Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494550 | XP_003625028.1 | 83.333 | 258 | 20 | 1 | 1 | 235 | 1 | 258 | 9.06e-156 | 443 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494550 | sp|Q55EX9|Y8948_DICDI | 26.616 | 263 | 148 | 8 | 5 | 236 | 15 | 263 | 5.92e-21 | 91.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494550 | A2Q2Z0 | 83.333 | 258 | 20 | 1 | 1 | 235 | 1 | 258 | 4.33e-156 | 443 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0284450 | Msa0494550 | 0.808312 | 3.295300e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494550 | MtrunA17_Chr7g0256451 | 83.333 | 258 | 20 | 1 | 1 | 235 | 1 | 258 | 8.33e-160 | 443 |
| Msa0494550 | MtrunA17_Chr7g0257521 | 64.865 | 259 | 68 | 1 | 1 | 236 | 1 | 259 | 5.55e-124 | 352 |
| Msa0494550 | MtrunA17_Chr7g0256471 | 90.909 | 176 | 16 | 0 | 60 | 235 | 8 | 183 | 5.73e-119 | 337 |
| Msa0494550 | MtrunA17_Chr7g0257511 | 55.439 | 285 | 59 | 3 | 1 | 235 | 1 | 267 | 3.12e-105 | 305 |
| Msa0494550 | MtrunA17_Chr7g0256461 | 98.039 | 51 | 1 | 0 | 1 | 51 | 1 | 51 | 2.06e-30 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494550 | AT2G41380.1 | 50.000 | 264 | 103 | 3 | 1 | 235 | 1 | 264 | 2.57e-88 | 263 |
| Msa0494550 | AT5G10830.1 | 35.249 | 261 | 145 | 2 | 1 | 237 | 1 | 261 | 2.02e-51 | 168 |
| Msa0494550 | AT4G22530.1 | 33.721 | 258 | 135 | 6 | 1 | 229 | 1 | 251 | 8.17e-47 | 156 |
| Msa0494550 | AT4G22530.2 | 33.721 | 258 | 135 | 6 | 1 | 229 | 1 | 251 | 8.17e-47 | 156 |
| Msa0494550 | AT3G61210.1 | 33.462 | 260 | 146 | 4 | 1 | 235 | 4 | 261 | 1.75e-45 | 153 |
| Msa0494550 | AT3G54150.2 | 33.462 | 260 | 146 | 4 | 1 | 235 | 1 | 258 | 1.82e-45 | 153 |
| Msa0494550 | AT3G54150.1 | 33.462 | 260 | 146 | 4 | 1 | 235 | 1 | 258 | 1.22e-44 | 152 |
| Msa0494550 | AT1G55450.1 | 33.712 | 264 | 148 | 4 | 1 | 239 | 1 | 262 | 3.27e-43 | 149 |
| Msa0494550 | AT1G55450.2 | 32.234 | 273 | 149 | 4 | 1 | 239 | 1 | 271 | 3.09e-41 | 144 |
Find 64 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACTTGTTCATAGAAATT+TGG | 0.137606 | 3_4:+22765380 | None:intergenic |
| CTCCCTCTCACAACCTTGTT+TGG | 0.234317 | 3_4:-22766616 | Msa0494550:CDS |
| GTGTGTTTGTATTGCACATT+AGG | 0.273438 | 3_4:+22765503 | None:intergenic |
| TGACTTGTTCATAGAAATTT+GGG | 0.304263 | 3_4:+22765381 | None:intergenic |
| TCTACTTCATCACTAATTCT+TGG | 0.306205 | 3_4:+22765305 | None:intergenic |
| CTTCCAATTCTCAGATAAAC+TGG | 0.314828 | 3_4:+22764978 | None:intergenic |
| TTTCCAGTTTATCTGAGAAT+TGG | 0.340888 | 3_4:-22764981 | Msa0494550:CDS |
| CCATTGCTCAAGGCCTTCAT+TGG | 0.361075 | 3_4:-22765412 | Msa0494550:CDS |
| GACAGAGAGATTGATGAGTT+TGG | 0.366857 | 3_4:-22765138 | Msa0494550:CDS |
| GAGAGGGGTGTGGAGCTTCT+TGG | 0.372448 | 3_4:-22765065 | Msa0494550:CDS |
| AGGGAGCGAACTTACAGATT+TGG | 0.374229 | 3_4:+22766565 | None:intergenic |
| TCCCTCTCACAACCTTGTTT+GGG | 0.378336 | 3_4:-22766615 | Msa0494550:CDS |
| CTCTCTGTCACAAACTGAAA+TGG | 0.388200 | 3_4:+22765152 | None:intergenic |
| AGCAATGGTCACAAGGTCTA+TGG | 0.404104 | 3_4:+22765427 | None:intergenic |
| ATTTCTATGAACAAGTCAAA+TGG | 0.408253 | 3_4:-22765376 | Msa0494550:CDS |
| GAGTGGAAATGTCTGAATAC+AGG | 0.425186 | 3_4:-22764956 | Msa0494550:CDS |
| TGTTAACTTTAATAAAATCA+TGG | 0.428826 | 3_4:-22765109 | Msa0494550:CDS |
| TTTGGCGGCTTGGCCACTTC+CGG | 0.434668 | 3_4:+22766583 | None:intergenic |
| TGTGTTTGTATTGCACATTA+GGG | 0.453706 | 3_4:+22765504 | None:intergenic |
| AACTTACAGATTTGGCGGCT+TGG | 0.455330 | 3_4:+22766573 | None:intergenic |
| AAGCTTGCTTGGGGTGAAGA+TGG | 0.458816 | 3_4:-22765020 | Msa0494550:CDS |
| AATGTCTGAATACAGGGAAA+TGG | 0.465405 | 3_4:-22764949 | Msa0494550:CDS |
| ACTCCATCCACTGCCTCAAA+AGG | 0.467815 | 3_4:+22765188 | None:intergenic |
| GACAGCAAAGGAGAGGGGTG+TGG | 0.481153 | 3_4:-22765075 | Msa0494550:CDS |
| TTTCTATGAACAAGTCAAAT+GGG | 0.481205 | 3_4:-22765375 | Msa0494550:CDS |
| AAGAGTTGTGGTGGATAACT+TGG | 0.490769 | 3_4:+22766659 | None:intergenic |
| TGGGATGTTGCTACCGGAAG+TGG | 0.494992 | 3_4:-22766596 | Msa0494550:CDS |
