CDS 30.0%
! ATGGACTGAATCAAAAATCA+TGG + chr3_4:14118489-14118508 Msa0491430:CDS 30.0%
TGGACTGAATCAAAAATCAT+GGG + chr3_4:14118490-14118509 Msa0491430:CDS 30.0%
AAAACAACTTTCTTGATGCA+TGG - chr3_4:14118632-14118651 None:intergenic 30.0%
! GTAATATATTGATGGCTGAT+TGG + chr3_4:14118711-14118730 Msa0491430:CDS 30.0%
GTGGAGCTATAAAAAATGTA+AGG + chr3_4:14118789-14118808 Msa0491430:CDS 30.0%
AGAAGATATTCAGGAAACAA+TGG + chr3_4:14118856-14118875 Msa0491430:CDS 30.0%
TGTAACTCAATAAGATCTTG+GGG - chr3_4:14119251-14119270 None:intergenic 30.0%
GTTGTAACTCAATAAGATCT+TGG - chr3_4:14119253-14119272 None:intergenic 30.0%
ATTGTGATTGTTGAATGAAC+AGG + chr3_4:14119363-14119382 Msa0491430:intron 30.0%
TGTTGAATGAACAGGATAAT+TGG + chr3_4:14119371-14119390 Msa0491430:intron 30.0%
GTTGAATGAACAGGATAATT+GGG + chr3_4:14119372-14119391 Msa0491430:intron 30.0%
TATACATGTCATTGAACAAC+AGG + chr3_4:14119636-14119655 Msa0491430:CDS 30.0%
GATTTACAAATGGTCACAAT+TGG - chr3_4:14119675-14119694 None:intergenic 30.0%
! TACATTTGGTTTCTGATCTT+TGG + chr3_4:14119910-14119929 Msa0491430:intron 30.0%
!! TATTTTTAATGGAGCCAATC+TGG + chr3_4:14120057-14120076 Msa0491430:CDS 30.0%
! ATTTTTAATGGAGCCAATCT+GGG + chr3_4:14120058-14120077 Msa0491430:CDS 30.0%
ATCATCGTTTGCATATGAAT+CGG - chr3_4:14120105-14120124 None:intergenic 30.0%
!! TTGCTTTTGAATGTGTAAAC+TGG + chr3_4:14120208-14120227 Msa0491430:intron 30.0%
TTAAATAAAGCGACTGTTAG+TGG + chr3_4:14120241-14120260 Msa0491430:intron 30.0%
! GCAAATGCTAGAATTTTTAC+AGG + chr3_4:14120457-14120476 Msa0491430:CDS 30.0%
!!! GCTTTTTCCTATTCTAGTTT+CGG + chr3_4:14120826-14120845 Msa0491430:intron 30.0%
!! TTTGCTATTCTATTTATGCC+AGG + chr3_4:14120932-14120951 Msa0491430:three_prime_UTR 30.0%
! CCATAATAATTTGTGTTTCC+TGG - chr3_4:14120953-14120972 None:intergenic 30.0%
CCAGGAAACACAAATTATTA+TGG + chr3_4:14120950-14120969 Msa0491430:three_prime_UTR 30.0%
GGAAACACAAATTATTATGG+AGG + chr3_4:14120953-14120972 Msa0491430:three_prime_UTR 30.0%
AGTATCTTTCTACAGTAGTC+TGG - chr3_4:14116397-14116416 None:intergenic 35.0%
GACTACTGTAGAAAGATACT+TGG + chr3_4:14116397-14116416 Msa0491430:CDS 35.0%
!! TTGGAGAAAATGAGAGCATT+TGG + chr3_4:14116416-14116435 Msa0491430:CDS 35.0%
! GTTGATAGAGCTGCATATAA+AGG - chr3_4:14116829-14116848 None:intergenic 35.0%
CACCAGTTACAGTATTTACA+TGG - chr3_4:14116870-14116889 None:intergenic 35.0%
GTAACTGGTGATATAGTCAT+CGG + chr3_4:14116880-14116899 Msa0491430:CDS 35.0%
TAACTGGTGATATAGTCATC+GGG + chr3_4:14116881-14116900 Msa0491430:CDS 35.0%
! CCACGAAAATCTTTGATAGT+GGG - chr3_4:14116913-14116932 None:intergenic 35.0%
TCCACGAAAATCTTTGATAG+TGG - chr3_4:14116914-14116933 None:intergenic 35.0%
! ACTATCAAAGATTTTCGTGG+AGG + chr3_4:14116913-14116932 Msa0491430:CDS 35.0%
GCTGGTGGTTATACTATTAT+GGG + chr3_4:14117102-14117121 Msa0491430:CDS 35.0%
CATTACTTCTACCTGAATCT+TGG - chr3_4:14117143-14117162 None:intergenic 35.0%
!! TAACAATTTGGCTCTTTCAG+AGG - chr3_4:14117181-14117200 None:intergenic 35.0%
TCTATATTTCACAGATGACG+AGG + chr3_4:14117335-14117354 Msa0491430:CDS 35.0%
ATTTCCAACGAAAGAAGAGT+TGG + chr3_4:14117366-14117385 Msa0491430:CDS 35.0%
!!! AAGCTTGTTTTGAGACATCT+GGG - chr3_4:14117433-14117452 None:intergenic 35.0%
GTTGATACTTCATATGGTTC+TGG + chr3_4:14117453-14117472 Msa0491430:CDS 35.0%
! GAAGCGTAAAGTTGATTGTT+TGG + chr3_4:14117497-14117516 Msa0491430:CDS 35.0%
AATGTGATGCTTGTCACAAA+TGG + chr3_4:14117541-14117560 Msa0491430:CDS 35.0%
CTCTACAACTCTGATACAAA+GGG - chr3_4:14117632-14117651 None:intergenic 35.0%
ACTCTACAACTCTGATACAA+AGG - chr3_4:14117633-14117652 None:intergenic 35.0%
CTGTTCTTAAAAGACTGTTC+TGG - chr3_4:14117657-14117676 None:intergenic 35.0%
TTACCAGGATTTCACTTGAA+AGG + chr3_4:14117693-14117712 Msa0491430:CDS 35.0%
ATTTCACTTGAAAGGAACTC+CGG + chr3_4:14117701-14117720 Msa0491430:CDS 35.0%
