AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0494660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0494660 MtrunA17_Chr3g0101721 91.284 436 35 1 1 433 73 508 0.0 833
Msa0494660 MtrunA17_Chr3g0101741 83.871 434 65 1 1 434 1 429 0.0 779
Msa0494660 MtrunA17_Chr3g0101761 83.410 434 69 1 1 431 71 504 0.0 742
Msa0494660 MtrunA17_Chr3g0101821 81.609 435 77 1 1 432 71 505 0.0 726
Msa0494660 MtrunA17_Chr8g0357421 81.293 433 80 1 1 432 73 505 0.0 719
Msa0494660 MtrunA17_Chr3g0101751 79.587 436 86 1 1 433 78 513 0.0 717
Msa0494660 MtrunA17_Chr3g0101801 79.358 436 87 1 1 433 78 513 0.0 717
Msa0494660 MtrunA17_Chr8g0357431 79.954 434 85 1 1 432 73 506 0.0 708
Msa0494660 MtrunA17_Chr3g0101811 76.169 449 91 2 1 433 73 521 0.0 707
Msa0494660 MtrunA17_Chr3g0101731 75.571 438 99 2 1 433 72 506 0.0 689
Msa0494660 MtrunA17_Chr3g0101831 76.147 436 102 1 1 434 73 508 0.0 671
Msa0494660 MtrunA17_Chr1g0162811 68.591 433 130 4 1 430 73 502 0.0 626
Msa0494660 MtrunA17_Chr1g0162801 68.433 434 132 3 1 430 73 505 0.0 607
Msa0494660 MtrunA17_Chr1g0167321 67.586 435 136 3 1 431 70 503 0.0 594
Msa0494660 MtrunA17_Chr4g0020041 63.084 428 154 3 1 425 73 499 0.0 592
Msa0494660 MtrunA17_Chr3g0101671 62.100 438 162 2 1 434 74 511 0.0 589
Msa0494660 MtrunA17_Chr3g0101601 64.138 435 144 4 1 430 72 499 0.0 589
Msa0494660 MtrunA17_Chr3g0101631 62.903 434 150 3 1 430 72 498 0.0 587
Msa0494660 MtrunA17_Chr3g0101711 62.243 437 157 3 1 431 73 507 0.0 587
Msa0494660 MtrunA17_Chr3g0101701 63.194 432 155 3 1 428 74 505 0.0 585
Msa0494660 MtrunA17_Chr3g0101691 61.111 432 164 2 1 428 74 505 0.0 583
Msa0494660 MtrunA17_Chr3g0101651 61.098 437 162 3 1 431 74 508 0.0 582
Msa0494660 MtrunA17_Chr3g0101621 64.120 432 146 4 1 430 69 493 0.0 580
Msa0494660 MtrunA17_Chr3g0101661 61.949 431 161 2 1 428 74 504 0.0 578
Msa0494660 MtrunA17_Chr6g0466331 61.521 434 161 3 1 429 70 502 0.0 554
Msa0494660 MtrunA17_Chr6g0465511 61.521 434 161 3 1 429 70 502 0.0 552
Msa0494660 MtrunA17_Chr8g0361471 61.187 438 164 3 1 433 70 506 0.0 551
Msa0494660 MtrunA17_Chr3g0101581 54.965 433 190 3 1 429 72 503 1.89e-180 513
Msa0494660 MtrunA17_Chr3g0101571 55.324 432 190 2 1 430 71 501 1.37e-179 510
Msa0494660 MtrunA17_Chr3g0101611 55.093 432 191 1 1 429 73 504 3.17e-179 510
Msa0494660 MtrunA17_Chr5g0445531 55.116 430 190 1 1 430 75 501 4.53e-175 499
Msa0494660 MtrunA17_Chr5g0431641 54.524 431 192 2 1 430 75 502 1.22e-174 498
Msa0494660 MtrunA17_Chr5g0403351 52.778 432 200 1 1 428 72 503 1.56e-173 495
Msa0494660 MtrunA17_Chr5g0446161 55.069 434 183 5 1 430 77 502 1.85e-173 495
Msa0494660 MtrunA17_Chr5g0431671 52.900 431 199 2 1 430 76 503 5.79e-171 489
Msa0494660 MtrunA17_Chr5g0446151 53.596 431 195 4 1 430 77 503 1.31e-170 488
Msa0494660 MtrunA17_Chr6g0463801 53.917 434 195 2 1 433 73 502 2.35e-168 482
Msa0494660 MtrunA17_Chr5g0445381 54.225 426 191 2 1 425 106 528 3.33e-167 480
Msa0494660 MtrunA17_Chr5g0445451 53.521 426 194 2 1 425 75 497 6.39e-167 478
Msa0494660 MtrunA17_Chr5g0445461 53.009 432 197 3 1 430 75 502 1.02e-166 478
Msa0494660 MtrunA17_Chr5g0445441 53.521 426 194 2 1 425 116 538 1.62e-166 479
Msa0494660 MtrunA17_Chr5g0403331 51.852 432 204 3 1 428 73 504 2.89e-166 477
Msa0494660 MtrunA17_Chr4g0024771 52.900 431 199 2 1 430 75 502 5.66e-166 476
Msa0494660 MtrunA17_Chr5g0403321 51.724 435 203 3 1 428 72 506 2.37e-165 474
Msa0494660 MtrunA17_Chr4g0076161 51.163 430 201 4 1 425 75 500 5.67e-163 468
Msa0494660 MtrunA17_Chr2g0280261 55.116 430 188 2 1 429 70 495 6.05e-161 463
Msa0494660 MtrunA17_Chr6g0463791 51.963 433 197 6 1 428 73 499 3.04e-160 461
Msa0494660 MtrunA17_Chr5g0445421 52.817 426 176 3 1 425 149 550 2.66e-159 461
Msa0494660 MtrunA17_Chr3g0116681 44.495 436 231 3 1 429 75 506 3.07e-141 413
Msa0494660 MtrunA17_Chr5g0431591 56.151 317 134 2 113 427 4 317 3.29e-131 380
Msa0494660 MtrunA17_Chr1g0156101 42.081 442 239 5 1 425 68 509 1.06e-126 376
Msa0494660 MtrunA17_Chr4g0047661 44.598 435 234 3 1 428 83 517 1.50e-124 371
Msa0494660 MtrunA17_Chr3g0116741 41.244 434 244 5 3 429 88 517 6.89e-124 369
Msa0494660 MtrunA17_Chr4g0035921 41.986 443 233 9 2 425 73 510 1.23e-120 361
Msa0494660 MtrunA17_Chr4g0047631 42.326 430 245 3 1 428 84 512 5.56e-120 359
Msa0494660 MtrunA17_Chr2g0310391 41.299 431 244 4 1 425 63 490 8.74e-120 358
Msa0494660 MtrunA17_Chr4g0047641 43.981 432 238 3 1 428 85 516 1.18e-119 358
Msa0494660 MtrunA17_Chr2g0310381 41.995 431 241 4 1 425 63 490 3.42e-119 356
Msa0494660 MtrunA17_Chr5g0405001 40.826 436 241 7 2 425 80 510 1.88e-118 355
Msa0494660 MtrunA17_Chr4g0058281 41.475 434 248 4 1 428 81 514 3.14e-118 355
Msa0494660 MtrunA17_Chr4g0058231 41.339 433 240 5 1 422 63 492 3.15e-118 354
Msa0494660 MtrunA17_Chr5g0430031 42.989 435 233 6 1 425 72 501 5.39e-118 354
Msa0494660 MtrunA17_Chr4g0047691 43.396 424 237 3 1 422 87 509 2.45e-117 352
Msa0494660 MtrunA17_Chr4g0058191 40.185 433 250 4 1 428 60 488 3.15e-117 351
Msa0494660 MtrunA17_Chr1g0156081 42.534 442 237 5 1 425 92 533 3.85e-116 350
Msa0494660 MtrunA17_Chr4g0058261 40.909 440 245 7 1 428 97 533 8.64e-116 349
Msa0494660 MtrunA17_Chr4g0011921 42.290 428 239 3 3 424 67 492 6.03e-115 345
Msa0494660 MtrunA17_Chr4g0011961 41.355 428 242 3 3 424 67 491 1.76e-114 344
Msa0494660 MtrunA17_Chr5g0430101 41.995 431 241 5 1 425 71 498 5.95e-114 343
Msa0494660 MtrunA17_Chr8g0382901 40.326 429 248 3 1 425 527 951 1.11e-113 355
Msa0494660 MtrunA17_Chr8g0382901 40.515 427 235 4 1 425 63 472 3.44e-110 346
Msa0494660 MtrunA17_Chr5g0430131 43.218 435 231 6 1 425 72 500 4.23e-113 341
Msa0494660 MtrunA17_Chr6g0484841 40.639 438 239 7 1 425 72 501 9.11e-113 340
Msa0494660 MtrunA17_Chr5g0431511 38.515 431 257 4 1 424 69 498 1.86e-111 337
Msa0494660 MtrunA17_Chr5g0430081 43.119 436 231 7 1 425 70 499 2.09e-111 337
Msa0494660 MtrunA17_Chr4g0058201 40.326 429 249 4 1 424 63 489 2.88e-111 336
Msa0494660 MtrunA17_Chr5g0419691 40.515 427 246 3 3 423 67 491 3.16e-111 336
Msa0494660 MtrunA17_Chr5g0430091 43.349 436 230 7 1 425 72 501 8.49e-111 335
Msa0494660 MtrunA17_Chr4g0011901 40.654 428 246 3 3 424 67 492 9.71e-111 335
Msa0494660 MtrunA17_Chr8g0390881 38.568 433 256 5 1 425 71 501 3.35e-110 334
Msa0494660 MtrunA17_Chr8g0372251 40.826 436 242 7 2 425 71 502 4.25e-110 333
Msa0494660 MtrunA17_Chr4g0011871 39.953 428 248 3 3 423 67 492 3.65e-109 331
Msa0494660 MtrunA17_Chr4g0011981 39.720 428 250 3 3 424 67 492 4.08e-109 330
Msa0494660 MtrunA17_Chr6g0472311 39.679 436 249 5 1 422 76 511 5.48e-109 331
Msa0494660 MtrunA17_Chr5g0446101 48.276 319 157 4 112 429 3 314 8.70e-109 323
Msa0494660 MtrunA17_Chr5g0431501 39.302 430 251 5 3 424 71 498 8.35e-108 327
Msa0494660 MtrunA17_Chr5g0431461 39.302 430 251 5 3 424 71 498 8.35e-108 327
Msa0494660 MtrunA17_Chr3g0086691 38.326 454 246 8 1 428 67 512 1.88e-107 327
Msa0494660 MtrunA17_Chr6g0484811 38.018 434 257 5 1 425 72 502 2.63e-107 326
Msa0494660 MtrunA17_Chr4g0061381 37.220 446 253 7 1 430 66 500 4.66e-106 323
Msa0494660 MtrunA17_Chr3g0086661 39.002 441 249 7 1 425 67 503 1.00e-105 322
Msa0494660 MtrunA17_Chr7g0218611 39.019 428 253 5 3 424 71 496 1.35e-105 322
Msa0494660 MtrunA17_Chr7g0218601 38.318 428 254 5 3 424 72 495 2.45e-105 321
Msa0494660 MtrunA17_Chr3g0086651 38.117 446 251 8 1 430 67 503 7.64e-104 318
Msa0494660 MtrunA17_Chr8g0344151 37.995 429 250 5 1 418 71 494 1.85e-103 317
Msa0494660 MtrunA17_Chr5g0406651 40.888 428 245 3 3 424 68 493 4.97e-103 315
Msa0494660 MtrunA17_Chr8g0344181 37.617 428 253 4 1 418 73 496 1.60e-102 314
Msa0494660 MtrunA17_Chr4g0011881 40.559 429 244 5 3 424 68 492 4.16e-102 313
Msa0494660 MtrunA17_Chr1g0156061 40.187 428 202 5 1 426 91 466 1.17e-100 308
Msa0494660 MtrunA17_Chr1g0205361 36.721 433 261 6 1 426 69 495 1.80e-95 295
Msa0494660 MtrunA17_Chr3g0084921 36.961 441 259 7 1 425 70 507 3.93e-95 295
Msa0494660 MtrunA17_Chr4g0057001 36.364 429 262 4 3 425 87 510 3.94e-95 295
Msa0494660 MtrunA17_Chr3g0094231 36.534 427 252 9 1 417 71 488 5.00e-95 295
Msa0494660 MtrunA17_Chr7g0246221 36.150 426 261 4 1 417 69 492 5.38e-95 295
Msa0494660 MtrunA17_Chr8g0362481 35.520 442 258 9 1 425 1 432 1.58e-94 291
Msa0494660 MtrunA17_Chr1g0174471 35.253 434 263 8 5 425 89 517 2.60e-94 293