| GTTACAATTTGTTCAACCTC+GGG | 0.499141 | 3_4:+22765461 | None:intergenic |
| TCTCAGATAAACTGGAAACT+TGG | 0.500338 | 3_4:+22764986 | None:intergenic |
| AATTTGTTCAACCTCGGGAA+TGG | 0.501401 | 3_4:+22765466 | None:intergenic |
| GAGCGAACTTACAGATTTGG+CGG | 0.506617 | 3_4:+22766568 | None:intergenic |
| AAATCAAATAGAGTTATAGA+TGG | 0.521069 | 3_4:-22766726 | Msa0494550:exon |
| GAGAGATTGATGAGTTTGGA+TGG | 0.522539 | 3_4:-22765134 | Msa0494550:CDS |
| TCGGGAATGGACATTGTTGA+AGG | 0.527152 | 3_4:+22765479 | None:intergenic |
| CTCATGGAGTCATTGCTGCT+TGG | 0.538560 | 3_4:-22765340 | Msa0494550:CDS |
| CTTGTTTGGGATGTTGCTAC+CGG | 0.539070 | 3_4:-22766602 | Msa0494550:CDS |
| TTGGGAGGTCAAACCAATGA+AGG | 0.542079 | 3_4:+22765399 | None:intergenic |
| TTATCAGACAGCAAAGGAGA+GGG | 0.550722 | 3_4:-22765081 | Msa0494550:CDS |
| CGGGAATGGACATTGTTGAA+GGG | 0.551066 | 3_4:+22765480 | None:intergenic |
| TGTTACAATTTGTTCAACCT+CGG | 0.554611 | 3_4:+22765460 | None:intergenic |
| TGGGTACTCAAGAAACCTCA+TGG | 0.560111 | 3_4:-22765356 | Msa0494550:CDS |
| GTGGATGGAGTTGATCATAC+AGG | 0.561820 | 3_4:-22765176 | Msa0494550:CDS |
| GGCCTTGAGCAATGGTCACA+AGG | 0.570523 | 3_4:+22765420 | None:intergenic |
| CGGTAGCAACATCCCAAACA+AGG | 0.582449 | 3_4:+22766603 | None:intergenic |
| CCAATGAAGGCCTTGAGCAA+TGG | 0.589997 | 3_4:+22765412 | None:intergenic |
| GAAAGGAATACGCAGATGCA+AGG | 0.594821 | 3_4:-22766682 | Msa0494550:CDS |
| TTCAACAATGTCCATTCCCG+AGG | 0.600141 | 3_4:-22765477 | Msa0494550:CDS |
| ATCCCAAACAAGGTTGTGAG+AGG | 0.600360 | 3_4:+22766613 | None:intergenic |
| AGTGGAAATGTCTGAATACA+GGG | 0.600580 | 3_4:-22764955 | Msa0494550:CDS |
| CTTATCAGACAGCAAAGGAG+AGG | 0.602805 | 3_4:-22765082 | Msa0494550:CDS |
| TTCAGCGTGTACATTAGTTG+AGG | 0.609679 | 3_4:-22765234 | Msa0494550:CDS |
| GGGAATGGACATTGTTGAAG+GGG | 0.613531 | 3_4:+22765481 | None:intergenic |
| GACCTTGTGACCATTGCTCA+AGG | 0.615868 | 3_4:-22765422 | Msa0494550:CDS |
| TTATCTGAGAATTGGAAGAG+TGG | 0.621175 | 3_4:-22764973 | Msa0494550:CDS |
| ATGAATTGAAAGAGTTGTGG+TGG | 0.623238 | 3_4:+22766650 | None:intergenic |
| GGGTGTGGAGCTTCTTGGAG+AGG | 0.629744 | 3_4:-22765060 | Msa0494550:CDS |
| ACAAGGTCTATGGTTCCTTG+TGG | 0.630664 | 3_4:+22765437 | None:intergenic |
| CTTGTTCATAGAAATTTGGG+AGG | 0.638256 | 3_4:+22765384 | None:intergenic |
| GCTATGAATTGAAAGAGTTG+TGG | 0.650825 | 3_4:+22766647 | None:intergenic |
| TCCCAAACAAGGTTGTGAGA+GGG | 0.654225 | 3_4:+22766614 | None:intergenic |
| TATCAGACAGCAAAGGAGAG+GGG | 0.659617 | 3_4:-22765080 | Msa0494550:CDS |
| GAACAAATTGTAACACCACA+AGG | 0.678263 | 3_4:-22765452 | Msa0494550:CDS |
| GTCAGCTTATCAGACAGCAA+AGG | 0.678464 | 3_4:-22765087 | Msa0494550:CDS |
| CAAGCAGCAATGACTCCATG+AGG | 0.711431 | 3_4:+22765341 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTCAAGTTATATTTTATA+CGG | - | chr3_4:22765453-22765472 | Msa0494550:CDS | 15.0% |
| !!! | TTATTGATTCAAAAACTTAT+TGG | - | chr3_4:22766409-22766428 | Msa0494550:intron | 15.0% |
| !!! | TATTGATTCAAAAACTTATT+GGG | - | chr3_4:22766410-22766429 | Msa0494550:intron | 15.0% |
| !! | TGTTAACTTTAATAAAATCA+TGG | - | chr3_4:22766559-22766578 | Msa0494550:intron | 15.0% |
| !!! | CATTCAAGTTATATTTTATA+CGG | - | chr3_4:22765453-22765472 | Msa0494550:CDS | 15.0% |
| !!! | TTATTGATTCAAAAACTTAT+TGG | - | chr3_4:22766409-22766428 | Msa0494550:intron | 15.0% |
| !!! | TATTGATTCAAAAACTTATT+GGG | - | chr3_4:22766410-22766429 | Msa0494550:intron | 15.0% |
| !! | TGTTAACTTTAATAAAATCA+TGG | - | chr3_4:22766559-22766578 | Msa0494550:intron | 15.0% |
| !! | AAATCAAATAGAGTTATAGA+TGG | - | chr3_4:22764942-22764961 | Msa0494550:CDS | 20.0% |
| !! | CTATAAGATATTGTAAGATA+AGG | + | chr3_4:22765149-22765168 | None:intergenic | 20.0% |
| !! | CTTATCTTACAATATCTTAT+AGG | - | chr3_4:22765147-22765166 | Msa0494550:CDS | 20.0% |
| !! | TTATTTAGACATACAAAAGT+CGG | + | chr3_4:22765494-22765513 | None:intergenic | 20.0% |
| !! | AATATTCTTACCTTATAAGT+CGG | + | chr3_4:22765761-22765780 | None:intergenic | 20.0% |