ATTGGTAAATTCTCGGACAA+AGG + chr3_4:14117779-14117798 Msa0491430:CDS 35.0%
TATTGACAAGCTTGCAGAAA+TGG + chr3_4:14117830-14117849 Msa0491430:CDS 35.0%
CTTGCAGAAATGGAAACAAA+TGG + chr3_4:14117840-14117859 Msa0491430:CDS 35.0%
GCTTGAAATACTTTGTGGTA+TGG - chr3_4:14117918-14117937 None:intergenic 35.0%
! AAGTAGAGAAAGGTGTATAC+AGG + chr3_4:14117955-14117974 Msa0491430:CDS 35.0%
CAATGATCAACCAAATTTGC+TGG - chr3_4:14118101-14118120 None:intergenic 35.0%
CAGCAAATTTGGTTGATCAT+TGG + chr3_4:14118099-14118118 Msa0491430:CDS 35.0%
! CACAAATAGAAAAGCATGTC+AGG + chr3_4:14118126-14118145 Msa0491430:CDS 35.0%
ACATAAACATGCAATTGACC+AGG - chr3_4:14118152-14118171 None:intergenic 35.0%
ATGGTTGTAGATGTGTAAGT+TGG - chr3_4:14118442-14118461 None:intergenic 35.0%
TTCCTTCATGAAGAAGCTTA+TGG + chr3_4:14118470-14118489 Msa0491430:CDS 35.0%
AATCAAAAATCATGGGATGC+TGG + chr3_4:14118497-14118516 Msa0491430:CDS 35.0%
ATGCATGATTAGTGCTAGAA+AGG + chr3_4:14118586-14118605 Msa0491430:CDS 35.0%
TGCTAGAAGTTACAATGAGT+TGG + chr3_4:14118673-14118692 Msa0491430:CDS 35.0%
TGTTCGGCGTAATATATTGA+TGG + chr3_4:14118703-14118722 Msa0491430:CDS 35.0%
! CTACGAAATTTCCACTGTTT+TGG - chr3_4:14118770-14118789 None:intergenic 35.0%
AAACAGTGGAAATTTCGTAG+TGG + chr3_4:14118770-14118789 Msa0491430:CDS 35.0%
CATATTAAAGTTACACACGC+TGG + chr3_4:14118833-14118852 Msa0491430:CDS 35.0%
AATGGTCTAGATTCTACTTC+AGG + chr3_4:14118893-14118912 Msa0491430:CDS 35.0%
ATGGTCTAGATTCTACTTCA+GGG + chr3_4:14118894-14118913 Msa0491430:CDS 35.0%
AAACAGGAGACTGTATCTTA+TGG - chr3_4:14118930-14118949 None:intergenic 35.0%
ATAAGATACAGTCTCCTGTT+TGG + chr3_4:14118929-14118948 Msa0491430:CDS 35.0%
TTATGAATTTCGTAGGTGCA+AGG + chr3_4:14119058-14119077 Msa0491430:intron 35.0%
TGTCAATGGAAACACAATCA+AGG - chr3_4:14119130-14119149 None:intergenic 35.0%
TGTACACTTTGTCTTGTCAA+TGG - chr3_4:14119144-14119163 None:intergenic 35.0%
AAGACAAAGTGTACATATCC+TGG + chr3_4:14119149-14119168 Msa0491430:CDS 35.0%
GATGCAAAGTCTTGATTCAA+TGG + chr3_4:14119190-14119209 Msa0491430:CDS 35.0%
AAAGTCTTGATTCAATGGCA+CGG + chr3_4:14119195-14119214 Msa0491430:CDS 35.0%
! TAATGCTACTTGAACATTCC+TGG - chr3_4:14119564-14119583 None:intergenic 35.0%
AAGTAGCATTAGTACCAATG+TGG + chr3_4:14119573-14119592 Msa0491430:CDS 35.0%
! TTTTTCCAGTTGGCTGTTAA+TGG + chr3_4:14119760-14119779 Msa0491430:intron 35.0%
AAATTGTATGGCACTTCTGA+TGG + chr3_4:14119989-14120008 Msa0491430:CDS 35.0%
! CGAGTAAAACCTTTTCAGTA+TGG + chr3_4:14120346-14120365 Msa0491430:intron 35.0%
! GTAAAACCTTTTCAGTATGG+AGG + chr3_4:14120349-14120368 Msa0491430:intron 35.0%
ATGTTTCCACATGAATAGGA+CGG - chr3_4:14120412-14120431 None:intergenic 35.0%
GCTAATGTTTCCACATGAAT+AGG - chr3_4:14120416-14120435 None:intergenic 35.0%
GATTGCTCAGTTTCTTTGAT+TGG + chr3_4:14120534-14120553 Msa0491430:intron 35.0%
!! TCTTTGATTGGCTTGTTGTT+TGG + chr3_4:14120546-14120565 Msa0491430:intron 35.0%
CTATTGCATGATGTTCAACA+AGG + chr3_4:14120639-14120658 Msa0491430:intron 35.0%
GATGTTGTCAAATCTGAAGA+TGG + chr3_4:14120694-14120713 Msa0491430:CDS 35.0%
TTGTCAAATCTGAAGATGGT+GGG + chr3_4:14120698-14120717 Msa0491430:CDS 35.0%
TGCTGAAAGCAATTATCTAC+TGG + chr3_4:14120750-14120769 Msa0491430:CDS 35.0%
ACTAATTCAGAAACTCCAGA+AGG + chr3_4:14120790-14120809 Msa0491430:three_prime_UTR 35.0%
!! TTTCCTATTCTAGTTTCGGT+AGG + chr3_4:14120830-14120849 Msa0491430:intron 35.0%
TTTCCTACCGAAACTAGAAT+AGG - chr3_4:14120836-14120855 None:intergenic 35.0%
GTAGGAAACCAAAATTCGTA+GGG + chr3_4:14120848-14120867 Msa0491430:intron 35.0%
! AAACTTCTCCCTACGAATTT+TGG - chr3_4:14120859-14120878 None:intergenic 35.0%
CCATACGAATTTGTATTTCC+TGG - chr3_4:14120901-14120920 None:intergenic 35.0%
CCAGGAAATACAAATTCGTA+TGG + chr3_4:14120898-14120917 Msa0491430:intron 35.0%
GGAAATACAAATTCGTATGG+AGG + chr3_4:14120901-14120920 Msa0491430:intron 35.0%