Msa0494660 MtrunA17_Chr3g0094171 36.279 430 255 8 1 418 75 497 4.58e-94 292
Msa0494660 MtrunA17_Chr1g0160851 34.722 432 271 5 1 426 69 495 7.13e-93 289
Msa0494660 MtrunA17_Chr1g0174451 34.554 437 268 8 1 425 72 502 7.94e-93 289
Msa0494660 MtrunA17_Chr7g0235551 36.706 425 248 9 1 409 69 488 2.71e-92 288
Msa0494660 MtrunA17_Chr7g0265611 36.758 438 260 7 1 425 81 514 5.32e-92 287
Msa0494660 MtrunA17_Chr8g0344191 35.814 430 259 6 1 418 104 528 1.43e-91 287
Msa0494660 MtrunA17_Chr3g0101591 58.416 202 84 0 228 429 38 239 3.04e-90 273
Msa0494660 MtrunA17_Chr4g0056951 34.965 429 269 3 3 425 81 505 3.17e-90 283
Msa0494660 MtrunA17_Chr1g0174461 34.554 437 268 9 1 425 71 501 1.60e-89 281
Msa0494660 MtrunA17_Chr7g0258221 36.674 439 258 10 1 425 69 501 3.29e-89 280
Msa0494660 MtrunA17_Chr1g0174481 33.410 434 274 7 1 425 69 496 3.49e-89 280
Msa0494660 MtrunA17_Chr7g0246121 35.198 429 266 5 1 421 69 493 2.74e-88 277
Msa0494660 MtrunA17_Chr5g0430111 42.618 359 191 6 1 349 72 425 3.12e-88 275
Msa0494660 MtrunA17_Chr1g0164211 33.718 433 274 6 1 426 66 492 1.22e-87 275
Msa0494660 MtrunA17_Chr7g0246151 33.941 439 260 6 1 421 69 495 1.57e-87 275
Msa0494660 MtrunA17_Chr8g0362701 34.396 439 267 10 1 425 70 501 3.00e-87 275
Msa0494660 MtrunA17_Chr8g0356001 34.943 435 268 7 1 426 76 504 3.12e-87 275
Msa0494660 MtrunA17_Chr5g0401681 35.506 445 255 10 3 433 69 495 2.54e-86 272
Msa0494660 MtrunA17_Chr1g0174441 34.475 438 269 9 1 425 91 523 3.59e-86 273
Msa0494660 MtrunA17_Chr1g0200961 35.666 443 269 6 1 434 63 498 6.88e-86 271
Msa0494660 MtrunA17_Chr7g0255531 32.624 423 261 6 5 412 67 480 2.00e-85 270
Msa0494660 MtrunA17_Chr5g0395331 33.257 439 271 8 1 425 72 502 4.81e-85 269
Msa0494660 MtrunA17_Chr5g0395321 33.100 429 273 7 1 425 77 495 1.19e-84 269
Msa0494660 MtrunA17_Chr2g0314721 36.453 406 246 6 1 399 79 479 3.29e-84 266
Msa0494660 MtrunA17_Chr1g0213671 36.425 442 263 9 1 428 70 507 4.78e-84 267
Msa0494660 MtrunA17_Chr6g0463621 58.333 204 80 3 229 428 1 203 2.93e-83 254
Msa0494660 MtrunA17_Chr2g0314731 35.468 406 250 6 1 399 68 468 3.28e-83 263
Msa0494660 MtrunA17_Chr1g0205371 36.111 432 263 6 1 425 70 495 3.93e-83 264
Msa0494660 MtrunA17_Chr6g0451751 33.183 443 271 7 3 424 80 518 6.57e-83 264
Msa0494660 MtrunA17_Chr1g0176831 33.333 408 256 6 1 399 98 498 3.36e-82 262
Msa0494660 MtrunA17_Chr4g0039901 33.726 424 269 6 1 417 70 488 3.41e-82 261
Msa0494660 MtrunA17_Chr4g0053621 35.766 411 231 9 21 414 86 480 4.30e-82 261
Msa0494660 MtrunA17_Chr7g0246181 35.363 427 262 6 1 417 69 491 7.93e-82 260
Msa0494660 MtrunA17_Chr1g0207841 31.306 444 282 8 3 425 75 516 1.81e-81 260
Msa0494660 MtrunA17_Chr5g0445371 48.846 260 98 4 166 424 1 226 1.86e-81 251
Msa0494660 MtrunA17_Chr6g0451691 32.886 447 271 7 3 424 80 522 5.73e-81 259
Msa0494660 MtrunA17_Chr7g0258211 33.921 454 261 11 1 433 74 509 5.97e-81 258
Msa0494660 MtrunA17_Chr4g0008101 35.650 446 258 9 3 424 78 518 8.96e-81 258
Msa0494660 MtrunA17_Chr5g0401691 33.806 423 254 8 3 415 88 494 1.22e-80 258
Msa0494660 MtrunA17_Chr4g0030701 31.991 447 280 9 1 425 70 514 3.77e-80 257
Msa0494660 MtrunA17_Chr4g0046321 30.942 446 278 11 3 426 73 510 7.82e-80 256
Msa0494660 MtrunA17_Chr6g0451741 32.511 446 273 6 3 424 99 540 1.97e-79 256
Msa0494660 MtrunA17_Chr4g0030711 31.390 446 281 9 3 425 74 517 3.50e-79 254
Msa0494660 MtrunA17_Chr8g0351801 32.080 452 281 9 1 428 69 518 3.69e-79 254
Msa0494660 MtrunA17_Chr7g0254641 31.746 441 278 7 1 422 72 508 1.10e-78 253
Msa0494660 MtrunA17_Chr8g0355961 35.402 435 266 7 1 426 76 504 2.06e-78 252
Msa0494660 MtrunA17_Chr7g0224551 31.532 444 276 9 3 425 69 505 3.09e-78 251
Msa0494660 MtrunA17_Chr6g0451781 33.108 444 270 8 3 424 113 551 3.60e-78 253
Msa0494660 MtrunA17_Chr5g0395381 32.553 427 253 8 1 425 77 470 4.11e-78 250
Msa0494660 MtrunA17_Chr5g0430071 39.944 358 200 6 78 425 2 354 5.23e-78 246
Msa0494660 MtrunA17_Chr5g0445751 53.913 230 103 2 1 229 80 307 6.39e-78 244
Msa0494660 MtrunA17_Chr7g0224561 31.910 445 273 9 3 425 69 505 4.27e-77 248
Msa0494660 MtrunA17_Chr7g0246131 33.882 425 271 4 1 416 69 492 3.73e-76 246
Msa0494660 MtrunA17_Chr5g0445351 66.061 165 56 0 257 421 52 216 1.18e-75 235
Msa0494660 MtrunA17_Chr3g0082701 32.735 446 272 7 3 424 78 519 3.07e-75 244
Msa0494660 MtrunA17_Chr4g0046351 29.581 453 275 11 3 426 73 510 7.11e-75 243
Msa0494660 MtrunA17_Chr2g0304871 33.489 427 264 7 3 414 78 499 1.52e-74 242
Msa0494660 MtrunA17_Chr4g0052861 31.891 439 264 9 1 426 67 483 2.90e-74 241
Msa0494660 MtrunA17_Chr4g0046331 29.451 455 275 12 3 426 73 512 1.75e-73 239
Msa0494660 MtrunA17_Chr6g0451641 31.222 442 276 11 3 424 78 511 4.91e-73 238
Msa0494660 MtrunA17_Chr4g0039391 32.488 434 271 8 3 424 72 495 6.07e-73 238
Msa0494660 MtrunA17_Chr8g0339331 32.798 436 263 9 2 417 77 502 1.07e-72 237
Msa0494660 MtrunA17_Chr1g0197891 32.857 420 267 8 1 413 69 480 7.04e-72 234
Msa0494660 MtrunA17_Chr6g0466901 32.787 427 262 10 3 408 73 495 1.01e-71 234
Msa0494660 MtrunA17_Chr1g0197881 32.857 420 267 8 1 413 68 479 1.12e-71 234
Msa0494660 MtrunA17_Chr6g0458561 32.110 436 263 9 2 417 93 515 1.16e-71 235
Msa0494660 MtrunA17_Chr6g0466941 32.791 430 259 10 3 408 73 496 1.86e-71 234
Msa0494660 MtrunA17_Chr5g0445761 60.406 197 78 0 229 425 1 197 2.82e-71 223
Msa0494660 MtrunA17_Chr1g0197851 32.619 420 268 8 1 413 69 480 8.51e-71 231
Msa0494660 MtrunA17_Chr8g0339311 31.603 443 278 11 3 425 83 520 1.94e-70 231
Msa0494660 MtrunA17_Chr1g0197871 33.333 417 257 10 1 407 69 474 4.26e-70 229
Msa0494660 MtrunA17_Chr4g0052851 31.463 410 260 7 3 409 71 462 6.14e-70 229
Msa0494660 MtrunA17_Chr1g0160861 36.280 328 197 4 99 426 21 336 1.21e-69 224
Msa0494660 MtrunA17_Chr4g0046631 31.395 430 266 8 3 414 85 503 3.90e-68 225
Msa0494660 MtrunA17_Chr4g0058211 46.009 213 113 1 212 424 2 212 5.52e-68 215
Msa0494660 MtrunA17_Chr4g0011851 48.768 203 104 0 221 423 8 210 8.67e-68 215
Msa0494660 MtrunA17_Chr4g0017411 31.796 412 258 8 3 410 68 460 1.77e-67 223
Msa0494660 MtrunA17_Chr4g0011941 50.000 194 97 0 232 425 4 197 4.12e-67 213
Msa0494660 MtrunA17_Chr2g0310351 48.969 194 99 0 232 425 4 197 4.21e-67 213
Msa0494660 MtrunA17_Chr3g0101541 67.647 136 44 0 277 412 1 136 5.85e-66 207
Msa0494660 MtrunA17_Chr2g0296651 31.517 422 258 8 3 410 68 472 2.02e-65 218
Msa0494660 MtrunA17_Chr4g0052881 30.583 412 255 9 20 417 86 480 1.11e-64 216
Msa0494660 MtrunA17_Chr6g0451681 32.084 427 234 8 3 425 100 474 1.32e-64 215
Msa0494660 MtrunA17_Chr8g0390871 45.673 208 111 2 219 425 17 223 5.39e-64 206
Msa0494660 MtrunA17_Chr1g0200951 31.081 444 261 13 1 421 100 521 2.08e-62 210
Msa0494660 MtrunA17_Chr6g0463611 42.291 227 125 3 1 226 87 308 3.79e-61 201
Msa0494660 MtrunA17_Chr5g0445361 62.879 132 49 0 299 430 8 139 1.04e-59 191
Msa0494660 MtrunA17_Chr1g0210091 28.798 441 292 10 3 427 103 537 1.19e-58 201
Msa0494660 MtrunA17_Chr5g0419451 31.436 404 255 11 1 394 95 486 1.36e-58 200
Msa0494660 MtrunA17_Chr4g0076171 51.053 190 66 4 245 428 1 169 3.28e-57 186
Msa0494660 MtrunA17_Chr2g0296661 29.630 432 267 9 3 415 69 482 4.89e-57 195
Msa0494660 MtrunA17_Chr5g0432751 27.660 423 287 8 3 412 71 487 8.31e-56 192
Msa0494660 MtrunA17_Chr8g0346261 30.788 406 255 11 1 394 122 513 2.19e-53 187
Msa0494660 MtrunA17_Chr8g0377341 29.909 438 267 13 1 421 104 518 3.96e-53 186
Msa0494660 MtrunA17_Chr3g0107541 28.467 411 275 8 3 397 90 497 1.31e-50 179
Msa0494660 MtrunA17_Chr5g0423621 40.884 181 105 1 245 425 1 179 6.46e-50 167
Msa0494660 MtrunA17_Chr6g0451811 41.089 202 114 2 225 424 1 199 3.31e-49 166
Msa0494660 MtrunA17_Chr2g0314781 45.806 155 84 0 245 399 1 155 1.41e-48 163
Msa0494660 MtrunA17_Chr5g0430041 46.591 176 87 2 255 423 1 176 2.78e-48 163
Msa0494660 MtrunA17_Chr1g0174431 38.725 204 116 3 229 425 1 202 2.17e-47 162
Msa0494660 MtrunA17_Chr3g0086681 45.882 170 83 2 265 430 1 165 2.31e-47 160
Msa0494660 MtrunA17_Chr2g0280081 28.306 431 285 12 1 415 68 490 1.99e-46 171
Msa0494660 MtrunA17_Chr2g0280081 27.689 437 292 12 1 421 569 997 2.02e-46 171
Msa0494660 MtrunA17_Chr8g0370651 26.697 442 286 11 3 418 84 513 3.90e-46 167
Msa0494660 MtrunA17_Chr6g0451771 40.099 202 116 2 225 424 18 216 1.11e-45 158
Msa0494660 MtrunA17_Chr8g0370641 26.471 442 287 11 3 418 80 509 3.50e-45 164