| !! | AAATCAAATAGAGTTATAGA+TGG | - | chr3_4:22764942-22764961 | Msa0494550:CDS | 20.0% |
| !! | CTATAAGATATTGTAAGATA+AGG | + | chr3_4:22765149-22765168 | None:intergenic | 20.0% |
| !! | CTTATCTTACAATATCTTAT+AGG | - | chr3_4:22765147-22765166 | Msa0494550:CDS | 20.0% |
| !! | TTATTTAGACATACAAAAGT+CGG | + | chr3_4:22765494-22765513 | None:intergenic | 20.0% |
| !! | AATATTCTTACCTTATAAGT+CGG | + | chr3_4:22765761-22765780 | None:intergenic | 20.0% |
| !! | GATTTTGTCATGTACTATTT+AGG | + | chr3_4:22765253-22765272 | None:intergenic | 25.0% |
| !!! | GAGTCATATTTAATTTGGAT+TGG | + | chr3_4:22765309-22765328 | None:intergenic | 25.0% |
| ! | GAATGTGTGTAATATTAAAC+AGG | + | chr3_4:22765438-22765457 | None:intergenic | 25.0% |
| !! | TCTAAATAACACGTCTTTTA+TGG | - | chr3_4:22765505-22765524 | Msa0494550:CDS | 25.0% |
| !!! | TCTAACATATGTGTTTTAGA+TGG | - | chr3_4:22765571-22765590 | Msa0494550:intron | 25.0% |
| ! | AAAAATTAAGTTCCACGTTA+GGG | + | chr3_4:22765632-22765651 | None:intergenic | 25.0% |
| ! | AAAAAATTAAGTTCCACGTT+AGG | + | chr3_4:22765633-22765652 | None:intergenic | 25.0% |
| !! | TTTCATAAAACCGACTTATA+AGG | - | chr3_4:22765748-22765767 | Msa0494550:intron | 25.0% |
| !! | CTCTTTTATCAGATAAAATG+TGG | - | chr3_4:22765958-22765977 | Msa0494550:intron | 25.0% |
| !!! | TGACTTGTTCATAGAAATTT+GGG | + | chr3_4:22766290-22766309 | None:intergenic | 25.0% |
| !!! | TTGACTTGTTCATAGAAATT+TGG | + | chr3_4:22766291-22766310 | None:intergenic | 25.0% |
| ! | ATTTCTATGAACAAGTCAAA+TGG | - | chr3_4:22766292-22766311 | Msa0494550:intron | 25.0% |
| ! | TTTCTATGAACAAGTCAAAT+GGG | - | chr3_4:22766293-22766312 | Msa0494550:intron | 25.0% |
| !! | TTGAAAAATTTAAGCTTGCT+TGG | - | chr3_4:22766637-22766656 | Msa0494550:CDS | 25.0% |
| !! | TGAAAAATTTAAGCTTGCTT+GGG | - | chr3_4:22766638-22766657 | Msa0494550:CDS | 25.0% |
| !! | GATTTTGTCATGTACTATTT+AGG | + | chr3_4:22765253-22765272 | None:intergenic | 25.0% |
| !!! | GAGTCATATTTAATTTGGAT+TGG | + | chr3_4:22765309-22765328 | None:intergenic | 25.0% |
| ! | GAATGTGTGTAATATTAAAC+AGG | + | chr3_4:22765438-22765457 | None:intergenic | 25.0% |
| !! | TCTAAATAACACGTCTTTTA+TGG | - | chr3_4:22765505-22765524 | Msa0494550:CDS | 25.0% |
| !!! | TCTAACATATGTGTTTTAGA+TGG | - | chr3_4:22765571-22765590 | Msa0494550:intron | 25.0% |
| ! | AAAAATTAAGTTCCACGTTA+GGG | + | chr3_4:22765632-22765651 | None:intergenic | 25.0% |
| ! | AAAAAATTAAGTTCCACGTT+AGG | + | chr3_4:22765633-22765652 | None:intergenic | 25.0% |
| !! | TTTCATAAAACCGACTTATA+AGG | - | chr3_4:22765748-22765767 | Msa0494550:intron | 25.0% |
| !! | CTCTTTTATCAGATAAAATG+TGG | - | chr3_4:22765958-22765977 | Msa0494550:intron | 25.0% |
| !!! | TGACTTGTTCATAGAAATTT+GGG | + | chr3_4:22766290-22766309 | None:intergenic | 25.0% |
| !!! | TTGACTTGTTCATAGAAATT+TGG | + | chr3_4:22766291-22766310 | None:intergenic | 25.0% |
| ! | ATTTCTATGAACAAGTCAAA+TGG | - | chr3_4:22766292-22766311 | Msa0494550:intron | 25.0% |
| ! | TTTCTATGAACAAGTCAAAT+GGG | - | chr3_4:22766293-22766312 | Msa0494550:intron | 25.0% |
| !! | TTGAAAAATTTAAGCTTGCT+TGG | - | chr3_4:22766637-22766656 | Msa0494550:CDS | 25.0% |
| !! | TGAAAAATTTAAGCTTGCTT+GGG | - | chr3_4:22766638-22766657 | Msa0494550:CDS | 25.0% |
| TGGAGGAGTCATATTTAATT+TGG | + | chr3_4:22765314-22765333 | None:intergenic | 30.0% | |
| CATCCTTGTAACTCTAATAA+TGG | + | chr3_4:22765334-22765353 | None:intergenic | 30.0% | |
| CTAAAACACATATGTTAGAG+AGG | + | chr3_4:22765570-22765589 | None:intergenic | 30.0% | |
| !! | CATATGTGTTTTAGATGGTT+AGG | - | chr3_4:22765576-22765595 | Msa0494550:intron | 30.0% |
| ! | AAGTAAGCCTTGAATTTTGT+TGG | - | chr3_4:22765813-22765832 | Msa0494550:intron | 30.0% |
| CCTATATCCAACAAAATTCA+AGG | + | chr3_4:22765823-22765842 | None:intergenic | 30.0% | |
| ! | CCTTGAATTTTGTTGGATAT+AGG | - | chr3_4:22765820-22765839 | Msa0494550:intron | 30.0% |
| !! | GGACTGATTTTCAAAATTGT+AGG | + | chr3_4:22765985-22766004 | None:intergenic | 30.0% |