!! TCTGCTGATTTCCTACACAA+GGG - chr3_4:14116549-14116568 None:intergenic 40.0%
ATACCTATGGACAATACTGG+CGG + chr3_4:14116589-14116608 Msa0491430:CDS 40.0%
ATGTTGCAGAAACCCTATTG+AGG - chr3_4:14116681-14116700 None:intergenic 40.0%
ATGTCATCATCTAAGAGCCT+TGG + chr3_4:14116699-14116718 Msa0491430:CDS 40.0%
AAATCTGTTTCCTCATCAGC+AGG + chr3_4:14116750-14116769 Msa0491430:CDS 40.0%
AGAGCTGCATATAAAGGATG+TGG - chr3_4:14116823-14116842 None:intergenic 40.0%
AACTGGTGATATAGTCATCG+GGG + chr3_4:14116882-14116901 Msa0491430:CDS 40.0%
! CCCACTATCAAAGATTTTCG+TGG + chr3_4:14116910-14116929 Msa0491430:CDS 40.0%
TCTCTTATCACAAAGACGCA+AGG + chr3_4:14116982-14117001 Msa0491430:CDS 40.0%
TTATGTTGACACCAGACTAC+TGG - chr3_4:14117036-14117055 None:intergenic 40.0%
CGAGATCAGTGGTAATAACA+CGG + chr3_4:14117080-14117099 Msa0491430:CDS 40.0%
GGCTGGTGGTTATACTATTA+TGG + chr3_4:14117101-14117120 Msa0491430:CDS 40.0%
CTCTTTCAGAGGAGAAATCA+TGG - chr3_4:14117170-14117189 None:intergenic 40.0%
GGTTTAGTGATTTCCTGATC+AGG - chr3_4:14117207-14117226 None:intergenic 40.0%
CCTACAGAACATGAATCATG+AGG - chr3_4:14117228-14117247 None:intergenic 40.0%
CCTCATGATTCATGTTCTGT+AGG + chr3_4:14117225-14117244 Msa0491430:CDS 40.0%
TTTGCCAACTCTTCTTTCGT+TGG - chr3_4:14117373-14117392 None:intergenic 40.0%
!!! CAAGCTTGTTTTGAGACATC+TGG - chr3_4:14117434-14117453 None:intergenic 40.0%
AAAGCTTGCGGATAACAGTA+TGG + chr3_4:14117566-14117585 Msa0491430:CDS 40.0%
AAGCTTGCGGATAACAGTAT+GGG + chr3_4:14117567-14117586 Msa0491430:CDS 40.0%
TGGGTAATTCTAATGCAGCA+TGG + chr3_4:14117586-14117605 Msa0491430:CDS 40.0%
! GTTCCTTTCAAGTGAAATCC+TGG - chr3_4:14117699-14117718 None:intergenic 40.0%
TTTCACTTGAAAGGAACTCC+GGG + chr3_4:14117702-14117721 Msa0491430:CDS 40.0%
AACAACTGCACTTTGTCCAA+CGG + chr3_4:14117882-14117901 Msa0491430:CDS 40.0%
! TAGAGAAAGGTGTATACAGG+TGG + chr3_4:14117958-14117977 Msa0491430:CDS 40.0%
TCTCTGTGAGCCATTAGATT+TGG + chr3_4:14118037-14118056 Msa0491430:CDS 40.0%
! GTGAGCCATTAGATTTGGTT+AGG + chr3_4:14118042-14118061 Msa0491430:CDS 40.0%
! ATTTGCTGGAACAACTACCA+GGG - chr3_4:14118087-14118106 None:intergenic 40.0%
!! AATTTGCTGGAACAACTACC+AGG - chr3_4:14118088-14118107 None:intergenic 40.0%
GGTAGTTGTTCCAGCAAATT+TGG + chr3_4:14118088-14118107 Msa0491430:CDS 40.0%
GATGACAACATCATAATCCC+AGG - chr3_4:14118213-14118232 None:intergenic 40.0%
TACATTTAGCCGTTTGAGTG+CGG + chr3_4:14118235-14118254 Msa0491430:CDS 40.0%
! TTAGAGCACTCTTCTTACGT+GGG - chr3_4:14118268-14118287 None:intergenic 40.0%
! ATTAGAGCACTCTTCTTACG+TGG - chr3_4:14118269-14118288 None:intergenic 40.0%
!! TAATGCAAGTGCACTGGTTT+AGG + chr3_4:14118285-14118304 Msa0491430:CDS 40.0%
! TTAGATGAAGGGCATACTCT+TGG + chr3_4:14118314-14118333 Msa0491430:CDS 40.0%
! GCAACTTGTTTGTTAAGCTC+AGG - chr3_4:14118346-14118365 None:intergenic 40.0%
TCAAATCGGTGGATACTAAC+TGG + chr3_4:14118389-14118408 Msa0491430:CDS 40.0%
! AGATGTGTAAGTTGGCTGTT+AGG - chr3_4:14118434-14118453 None:intergenic 40.0%
CACATCTACAACCATTGCTA+AGG + chr3_4:14118447-14118466 Msa0491430:CDS 40.0%
TCATGAAGGAACCTTAGCAA+TGG - chr3_4:14118461-14118480 None:intergenic 40.0%
GTCCATAAGCTTCTTCATGA+AGG - chr3_4:14118475-14118494 None:intergenic 40.0%
ACAACTTTCTTGATGCATGG+TGG - chr3_4:14118629-14118648 None:intergenic 40.0%
!! ATGAGTTGGTACTCACTGTT+CGG + chr3_4:14118687-14118706 Msa0491430:CDS 40.0%
GTCTACTGAATCCAAAACAG+TGG + chr3_4:14118756-14118775 Msa0491430:CDS 40.0%
TGGTCTAGATTCTACTTCAG+GGG + chr3_4:14118895-14118914 Msa0491430:CDS 40.0%
AAGTCTATTACCTGACACAG+TGG - chr3_4:14118958-14118977 None:intergenic 40.0%
AATTTCGTAGGTGCAAGGAA+TGG + chr3_4:14119063-14119082 Msa0491430:intron 40.0%
TCATACAAGTTATCACAGCC+AGG - chr3_4:14119170-14119189 None:intergenic 40.0%
!! CACTTTGGGTTAGGATTTTC+TGG - chr3_4:14119221-14119240 None:intergenic 40.0%