Msa0494660 MtrunA17_Chr5g0430151 45.349 172 93 1 255 425 1 172 4.70e-45 154
Msa0494660 MtrunA17_Chr4g0046681 38.119 202 116 3 222 421 28 222 1.17e-44 155
Msa0494660 MtrunA17_Chr1g0198191 27.083 432 294 12 3 418 85 511 1.68e-44 162
Msa0494660 MtrunA17_Chr2g0280121 26.728 434 298 11 3 421 74 502 1.97e-44 162
Msa0494660 MtrunA17_Chr3g0107611 26.056 426 287 7 3 405 90 510 3.49e-44 161
Msa0494660 MtrunA17_Chr3g0117301 53.846 117 54 0 280 396 1 117 1.75e-43 148
Msa0494660 MtrunA17_Chr2g0280071 27.273 440 286 12 3 421 103 529 2.46e-43 161
Msa0494660 MtrunA17_Chr2g0280041 26.339 448 280 14 3 421 102 528 4.78e-42 155
Msa0494660 MtrunA17_Chr4g0074581 27.752 436 289 13 3 421 109 535 2.23e-41 154
Msa0494660 MtrunA17_Chr8g0387101 26.389 432 297 10 1 416 70 496 1.64e-40 151
Msa0494660 MtrunA17_Chr8g0364651 28.713 404 261 13 30 418 97 488 4.39e-40 149
Msa0494660 MtrunA17_Chr1g0174421 33.475 236 148 6 1 229 83 316 2.68e-39 144
Msa0494660 MtrunA17_Chr3g0116731 47.333 150 62 3 280 428 1 134 5.93e-39 137
Msa0494660 MtrunA17_Chr4g0028321 50.000 130 64 1 297 425 25 154 1.13e-38 137
Msa0494660 MtrunA17_Chr5g0402981 39.326 178 102 3 240 414 3 177 1.29e-38 138
Msa0494660 MtrunA17_Chr5g0413911 25.282 443 296 13 3 416 82 518 2.03e-38 145
Msa0494660 MtrunA17_Chr6g0477081 31.907 257 153 4 89 339 1 241 3.86e-38 138
Msa0494660 MtrunA17_Chr5g0409051 26.411 443 285 13 5 421 74 501 5.67e-38 144
Msa0494660 MtrunA17_Chr4g0046701 43.448 145 77 2 272 414 2 143 2.40e-35 128
Msa0494660 MtrunA17_Chr2g0334021 23.864 440 297 10 3 423 73 493 4.06e-35 136
Msa0494660 MtrunA17_Chr4g0011931 33.766 231 145 3 3 227 67 295 4.46e-35 131
Msa0494660 MtrunA17_Chr4g0011861 32.759 232 147 3 3 227 67 296 5.23e-35 132
Msa0494660 MtrunA17_Chr4g0046661 36.782 174 108 1 222 393 18 191 5.42e-34 127
Msa0494660 MtrunA17_Chr3g0116721 34.211 190 119 2 72 255 1 190 7.70e-34 125
Msa0494660 MtrunA17_Chr2g0280011 36.318 201 118 4 228 421 7 204 3.19e-33 124
Msa0494660 MtrunA17_Chr2g0280061 36.181 199 117 4 228 419 7 202 1.03e-31 120
Msa0494660 MtrunA17_Chr5g0445411 55.319 94 42 0 1 94 82 175 2.47e-30 115
Msa0494660 MtrunA17_Chr4g0030741 28.516 256 170 7 3 252 101 349 3.49e-30 119
Msa0494660 MtrunA17_Chr5g0444981 38.798 183 111 1 231 413 13 194 1.78e-29 114
Msa0494660 MtrunA17_Chr5g0431601 60.241 83 32 1 1 83 1 82 1.45e-28 107
Msa0494660 MtrunA17_Chr5g0430171 42.767 159 86 2 1 157 72 227 6.67e-28 110
Msa0494660 MtrunA17_Chr4g0076181 61.333 75 29 0 1 75 1 75 1.58e-27 107
Msa0494660 MtrunA17_Chr4g0076181 37.234 94 57 1 133 226 70 161 9.77e-15 71.6
Msa0494660 MtrunA17_Chr8g0364631 26.267 434 277 12 11 418 80 496 3.14e-27 113
Msa0494660 MtrunA17_Chr5g0445341 59.036 83 33 1 1 82 1 83 4.80e-27 103
Msa0494660 MtrunA17_Chr5g0396521 28.617 311 168 10 150 421 268 563 5.61e-27 113
Msa0494660 MtrunA17_Chr4g0046691 29.694 229 152 4 3 227 78 301 1.02e-26 109
Msa0494660 MtrunA17_Chr2g0313791 25.234 321 227 6 83 396 170 484 1.61e-26 111
Msa0494660 MtrunA17_Chr2g0313781 24.922 321 228 6 83 396 187 501 3.66e-26 110
Msa0494660 MtrunA17_Chr5g0431631 62.667 75 28 0 1 75 87 161 6.95e-26 102
Msa0494660 MtrunA17_Chr2g0313811 24.611 321 229 6 83 396 187 501 8.68e-26 109
Msa0494660 MtrunA17_Chr2g0288661 23.261 417 295 13 6 410 103 506 9.63e-26 109
Msa0494660 MtrunA17_Chr8g0354571 25.175 429 284 15 6 415 109 519 1.55e-25 108
Msa0494660 MtrunA17_Chr8g0381571 28.326 233 150 7 165 392 235 455 1.68e-25 108
Msa0494660 MtrunA17_Chr8g0381541 28.326 233 150 7 165 392 235 455 1.85e-25 108
Msa0494660 MtrunA17_Chr2g0307291 26.562 320 222 6 84 396 178 491 3.79e-25 107
Msa0494660 MtrunA17_Chr4g0046671 28.870 239 152 5 3 227 83 317 5.02e-25 104
Msa0494660 MtrunA17_Chr2g0313751 24.118 340 242 7 84 413 203 536 1.61e-24 105
Msa0494660 MtrunA17_Chr3g0105761 30.208 192 120 3 235 423 6 186 2.60e-24 100
Msa0494660 MtrunA17_Chr2g0313821 23.229 353 253 8 55 396 144 489 4.18e-24 104
Msa0494660 MtrunA17_Chr2g0293411 30.180 222 139 7 176 392 243 453 4.23e-24 104
Msa0494660 MtrunA17_Chr8g0351391 24.590 366 248 10 51 396 126 483 7.17e-24 103
Msa0494660 MtrunA17_Chr2g0313801 23.729 354 250 9 55 396 144 489 7.88e-24 103
Msa0494660 MtrunA17_Chr2g0313831 22.850 407 283 12 5 396 99 489 1.19e-23 103
Msa0494660 MtrunA17_Chr2g0307301 26.250 320 223 6 84 396 178 491 2.17e-23 102
Msa0494660 MtrunA17_Chr4g0030761 33.974 156 76 5 280 425 1 139 2.47e-23 95.5
Msa0494660 MtrunA17_Chr8g0354531 24.691 405 274 12 6 396 231 618 3.12e-23 102
Msa0494660 MtrunA17_Chr3g0107551 30.675 163 110 1 235 394 11 173 6.53e-23 96.3
Msa0494660 MtrunA17_Chr8g0351441 23.056 373 254 10 55 402 123 487 7.60e-23 100
Msa0494660 MtrunA17_Chr5g0402971 29.091 220 134 5 3 205 79 293 8.52e-23 98.6
Msa0494660 MtrunA17_Chr0c19g0493771 21.814 408 300 9 3 399 224 623 2.40e-22 99.8
Msa0494660 MtrunA17_Chr2g0310371 50.602 83 41 0 1 83 63 145 2.61e-22 92.8
Msa0494660 MtrunA17_Chr8g0351401 24.468 376 241 11 51 396 120 482 2.71e-22 99.4
Msa0494660 MtrunA17_Chr6g0484771 35.156 128 81 1 1 126 1 128 3.11e-22 92.4
Msa0494660 MtrunA17_Chr8g0351421 22.656 384 250 10 51 402 120 488 4.59e-22 98.6
Msa0494660 MtrunA17_Chr3g0101641 47.727 88 42 1 111 194 2 89 4.90e-22 90.1
Msa0494660 MtrunA17_Chr8g0351461 22.667 375 261 8 51 402 119 487 5.71e-22 98.2
Msa0494660 MtrunA17_Chr2g0313761 24.118 340 242 7 84 413 171 504 6.17e-22 98.2
Msa0494660 MtrunA17_Chr1g0179811 27.612 268 175 10 159 423 283 534 3.25e-21 96.3
Msa0494660 MtrunA17_Chr1g0204271 24.267 375 239 12 51 396 120 478 3.67e-21 95.9
Msa0494660 MtrunA17_Chr6g0472221 25.843 356 234 11 55 396 160 499 4.08e-21 95.9
Msa0494660 MtrunA17_Chr2g0314771 30.573 157 103 2 1 151 1 157 4.91e-21 89.7
Msa0494660 MtrunA17_Chr1g0203151 24.485 388 261 12 55 432 147 512 5.01e-21 95.5
Msa0494660 MtrunA17_Chr8g0351311 25.946 370 239 12 51 396 126 484 5.21e-21 95.5
Msa0494660 MtrunA17_Chr8g0354511 24.444 405 276 13 6 396 109 497 5.43e-21 95.5
Msa0494660 MtrunA17_Chr2g0313771 23.171 410 274 14 6 396 109 496 5.98e-21 95.1
Msa0494660 MtrunA17_Chr1g0207851 23.333 240 167 6 3 227 75 312 6.13e-21 93.6
Msa0494660 MtrunA17_Chr2g0293421 28.507 221 141 7 176 392 247 454 7.39e-21 94.7
Msa0494660 MtrunA17_Chr3g0117321 50.000 84 42 0 1 84 42 125 1.39e-20 87.0
Msa0494660 MtrunA17_Chr8g0362731 26.050 357 240 11 51 396 38 381 2.40e-20 92.4
Msa0494660 MtrunA17_Chr5g0446131 23.793 290 208 6 114 396 204 487 2.74e-20 93.2
Msa0494660 MtrunA17_Chr8g0339861 25.758 396 259 17 6 396 93 458 2.81e-20 93.2
Msa0494660 MtrunA17_Chr5g0445551 67.241 58 19 0 370 427 1 58 3.19e-20 84.0
Msa0494660 MtrunA17_Chr1g0203141 23.274 391 262 11 55 432 151 516 9.75e-20 91.7
Msa0494660 MtrunA17_Chr8g0334941 29.600 250 142 10 170 394 70 310 1.31e-19 89.4
Msa0494660 MtrunA17_Chr4g0014051 24.225 355 249 11 50 392 151 497 2.96e-19 90.1
Msa0494660 MtrunA17_Chr4g0004601 24.694 409 260 18 6 392 118 500 9.36e-19 88.6
Msa0494660 MtrunA17_Chr8g0334891 28.968 252 141 10 170 394 225 465 9.74e-19 88.2
Msa0494660 MtrunA17_Chr7g0235261 24.198 405 267 16 6 392 97 479 1.25e-18 88.2
Msa0494660 MtrunA17_Chr6g0451801 25.203 246 162 4 3 227 78 322 2.65e-18 85.5
Msa0494660 MtrunA17_Chr6g0479681 23.573 403 262 14 55 432 149 530 3.28e-18 87.0
Msa0494660 MtrunA17_Chr5g0400421 24.299 321 203 9 99 392 149 456 7.93e-18 85.5
Msa0494660 MtrunA17_Chr3g0135841 28.000 225 149 5 167 388 285 499 9.79e-18 85.5
Msa0494660 MtrunA17_Chr5g0400411 26.168 214 143 5 183 392 253 455 1.11e-17 85.1
Msa0494660 MtrunA17_Chr8g0372591 29.851 134 91 1 227 360 1 131 1.87e-17 79.0
Msa0494660 MtrunA17_Chr7g0215181 22.989 348 249 10 55 396 148 482 2.73e-17 84.0
Msa0494660 MtrunA17_Chr3g0128461 25.342 292 195 10 114 396 220 497 2.93e-17 84.0
Msa0494660 MtrunA17_Chr3g0105751 28.511 235 152 7 3 224 87 318 3.51e-17 82.8
Msa0494660 MtrunA17_Chr6g0457421 21.264 348 255 9 55 396 146 480 6.11e-17 82.8
Msa0494660 MtrunA17_Chr8g0364081 24.104 307 194 10 114 394 219 512 6.73e-17 82.8
Msa0494660 MtrunA17_Chr3g0141801 27.778 252 152 9 155 396 226 457 7.86e-17 82.4
Msa0494660 MtrunA17_Chr1g0154731 25.517 290 191 10 114 396 205 476 1.27e-16 82.0
Msa0494660 MtrunA17_Chr7g0219961 25.764 229 154 5 176 401 228 443 1.45e-16 81.6