| TGTGTTTGTATTGCACATTA+GGG | + | chr3_4:22766167-22766186 | None:intergenic | 30.0% | |
| ! | TGTTACAATTTGTTCAACCT+CGG | + | chr3_4:22766211-22766230 | None:intergenic | 30.0% |
| TCTACTTCATCACTAATTCT+TGG | + | chr3_4:22766366-22766385 | None:intergenic | 30.0% | |
| ! | GAAAAATTTAAGCTTGCTTG+GGG | - | chr3_4:22766639-22766658 | Msa0494550:CDS | 30.0% |
| TTTCCAGTTTATCTGAGAAT+TGG | - | chr3_4:22766687-22766706 | Msa0494550:CDS | 30.0% | |
| TGGAGGAGTCATATTTAATT+TGG | + | chr3_4:22765314-22765333 | None:intergenic | 30.0% | |
| CATCCTTGTAACTCTAATAA+TGG | + | chr3_4:22765334-22765353 | None:intergenic | 30.0% | |
| CTAAAACACATATGTTAGAG+AGG | + | chr3_4:22765570-22765589 | None:intergenic | 30.0% | |
| !! | CATATGTGTTTTAGATGGTT+AGG | - | chr3_4:22765576-22765595 | Msa0494550:intron | 30.0% |
| ! | AAGTAAGCCTTGAATTTTGT+TGG | - | chr3_4:22765813-22765832 | Msa0494550:intron | 30.0% |
| CCTATATCCAACAAAATTCA+AGG | + | chr3_4:22765823-22765842 | None:intergenic | 30.0% | |
| ! | CCTTGAATTTTGTTGGATAT+AGG | - | chr3_4:22765820-22765839 | Msa0494550:intron | 30.0% |
| !! | GGACTGATTTTCAAAATTGT+AGG | + | chr3_4:22765985-22766004 | None:intergenic | 30.0% |
| TGTGTTTGTATTGCACATTA+GGG | + | chr3_4:22766167-22766186 | None:intergenic | 30.0% | |
| ! | TGTTACAATTTGTTCAACCT+CGG | + | chr3_4:22766211-22766230 | None:intergenic | 30.0% |
| TCTACTTCATCACTAATTCT+TGG | + | chr3_4:22766366-22766385 | None:intergenic | 30.0% | |
| ! | GAAAAATTTAAGCTTGCTTG+GGG | - | chr3_4:22766639-22766658 | Msa0494550:CDS | 30.0% |
| TTTCCAGTTTATCTGAGAAT+TGG | - | chr3_4:22766687-22766706 | Msa0494550:CDS | 30.0% | |
| ! | GCAGAACTTTTTGTGAATCA+GGG | - | chr3_4:22764964-22764983 | Msa0494550:CDS | 35.0% |
| ! | ACTTTTTGTGAATCAGGGAA+AGG | - | chr3_4:22764969-22764988 | Msa0494550:CDS | 35.0% |
| ATGAATTGAAAGAGTTGTGG+TGG | + | chr3_4:22765021-22765040 | None:intergenic | 35.0% | |
| GCTATGAATTGAAAGAGTTG+TGG | + | chr3_4:22765024-22765043 | None:intergenic | 35.0% | |
| GTTCAGTACTTACTTTACGA+GGG | + | chr3_4:22765208-22765227 | None:intergenic | 35.0% | |
| TGTTCAGTACTTACTTTACG+AGG | + | chr3_4:22765209-22765228 | None:intergenic | 35.0% | |
| CCTTGTAACTCTAATAATGG+AGG | + | chr3_4:22765331-22765350 | None:intergenic | 35.0% | |
| CCTCCATTATTAGAGTTACA+AGG | - | chr3_4:22765328-22765347 | Msa0494550:CDS | 35.0% | |
| ! | CATATGTTGTTGGTTGATGT+TGG | + | chr3_4:22765375-22765394 | None:intergenic | 35.0% |
| ACAGTGTACACATATGTTGT+TGG | + | chr3_4:22765385-22765404 | None:intergenic | 35.0% | |
| CTTGGTACGCTAATATAAAC+TGG | - | chr3_4:22765687-22765706 | Msa0494550:intron | 35.0% | |
| TTCAAGGCTTACTTAGTTCA+GGG | + | chr3_4:22765807-22765826 | None:intergenic | 35.0% | |
| ATTCAAGGCTTACTTAGTTC+AGG | + | chr3_4:22765808-22765827 | None:intergenic | 35.0% | |
| CTAGCATGCAAATGCAAATT+CGG | + | chr3_4:22765861-22765880 | None:intergenic | 35.0% | |
| GCTTCTTCTTAGTTAGTGTA+AGG | - | chr3_4:22765884-22765903 | Msa0494550:intron | 35.0% | |
| AAAATCAGTCCCACATAAAG+TGG | - | chr3_4:22765994-22766013 | Msa0494550:intron | 35.0% | |
| ATTCATCGGTGAAATCATAC+GGG | + | chr3_4:22766025-22766044 | None:intergenic | 35.0% | |
| CATTCATCGGTGAAATCATA+CGG | + | chr3_4:22766026-22766045 | None:intergenic | 35.0% | |
| GTGTGTTTGTATTGCACATT+AGG | + | chr3_4:22766168-22766187 | None:intergenic | 35.0% | |
| ! | GTTACAATTTGTTCAACCTC+GGG | + | chr3_4:22766210-22766229 | None:intergenic | 35.0% |
| GAACAAATTGTAACACCACA+AGG | - | chr3_4:22766216-22766235 | Msa0494550:intron | 35.0% | |
| CTTGTTCATAGAAATTTGGG+AGG | + | chr3_4:22766287-22766306 | None:intergenic | 35.0% | |
| !!! | AAGCGTTGATTTTCCTTTTG+AGG | - | chr3_4:22766467-22766486 | Msa0494550:intron | 35.0% |
| TCTCAGATAAACTGGAAACT+TGG | + | chr3_4:22766685-22766704 | None:intergenic | 35.0% | |
| CTTCCAATTCTCAGATAAAC+TGG | + | chr3_4:22766693-22766712 | None:intergenic | 35.0% | |
| TTATCTGAGAATTGGAAGAG+TGG | - | chr3_4:22766695-22766714 | Msa0494550:CDS | 35.0% | |