CAGAAAATCCTAACCCAAAG+TGG + chr3_4:14119219-14119238 Msa0491430:CDS 40.0%
AGGATAATTGGGATCCTGAT+TGG + chr3_4:14119383-14119402 Msa0491430:intron 40.0%
! CTAGATGTTGATTGCCAATC+AGG - chr3_4:14119400-14119419 None:intergenic 40.0%
! ACATTCCTGGAATGATGATG+CGG - chr3_4:14119551-14119570 None:intergenic 40.0%
!!! AACTTTTTCAGGGACCACAT+TGG - chr3_4:14119590-14119609 None:intergenic 40.0%
TGATACCATTAACAGCCAAC+TGG - chr3_4:14119768-14119787 None:intergenic 40.0%
CCTTGTTGCTAGAATGCATT+GGG - chr3_4:14119810-14119829 None:intergenic 40.0%
ACCTTGTTGCTAGAATGCAT+TGG - chr3_4:14119811-14119830 None:intergenic 40.0%
ATTTGAATCGTGCTGGAACT+TGG - chr3_4:14119973-14119992 None:intergenic 40.0%
CCATACAATTTGAATCGTGC+TGG - chr3_4:14119980-14119999 None:intergenic 40.0%
CCAGCACGATTCAAATTGTA+TGG + chr3_4:14119977-14119996 Msa0491430:CDS 40.0%
ATTTACCTTCTGTCCCAGAT+TGG - chr3_4:14120074-14120093 None:intergenic 40.0%
TGTTTCCACATGAATAGGAC+GGG - chr3_4:14120411-14120430 None:intergenic 40.0%
GGACAAGAAAAAGGATAGCA+GGG - chr3_4:14120604-14120623 None:intergenic 40.0%
AGGACAAGAAAAAGGATAGC+AGG - chr3_4:14120605-14120624 None:intergenic 40.0%
GTTGTCAAATCTGAAGATGG+TGG + chr3_4:14120697-14120716 Msa0491430:CDS 40.0%
TGTCAAATCTGAAGATGGTG+GGG + chr3_4:14120699-14120718 Msa0491430:CDS 40.0%
AACTCCAGAAGGTTTGTATG+TGG + chr3_4:14120801-14120820 Msa0491430:intron 40.0%
GGTAGGAAACCAAAATTCGT+AGG + chr3_4:14120847-14120866 Msa0491430:intron 40.0%
TTATGGAGGACGATTGCATT+TGG + chr3_4:14120967-14120986 Msa0491430:three_prime_UTR 40.0%
TATGGAGGACGATTGCATTT+GGG + chr3_4:14120968-14120987 Msa0491430:three_prime_UTR 40.0%
AGAGCTTATGCAGCTGTGAT+TGG + chr3_4:14116344-14116363 Msa0491430:five_prime_UTR 45.0%
TGATTTCCTACACAAGGGGA+AGG - chr3_4:14116544-14116563 None:intergenic 45.0%
!! CTGCTGATTTCCTACACAAG+GGG - chr3_4:14116548-14116567 None:intergenic 45.0%
!! CTCTGCTGATTTCCTACACA+AGG - chr3_4:14116550-14116569 None:intergenic 45.0%
AAACCCTATTGAGGTCCAGT+GGG - chr3_4:14116672-14116691 None:intergenic 45.0%
AGGAATTACTGAAGCAGCCA+AGG - chr3_4:14116719-14116738 None:intergenic 45.0%
GCAGCTCTATCAACTGATGA+TGG + chr3_4:14116835-14116854 Msa0491430:CDS 45.0%
! GGAATGTTTTGTGATGAGCC+TGG + chr3_4:14116934-14116953 Msa0491430:CDS 45.0%
! TTTTGTGATGAGCCTGGCTT+GGG + chr3_4:14116940-14116959 Msa0491430:CDS 45.0%
CACAAAGACGCAAGGTACAT+TGG + chr3_4:14116990-14117009 Msa0491430:CDS 45.0%
AAAGACGCAAGGTACATTGG+CGG + chr3_4:14116993-14117012 Msa0491430:CDS 45.0%
TGTGGCTATTACGAGATCAG+TGG + chr3_4:14117069-14117088 Msa0491430:CDS 45.0%
ATCAGTGGTAATAACACGGC+TGG + chr3_4:14117084-14117103 Msa0491430:CDS 45.0%
TATTCCTCAGAGCAAGCATC+AGG - chr3_4:14117267-14117286 None:intergenic 45.0%
! GTTCTGGACAGAGTTACAAG+TGG + chr3_4:14117469-14117488 Msa0491430:CDS 45.0%
GACAGAGTTACAAGTGGCAT+GGG + chr3_4:14117475-14117494 Msa0491430:CDS 45.0%
! GTTTGGAGTACAGTGATACG+TGG + chr3_4:14117514-14117533 Msa0491430:CDS 45.0%
TCACAAATGGCGAAAGCTTG+CGG + chr3_4:14117554-14117573 Msa0491430:CDS 45.0%
!!! ACGTTTTGTTTCTCACCACC+CGG - chr3_4:14117723-14117742 None:intergenic 45.0%
!! GCTTAAGGAGCACTACTCAT+TGG + chr3_4:14117761-14117780 Msa0491430:CDS 45.0%
GGTAAATTCTCGGACAAAGG+AGG + chr3_4:14117782-14117801 Msa0491430:CDS 45.0%
ACAACTGCACTTTGTCCAAC+GGG + chr3_4:14117883-14117902 Msa0491430:CDS 45.0%
ATACTTGTCAAGAGCAACCC+TGG + chr3_4:14118067-14118086 Msa0491430:CDS 45.0%
! ATAGAAAAGCATGTCAGGCC+TGG + chr3_4:14118131-14118150 Msa0491430:CDS 45.0%
! CATTGGTTGCTTCAAATCGG+TGG + chr3_4:14118378-14118397 Msa0491430:CDS 45.0%
!! CTGTTAGGAGTGTTCGATGT+TGG - chr3_4:14118419-14118438 None:intergenic 45.0%
TTGGAATGATCCTTCGCATG+TGG + chr3_4:14118730-14118749 Msa0491430:CDS 45.0%
AGTAGACTTTCCACATGCGA+AGG - chr3_4:14118743-14118762 None:intergenic 45.0%