Msa0494660 MtrunA17_Chr8g0387001 22.656 384 259 12 51 408 120 491 1.47e-16 81.6
Msa0494660 MtrunA17_Chr6g0455461 25.764 229 154 6 176 401 229 444 2.11e-16 81.3
Msa0494660 MtrunA17_Chr5g0403931 28.311 219 141 5 185 396 245 454 3.06e-16 80.5
Msa0494660 MtrunA17_Chr2g0328711 51.786 56 27 0 370 425 1 56 4.58e-16 72.4
Msa0494660 MtrunA17_Chr3g0078411 25.806 217 151 5 188 401 235 444 5.92e-16 79.7
Msa0494660 MtrunA17_Chr4g0063221 26.190 168 122 2 230 396 326 492 2.71e-15 77.8
Msa0494660 MtrunA17_Chr1g0151221 27.941 204 143 4 188 388 289 491 2.99e-15 77.8
Msa0494660 MtrunA17_Chr8g0372411 29.279 222 140 6 175 392 238 446 1.02e-14 75.9
Msa0494660 MtrunA17_Chr4g0038271 22.554 368 261 11 51 396 168 533 1.93e-14 75.5
Msa0494660 MtrunA17_Chr8g0354541 29.412 153 105 3 245 396 1 151 3.40e-14 70.5
Msa0494660 MtrunA17_Chr3g0107561 25.957 235 151 7 3 220 85 313 1.01e-13 72.0
Msa0494660 MtrunA17_Chr1g0176851 24.370 238 168 6 53 283 2 234 1.17e-13 70.5
Msa0494660 MtrunA17_Chr5g0445641 44.304 79 44 0 68 146 23 101 1.23e-13 67.0
Msa0494660 MtrunA17_Chr4g0056981 43.662 71 40 0 255 325 1 71 1.51e-13 65.5
Msa0494660 MtrunA17_Chr5g0445651 50.000 54 27 0 225 278 6 59 4.21e-13 63.9
Msa0494660 MtrunA17_Chr3g0089361 28.017 232 144 10 171 396 237 451 4.28e-13 70.9
Msa0494660 MtrunA17_Chr2g0308651 24.194 248 172 6 163 396 143 388 5.66e-13 70.5
Msa0494660 MtrunA17_Chr5g0429651 22.938 388 253 15 51 408 123 494 8.41e-13 70.1
Msa0494660 MtrunA17_Chr7g0248991 28.244 131 92 2 217 347 223 351 1.17e-12 68.9
Msa0494660 MtrunA17_Chr3g0104351 24.324 259 173 7 167 408 250 502 1.77e-12 69.3
Msa0494660 MtrunA17_Chr3g0089351 27.468 233 144 10 171 396 155 369 2.13e-12 68.6
Msa0494660 MtrunA17_Chr6g0472171 30.469 128 86 3 283 408 18 144 4.18e-12 63.9
Msa0494660 MtrunA17_Chr6g0478161 26.738 187 127 5 216 395 281 464 4.47e-12 67.8
Msa0494660 MtrunA17_Chr8g0372331 29.565 115 76 2 307 418 2 114 1.30e-11 62.0
Msa0494660 MtrunA17_Chr1g0163501 26.070 257 156 10 153 392 229 468 1.88e-11 65.9
Msa0494660 MtrunA17_Chr7g0262111 20.286 419 298 11 5 410 98 493 7.41e-11 63.9
Msa0494660 MtrunA17_Chr3g0119681 21.615 421 287 14 4 393 79 487 8.76e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0494660 AT3G26310.1 43.779 434 230 5 1 425 65 493 1.40e-130 386
Msa0494660 AT3G26300.1 43.088 434 233 5 1 425 66 494 7.09e-128 379
Msa0494660 AT3G26210.1 44.598 435 228 5 1 425 66 497 6.33e-127 377
Msa0494660 AT3G26320.1 40.961 437 244 5 1 428 66 497 1.38e-125 373
Msa0494660 AT3G26330.1 40.961 437 244 5 1 428 66 497 5.82e-121 361
Msa0494660 AT5G57260.1 42.792 437 234 6 1 425 65 497 3.14e-120 360
Msa0494660 AT1G13110.1 40.547 439 250 7 1 429 67 504 2.56e-118 355
Msa0494660 AT5G25120.1 42.069 435 238 5 1 427 64 492 1.59e-116 350
Msa0494660 AT3G26280.1 42.308 442 232 10 1 427 67 500 2.58e-114 345
Msa0494660 AT3G26280.2 42.308 442 232 10 1 427 84 517 4.83e-114 344
Msa0494660 AT4G36220.1 39.318 440 248 7 2 425 76 512 5.46e-114 344
Msa0494660 AT3G26290.1 42.273 440 234 6 1 428 66 497 2.90e-113 342
Msa0494660 AT3G26290.2 42.273 440 234 6 1 428 79 510 4.67e-113 342
Msa0494660 AT3G26270.1 40.682 440 245 7 1 429 67 501 2.96e-112 339
Msa0494660 AT5G25140.1 41.972 436 237 6 1 427 64 492 1.42e-111 337
Msa0494660 AT5G25180.1 40.323 434 243 6 1 425 64 490 4.86e-111 336
Msa0494660 AT5G25130.1 40.185 433 249 4 1 427 64 492 4.22e-110 333
Msa0494660 AT1G13080.1 38.940 434 251 6 3 425 68 498 4.99e-110 333
Msa0494660 AT1G13090.2 40.385 416 229 7 3 405 65 474 1.04e-109 332
Msa0494660 AT5G07990.1 38.182 440 254 6 1 430 68 499 4.11e-109 332
Msa0494660 AT2G02580.1 43.249 437 234 5 1 428 66 497 1.19e-108 330
Msa0494660 AT3G48310.1 36.603 418 258 2 1 417 67 478 3.15e-107 326
Msa0494660 AT3G26230.1 40.590 441 243 8 3 429 63 498 3.66e-107 326
Msa0494660 AT3G26180.1 37.844 436 258 6 1 425 65 498 1.06e-106 325
Msa0494660 AT4G31500.1 40.230 435 242 8 3 425 67 495 1.92e-106 324
Msa0494660 AT3G48280.1 36.038 419 262 2 1 418 65 478 3.98e-106 323
Msa0494660 AT2G30770.1 37.731 432 256 5 1 425 68 493 1.17e-105 322
Msa0494660 AT3G48270.1 36.364 418 259 2 1 417 66 477 3.21e-105 321
Msa0494660 AT5G24950.1 37.037 432 260 5 1 425 67 493 8.20e-105 320
Msa0494660 AT3G26170.1 37.385 436 260 6 1 425 65 498 9.62e-104 317
Msa0494660 AT4G13310.1 37.413 433 258 4 1 425 67 494 7.26e-103 315
Msa0494660 AT3G48300.1 37.089 426 257 3 1 425 64 479 8.09e-103 314
Msa0494660 AT3G48300.2 37.089 426 257 3 1 425 66 481 8.57e-103 314
Msa0494660 AT1G13100.1 39.753 405 234 5 3 397 62 466 1.05e-102 314
Msa0494660 AT2G24180.1 40.000 430 240 6 5 425 75 495 2.05e-102 314
Msa0494660 AT5G04330.1 38.776 441 248 11 1 425 67 501 1.31e-100 310
Msa0494660 AT3G26150.1 36.927 436 262 6 1 425 65 498 8.28e-99 305
Msa0494660 AT3G48290.1 35.885 418 261 2 1 417 68 479 6.89e-98 302
Msa0494660 AT3G26160.1 36.927 436 262 6 1 425 65 498 7.77e-98 302
Msa0494660 AT1G11610.1 37.037 432 259 5 1 425 68 493 8.63e-98 302
Msa0494660 AT2G45570.1 36.927 436 261 6 1 425 73 505 1.62e-97 301
Msa0494660 AT3G48320.1 37.081 418 256 2 1 417 67 478 3.15e-97 300
Msa0494660 AT5G35715.1 36.927 436 261 8 1 425 1 433 3.97e-96 296
Msa0494660 AT2G30750.1 37.037 432 259 5 1 425 68 493 4.47e-96 297
Msa0494660 AT4G13290.1 35.945 434 255 6 1 425 68 487 6.14e-96 297
Msa0494660 AT3G26190.1 38.041 439 260 7 1 429 63 499 1.04e-95 296
Msa0494660 AT3G44250.1 39.120 432 250 5 3 424 65 493 1.05e-95 296
Msa0494660 AT1G11610.2 36.941 425 255 5 1 418 68 486 1.68e-95 296
Msa0494660 AT4G13770.1 35.714 434 267 5 1 425 66 496 3.93e-95 295
Msa0494660 AT3G26200.1 38.851 435 254 7 1 425 63 495 6.36e-95 295
Msa0494660 AT3G26220.1 40.000 440 247 8 3 429 66 501 1.85e-94 293
Msa0494660 AT5G44620.1 36.028 433 264 5 3 427 83 510 6.34e-94 293
Msa0494660 AT3G61040.1 37.327 434 255 6 1 425 68 493 1.66e-93 291
Msa0494660 AT3G26830.1 35.817 416 248 7 3 405 65 474 1.34e-92 288
Msa0494660 AT3G48290.2 33.784 444 261 3 1 417 68 505 5.82e-92 287
Msa0494660 AT2G45560.1 36.219 439 259 9 1 425 73 504 9.02e-92 287
Msa0494660 AT2G45550.1 35.294 442 273 6 1 432 73 511 1.82e-91 286
Msa0494660 AT4G12320.1 33.949 433 272 6 3 425 79 507 4.11e-90 283
Msa0494660 AT4G12300.1 35.402 435 261 8 3 425 79 505 1.19e-89 281
Msa0494660 AT4G22710.1 33.949 433 271 7 1 425 89 514 1.23e-89 281
Msa0494660 AT3G53280.1 36.613 437 265 6 1 428 63 496 1.75e-89 280
Msa0494660 AT5G24960.1 37.037 432 260 5 1 425 68 494 2.33e-89 280
Msa0494660 AT4G22690.1 33.949 433 271 7 1 425 120 545 2.51e-89 282
Msa0494660 AT5G06900.1 34.873 433 262 8 1 425 69 489 1.26e-88 278
Msa0494660 AT2G40890.1 34.988 423 251 7 5 412 66 479 1.50e-88 278
Msa0494660 AT2G45580.1 36.508 441 256 8 1 425 73 505 2.78e-88 278
Msa0494660 AT1G13080.2 37.640 356 208 6 81 425 28 380 3.89e-88 273
Msa0494660 AT4G12310.1 33.256 433 275 6 3 425 81 509 5.41e-87 275
Msa0494660 AT4G12330.1 34.562 434 264 8 3 425 83 507 1.62e-85 271
Msa0494660 AT1G33720.1 34.615 442 276 7 1 432 73 511 1.67e-85 270
Msa0494660 AT1G33730.1 36.264 364 220 5 68 422 5 365 1.76e-83 261
Msa0494660 AT1G33730.2 36.264 364 220 5 68 422 5 365 1.76e-83 261
Msa0494660 AT5G42590.1 37.037 432 261 6 1 425 67 494 3.19e-83 264
Msa0494660 AT3G53300.1 36.239 436 264 8 1 425 63 495 9.65e-83 263
Msa0494660 AT1G01280.1 34.325 437 264 7 1 421 67 496 3.14e-82 262
Msa0494660 AT4G37320.1 34.642 433 249 10 2 421 70 481 8.85e-78 250
Msa0494660 AT2G42250.1 31.390 446 280 8 1 432 76 509 9.97e-78 250
Msa0494660 AT3G52970.1 32.207 444 285 8 1 429 72 514 3.88e-77 249
Msa0494660 AT1G33720.4 35.171 381 235 6 61 432 2 379 7.74e-77 244
Msa0494660 AT1G33720.3 35.171 381 235 6 61 432 2 379 7.74e-77 244
Msa0494660 AT1G33720.5 35.171 381 235 6 61 432 2 379 7.74e-77 244
Msa0494660 AT5G67310.1 33.412 422 257 12 3 415 80 486 3.58e-76 246
Msa0494660 AT3G28740.1 35.635 449 252 14 3 434 79 507 4.05e-76 246
Msa0494660 AT4G37400.1 33.803 426 258 9 3 418 68 479 4.26e-75 243
Msa0494660 AT3G52970.2 31.659 458 283 7 1 429 72 528 8.56e-75 243
Msa0494660 AT4G37330.1 34.906 424 245 8 2 415 70 472 1.17e-74 242
Msa0494660 AT1G74550.1 33.014 418 251 8 5 412 66 464 2.10e-74 241
Msa0494660 AT4G31940.1 32.366 448 275 9 1 424 70 513 6.80e-74 241
Msa0494660 AT2G45580.2 38.081 344 191 7 96 425 16 351 1.20e-73 235