| AGTGGAAATGTCTGAATACA+GGG | - | chr3_4:22766713-22766732 | Msa0494550:exon | 35.0% | |
| AATGTCTGAATACAGGGAAA+TGG | - | chr3_4:22766719-22766738 | Msa0494550:exon | 35.0% | |
| ! | AGGGAAATGGTTACTTTCTA+GGG | - | chr3_4:22766732-22766751 | Msa0494550:five_prime_UTR | 35.0% |
| ! | GCAGAACTTTTTGTGAATCA+GGG | - | chr3_4:22764964-22764983 | Msa0494550:CDS | 35.0% |
| ! | ACTTTTTGTGAATCAGGGAA+AGG | - | chr3_4:22764969-22764988 | Msa0494550:CDS | 35.0% |
| ATGAATTGAAAGAGTTGTGG+TGG | + | chr3_4:22765021-22765040 | None:intergenic | 35.0% | |
| GCTATGAATTGAAAGAGTTG+TGG | + | chr3_4:22765024-22765043 | None:intergenic | 35.0% | |
| GTTCAGTACTTACTTTACGA+GGG | + | chr3_4:22765208-22765227 | None:intergenic | 35.0% | |
| TGTTCAGTACTTACTTTACG+AGG | + | chr3_4:22765209-22765228 | None:intergenic | 35.0% | |
| CCTTGTAACTCTAATAATGG+AGG | + | chr3_4:22765331-22765350 | None:intergenic | 35.0% | |
| CCTCCATTATTAGAGTTACA+AGG | - | chr3_4:22765328-22765347 | Msa0494550:CDS | 35.0% | |
| ! | CATATGTTGTTGGTTGATGT+TGG | + | chr3_4:22765375-22765394 | None:intergenic | 35.0% |
| ACAGTGTACACATATGTTGT+TGG | + | chr3_4:22765385-22765404 | None:intergenic | 35.0% | |
| CTTGGTACGCTAATATAAAC+TGG | - | chr3_4:22765687-22765706 | Msa0494550:intron | 35.0% | |
| TTCAAGGCTTACTTAGTTCA+GGG | + | chr3_4:22765807-22765826 | None:intergenic | 35.0% | |
| ATTCAAGGCTTACTTAGTTC+AGG | + | chr3_4:22765808-22765827 | None:intergenic | 35.0% | |
| CTAGCATGCAAATGCAAATT+CGG | + | chr3_4:22765861-22765880 | None:intergenic | 35.0% | |
| GCTTCTTCTTAGTTAGTGTA+AGG | - | chr3_4:22765884-22765903 | Msa0494550:intron | 35.0% | |
| AAAATCAGTCCCACATAAAG+TGG | - | chr3_4:22765994-22766013 | Msa0494550:intron | 35.0% | |
| ATTCATCGGTGAAATCATAC+GGG | + | chr3_4:22766025-22766044 | None:intergenic | 35.0% | |
| CATTCATCGGTGAAATCATA+CGG | + | chr3_4:22766026-22766045 | None:intergenic | 35.0% | |
| GTGTGTTTGTATTGCACATT+AGG | + | chr3_4:22766168-22766187 | None:intergenic | 35.0% | |
| ! | GTTACAATTTGTTCAACCTC+GGG | + | chr3_4:22766210-22766229 | None:intergenic | 35.0% |
| GAACAAATTGTAACACCACA+AGG | - | chr3_4:22766216-22766235 | Msa0494550:intron | 35.0% | |
| CTTGTTCATAGAAATTTGGG+AGG | + | chr3_4:22766287-22766306 | None:intergenic | 35.0% | |
| !!! | AAGCGTTGATTTTCCTTTTG+AGG | - | chr3_4:22766467-22766486 | Msa0494550:intron | 35.0% |
| TCTCAGATAAACTGGAAACT+TGG | + | chr3_4:22766685-22766704 | None:intergenic | 35.0% | |
| CTTCCAATTCTCAGATAAAC+TGG | + | chr3_4:22766693-22766712 | None:intergenic | 35.0% | |
| TTATCTGAGAATTGGAAGAG+TGG | - | chr3_4:22766695-22766714 | Msa0494550:CDS | 35.0% | |
| AGTGGAAATGTCTGAATACA+GGG | - | chr3_4:22766713-22766732 | Msa0494550:exon | 35.0% | |
| AATGTCTGAATACAGGGAAA+TGG | - | chr3_4:22766719-22766738 | Msa0494550:exon | 35.0% | |
| ! | GGCAGAACTTTTTGTGAATC+AGG | - | chr3_4:22764963-22764982 | Msa0494550:CDS | 40.0% |
| !! | AAGAGTTGTGGTGGATAACT+TGG | + | chr3_4:22765012-22765031 | None:intergenic | 40.0% |
| AAGGAAGAGATAAAGTGCGA+GGG | + | chr3_4:22765130-22765149 | None:intergenic | 40.0% | |
| TAAGGAAGAGATAAAGTGCG+AGG | + | chr3_4:22765131-22765150 | None:intergenic | 40.0% | |
| !! | GCAACGCTTTGAAACATAGA+TGG | - | chr3_4:22765273-22765292 | Msa0494550:CDS | 40.0% |
| GGAGAATTGAGCTAGTTGTT+TGG | - | chr3_4:22765597-22765616 | Msa0494550:intron | 40.0% | |
| !!! | TGGTTTTATAAGCCCTAACG+TGG | - | chr3_4:22765617-22765636 | Msa0494550:intron | 40.0% |
| TAATAGTACGAGACGTAAGG+GGG | + | chr3_4:22765665-22765684 | None:intergenic | 40.0% | |
| GTAATAGTACGAGACGTAAG+GGG | + | chr3_4:22765666-22765685 | None:intergenic | 40.0% | |
| CGTAATAGTACGAGACGTAA+GGG | + | chr3_4:22765667-22765686 | None:intergenic | 40.0% | |
| !! | TGCAAATGCAAATTCGGTGT+CGG | + | chr3_4:22765855-22765874 | None:intergenic | 40.0% |
| ATGATTTCACCGATGAATGC+AGG | - | chr3_4:22766027-22766046 | Msa0494550:intron | 40.0% | |
| ACTCTTTCTCCTGCATTCAT+CGG | + | chr3_4:22766039-22766058 | None:intergenic | 40.0% | |
| ! | TTGTTGTTCACTCACATCTG+TGG | + | chr3_4:22766124-22766143 | None:intergenic | 40.0% |