ACACGCTGGAGAAGATATTC+AGG + chr3_4:14118847-14118866 Msa0491430:CDS 45.0%
CAGGAGACTGTATCTTATGG+AGG - chr3_4:14118927-14118946 None:intergenic 45.0%
AGATACAGTCTCCTGTTTGG+TGG + chr3_4:14118932-14118951 Msa0491430:CDS 45.0%
AAGGCGTAATGAAAGGGAGT+CGG - chr3_4:14119091-14119110 None:intergenic 45.0%
GTCGACAAGGCGTAATGAAA+GGG - chr3_4:14119097-14119116 None:intergenic 45.0%
TGTCGACAAGGCGTAATGAA+AGG - chr3_4:14119098-14119117 None:intergenic 45.0%
AGGCACAACATATGTCGACA+AGG - chr3_4:14119110-14119129 None:intergenic 45.0%
GTTACAACCTTCTTATGCGC+AGG + chr3_4:14119265-14119284 Msa0491430:CDS 45.0%
AAGTTGCATATCTCGTCCAG+AGG + chr3_4:14119425-14119444 Msa0491430:CDS 45.0%
CAGAGGTTGAAAGCTTTGCA+GGG + chr3_4:14119442-14119461 Msa0491430:CDS 45.0%
TCATTCCGCATCATCATTCC+AGG + chr3_4:14119543-14119562 Msa0491430:CDS 45.0%
CCCAATGCATTCTAGCAACA+AGG + chr3_4:14119807-14119826 Msa0491430:CDS 45.0%
TGTATGGCACTTCTGATGGA+TGG + chr3_4:14119993-14120012 Msa0491430:CDS 45.0%
! GTATGGCACTTCTGATGGAT+GGG + chr3_4:14119994-14120013 Msa0491430:CDS 45.0%
!! AGCTGTTTTGCTAAAGGCGT+AGG + chr3_4:14120134-14120153 Msa0491430:intron 45.0%
!! GCTGTTTTGCTAAAGGCGTA+GGG + chr3_4:14120135-14120154 Msa0491430:intron 45.0%
! GCTAAAGGCGTAGGGATAAA+TGG + chr3_4:14120143-14120162 Msa0491430:intron 45.0%
CATCCACCAAATTGGGCAAA+CGG - chr3_4:14120272-14120291 None:intergenic 45.0%
TAGGAGCCATCCACCAAATT+GGG - chr3_4:14120279-14120298 None:intergenic 45.0%
CTTGCTCCTCCATACTGAAA+AGG - chr3_4:14120358-14120377 None:intergenic 45.0%
AATTAGTCGTGCCCATCGTA+TGG + chr3_4:14120379-14120398 Msa0491430:CDS 45.0%
ATTAGTCGTGCCCATCGTAT+GGG + chr3_4:14120380-14120399 Msa0491430:CDS 45.0%
GTGGAAACATTAGCTATGCG+TGG + chr3_4:14120422-14120441 Msa0491430:CDS 45.0%
! GTCAAATCTGAAGATGGTGG+GGG + chr3_4:14120700-14120719 Msa0491430:CDS 45.0%
GCTACCACATACAAACCTTC+TGG - chr3_4:14120808-14120827 None:intergenic 45.0%
ATGGAGGACGATTGCATTTG+GGG + chr3_4:14120969-14120988 Msa0491430:three_prime_UTR 45.0%
TGAGCGGTTCTTCAAGGGAA+AGG + chr3_4:14116485-14116504 Msa0491430:CDS 50.0%
TCCTACACAAGGGGAAGGTA+CGG - chr3_4:14116539-14116558 None:intergenic 50.0%
GATCCGCCAGTATTGTCCAT+AGG - chr3_4:14116595-14116614 None:intergenic 50.0%
! ATGGACAATACTGGCGGATC+TGG + chr3_4:14116595-14116614 Msa0491430:CDS 50.0%
! TGGACAATACTGGCGGATCT+GGG + chr3_4:14116596-14116615 Msa0491430:CDS 50.0%
! ATACTGGCGGATCTGGGATT+TGG + chr3_4:14116602-14116621 Msa0491430:CDS 50.0%
! TACTGGCGGATCTGGGATTT+GGG + chr3_4:14116603-14116622 Msa0491430:CDS 50.0%
GAAACCCTATTGAGGTCCAG+TGG - chr3_4:14116673-14116692 None:intergenic 50.0%
ATCAGCAGGCAGCAGTTGAA+TGG + chr3_4:14116764-14116783 Msa0491430:CDS 50.0%
! GTTTTGTGATGAGCCTGGCT+TGG + chr3_4:14116939-14116958 Msa0491430:CDS 50.0%
GTTACAGTCTTACCCAAGCC+AGG - chr3_4:14116955-14116974 None:intergenic 50.0%
AGTGGTAATAACACGGCTGG+TGG + chr3_4:14117087-14117106 Msa0491430:CDS 50.0%
AGGGATGTGTGCCAAGATTC+AGG + chr3_4:14117129-14117148 Msa0491430:CDS 50.0%
AGGAATATTCGCCTGCGAGT+CGG + chr3_4:14117280-14117299 Msa0491430:CDS 50.0%
GGACAGAGTTACAAGTGGCA+TGG + chr3_4:14117474-14117493 Msa0491430:CDS 50.0%
!! AAAGGAGGCTCTGACTTGGT+TGG + chr3_4:14117797-14117816 Msa0491430:CDS 50.0%
GTATGGATTCACAGTCCCGT+TGG - chr3_4:14117901-14117920 None:intergenic 50.0%
! ACTTTTGATGTGGCTGCCCT+TGG + chr3_4:14118008-14118027 Msa0491430:CDS 50.0%
CTCACAGAGAGCCATACCAA+GGG - chr3_4:14118027-14118046 None:intergenic 50.0%
GTGCTCTAATGCAAGTGCAC+TGG + chr3_4:14118279-14118298 Msa0491430:CDS 50.0%
TCTTCCATCTCTGCCTCGAA+TGG - chr3_4:14118533-14118552 None:intergenic 50.0%
TTCGAGGCAGAGATGGAAGA+AGG + chr3_4:14118533-14118552 Msa0491430:CDS 50.0%
AGGCAGAGATGGAAGAAGGT+CGG + chr3_4:14118537-14118556 Msa0491430:CDS 50.0%
AGGCTTTCATGCTGTGTTGC+TGG + chr3_4:14118809-14118828 Msa0491430:CDS 50.0%