Msa0494660 AT3G26180.2 41.797 256 146 2 171 425 111 364 5.99e-73 234
Msa0494660 AT4G37430.1 32.727 440 256 12 3 421 65 485 1.52e-72 236
Msa0494660 AT5G57220.1 33.647 425 253 9 3 417 67 472 1.95e-72 236
Msa0494660 AT4G37410.1 33.021 427 258 10 2 416 67 477 1.42e-71 234
Msa0494660 AT4G31970.1 32.301 452 269 10 1 424 70 512 4.43e-71 233
Msa0494660 AT1G33720.2 33.168 404 237 7 61 432 2 404 4.67e-71 230
Msa0494660 AT5G36220.1 32.075 424 263 7 1 415 74 481 5.29e-71 233
Msa0494660 AT4G37340.1 30.394 431 267 8 1 418 68 478 2.96e-70 231
Msa0494660 AT4G13310.2 36.474 329 197 3 1 322 67 390 1.24e-69 226
Msa0494660 AT5G10600.1 31.193 436 273 9 1 424 82 502 6.21e-69 228
Msa0494660 AT5G10610.1 31.178 433 277 8 1 425 68 487 7.55e-69 227
Msa0494660 AT3G20130.1 29.638 442 290 8 1 430 78 510 1.76e-68 226
Msa0494660 AT4G37360.1 31.455 426 263 8 1 415 68 475 2.24e-68 226
Msa0494660 AT3G20090.2 31.323 431 262 9 1 413 79 493 5.32e-68 225
Msa0494660 AT4G37310.1 30.206 437 279 9 3 423 69 495 6.92e-68 225
Msa0494660 AT3G32047.1 30.000 420 275 6 3 413 80 489 2.21e-67 223
Msa0494660 AT5G47990.1 30.047 426 276 7 1 415 78 492 2.42e-67 223
Msa0494660 AT3G20940.1 30.000 420 275 6 1 409 78 489 4.28e-67 223
Msa0494660 AT3G20950.1 31.690 426 267 8 1 413 82 496 1.21e-66 222
Msa0494660 AT4G37370.1 30.751 426 260 8 3 415 70 473 1.54e-66 221
Msa0494660 AT3G25180.1 32.319 427 264 8 3 415 78 493 2.76e-66 221
Msa0494660 AT1G74540.1 31.517 422 258 9 5 412 66 470 6.34e-66 219
Msa0494660 AT4G15350.1 30.047 426 275 7 1 413 71 486 7.68e-66 219
Msa0494660 AT2G23220.1 30.556 432 270 9 3 423 86 498 2.11e-65 218
Msa0494660 AT1G66540.1 31.662 379 228 7 52 417 4 364 2.33e-65 214
Msa0494660 AT3G53290.1 34.204 421 242 8 19 429 11 406 2.20e-64 213
Msa0494660 AT4G15360.1 29.907 428 284 7 8 426 83 503 5.85e-64 214
Msa0494660 AT1G50520.1 30.097 412 268 7 1 398 79 484 7.96e-64 214
Msa0494660 AT5G42580.1 29.452 438 278 8 1 427 75 492 2.28e-63 213
Msa0494660 AT3G20960.2 31.250 432 266 11 1 415 77 494 2.48e-63 213
Msa0494660 AT3G20130.2 29.356 419 275 8 24 430 73 482 2.94e-63 212
Msa0494660 AT2G14100.1 30.318 409 263 9 3 398 81 480 3.81e-63 212
Msa0494660 AT2G23190.1 30.415 434 266 8 3 422 115 526 2.64e-62 211
Msa0494660 AT2G25160.1 31.136 440 255 13 4 412 74 496 6.63e-62 209
Msa0494660 AT4G15330.1 28.538 424 285 6 1 415 74 488 7.72e-62 209
Msa0494660 AT5G09970.1 32.629 426 254 16 1 409 107 516 1.65e-61 208
Msa0494660 AT1G50560.1 28.764 445 282 9 1 425 79 508 2.14e-60 205
Msa0494660 AT4G31950.1 29.621 449 274 10 1 424 70 501 2.35e-60 205
Msa0494660 AT5G06905.1 27.826 460 295 9 1 429 66 519 3.88e-60 204
Msa0494660 AT3G20100.1 28.638 426 281 7 1 413 77 492 2.95e-59 202
Msa0494660 AT2G27000.1 28.638 426 279 8 1 412 75 489 4.98e-59 201
Msa0494660 AT3G20120.4 28.211 436 293 6 1 425 77 503 5.36e-59 201
Msa0494660 AT1G74110.1 30.269 446 270 12 1 422 102 530 7.95e-59 201
Msa0494660 AT1G28430.1 29.911 448 274 11 1 431 76 500 8.21e-59 201
Msa0494660 AT4G20240.1 31.667 360 234 5 1 354 68 421 3.59e-58 197
Msa0494660 AT4G15330.2 28.822 399 266 6 24 413 69 458 4.08e-57 196
Msa0494660 AT3G20110.1 29.330 433 287 7 1 425 75 496 7.32e-57 196
Msa0494660 AT3G20960.1 30.123 405 252 10 28 415 1 391 2.69e-55 189
Msa0494660 AT3G20140.1 28.132 423 282 8 1 413 78 488 5.97e-55 190
Msa0494660 AT4G15380.1 26.773 437 295 10 1 425 78 501 1.01e-54 190
Msa0494660 AT1G13710.1 29.724 434 278 13 1 421 86 505 2.43e-54 189
Msa0494660 AT2G46660.1 29.587 436 274 14 1 418 108 528 4.56e-54 188
Msa0494660 AT1G66540.2 32.581 310 188 6 111 417 14 305 9.44e-54 182
Msa0494660 AT2G30490.1 28.066 424 283 10 3 412 71 486 9.91e-53 184
Msa0494660 AT5G24960.2 34.650 329 204 4 1 323 68 391 3.74e-52 180
Msa0494660 AT3G61880.1 30.184 434 255 16 1 411 104 512 1.19e-51 182
Msa0494660 AT3G20090.1 37.500 256 148 4 162 413 108 355 1.44e-51 178
Msa0494660 AT3G61880.2 30.184 434 255 16 1 411 104 512 2.26e-51 182
Msa0494660 AT2G05180.1 29.096 354 241 4 1 348 77 426 4.63e-51 178
Msa0494660 AT3G20080.2 25.828 453 305 10 1 432 78 520 2.22e-50 178
Msa0494660 AT3G20080.1 25.828 453 305 10 1 432 78 520 2.22e-50 178
Msa0494660 AT3G20120.2 35.019 257 153 4 174 425 120 367 3.33e-50 174
Msa0494660 AT3G20120.3 35.019 257 153 4 174 425 120 367 3.33e-50 174
Msa0494660 AT3G20120.1 35.019 257 153 4 174 425 120 367 3.33e-50 174
Msa0494660 AT5G36220.2 33.784 296 180 5 120 415 56 335 3.91e-50 174
Msa0494660 AT1G01190.1 26.841 421 277 11 1 409 111 512 6.52e-49 175
Msa0494660 AT1G01190.2 26.841 421 277 11 1 409 116 517 7.45e-49 175
Msa0494660 AT2G27010.1 25.785 446 291 11 1 432 71 490 1.79e-48 173
Msa0494660 AT4G20240.2 31.611 329 214 4 1 324 68 390 2.22e-48 170
Msa0494660 AT1G64940.1 27.571 457 295 14 1 429 63 511 2.95e-48 172
Msa0494660 AT3G61040.2 31.940 335 211 6 1 326 68 394 3.57e-47 167
Msa0494660 AT1G58260.1 27.273 429 278 10 4 405 78 499 1.56e-46 168
Msa0494660 AT2G22330.1 26.540 422 285 8 3 405 98 513 2.25e-46 168
Msa0494660 AT4G39950.1 26.859 417 274 11 3 397 96 503 4.22e-46 167
Msa0494660 AT2G22330.2 26.540 422 285 8 3 405 121 536 4.78e-46 167
Msa0494660 AT4G39950.2 26.859 417 274 11 3 397 136 543 9.63e-46 167
Msa0494660 AT1G64950.1 27.571 457 295 15 1 429 62 510 1.51e-45 165
Msa0494660 AT2G12190.1 28.508 449 285 16 1 421 62 502 2.75e-45 164
Msa0494660 AT2G45580.3 32.249 338 205 8 1 322 73 402 3.32e-45 162
Msa0494660 AT3G20935.1 30.982 326 187 8 120 415 3 320 5.33e-45 160
Msa0494660 AT5G61320.1 28.899 436 267 13 3 421 71 480 2.34e-44 162
Msa0494660 AT1G79370.1 27.040 429 278 10 3 399 80 505 1.53e-43 160
Msa0494660 AT5G05260.2 26.593 455 285 13 3 428 81 515 3.55e-43 159
Msa0494660 AT1G11600.1 28.507 442 279 14 3 421 75 502 1.76e-42 157
Msa0494660 AT1G16400.1 26.829 410 274 6 10 396 91 497 2.54e-41 154
Msa0494660 AT3G10560.1 26.055 403 283 9 1 394 84 480 6.07e-41 152
Msa0494660 AT1G64930.1 26.503 449 293 15 1 421 62 501 3.03e-40 150
Msa0494660 AT5G04660.1 27.160 405 276 10 3 394 81 479 4.11e-40 150
Msa0494660 AT3G20080.4 25.700 393 261 10 61 432 1 383 8.64e-40 147
Msa0494660 AT3G20080.5 25.700 393 261 10 61 432 1 383 8.64e-40 147
Msa0494660 AT3G20080.6 25.700 393 261 10 61 432 1 383 8.64e-40 147
Msa0494660 AT3G20080.3 25.700 393 261 10 61 432 1 383 8.64e-40 147
Msa0494660 AT1G16410.1 25.333 450 297 8 8 434 90 523 1.07e-39 149
Msa0494660 AT5G05260.1 25.664 452 261 12 3 428 81 483 9.72e-39 146
Msa0494660 AT3G10570.1 26.914 405 276 11 3 394 83 480 2.18e-38 145
Msa0494660 AT5G04630.1 26.485 404 280 10 3 394 78 476 2.43e-38 145
Msa0494660 AT5G25900.1 24.942 433 290 12 3 417 81 496 9.04e-37 141
Msa0494660 AT3G03470.1 25.581 430 287 13 3 410 72 490 1.11e-36 140
Msa0494660 AT1G64900.1 26.906 446 291 16 1 421 61 496 3.44e-35 136
Msa0494660 AT2G25160.2 28.704 324 196 9 4 303 74 386 1.80e-32 127
Msa0494660 AT3G25180.2 27.914 326 213 7 3 314 78 395 7.10e-32 125
Msa0494660 AT1G13090.1 29.661 236 148 6 3 226 65 294 1.03e-31 123
Msa0494660 AT5G35917.1 26.344 372 229 9 3 350 83 433 1.22e-29 120
Msa0494660 AT3G53305.1 44.928 138 71 1 273 410 181 313 9.28e-29 115
Msa0494660 AT3G53305.1 34.756 164 99 4 1 156 1 164 2.71e-19 89.0
Msa0494660 AT1G16410.2 25.305 328 224 5 8 317 90 414 1.99e-27 113
Msa0494660 AT3G14640.1 24.306 432 284 14 5 415 100 509 2.05e-27 114
Msa0494660 AT3G14640.2 24.306 432 284 14 5 415 122 531 2.28e-27 114
Msa0494660 AT3G14610.1 24.235 425 292 14 5 415 99 507 8.41e-27 112
Msa0494660 AT3G14680.1 24.706 425 289 15 5 415 100 507 1.24e-26 112
Msa0494660 AT3G14620.1 23.419 427 297 17 2 415 101 510 1.02e-25 109
Msa0494660 AT3G14650.1 24.000 425 292 15 5 415 100 507 1.63e-25 109
Msa0494660 AT2G45510.1 25.067 371 244 13 51 396 119 480 1.99e-24 105
Msa0494660 AT4G15110.1 27.653 311 171 11 150 421 276 571 5.44e-24 105
Msa0494660 AT3G14660.1 23.294 425 295 15 5 415 100 507 2.16e-23 102
Msa0494660 AT4G20235.1 30.233 172 101 2 13 184 82 234 4.02e-23 100
Msa0494660 AT4G20235.1 31.159 138 80 3 260 396 207 330 8.58e-16 78.6
Msa0494660 AT2G44890.1 23.243 370 252 11 51 396 119 480 4.09e-23 102
Msa0494660 AT3G14630.1 25.874 286 201 8 114 396 204 481 1.07e-21 97.8
Msa0494660 AT3G14630.2 25.874 286 201 8 114 396 259 536 1.33e-21 97.8
Msa0494660 AT3G14660.2 22.432 370 269 10 52 415 4 361 1.71e-21 95.9