| ! | AATTTGTTCAACCTCGGGAA+TGG | + | chr3_4:22766205-22766224 | None:intergenic | 40.0% |
| TTCAGCGTGTACATTAGTTG+AGG | - | chr3_4:22766434-22766453 | Msa0494550:intron | 40.0% | |
| !!! | TGATTTTCCTTTTGAGGCAG+TGG | - | chr3_4:22766473-22766492 | Msa0494550:intron | 40.0% |
| CTCTCTGTCACAAACTGAAA+TGG | + | chr3_4:22766519-22766538 | None:intergenic | 40.0% | |
| GACAGAGAGATTGATGAGTT+TGG | - | chr3_4:22766530-22766549 | Msa0494550:intron | 40.0% | |
| GAGAGATTGATGAGTTTGGA+TGG | - | chr3_4:22766534-22766553 | Msa0494550:intron | 40.0% | |
| TTATCAGACAGCAAAGGAGA+GGG | - | chr3_4:22766587-22766606 | Msa0494550:CDS | 40.0% | |
| GAGTGGAAATGTCTGAATAC+AGG | - | chr3_4:22766712-22766731 | Msa0494550:exon | 40.0% | |
| ! | CAGGGAAATGGTTACTTTCT+AGG | - | chr3_4:22766731-22766750 | Msa0494550:five_prime_UTR | 40.0% |
| ! | GGCAGAACTTTTTGTGAATC+AGG | - | chr3_4:22764963-22764982 | Msa0494550:CDS | 40.0% |
| !! | AAGAGTTGTGGTGGATAACT+TGG | + | chr3_4:22765012-22765031 | None:intergenic | 40.0% |
| AAGGAAGAGATAAAGTGCGA+GGG | + | chr3_4:22765130-22765149 | None:intergenic | 40.0% | |
| TAAGGAAGAGATAAAGTGCG+AGG | + | chr3_4:22765131-22765150 | None:intergenic | 40.0% | |
| !! | GCAACGCTTTGAAACATAGA+TGG | - | chr3_4:22765273-22765292 | Msa0494550:CDS | 40.0% |
| GGAGAATTGAGCTAGTTGTT+TGG | - | chr3_4:22765597-22765616 | Msa0494550:intron | 40.0% | |
| !!! | TGGTTTTATAAGCCCTAACG+TGG | - | chr3_4:22765617-22765636 | Msa0494550:intron | 40.0% |
| TAATAGTACGAGACGTAAGG+GGG | + | chr3_4:22765665-22765684 | None:intergenic | 40.0% | |
| GTAATAGTACGAGACGTAAG+GGG | + | chr3_4:22765666-22765685 | None:intergenic | 40.0% | |
| CGTAATAGTACGAGACGTAA+GGG | + | chr3_4:22765667-22765686 | None:intergenic | 40.0% | |
| !! | TGCAAATGCAAATTCGGTGT+CGG | + | chr3_4:22765855-22765874 | None:intergenic | 40.0% |
| ATGATTTCACCGATGAATGC+AGG | - | chr3_4:22766027-22766046 | Msa0494550:intron | 40.0% | |
| ACTCTTTCTCCTGCATTCAT+CGG | + | chr3_4:22766039-22766058 | None:intergenic | 40.0% | |
| ! | TTGTTGTTCACTCACATCTG+TGG | + | chr3_4:22766124-22766143 | None:intergenic | 40.0% |
| ! | AATTTGTTCAACCTCGGGAA+TGG | + | chr3_4:22766205-22766224 | None:intergenic | 40.0% |
| TTCAGCGTGTACATTAGTTG+AGG | - | chr3_4:22766434-22766453 | Msa0494550:intron | 40.0% | |
| !!! | TGATTTTCCTTTTGAGGCAG+TGG | - | chr3_4:22766473-22766492 | Msa0494550:intron | 40.0% |
| CTCTCTGTCACAAACTGAAA+TGG | + | chr3_4:22766519-22766538 | None:intergenic | 40.0% | |
| GACAGAGAGATTGATGAGTT+TGG | - | chr3_4:22766530-22766549 | Msa0494550:intron | 40.0% | |
| GAGAGATTGATGAGTTTGGA+TGG | - | chr3_4:22766534-22766553 | Msa0494550:intron | 40.0% | |
| TTATCAGACAGCAAAGGAGA+GGG | - | chr3_4:22766587-22766606 | Msa0494550:CDS | 40.0% | |
| GAGTGGAAATGTCTGAATAC+AGG | - | chr3_4:22766712-22766731 | Msa0494550:exon | 40.0% | |
| GAAAGGAATACGCAGATGCA+AGG | - | chr3_4:22764986-22765005 | Msa0494550:CDS | 45.0% | |
| ! | TCCCTCTCACAACCTTGTTT+GGG | - | chr3_4:22765053-22765072 | Msa0494550:CDS | 45.0% |
| TCCCAAACAAGGTTGTGAGA+GGG | + | chr3_4:22765057-22765076 | None:intergenic | 45.0% | |
| ATCCCAAACAAGGTTGTGAG+AGG | + | chr3_4:22765058-22765077 | None:intergenic | 45.0% | |
| ! | CTTGTTTGGGATGTTGCTAC+CGG | - | chr3_4:22765066-22765085 | Msa0494550:CDS | 45.0% |
| AACTTACAGATTTGGCGGCT+TGG | + | chr3_4:22765098-22765117 | None:intergenic | 45.0% | |
| GAGCGAACTTACAGATTTGG+CGG | + | chr3_4:22765103-22765122 | None:intergenic | 45.0% | |
| AGGGAGCGAACTTACAGATT+TGG | + | chr3_4:22765106-22765125 | None:intergenic | 45.0% | |
| AGAGATAAAGTGCGAGGGAA+GGG | + | chr3_4:22765125-22765144 | None:intergenic | 45.0% | |
| AAGAGATAAAGTGCGAGGGA+AGG | + | chr3_4:22765126-22765145 | None:intergenic | 45.0% | |
| CAGTACTTACTTTACGAGGG+AGG | + | chr3_4:22765205-22765224 | None:intergenic | 45.0% | |
| GCGTAATAGTACGAGACGTA+AGG | + | chr3_4:22765668-22765687 | None:intergenic | 45.0% | |
| ACGTCTCGTACTATTACGCT+TGG | - | chr3_4:22765669-22765688 | Msa0494550:intron | 45.0% | |