! GGTACAGACCACTTTGGGTT+AGG - chr3_4:14119230-14119249 None:intergenic 50.0%
CTTGGGGTACAGACCACTTT+GGG - chr3_4:14119235-14119254 None:intergenic 50.0%
TCTTGGGGTACAGACCACTT+TGG - chr3_4:14119236-14119255 None:intergenic 50.0%
AACCTTCTTATGCGCAGGCA+TGG + chr3_4:14119270-14119289 Msa0491430:CDS 50.0%
CCTGCAAAGCTTTCAACCTC+TGG - chr3_4:14119444-14119463 None:intergenic 50.0%
CCAGAGGTTGAAAGCTTTGC+AGG + chr3_4:14119441-14119460 Msa0491430:CDS 50.0%
! GCGGAATGACTTGTGTGCAA+AGG - chr3_4:14119532-14119551 None:intergenic 50.0%
!! ATGGATGGGAGTGCTGCATT+GGG + chr3_4:14120008-14120027 Msa0491430:CDS 50.0%
GATCCTCCGTTTGCCCAATT+TGG + chr3_4:14120263-14120282 Msa0491430:intron 50.0%
! CGTTTGCCCAATTTGGTGGA+TGG + chr3_4:14120270-14120289 Msa0491430:intron 50.0%
GTAGGAGCCATCCACCAAAT+TGG - chr3_4:14120280-14120299 None:intergenic 50.0%
AAGCTCCATTCCCCTGTGAG+CGG + chr3_4:14116469-14116488 Msa0491430:CDS 55.0%
AAGAACCGCTCACAGGGGAA+TGG - chr3_4:14116477-14116496 None:intergenic 55.0%
CCTTGAAGAACCGCTCACAG+GGG - chr3_4:14116482-14116501 None:intergenic 55.0%
CCCTTGAAGAACCGCTCACA+GGG - chr3_4:14116483-14116502 None:intergenic 55.0%
CCCTGTGAGCGGTTCTTCAA+GGG + chr3_4:14116480-14116499 Msa0491430:CDS 55.0%
TCCCTTGAAGAACCGCTCAC+AGG - chr3_4:14116484-14116503 None:intergenic 55.0%
ACCGTACCTTCCCCTTGTGT+AGG + chr3_4:14116535-14116554 Msa0491430:CDS 55.0%
TCTATATTCCCTGGGCCCAC+TGG + chr3_4:14116654-14116673 Msa0491430:CDS 55.0%
TCAACTGCTGCCTGCTGATG+AGG - chr3_4:14116763-14116782 None:intergenic 55.0%
! ACATTGGCGGATCCACCAGA+TGG + chr3_4:14117006-14117025 Msa0491430:CDS 55.0%
! CATTGGCGGATCCACCAGAT+GGG + chr3_4:14117007-14117026 Msa0491430:CDS 55.0%
ACTACTGGTGACCCATCTGG+TGG - chr3_4:14117021-14117040 None:intergenic 55.0%
CAGACTACTGGTGACCCATC+TGG - chr3_4:14117024-14117043 None:intergenic 55.0%
CAGATGGGTCACCAGTAGTC+TGG + chr3_4:14117022-14117041 Msa0491430:CDS 55.0%
ACCTCCTGATGCTTGCTCTG+AGG + chr3_4:14117260-14117279 Msa0491430:CDS 55.0%
TCCTCAGAGCAAGCATCAGG+AGG - chr3_4:14117264-14117283 None:intergenic 55.0%
CACTTGAAAGGAACTCCGGG+TGG + chr3_4:14117705-14117724 Msa0491430:CDS 55.0%
! GGACAAAGGAGGCTCTGACT+TGG + chr3_4:14117793-14117812 Msa0491430:CDS 55.0%
TGATGTGGCTGCCCTTGGTA+TGG + chr3_4:14118013-14118032 Msa0491430:CDS 55.0%
GCTCACAGAGAGCCATACCA+AGG - chr3_4:14118028-14118047 None:intergenic 55.0%
TTAGCCGTTTGAGTGCGGAG+TGG + chr3_4:14118240-14118259 Msa0491430:CDS 55.0%
TAGCCGTTTGAGTGCGGAGT+GGG + chr3_4:14118241-14118260 Msa0491430:CDS 55.0%
TAGGCCATTCGAGGCAGAGA+TGG + chr3_4:14118526-14118545 Msa0491430:CDS 55.0%
TGACACAGTGGCCACCAAAC+AGG - chr3_4:14118946-14118965 None:intergenic 55.0%
! TGTTTGGTGGCCACTGTGTC+AGG + chr3_4:14118945-14118964 Msa0491430:CDS 55.0%
AGCCATGCCTGCGCATAAGA+AGG - chr3_4:14119275-14119294 None:intergenic 55.0%
!! GATGGATGGGAGTGCTGCAT+TGG + chr3_4:14120007-14120026 Msa0491430:CDS 55.0%
! TGGAGCCAATCTGGGACAGA+AGG + chr3_4:14120066-14120085 Msa0491430:CDS 55.0%
CCACCAAATTGGGCAAACGG+AGG - chr3_4:14120269-14120288 None:intergenic 55.0%
CCTCCGTTTGCCCAATTTGG+TGG + chr3_4:14120266-14120285 Msa0491430:intron 55.0%
TGCGTCCCGTCCTATTCATG+TGG + chr3_4:14120403-14120422 Msa0491430:CDS 55.0%
CCCCTGTGAGCGGTTCTTCA+AGG + chr3_4:14116479-14116498 Msa0491430:CDS 60.0%
ATTGAGGTCCAGTGGGCCCA+GGG - chr3_4:14116665-14116684 None:intergenic 60.0%
TATTGAGGTCCAGTGGGCCC+AGG - chr3_4:14116666-14116685 None:intergenic 60.0%
TGGGCCCACTGGACCTCAAT+AGG + chr3_4:14116665-14116684 Msa0491430:CDS 60.0%
GGGCCCACTGGACCTCAATA+GGG + chr3_4:14116666-14116685 Msa0491430:CDS 60.0%
!! CTTCTAGTGCACCGACTCGC+AGG - chr3_4:14117294-14117313 None:intergenic 60.0%
ATCTGCGCACTCGCTTGCCT+GGG + chr3_4:14118193-14118212 Msa0491430:CDS 60.0%
AGCCGTTTGAGTGCGGAGTG+GGG + chr3_4:14118242-14118261 Msa0491430:CDS 60.0%