Msa0494660 AT3G14690.1 22.430 428 295 14 5 415 100 507 1.84e-21 97.1
Msa0494660 AT3G14690.2 22.430 428 295 14 5 415 135 542 1.90e-21 97.4
Msa0494660 AT3G53130.1 26.966 267 178 8 159 423 283 534 2.35e-21 97.1
Msa0494660 AT1G31800.1 30.846 201 129 7 226 423 371 564 5.82e-20 92.8
Msa0494660 AT1G11680.1 26.885 305 185 12 111 394 180 467 4.28e-19 89.7
Msa0494660 AT2G44890.2 24.865 370 228 14 51 396 119 462 7.28e-19 89.4
Msa0494660 AT1G05160.2 26.818 220 146 6 177 392 248 456 1.87e-18 87.8
Msa0494660 AT1G05160.1 26.818 220 146 6 177 392 248 456 1.87e-18 87.8
Msa0494660 AT2G26710.1 21.690 355 250 10 55 396 149 488 2.06e-18 87.8
Msa0494660 AT5G24910.1 24.242 297 199 8 114 396 221 505 2.80e-18 87.4
Msa0494660 AT5G24900.2 23.636 385 257 15 55 416 36 406 5.43e-18 85.9
Msa0494660 AT5G24900.1 23.360 381 263 13 55 416 153 523 7.36e-18 86.3
Msa0494660 AT2G26170.1 24.641 418 268 16 3 388 82 484 1.11e-17 85.5
Msa0494660 AT3G26125.1 22.812 377 244 11 58 396 138 505 1.31e-17 85.5
Msa0494660 AT2G26170.2 24.113 423 274 16 5 395 1 408 4.44e-17 83.6
Msa0494660 AT1G57750.1 23.108 251 179 5 161 405 236 478 1.89e-16 81.6
Msa0494660 AT1G19630.3 30.137 219 130 8 175 389 235 434 3.15e-16 80.9
Msa0494660 AT1G65340.1 25.869 259 176 7 156 403 230 483 3.20e-16 81.3
Msa0494660 AT1G19630.1 30.137 219 130 8 175 389 235 434 3.61e-16 80.9
Msa0494660 AT1G67110.1 25.874 286 199 6 114 396 208 483 4.70e-16 80.5
Msa0494660 AT2G32440.2 25.571 219 148 6 177 392 247 453 6.56e-16 80.1
Msa0494660 AT2G32440.1 25.571 219 148 6 177 392 247 453 6.56e-16 80.1
Msa0494660 AT1G63710.1 23.134 402 273 12 51 425 120 512 9.98e-16 79.7
Msa0494660 AT5G23190.1 21.984 373 257 13 58 403 155 520 1.40e-15 79.3
Msa0494660 AT5G52400.1 23.362 351 238 12 55 393 158 489 1.59e-15 79.0
Msa0494660 AT1G47620.1 22.500 280 199 8 154 418 239 515 1.73e-15 79.0
Msa0494660 AT5G38970.2 25.311 241 149 6 194 430 161 374 1.97e-15 78.2
Msa0494660 AT5G38970.4 25.311 241 149 6 194 430 161 374 1.97e-15 78.2
Msa0494660 AT5G38970.1 24.138 261 161 7 174 430 228 455 3.53e-15 77.8
Msa0494660 AT1G75130.1 23.776 286 201 6 114 396 205 476 4.16e-15 77.8
Msa0494660 AT5G52320.1 24.797 246 172 5 166 401 238 480 9.94e-15 76.6
Msa0494660 AT1G13150.1 22.252 373 257 10 51 396 124 490 9.99e-15 76.6
Msa0494660 AT5G52320.2 24.797 246 172 5 166 401 238 480 1.00e-14 76.6
Msa0494660 AT1G69500.1 22.439 410 232 13 51 396 109 496 2.00e-14 75.5
Msa0494660 AT1G13140.1 20.375 373 264 9 51 396 131 497 4.89e-14 74.3
Msa0494660 AT4G36380.1 26.339 224 155 5 175 394 269 486 5.34e-14 74.3
Msa0494660 AT1G01600.1 24.148 352 220 12 90 408 162 499 5.84e-14 74.3
Msa0494660 AT5G35920.1 33.333 111 72 1 286 394 6 116 1.09e-13 68.9
Msa0494660 AT1G19630.2 29.730 185 119 5 175 355 235 412 1.24e-13 72.8
Msa0494660 AT5G05690.3 25.126 199 138 4 199 394 132 322 1.25e-13 72.4
Msa0494660 AT5G02900.1 24.510 204 145 4 206 404 260 459 1.34e-13 72.8
Msa0494660 AT5G08250.1 21.867 375 254 12 58 403 94 458 1.37e-13 72.8
Msa0494660 AT5G08250.2 22.016 377 251 13 58 403 156 520 1.43e-13 73.2
Msa0494660 AT5G38450.1 24.217 351 247 10 55 396 149 489 1.65e-13 72.8
Msa0494660 AT3G19270.2 24.255 235 160 6 171 401 225 445 1.78e-13 72.4
Msa0494660 AT2G45560.2 25.862 232 153 8 1 218 73 299 1.90e-13 71.6
Msa0494660 AT2G46960.1 23.887 247 171 7 151 392 135 369 2.01e-13 72.0
Msa0494660 AT5G05690.1 25.126 199 138 4 199 394 251 441 2.15e-13 72.4
Msa0494660 AT2G27690.1 21.964 387 263 12 51 415 114 483 2.76e-13 72.0
Msa0494660 AT2G46960.2 23.887 247 171 7 151 392 251 485 3.11e-13 72.0
Msa0494660 AT3G50660.1 26.027 219 137 5 193 396 279 487 4.09e-13 71.6
Msa0494660 AT4G00360.1 23.650 389 255 15 51 408 120 497 5.63e-13 71.2
Msa0494660 AT1G73340.1 25.234 214 145 5 185 394 251 453 8.04e-13 70.5
Msa0494660 AT2G28850.1 22.685 216 158 4 185 395 248 459 9.31e-13 70.5
Msa0494660 AT5G58860.1 22.917 384 258 12 51 408 123 494 1.20e-12 70.1
Msa0494660 AT1G13140.2 24.571 175 122 2 232 396 297 471 2.29e-12 69.3
Msa0494660 AT2G34490.1 21.918 219 158 4 186 395 249 463 3.51e-12 68.6
Msa0494660 AT4G39510.1 21.739 253 178 6 167 403 237 485 4.05e-12 68.6
Msa0494660 AT2G45970.1 23.592 373 240 13 51 391 120 479 6.39e-12 67.8
Msa0494660 AT2G28860.1 22.326 215 158 4 186 395 249 459 7.06e-12 67.8
Msa0494660 AT2G45560.3 27.273 165 111 4 1 156 73 237 1.42e-11 64.7
Msa0494660 AT3G13730.2 28.761 226 140 9 171 392 251 459 1.70e-11 66.2
Msa0494660 AT1G24540.1 22.857 175 128 2 232 399 322 496 2.21e-11 66.2
Msa0494660 AT4G39490.1 20.588 238 170 4 185 403 259 496 2.65e-11 65.9
Msa0494660 AT3G30290.1 26.601 203 135 7 194 392 176 368 3.51e-11 65.1

Find 84 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGCTCATGCGACATTTA+AGG 0.139628 3_4:+22985273 None:intergenic
TGTGCTTTCTTCATTATTCT+TGG 0.153299 3_4:+22985808 None:intergenic
ACGACTACCTTAGTCTTAAT+TGG 0.214081 3_4:+22985613 None:intergenic
TTTCTCCTTATGGTAATTAT+TGG 0.222556 3_4:-22986878 Msa0494660:CDS
ACATCATTGATGAACATAAA+AGG 0.245163 3_4:-22986494 Msa0494660:CDS
ATTTGTTTCCTTCTTCTAAA+TGG 0.259346 3_4:-22986587 Msa0494660:CDS
TTCTACCATTGCCCAATCTA+TGG 0.288739 3_4:+22985843 None:intergenic
CGATGAAACTTCTCAATCTT+AGG 0.304055 3_4:+22986540 None:intergenic
ATTTCGATAGCTAGGACTTT+AGG 0.307633 3_4:+22986930 None:intergenic
TCCGGTTCAGTCCAATAGTT+TGG 0.333155 3_4:+22985565 None:intergenic
GAAGCTCATGCGACATTTAA+GGG 0.355850 3_4:+22985274 None:intergenic
AAATGGCTTCAATATGTTAC+CGG 0.356735 3_4:-22986570 Msa0494660:CDS
CTGGACATGACTGAGCAATT+TGG 0.357943 3_4:-22985349 Msa0494660:CDS
AACTTCGAGTACATTCCTTT+TGG 0.370721 3_4:-22985490 Msa0494660:CDS
TTCAATATGTTACCGGTTTG+AGG 0.382102 3_4:-22986563 Msa0494660:CDS
CCCTTAATGCATCTTCAACT+TGG 0.392661 3_4:-22987035 None:intergenic
TCGCAAGAGATCCAAACTAT+TGG 0.411329 3_4:-22985576 Msa0494660:CDS
AAAGAATCAGTAAAGATTGC+AGG 0.415548 3_4:-22986627 Msa0494660:CDS
CTCAAACCGAATGTGCTCCC+TGG 0.415828 3_4:+22985448 None:intergenic
CAATATACACAATTGTTTCA+AGG 0.416904 3_4:-22986701 Msa0494660:CDS
GGGCAATGGTAGAAATGATA+AGG 0.425387 3_4:-22985834 Msa0494660:CDS
ATTGTTTCAAGGGCTGCCTT+TGG 0.427212 3_4:-22986690 Msa0494660:CDS
CATCAGCGAGCACCATAGAT+TGG 0.430198 3_4:-22985855 Msa0494660:CDS
TGGAATCAAAAGTGAAGAAC+TGG 0.435607 3_4:-22985368 Msa0494660:CDS
AAGTCGATTGCTTCAGAGAA+TGG 0.437694 3_4:-22986759 Msa0494660:CDS
AGGTGAGGTAGCAGAAGATC+TGG 0.445366 3_4:-22986451 Msa0494660:CDS
CAATGTCAAGGCTATAATCT+TGG 0.445830 3_4:-22986370 Msa0494660:intron
TTTCATCAGCTGAGTTTGCT+AGG 0.453326 3_4:-22986992 Msa0494660:CDS
TATTGAAGCCATTTAGAAGA+AGG 0.456020 3_4:+22986579 None:intergenic
GTCTTTGCATTCTTTGCCAA+AGG 0.456099 3_4:+22986674 None:intergenic
AAACATCTTCTCTTATTGGT+TGG 0.458964 3_4:+22986796 None:intergenic
ACAGCTTCAGAGAAGTTGAT+TGG 0.462027 3_4:+22986732 None:intergenic
ATATGCCCAGGGAGCACATT+CGG 0.466235 3_4:-22985454 Msa0494660:CDS
CATTCTCTTGGTAGCAAAAG+AGG 0.469170 3_4:+22985670 None:intergenic
CATCATTGATGAACATAAAA+GGG 0.470825 3_4:-22986493 Msa0494660:CDS
TCAAATACCAATTAAGACTA+AGG 0.472288 3_4:-22985620 Msa0494660:CDS
AATATACACAATTGTTTCAA+GGG 0.477444 3_4:-22986700 Msa0494660:CDS
ATCAGCGAGCACCATAGATT+GGG 0.479867 3_4:-22985854 Msa0494660:CDS
CGGTTTGAGAAATGTTGAGC+TGG 0.485544 3_4:-22985434 Msa0494660:CDS
AGCTGATGAAATGACAATAG+TGG 0.485655 3_4:+22987004 None:intergenic
TTTAAGGGATGGTAAACAAA+AGG 0.493161 3_4:+22985289 None:intergenic
TCCAAACTATTGGACTGAAC+CGG 0.496230 3_4:-22985566 Msa0494660:CDS
AGACGTTCTCTTAAAATATG+AGG 0.498619 3_4:-22986427 Msa0494660:CDS
CTCTCGGGATAAAACTTCTC+CGG 0.502405 3_4:+22985547 None:intergenic
CTGTTGTCAAAGAAACCCTT+AGG 0.505787 3_4:-22985708 Msa0494660:CDS
GGCAATGGTAGAAATGATAA+GGG 0.505891 3_4:-22985833 Msa0494660:CDS
ATCAGCTGAGTTTGCTAGGG+AGG 0.509868 3_4:-22986988 Msa0494660:CDS
ACAACACTATTGACTACAAA+GGG 0.511174 3_4:-22985516 Msa0494660:CDS
CATGCTTTACCACATTCTCT+TGG 0.513581 3_4:+22985658 None:intergenic
TGTCTCCAATAATTACCATA+AGG 0.514650 3_4:+22986873 None:intergenic
ATTCTTCTTCCAGCACCAAA+AGG 0.515133 3_4:+22985475 None:intergenic
TCAAACCGAATGTGCTCCCT+GGG 0.518126 3_4:+22985449 None:intergenic
AGTGTTGTCAATGAATCTCT+CGG 0.522670 3_4:+22985531 None:intergenic
TTCATCAGCTGAGTTTGCTA+GGG 0.524169 3_4:-22986991 Msa0494660:CDS
CTCAATCTTAGGCCTCAAAC+CGG 0.527113 3_4:+22986551 None:intergenic