| GCTTACTTAGTTCAGGGAGA+AGG | + | chr3_4:22765801-22765820 | None:intergenic | 45.0% | |
| ATCAGTCCCACATAAAGTGG+TGG | - | chr3_4:22765997-22766016 | Msa0494550:intron | 45.0% | |
| GTATTGCACATTAGGGAGCT+TGG | + | chr3_4:22766160-22766179 | None:intergenic | 45.0% | |
| GGGAATGGACATTGTTGAAG+GGG | + | chr3_4:22766190-22766209 | None:intergenic | 45.0% | |
| CGGGAATGGACATTGTTGAA+GGG | + | chr3_4:22766191-22766210 | None:intergenic | 45.0% | |
| TCGGGAATGGACATTGTTGA+AGG | + | chr3_4:22766192-22766211 | None:intergenic | 45.0% | |
| TTCAACAATGTCCATTCCCG+AGG | - | chr3_4:22766191-22766210 | Msa0494550:intron | 45.0% | |
| ACAAGGTCTATGGTTCCTTG+TGG | + | chr3_4:22766234-22766253 | None:intergenic | 45.0% | |
| AGCAATGGTCACAAGGTCTA+TGG | + | chr3_4:22766244-22766263 | None:intergenic | 45.0% | |
| TTGGGAGGTCAAACCAATGA+AGG | + | chr3_4:22766272-22766291 | None:intergenic | 45.0% | |
| TGGGTACTCAAGAAACCTCA+TGG | - | chr3_4:22766312-22766331 | Msa0494550:intron | 45.0% | |
| !!! | TTTCCTTTTGAGGCAGTGGA+TGG | - | chr3_4:22766477-22766496 | Msa0494550:intron | 45.0% |
| ! | GTGGATGGAGTTGATCATAC+AGG | - | chr3_4:22766492-22766511 | Msa0494550:intron | 45.0% |
| GTCAGCTTATCAGACAGCAA+AGG | - | chr3_4:22766581-22766600 | Msa0494550:CDS | 45.0% | |
| CTTATCAGACAGCAAAGGAG+AGG | - | chr3_4:22766586-22766605 | Msa0494550:CDS | 45.0% | |
| TATCAGACAGCAAAGGAGAG+GGG | - | chr3_4:22766588-22766607 | Msa0494550:CDS | 45.0% | |
| GAAAGGAATACGCAGATGCA+AGG | - | chr3_4:22764986-22765005 | Msa0494550:CDS | 45.0% | |
| ! | TCCCTCTCACAACCTTGTTT+GGG | - | chr3_4:22765053-22765072 | Msa0494550:CDS | 45.0% |
| TCCCAAACAAGGTTGTGAGA+GGG | + | chr3_4:22765057-22765076 | None:intergenic | 45.0% | |
| ATCCCAAACAAGGTTGTGAG+AGG | + | chr3_4:22765058-22765077 | None:intergenic | 45.0% | |
| ! | CTTGTTTGGGATGTTGCTAC+CGG | - | chr3_4:22765066-22765085 | Msa0494550:CDS | 45.0% |
| AACTTACAGATTTGGCGGCT+TGG | + | chr3_4:22765098-22765117 | None:intergenic | 45.0% | |
| GAGCGAACTTACAGATTTGG+CGG | + | chr3_4:22765103-22765122 | None:intergenic | 45.0% | |
| AGGGAGCGAACTTACAGATT+TGG | + | chr3_4:22765106-22765125 | None:intergenic | 45.0% | |
| AGAGATAAAGTGCGAGGGAA+GGG | + | chr3_4:22765125-22765144 | None:intergenic | 45.0% | |
| AAGAGATAAAGTGCGAGGGA+AGG | + | chr3_4:22765126-22765145 | None:intergenic | 45.0% | |
| CAGTACTTACTTTACGAGGG+AGG | + | chr3_4:22765205-22765224 | None:intergenic | 45.0% | |
| GCGTAATAGTACGAGACGTA+AGG | + | chr3_4:22765668-22765687 | None:intergenic | 45.0% | |
| ACGTCTCGTACTATTACGCT+TGG | - | chr3_4:22765669-22765688 | Msa0494550:intron | 45.0% | |
| GCTTACTTAGTTCAGGGAGA+AGG | + | chr3_4:22765801-22765820 | None:intergenic | 45.0% | |
| ATCAGTCCCACATAAAGTGG+TGG | - | chr3_4:22765997-22766016 | Msa0494550:intron | 45.0% | |
| GTATTGCACATTAGGGAGCT+TGG | + | chr3_4:22766160-22766179 | None:intergenic | 45.0% | |
| GGGAATGGACATTGTTGAAG+GGG | + | chr3_4:22766190-22766209 | None:intergenic | 45.0% | |
| CGGGAATGGACATTGTTGAA+GGG | + | chr3_4:22766191-22766210 | None:intergenic | 45.0% | |
| TCGGGAATGGACATTGTTGA+AGG | + | chr3_4:22766192-22766211 | None:intergenic | 45.0% | |
| TTCAACAATGTCCATTCCCG+AGG | - | chr3_4:22766191-22766210 | Msa0494550:intron | 45.0% | |
| ACAAGGTCTATGGTTCCTTG+TGG | + | chr3_4:22766234-22766253 | None:intergenic | 45.0% | |
| AGCAATGGTCACAAGGTCTA+TGG | + | chr3_4:22766244-22766263 | None:intergenic | 45.0% | |
| TTGGGAGGTCAAACCAATGA+AGG | + | chr3_4:22766272-22766291 | None:intergenic | 45.0% | |
| TGGGTACTCAAGAAACCTCA+TGG | - | chr3_4:22766312-22766331 | Msa0494550:intron | 45.0% | |
| !!! | TTTCCTTTTGAGGCAGTGGA+TGG | - | chr3_4:22766477-22766496 | Msa0494550:intron | 45.0% |
| ! | GTGGATGGAGTTGATCATAC+AGG | - | chr3_4:22766492-22766511 | Msa0494550:intron | 45.0% |
| GTCAGCTTATCAGACAGCAA+AGG | - | chr3_4:22766581-22766600 | Msa0494550:CDS | 45.0% | |
| CTTATCAGACAGCAAAGGAG+AGG | - | chr3_4:22766586-22766605 | Msa0494550:CDS | 45.0% | |