CATGGGATGCTGGCGTGCTT+AGG + chr3_4:14118507-14118526 Msa0491430:CDS 60.0%
TGGCGTGCTTAGGCCATTCG+AGG + chr3_4:14118517-14118536 Msa0491430:CDS 60.0%
ACGGGACGCACCCATACGAT+GGG - chr3_4:14120393-14120412 None:intergenic 60.0%
!! TCTGAAGATGGTGGGGGACG+AGG + chr3_4:14120706-14120725 Msa0491430:CDS 60.0%
!! CTGAAGATGGTGGGGGACGA+GGG + chr3_4:14120707-14120726 Msa0491430:CDS 60.0%
CAGGCAAGCGAGTGCGCAGA+TGG - chr3_4:14118194-14118213 None:intergenic 65.0%
CATCTGCGCACTCGCTTGCC+TGG + chr3_4:14118192-14118211 Msa0491430:CDS 65.0%
GGCCCCACTCCGCACTCAAA+CGG - chr3_4:14118247-14118266 None:intergenic 65.0%
GACGGGACGCACCCATACGA+TGG - chr3_4:14120394-14120413 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 14116341 14121105 14116341 ID=Msa0491430;Name=Msa0491430
chr3_4 mRNA 14116341 14121105 14116341 ID=Msa0491430-mRNA-1;Parent=Msa0491430;Name=Msa0491430-mRNA-1;_AED=0.03;_eAED=0.03;_QI=41|0.85|0.87|1|0.85|0.87|8|226|1176
chr3_4 exon 14116341 14118966 14116341 ID=Msa0491430-mRNA-1:exon:4159;Parent=Msa0491430-mRNA-1
chr3_4 exon 14119073 14119310 14119073 ID=Msa0491430-mRNA-1:exon:4160;Parent=Msa0491430-mRNA-1
chr3_4 exon 14119385 14119657 14119385 ID=Msa0491430-mRNA-1:exon:4161;Parent=Msa0491430-mRNA-1
chr3_4 exon 14119769 14119828 14119769 ID=Msa0491430-mRNA-1:exon:4162;Parent=Msa0491430-mRNA-1
chr3_4 exon 14119957 14120087 14119957 ID=Msa0491430-mRNA-1:exon:4163;Parent=Msa0491430-mRNA-1
chr3_4 exon 14120364 14120478 14120364 ID=Msa0491430-mRNA-1:exon:4164;Parent=Msa0491430-mRNA-1
chr3_4 exon 14120661 14120811 14120661 ID=Msa0491430-mRNA-1:exon:4165;Parent=Msa0491430-mRNA-1
chr3_4 exon 14120902 14121105 14120902 ID=Msa0491430-mRNA-1:exon:4166;Parent=Msa0491430-mRNA-1
chr3_4 five_prime_UTR 14116341 14116381 14116341 ID=Msa0491430-mRNA-1:five_prime_utr;Parent=Msa0491430-mRNA-1
chr3_4 CDS 14116382 14118966 14116382 ID=Msa0491430-mRNA-1:cds;Parent=Msa0491430-mRNA-1
chr3_4 CDS 14119073 14119310 14119073 ID=Msa0491430-mRNA-1:cds;Parent=Msa0491430-mRNA-1
chr3_4 CDS 14119385 14119657 14119385 ID=Msa0491430-mRNA-1:cds;Parent=Msa0491430-mRNA-1
chr3_4 CDS 14119769 14119828 14119769 ID=Msa0491430-mRNA-1:cds;Parent=Msa0491430-mRNA-1
chr3_4 CDS 14119957 14120087 14119957 ID=Msa0491430-mRNA-1:cds;Parent=Msa0491430-mRNA-1
chr3_4 CDS 14120364 14120478 14120364 ID=Msa0491430-mRNA-1:cds;Parent=Msa0491430-mRNA-1
chr3_4 CDS 14120661 14120789 14120661 ID=Msa0491430-mRNA-1:cds;Parent=Msa0491430-mRNA-1
chr3_4 three_prime_UTR 14120790 14120811 14120790 ID=Msa0491430-mRNA-1:three_prime_utr;Parent=Msa0491430-mRNA-1
chr3_4 three_prime_UTR 14120902 14121105 14120902 ID=Msa0491430-mRNA-1:three_prime_utr;Parent=Msa0491430-mRNA-1
Gene Sequence

>Msa0491430

ATGCTTTCTGATCCAGACTACTGTAGAAAGATACTTGGAGAAAATGAGAGCATTTGGAATCTTTCTGATTGTCATGTACTTAGTTGCAAGCTCCATTCCCCTGTGAGCGGTTCTTCAAGGGAAAGGCTATTTGAACTTCATGAAATTTTTAAGACCGTACCTTCCCCTTGTGTAGGAAATCAGCAGAGCTTTCTTATTTCCAAGATAATACCTATGGACAATACTGGCGGATCTGGGATTTGGGATATCTCTGATGATATTTTAATTAAAATTCTATATTCCCTGGGCCCACTGGACCTCAATAGGGTTTCTGCAACATGTCATCATCTAAGAGCCTTGGCTGCTTCAGTAATTCCTTGCACAAAGTTAAATCTGTTTCCTCATCAGCAGGCAGCAGTTGAATGGATGTTGCAACGTGAACGAAATGCTGAACTTATGCCACATCCTTTATATGCAGCTCTATCAACTGATGATGGCTTTAGTTTCCATGTAAATACTGTAACTGGTGATATAGTCATCGGGGAAACTCCCACTATCAAAGATTTTCGTGGAGGAATGTTTTGTGATGAGCCTGGCTTGGGTAAGACTGTAACAGCTCTTTCTCTTATCACAAAGACGCAAGGTACATTGGCGGATCCACCAGATGGGTCACCAGTAGTCTGGTGTCAACATAACACTAACAAAAAATGTGGCTATTACGAGATCAGTGGTAATAACACGGCTGGTGGTTATACTATTATGGGTAAGAGGGATGTGTGCCAAGATTCAGGTAGAAGTAATGAGAACCATGATTTCTCCTCTGAAAGAGCCAAATTGTTAAATCCTGATCAGGAAATCACTAAACCTCATGATTCATGTTCTGTAGGAGAAGACAAATCACCTCCTGATGCTTGCTCTGAGGAATATTCGCCTGCGAGTCGGTGCACTAGAAGCTTGAGTCGCGTAAAGAAAAATCTATATTTCACAGATGACGAGGAAGCTATGATTTCCAACGAAAGAAGAGTTGGCAAAAGACCAATTAAAACAAAACATGCATCAGATGTTGCATCCCAGATGTCTCAAAACAAGCTTGTTGATACTTCATATGGTTCTGGACAGAGTTACAAGTGGCATGGGAAGCGTAAAGTTGATTGTTTGGAGTACAGTGATACGTGGATTCAATGTGATGCTTGTCACAAATGGCGAAAGCTTGCGGATAACAGTATGGGTAATTCTAATGCAGCATGGTTTTGTAGTATGAACACTGACCCTTTGTATCAGAGTTGTAGAGTTCCAGAACAGTCTTTTAAGAACAGCTCTAAGATAACTTACTTACCAGGATTTCACTTGAAAGGAACTCCGGGTGGTGAGAAACAAAACGTTTCATTTTTCACTAGTGTGCTTAAGGAGCACTACTCATTGGTAAATTCTCGGACAAAGGAGGCTCTGACTTGGTTGGCCAAAATTTCTATTGACAAGCTTGCAGAAATGGAAACAAATGGAATACGAAGTCCTATTTTAAACAACTGCACTTTGTCCAACGGGACTGTGAATCCATACCACAAAGTATTTCAAGCATTTGGCCTAAAAAAGAAAGTAGAGAAAGGTGTATACAGGTGGTTCTACCCAAAAAATCTTAAAAATTTGACTTTTGATGTGGCTGCCCTTGGTATGGCTCTCTGTGAGCCATTAGATTTGGTTAGGTTATACTTGTCAAGAGCAACCCTGGTAGTTGTTCCAGCAAATTTGGTTGATCATTGGAAAGCACAAATAGAAAAGCATGTCAGGCCTGGTCAATTGCATGTTTATGTTTGGAACGATCATCGGAAACCATCTGCGCACTCGCTTGCCTGGGATTATGATGTTGTCATCACTACATTTAGCCGTTTGAGTGCGGAGTGGGGCCCACGTAAGAAGAGTGCTCTAATGCAAGTGCACTGGTTTAGGATAATTTTAGATGAAGGGCATACTCTTGGCTCAAGCCTGAGCTTAACAAACAAGTTGCAAATGACTATTTCATTGGTTGCTTCAAATCGGTGGATACTAACTGGAACTCCAACATCGAACACTCCTAACAGCCAACTTACACATCTACAACCATTGCTAAGGTTCCTTCATGAAGAAGCTTATGGACTGAATCAAAAATCATGGGATGCTGGCGTGCTTAGGCCATTCGAGGCAGAGATGGAAGAAGGTCGGTCTCGTCTGTTGCATTTACTTCAGAAATGCATGATTAGTGCTAGAAAGGCAGATTTGCAAAGTATTCCACCATGCATCAAGAAAGTTGTTTTACTAGATTTTAATGAGGAACATGCTAGAAGTTACAATGAGTTGGTACTCACTGTTCGGCGTAATATATTGATGGCTGATTGGAATGATCCTTCGCATGTGGAAAGTCTACTGAATCCAAAACAGTGGAAATTTCGTAGTGGAGCTATAAAAAATGTAAGGCTTTCATGCTGTGTTGCTGGACATATTAAAGTTACACACGCTGGAGAAGATATTCAGGAAACAATGGATATGTTAGTGAAAAATGGTCTAGATTCTACTTCAGGGGAGTATACCTCCATAAGATACAGTCTCCTGTTTGGTGGCCACTGTGTCAGGTGCAAGGAATGGTGCCGACTCCCTTTCATTACGCCTTGTCGACATATGTTGTGCCTTGATTGTGTTTCCATTGACAAGACAAAGTGTACATATCCTGGCTGTGATAACTTGTATGAGATGCAAAGTCTTGATTCAATGGCACGGCCAGAAAATCCTAACCCAAAGTGGTCTGTACCCCAAGATCTTATTGAGTTACAACCTTCTTATGCGCAGGCATGGCTTTTAATTGAGAAATCAGATAATTGGGATCCTGATTGGCAATCAACATCTAGTAGTAAAGTTGCATATCTCGTCCAGAGGTTGAAAGCTTTGCAGGGAATCAATGAAGAGATGAGTTCATATACTGACAATAGCAATGCGATGTATATTGAAAATAGTTTTCCTTTGCACACAAGTCATTCCGCATCATCATTCCAGGAATGTTCAAGTAGCATTAGTACCAATGTGGTCCCTGAAAAAGTTTTGATATTTTCTCAGTTTCTTGAGCATATACATGTCATTGAACAACAGTTGGCTGTTAATGGTATCAAATATACTGGAATGTATAACCCAATGCATTCTAGCAACAAGAAGAAGTCATTAGCCAAGTTCCAGCACGATTCAAATTGTATGGCACTTCTGATGGATGGGAGTGCTGCATTGGGTCTTGACTTAAGTTTTGTTACACATGTATTTTTAATGGAGCCAATCTGGGACAGAAGTATGGAGGAGCAAGTAATTAGTCGTGCCCATCGTATGGGTGCGTCCCGTCCTATTCATGTGGAAACATTAGCTATGCGTGGTACAATTGAAGAGCAAATGCTAGAATTTTTACAGGATGCTGACAAACGTAGAAGATTTCATAATAAAGATGTTGTCAAATCTGAAGATGGTGGGGGACGAGGGTGTCGATCAGTGCATGATTTTGCTGAAAGCAATTATCTACTGGAACTTAAATTTGTATAA
Protein sequence

>Msa0491430

MLSDPDYCRKILGENESIWNLSDCHVLSCKLHSPVSGSSRERLFELHEIFKTVPSPCVGNQQSFLISKIIPMDNTGGSGIWDISDDILIKILYSLGPLDLNRVSATCHHLRALAASVIPCTKLNLFPHQQAAVEWMLQRERNAELMPHPLYAALSTDDGFSFHVNTVTGDIVIGETPTIKDFRGGMFCDEPGLGKTVTALSLITKTQGTLADPPDGSPVVWCQHNTNKKCGYYEISGNNTAGGYTIMGKRDVCQDSGRSNENHDFSSERAKLLNPDQEITKPHDSCSVGEDKSPPDACSEEYSPASRCTRSLSRVKKNLYFTDDEEAMISNERRVGKRPIKTKHASDVASQMSQNKLVDTSYGSGQSYKWHGKRKVDCLEYSDTWIQCDACHKWRKLADNSMGNSNAAWFCSMNTDPLYQSCRVPEQSFKNSSKITYLPGFHLKGTPGGEKQNVSFFTSVLKEHYSLVNSRTKEALTWLAKISIDKLAEMETNGIRSPILNNCTLSNGTVNPYHKVFQAFGLKKKVEKGVYRWFYPKNLKNLTFDVAALGMALCEPLDLVRLYLSRATLVVVPANLVDHWKAQIEKHVRPGQLHVYVWNDHRKPSAHSLAWDYDVVITTFSRLSAEWGPRKKSALMQVHWFRIILDEGHTLGSSLSLTNKLQMTISLVASNRWILTGTPTSNTPNSQLTHLQPLLRFLHEEAYGLNQKSWDAGVLRPFEAEMEEGRSRLLHLLQKCMISARKADLQSIPPCIKKVVLLDFNEEHARSYNELVLTVRRNILMADWNDPSHVESLLNPKQWKFRSGAIKNVRLSCCVAGHIKVTHAGEDIQETMDMLVKNGLDSTSGEYTSIRYSLLFGGHCVRCKEWCRLPFITPCRHMLCLDCVSIDKTKCTYPGCDNLYEMQSLDSMARPENPNPKWSVPQDLIELQPSYAQAWLLIEKSDNWDPDWQSTSSSKVAYLVQRLKALQGINEEMSSYTDNSNAMYIENSFPLHTSHSASSFQECSSSISTNVVPEKVLIFSQFLEHIHVIEQQLAVNGIKYTGMYNPMHSSNKKKSLAKFQHDSNCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGASRPIHVETLAMRGTIEEQMLEFLQDADKRRRFHNKDVVKSEDGGGRGCRSVHDFAESNYLLELKFV*