AAGACATGATTTCGATAGCT+AGG 0.527728 3_4:+22986922 None:intergenic
GCACTGAAGGATGTAACCTA+AGG 0.538593 3_4:+22985692 None:intergenic
TGTTGCAAAGTGAATATCAT+GGG 0.541604 3_4:+22986956 None:intergenic
GTGTTGTCAATGAATCTCTC+GGG 0.556284 3_4:+22985532 None:intergenic
TTGTTGCAAAGTGAATATCA+TGG 0.557598 3_4:+22986955 None:intergenic
CTAAGGTAGTCGTCAATGCA+TGG 0.564501 3_4:-22985603 Msa0494660:CDS
GGTAGCAAAAGAGGCACTGA+AGG 0.564956 3_4:+22985679 None:intergenic
AATGCATCTTCAACTTGGAG+AGG 0.568911 3_4:-22987030 Msa0494660:CDS
AGCACAAGATGAGGTGAGAG+AGG 0.569716 3_4:-22985791 Msa0494660:CDS
GATGTTCTCAAATATCTCAT+CGG 0.578404 3_4:+22986512 None:intergenic
AATGATACAACAACATCGCA+AGG 0.579852 3_4:+22985410 None:intergenic
GCTGGAAGAAGAATATGCCC+AGG 0.587425 3_4:-22985466 Msa0494660:CDS
AATGAAGAAAGCACAAGATG+AGG 0.590180 3_4:-22985800 Msa0494660:CDS
ATGATATTCACTTTGCAACA+AGG 0.591313 3_4:-22986953 Msa0494660:CDS
CTCATGCGACATTTAAGGGA+TGG 0.593691 3_4:+22985278 None:intergenic
GCAAAGAACACAAAAGTCAA+AGG 0.597545 3_4:-22986471 Msa0494660:CDS
TAAGGTAGTCGTCAATGCAT+GGG 0.602451 3_4:-22985602 Msa0494660:CDS
GACAACACTATTGACTACAA+AGG 0.614039 3_4:-22985517 Msa0494660:CDS
CACTGAAGGATGTAACCTAA+GGG 0.615506 3_4:+22985693 None:intergenic
GTTCTCTTAAAATATGAGGA+TGG 0.628590 3_4:-22986423 Msa0494660:CDS
GTTACGTAAAATCTGCACAT+TGG 0.630793 3_4:-22986850 Msa0494660:CDS
ATTAACAAAAGACAATGTCA+AGG 0.643919 3_4:-22986382 Msa0494660:CDS
GAATCAGTAAAGATTGCAGG+AGG 0.644134 3_4:-22986624 Msa0494660:CDS
GAGCACCATAGATTGGGCAA+TGG 0.662039 3_4:-22985848 Msa0494660:CDS
ATGATACAACAACATCGCAA+GGG 0.671703 3_4:+22985411 None:intergenic
GAACACAAAAGTCAAAGGTG+AGG 0.672302 3_4:-22986466 Msa0494660:CDS
TTTGACTGGAAGCTTCCCGG+TGG 0.681270 3_4:-22985388 Msa0494660:CDS
CTGGAAGAAGAATATGCCCA+GGG 0.683174 3_4:-22985465 Msa0494660:CDS
GGTAAAGCATGTGAGATACA+TGG 0.686105 3_4:-22985646 Msa0494660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACAATAGTAATTAAGTATT+TGG + chr3_4:22985982-22986001 None:intergenic 15.0%
!! TTAAAAGTTGTAATAGAAAA+TGG + chr3_4:22986247-22986266 None:intergenic 15.0%
!! TACAATAGTAATTAAGTATT+TGG + chr3_4:22985982-22986001 None:intergenic 15.0%
!! TTAAAAGTTGTAATAGAAAA+TGG + chr3_4:22986247-22986266 None:intergenic 15.0%
!! AATATACACAATTGTTTCAA+GGG - chr3_4:22985608-22985627 Msa0494660:CDS 20.0%
!! AATATACACAATTGTTTCAA+GGG - chr3_4:22985608-22985627 Msa0494660:CDS 20.0%
! TTTCTCCTTATGGTAATTAT+TGG - chr3_4:22985430-22985449 Msa0494660:CDS 25.0%
! GAAAAAACATCTTCTCTTAT+TGG + chr3_4:22985519-22985538 None:intergenic 25.0%
! CAATATACACAATTGTTTCA+AGG - chr3_4:22985607-22985626 Msa0494660:CDS 25.0%
!! CCACTGATATAAATTTTTCT+TGG + chr3_4:22985659-22985678 None:intergenic 25.0%
! CCAAGAAAAATTTATATCAG+TGG - chr3_4:22985656-22985675 Msa0494660:CDS 25.0%
! ATTTGTTTCCTTCTTCTAAA+TGG - chr3_4:22985721-22985740 Msa0494660:CDS 25.0%
! ACATCATTGATGAACATAAA+AGG - chr3_4:22985814-22985833 Msa0494660:CDS 25.0%
! CATCATTGATGAACATAAAA+GGG - chr3_4:22985815-22985834 Msa0494660:CDS 25.0%
!! CTTTTGTTAATGAGAAATCT+TGG + chr3_4:22985917-22985936 None:intergenic 25.0%
! ATTAACAAAAGACAATGTCA+AGG - chr3_4:22985926-22985945 Msa0494660:intron 25.0%
! AGTAATTAAGTATTTGGAAG+TGG + chr3_4:22985976-22985995 None:intergenic 25.0%
! AAAATATTTCACAGCTTCTA+AGG + chr3_4:22986076-22986095 None:intergenic 25.0%
!! GTTTTCAAAAACATGAAACA+TGG + chr3_4:22986194-22986213 None:intergenic 25.0%
! TATCAAAAACGTCAAAATAG+AGG - chr3_4:22986291-22986310 Msa0494660:intron 25.0%
! TGTTTAAAGAGATATTCATG+TGG + chr3_4:22986368-22986387 None:intergenic 25.0%
! AATATCTCTTTAAACATCCT+TGG - chr3_4:22986372-22986391 Msa0494660:CDS 25.0%
! TCAAATACCAATTAAGACTA+AGG - chr3_4:22986688-22986707 Msa0494660:CDS 25.0%
! TTTCTCCTTATGGTAATTAT+TGG - chr3_4:22985430-22985449 Msa0494660:CDS 25.0%
! GAAAAAACATCTTCTCTTAT+TGG + chr3_4:22985519-22985538 None:intergenic 25.0%
! CAATATACACAATTGTTTCA+AGG - chr3_4:22985607-22985626 Msa0494660:CDS 25.0%
!! CCACTGATATAAATTTTTCT+TGG + chr3_4:22985659-22985678 None:intergenic 25.0%
! CCAAGAAAAATTTATATCAG+TGG - chr3_4:22985656-22985675 Msa0494660:CDS 25.0%
! ATTTGTTTCCTTCTTCTAAA+TGG - chr3_4:22985721-22985740 Msa0494660:CDS 25.0%
! ACATCATTGATGAACATAAA+AGG - chr3_4:22985814-22985833 Msa0494660:CDS 25.0%
! CATCATTGATGAACATAAAA+GGG - chr3_4:22985815-22985834 Msa0494660:CDS 25.0%
!! CTTTTGTTAATGAGAAATCT+TGG + chr3_4:22985917-22985936 None:intergenic 25.0%
! ATTAACAAAAGACAATGTCA+AGG - chr3_4:22985926-22985945 Msa0494660:intron 25.0%
! AGTAATTAAGTATTTGGAAG+TGG + chr3_4:22985976-22985995 None:intergenic 25.0%
! AAAATATTTCACAGCTTCTA+AGG + chr3_4:22986076-22986095 None:intergenic 25.0%
!! GTTTTCAAAAACATGAAACA+TGG + chr3_4:22986194-22986213 None:intergenic 25.0%
! TATCAAAAACGTCAAAATAG+AGG - chr3_4:22986291-22986310 Msa0494660:intron 25.0%
! TGTTTAAAGAGATATTCATG+TGG + chr3_4:22986368-22986387 None:intergenic 25.0%
! AATATCTCTTTAAACATCCT+TGG - chr3_4:22986372-22986391 Msa0494660:CDS 25.0%
! TCAAATACCAATTAAGACTA+AGG - chr3_4:22986688-22986707 Msa0494660:CDS 25.0%
TGTTGCAAAGTGAATATCAT+GGG + chr3_4:22985355-22985374 None:intergenic 30.0%
TTGTTGCAAAGTGAATATCA+TGG + chr3_4:22985356-22985375 None:intergenic 30.0%
ATGATATTCACTTTGCAACA+AGG - chr3_4:22985355-22985374 Msa0494660:CDS 30.0%
!! AGTATAGCTTTTTCTCCTTA+TGG - chr3_4:22985420-22985439 Msa0494660:CDS 30.0%
TGTCTCCAATAATTACCATA+AGG + chr3_4:22985438-22985457 None:intergenic 30.0%
AAACATCTTCTCTTATTGGT+TGG + chr3_4:22985515-22985534 None:intergenic 30.0%
AAAGAATCAGTAAAGATTGC+AGG - chr3_4:22985681-22985700 Msa0494660:CDS 30.0%
TATTGAAGCCATTTAGAAGA+AGG + chr3_4:22985732-22985751 None:intergenic 30.0%
AAATGGCTTCAATATGTTAC+CGG - chr3_4:22985738-22985757 Msa0494660:CDS 30.0%
GATGTTCTCAAATATCTCAT+CGG + chr3_4:22985799-22985818 None:intergenic 30.0%
AGACGTTCTCTTAAAATATG+AGG - chr3_4:22985881-22985900 Msa0494660:CDS 30.0%
GTTCTCTTAAAATATGAGGA+TGG - chr3_4:22985885-22985904 Msa0494660:intron 30.0%
CATGAAACATGGAAAGTAAA+TGG + chr3_4:22986183-22986202 None:intergenic 30.0%
CTGAAAAGTAGCTATCAATA+AGG + chr3_4:22986408-22986427 None:intergenic 30.0%
!!! CTTATTGATAGCTACTTTTC+AGG - chr3_4:22986406-22986425 Msa0494660:CDS 30.0%
TGTGCTTTCTTCATTATTCT+TGG + chr3_4:22986503-22986522 None:intergenic 30.0%
! AGAGAGGTTTTCAAAATGAA+AGG - chr3_4:22986533-22986552 Msa0494660:CDS 30.0%
! AGGTTTTCAAAATGAAAGGA+AGG - chr3_4:22986537-22986556 Msa0494660:CDS 30.0%
! GGTTTTCAAAATGAAAGGAA+GGG - chr3_4:22986538-22986557 Msa0494660:CDS 30.0%
! ACAACACTATTGACTACAAA+GGG - chr3_4:22986792-22986811 Msa0494660:CDS 30.0%
!! TGTTGTTGTATCATTTTGAC+TGG - chr3_4:22986906-22986925 Msa0494660:CDS 30.0%
! ATCATCTTTTCTTCTCATTG+TGG + chr3_4:22986987-22987006 None:intergenic 30.0%
TTTAAGGGATGGTAAACAAA+AGG + chr3_4:22987022-22987041 None:intergenic 30.0%
TGTTGCAAAGTGAATATCAT+GGG + chr3_4:22985355-22985374 None:intergenic 30.0%
TTGTTGCAAAGTGAATATCA+TGG + chr3_4:22985356-22985375 None:intergenic 30.0%
ATGATATTCACTTTGCAACA+AGG - chr3_4:22985355-22985374 Msa0494660:CDS 30.0%
!! AGTATAGCTTTTTCTCCTTA+TGG - chr3_4:22985420-22985439 Msa0494660:CDS 30.0%
TGTCTCCAATAATTACCATA+AGG + chr3_4:22985438-22985457 None:intergenic 30.0%
AAACATCTTCTCTTATTGGT+TGG + chr3_4:22985515-22985534 None:intergenic 30.0%
AAAGAATCAGTAAAGATTGC+AGG - chr3_4:22985681-22985700 Msa0494660:CDS 30.0%
TATTGAAGCCATTTAGAAGA+AGG + chr3_4:22985732-22985751 None:intergenic 30.0%
AAATGGCTTCAATATGTTAC+CGG - chr3_4:22985738-22985757 Msa0494660:CDS 30.0%
GATGTTCTCAAATATCTCAT+CGG + chr3_4:22985799-22985818 None:intergenic 30.0%
AGACGTTCTCTTAAAATATG+AGG - chr3_4:22985881-22985900 Msa0494660:CDS 30.0%
GTTCTCTTAAAATATGAGGA+TGG - chr3_4:22985885-22985904 Msa0494660:intron 30.0%
CATGAAACATGGAAAGTAAA+TGG + chr3_4:22986183-22986202 None:intergenic 30.0%
CTGAAAAGTAGCTATCAATA+AGG + chr3_4:22986408-22986427 None:intergenic 30.0%
!!! CTTATTGATAGCTACTTTTC+AGG - chr3_4:22986406-22986425 Msa0494660:CDS 30.0%
TGTGCTTTCTTCATTATTCT+TGG + chr3_4:22986503-22986522 None:intergenic 30.0%
! AGAGAGGTTTTCAAAATGAA+AGG - chr3_4:22986533-22986552 Msa0494660:CDS 30.0%
! AGGTTTTCAAAATGAAAGGA+AGG - chr3_4:22986537-22986556 Msa0494660:CDS 30.0%
! GGTTTTCAAAATGAAAGGAA+GGG - chr3_4:22986538-22986557 Msa0494660:CDS 30.0%
! ACAACACTATTGACTACAAA+GGG - chr3_4:22986792-22986811 Msa0494660:CDS 30.0%