| TATCAGACAGCAAAGGAGAG+GGG | - | chr3_4:22766588-22766607 | Msa0494550:CDS | 45.0% | |
| CTCCCTCTCACAACCTTGTT+TGG | - | chr3_4:22765052-22765071 | Msa0494550:CDS | 50.0% | |
| CGGTAGCAACATCCCAAACA+AGG | + | chr3_4:22765068-22765087 | None:intergenic | 50.0% | |
| CGGGTTCCACCACTTTATGT+GGG | + | chr3_4:22766006-22766025 | None:intergenic | 50.0% | |
| ACGGGTTCCACCACTTTATG+TGG | + | chr3_4:22766007-22766026 | None:intergenic | 50.0% | |
| GACCTTGTGACCATTGCTCA+AGG | - | chr3_4:22766246-22766265 | Msa0494550:intron | 50.0% | |
| CCAATGAAGGCCTTGAGCAA+TGG | + | chr3_4:22766259-22766278 | None:intergenic | 50.0% | |
| CCATTGCTCAAGGCCTTCAT+TGG | - | chr3_4:22766256-22766275 | Msa0494550:intron | 50.0% | |
| CAAGCAGCAATGACTCCATG+AGG | + | chr3_4:22766330-22766349 | None:intergenic | 50.0% | |
| CTCATGGAGTCATTGCTGCT+TGG | - | chr3_4:22766328-22766347 | Msa0494550:intron | 50.0% | |
| ACTCCATCCACTGCCTCAAA+AGG | + | chr3_4:22766483-22766502 | None:intergenic | 50.0% | |
| ! | AAGCTTGCTTGGGGTGAAGA+TGG | - | chr3_4:22766648-22766667 | Msa0494550:CDS | 50.0% |
| CTCCCTCTCACAACCTTGTT+TGG | - | chr3_4:22765052-22765071 | Msa0494550:CDS | 50.0% | |
| CGGTAGCAACATCCCAAACA+AGG | + | chr3_4:22765068-22765087 | None:intergenic | 50.0% | |
| CGGGTTCCACCACTTTATGT+GGG | + | chr3_4:22766006-22766025 | None:intergenic | 50.0% | |
| ACGGGTTCCACCACTTTATG+TGG | + | chr3_4:22766007-22766026 | None:intergenic | 50.0% | |
| GACCTTGTGACCATTGCTCA+AGG | - | chr3_4:22766246-22766265 | Msa0494550:intron | 50.0% | |
| CCAATGAAGGCCTTGAGCAA+TGG | + | chr3_4:22766259-22766278 | None:intergenic | 50.0% | |
| CCATTGCTCAAGGCCTTCAT+TGG | - | chr3_4:22766256-22766275 | Msa0494550:intron | 50.0% | |
| CAAGCAGCAATGACTCCATG+AGG | + | chr3_4:22766330-22766349 | None:intergenic | 50.0% | |
| CTCATGGAGTCATTGCTGCT+TGG | - | chr3_4:22766328-22766347 | Msa0494550:intron | 50.0% | |
| ACTCCATCCACTGCCTCAAA+AGG | + | chr3_4:22766483-22766502 | None:intergenic | 50.0% | |
| ! | AAGCTTGCTTGGGGTGAAGA+TGG | - | chr3_4:22766648-22766667 | Msa0494550:CDS | 50.0% |
| TGGGATGTTGCTACCGGAAG+TGG | - | chr3_4:22765072-22765091 | Msa0494550:CDS | 55.0% | |
| GGCCTTGAGCAATGGTCACA+AGG | + | chr3_4:22766251-22766270 | None:intergenic | 55.0% | |
| TGGGATGTTGCTACCGGAAG+TGG | - | chr3_4:22765072-22765091 | Msa0494550:CDS | 55.0% | |
| GGCCTTGAGCAATGGTCACA+AGG | + | chr3_4:22766251-22766270 | None:intergenic | 55.0% | |
| ! | TTTGGCGGCTTGGCCACTTC+CGG | + | chr3_4:22765088-22765107 | None:intergenic | 60.0% |
| GACAGCAAAGGAGAGGGGTG+TGG | - | chr3_4:22766593-22766612 | Msa0494550:CDS | 60.0% | |
| ! | GAGAGGGGTGTGGAGCTTCT+TGG | - | chr3_4:22766603-22766622 | Msa0494550:CDS | 60.0% |
| GGGTGTGGAGCTTCTTGGAG+AGG | - | chr3_4:22766608-22766627 | Msa0494550:CDS | 60.0% | |
| ! | TTTGGCGGCTTGGCCACTTC+CGG | + | chr3_4:22765088-22765107 | None:intergenic | 60.0% |
| GACAGCAAAGGAGAGGGGTG+TGG | - | chr3_4:22766593-22766612 | Msa0494550:CDS | 60.0% | |
| ! | GAGAGGGGTGTGGAGCTTCT+TGG | - | chr3_4:22766603-22766622 | Msa0494550:CDS | 60.0% |
| GGGTGTGGAGCTTCTTGGAG+AGG | - | chr3_4:22766608-22766627 | Msa0494550:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 22764938 | 22766752 | 22764938 | ID=Msa0494550;Name=Msa0494550 |
| chr3_4 | mRNA | 22764938 | 22766752 | 22764938 | ID=Msa0494550-mRNA-1;Parent=Msa0494550;Name=Msa0494550-mRNA-1;_AED=0.11;_eAED=0.11;_QI=23|0|0.5|1|0|0.5|2|0|246 |
| chr3_4 | exon | 22764938 | 22765528 | 22764938 | ID=Msa0494550-mRNA-1:exon:5656;Parent=Msa0494550-mRNA-1 |
| chr3_4 | exon | 22766580 | 22766752 | 22766580 | ID=Msa0494550-mRNA-1:exon:5655;Parent=Msa0494550-mRNA-1 |
| chr3_4 | five_prime_UTR | 22766730 | 22766752 | 22766730 | ID=Msa0494550-mRNA-1:five_prime_utr;Parent=Msa0494550-mRNA-1 |
| chr3_4 | CDS | 22766580 | 22766729 | 22766580 | ID=Msa0494550-mRNA-1:cds;Parent=Msa0494550-mRNA-1 |
| chr3_4 | CDS | 22764938 | 22765528 | 22764938 | ID=Msa0494550-mRNA-1:cds;Parent=Msa0494550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