!! TGTTGTTGTATCATTTTGAC+TGG - chr3_4:22986906-22986925 Msa0494660:CDS 30.0%
! ATCATCTTTTCTTCTCATTG+TGG + chr3_4:22986987-22987006 None:intergenic 30.0%
TTTAAGGGATGGTAAACAAA+AGG + chr3_4:22987022-22987041 None:intergenic 30.0%
AGCTGATGAAATGACAATAG+TGG + chr3_4:22985307-22985326 None:intergenic 35.0%
ATTTCGATAGCTAGGACTTT+AGG + chr3_4:22985381-22985400 None:intergenic 35.0%
AAGACATGATTTCGATAGCT+AGG + chr3_4:22985389-22985408 None:intergenic 35.0%
AGGAGAAAAAGCTATACTTG+TGG + chr3_4:22985418-22985437 None:intergenic 35.0%
GTTACGTAAAATCTGCACAT+TGG - chr3_4:22985458-22985477 Msa0494660:CDS 35.0%
! TGGAGCTTTTAAGCCTAAAA+AGG - chr3_4:22985478-22985497 Msa0494660:CDS 35.0%
! GGAGCTTTTAAGCCTAAAAA+GGG - chr3_4:22985479-22985498 Msa0494660:CDS 35.0%
!! TTCAATATGTTACCGGTTTG+AGG - chr3_4:22985745-22985764 Msa0494660:CDS 35.0%
CGATGAAACTTCTCAATCTT+AGG + chr3_4:22985771-22985790 None:intergenic 35.0%
GCAAAGAACACAAAAGTCAA+AGG - chr3_4:22985837-22985856 Msa0494660:CDS 35.0%
CAATGTCAAGGCTATAATCT+TGG - chr3_4:22985938-22985957 Msa0494660:intron 35.0%
CATTTACTCTCCATTTCGAA+GGG - chr3_4:22986156-22986175 Msa0494660:intron 35.0%
ATATTCATGTGGCAGTGATA+AGG + chr3_4:22986357-22986376 None:intergenic 35.0%
AATAAGGTCAAGCAAATCCA+AGG + chr3_4:22986392-22986411 None:intergenic 35.0%
!!! GCTACTTTTCAGGACATTTT+CGG - chr3_4:22986416-22986435 Msa0494660:CDS 35.0%
GGCAATGGTAGAAATGATAA+GGG - chr3_4:22986475-22986494 Msa0494660:CDS 35.0%
! AATGAAGAAAGCACAAGATG+AGG - chr3_4:22986508-22986527 Msa0494660:CDS 35.0%
!! ACGACTACCTTAGTCTTAAT+TGG + chr3_4:22986698-22986717 None:intergenic 35.0%
AGTGTTGTCAATGAATCTCT+CGG + chr3_4:22986780-22986799 None:intergenic 35.0%
! GACAACACTATTGACTACAA+AGG - chr3_4:22986791-22986810 Msa0494660:CDS 35.0%
! AACTTCGAGTACATTCCTTT+TGG - chr3_4:22986818-22986837 Msa0494660:CDS 35.0%
ATGATACAACAACATCGCAA+GGG + chr3_4:22986900-22986919 None:intergenic 35.0%
AATGATACAACAACATCGCA+AGG + chr3_4:22986901-22986920 None:intergenic 35.0%
!! TTCTTCACTTTTGATTCCAC+CGG + chr3_4:22986939-22986958 None:intergenic 35.0%
TGGAATCAAAAGTGAAGAAC+TGG - chr3_4:22986940-22986959 Msa0494660:CDS 35.0%
AGCTGATGAAATGACAATAG+TGG + chr3_4:22985307-22985326 None:intergenic 35.0%
ATTTCGATAGCTAGGACTTT+AGG + chr3_4:22985381-22985400 None:intergenic 35.0%
AAGACATGATTTCGATAGCT+AGG + chr3_4:22985389-22985408 None:intergenic 35.0%
AGGAGAAAAAGCTATACTTG+TGG + chr3_4:22985418-22985437 None:intergenic 35.0%
GTTACGTAAAATCTGCACAT+TGG - chr3_4:22985458-22985477 Msa0494660:CDS 35.0%
! TGGAGCTTTTAAGCCTAAAA+AGG - chr3_4:22985478-22985497 Msa0494660:CDS 35.0%
! GGAGCTTTTAAGCCTAAAAA+GGG - chr3_4:22985479-22985498 Msa0494660:CDS 35.0%
!! TTCAATATGTTACCGGTTTG+AGG - chr3_4:22985745-22985764 Msa0494660:CDS 35.0%
CGATGAAACTTCTCAATCTT+AGG + chr3_4:22985771-22985790 None:intergenic 35.0%
GCAAAGAACACAAAAGTCAA+AGG - chr3_4:22985837-22985856 Msa0494660:CDS 35.0%
CAATGTCAAGGCTATAATCT+TGG - chr3_4:22985938-22985957 Msa0494660:intron 35.0%
CATTTACTCTCCATTTCGAA+GGG - chr3_4:22986156-22986175 Msa0494660:intron 35.0%
ATATTCATGTGGCAGTGATA+AGG + chr3_4:22986357-22986376 None:intergenic 35.0%
AATAAGGTCAAGCAAATCCA+AGG + chr3_4:22986392-22986411 None:intergenic 35.0%
!!! GCTACTTTTCAGGACATTTT+CGG - chr3_4:22986416-22986435 Msa0494660:CDS 35.0%
GGCAATGGTAGAAATGATAA+GGG - chr3_4:22986475-22986494 Msa0494660:CDS 35.0%
! AATGAAGAAAGCACAAGATG+AGG - chr3_4:22986508-22986527 Msa0494660:CDS 35.0%
!! ACGACTACCTTAGTCTTAAT+TGG + chr3_4:22986698-22986717 None:intergenic 35.0%
AGTGTTGTCAATGAATCTCT+CGG + chr3_4:22986780-22986799 None:intergenic 35.0%
! GACAACACTATTGACTACAA+AGG - chr3_4:22986791-22986810 Msa0494660:CDS 35.0%
! AACTTCGAGTACATTCCTTT+TGG - chr3_4:22986818-22986837 Msa0494660:CDS 35.0%
ATGATACAACAACATCGCAA+GGG + chr3_4:22986900-22986919 None:intergenic 35.0%
AATGATACAACAACATCGCA+AGG + chr3_4:22986901-22986920 None:intergenic 35.0%
!! TTCTTCACTTTTGATTCCAC+CGG + chr3_4:22986939-22986958 None:intergenic 35.0%
TGGAATCAAAAGTGAAGAAC+TGG - chr3_4:22986940-22986959 Msa0494660:CDS 35.0%
! TTTCATCAGCTGAGTTTGCT+AGG - chr3_4:22985316-22985335 Msa0494660:CDS 40.0%
!! TTCATCAGCTGAGTTTGCTA+GGG - chr3_4:22985317-22985336 Msa0494660:CDS 40.0%
! GGTATGAGTTCACCCTTTTT+AGG + chr3_4:22985494-22985513 None:intergenic 40.0%
AAGTCGATTGCTTCAGAGAA+TGG - chr3_4:22985549-22985568 Msa0494660:CDS 40.0%
! ACAGCTTCAGAGAAGTTGAT+TGG + chr3_4:22985579-22985598 None:intergenic 40.0%
GTCTTTGCATTCTTTGCCAA+AGG + chr3_4:22985637-22985656 None:intergenic 40.0%
GAATCAGTAAAGATTGCAGG+AGG - chr3_4:22985684-22985703 Msa0494660:CDS 40.0%
!!! ATTGCAGGAGGTTTTGACTT+GGG - chr3_4:22985696-22985715 Msa0494660:CDS 40.0%
GAACACAAAAGTCAAAGGTG+AGG - chr3_4:22985842-22985861 Msa0494660:CDS 40.0%
CCTTCGAAATGGAGAGTAAA+TGG + chr3_4:22986158-22986177 None:intergenic 40.0%
CCATTTACTCTCCATTTCGA+AGG - chr3_4:22986155-22986174 Msa0494660:intron 40.0%
AGTAAATGGACCCTTCGAAA+TGG + chr3_4:22986144-22986163 None:intergenic 40.0%
!! ACTTTTCAGGACATTTTCGG+TGG - chr3_4:22986419-22986438 Msa0494660:CDS 40.0%
TTCTACCATTGCCCAATCTA+TGG + chr3_4:22986468-22986487 None:intergenic 40.0%
GGGCAATGGTAGAAATGATA+AGG - chr3_4:22986474-22986493 Msa0494660:CDS 40.0%
CTGTTGTCAAAGAAACCCTT+AGG - chr3_4:22986600-22986619 Msa0494660:CDS 40.0%
CACTGAAGGATGTAACCTAA+GGG + chr3_4:22986618-22986637 None:intergenic 40.0%
! CATTCTCTTGGTAGCAAAAG+AGG + chr3_4:22986641-22986660 None:intergenic 40.0%
! CTTTTGCTACCAAGAGAATG+TGG - chr3_4:22986641-22986660 Msa0494660:CDS 40.0%
CATGCTTTACCACATTCTCT+TGG + chr3_4:22986653-22986672 None:intergenic 40.0%
GGTAAAGCATGTGAGATACA+TGG - chr3_4:22986662-22986681 Msa0494660:CDS 40.0%
TAAGGTAGTCGTCAATGCAT+GGG - chr3_4:22986706-22986725 Msa0494660:CDS 40.0%
TCGCAAGAGATCCAAACTAT+TGG - chr3_4:22986732-22986751 Msa0494660:CDS 40.0%
TCCAAACTATTGGACTGAAC+CGG - chr3_4:22986742-22986761 Msa0494660:CDS 40.0%
GTGTTGTCAATGAATCTCTC+GGG + chr3_4:22986779-22986798 None:intergenic 40.0%
ATTCTTCTTCCAGCACCAAA+AGG + chr3_4:22986836-22986855 None:intergenic 40.0%
!! TCTTCACTTTTGATTCCACC+GGG + chr3_4:22986938-22986957 None:intergenic 40.0%
! TTTCATCAGCTGAGTTTGCT+AGG - chr3_4:22985316-22985335 Msa0494660:CDS 40.0%
!! TTCATCAGCTGAGTTTGCTA+GGG - chr3_4:22985317-22985336 Msa0494660:CDS 40.0%
! GGTATGAGTTCACCCTTTTT+AGG + chr3_4:22985494-22985513 None:intergenic 40.0%
AAGTCGATTGCTTCAGAGAA+TGG - chr3_4:22985549-22985568 Msa0494660:CDS 40.0%
! ACAGCTTCAGAGAAGTTGAT+TGG + chr3_4:22985579-22985598 None:intergenic 40.0%
GTCTTTGCATTCTTTGCCAA+AGG + chr3_4:22985637-22985656 None:intergenic 40.0%
GAATCAGTAAAGATTGCAGG+AGG - chr3_4:22985684-22985703 Msa0494660:CDS 40.0%
!!! ATTGCAGGAGGTTTTGACTT+GGG - chr3_4:22985696-22985715 Msa0494660:CDS 40.0%
GAACACAAAAGTCAAAGGTG+AGG - chr3_4:22985842-22985861 Msa0494660:CDS 40.0%
CCTTCGAAATGGAGAGTAAA+TGG + chr3_4:22986158-22986177 None:intergenic 40.0%
CCATTTACTCTCCATTTCGA+AGG - chr3_4:22986155-22986174 Msa0494660:intron 40.0%
AGTAAATGGACCCTTCGAAA+TGG + chr3_4:22986144-22986163 None:intergenic 40.0%
!! ACTTTTCAGGACATTTTCGG+TGG - chr3_4:22986419-22986438 Msa0494660:CDS 40.0%
TTCTACCATTGCCCAATCTA+TGG + chr3_4:22986468-22986487 None:intergenic 40.0%
GGGCAATGGTAGAAATGATA+AGG - chr3_4:22986474-22986493 Msa0494660:CDS 40.0%
CTGTTGTCAAAGAAACCCTT+AGG - chr3_4:22986600-22986619 Msa0494660:CDS 40.0%
CACTGAAGGATGTAACCTAA+GGG + chr3_4:22986618-22986637 None:intergenic 40.0%
! CATTCTCTTGGTAGCAAAAG+AGG + chr3_4:22986641-22986660 None:intergenic 40.0%
! CTTTTGCTACCAAGAGAATG+TGG - chr3_4:22986641-22986660 Msa0494660:CDS 40.0%
CATGCTTTACCACATTCTCT+TGG + chr3_4:22986653-22986672 None:intergenic 40.0%
GGTAAAGCATGTGAGATACA+TGG - chr3_4:22986662-22986681 Msa0494660:CDS 40.0%
TAAGGTAGTCGTCAATGCAT+GGG - chr3_4:22986706-22986725 Msa0494660:CDS 40.0%
TCGCAAGAGATCCAAACTAT+TGG - chr3_4:22986732-22986751 Msa0494660:CDS 40.0%
TCCAAACTATTGGACTGAAC+CGG - chr3_4:22986742-22986761 Msa0494660:CDS 40.0%
GTGTTGTCAATGAATCTCTC+GGG + chr3_4:22986779-22986798 None:intergenic 40.0%
ATTCTTCTTCCAGCACCAAA+AGG + chr3_4:22986836-22986855 None:intergenic 40.0%
!! TCTTCACTTTTGATTCCACC+GGG + chr3_4:22986938-22986957 None:intergenic 40.0%
ATTGTTTCAAGGGCTGCCTT+TGG - chr3_4:22985618-22985637 Msa0494660:CDS 45.0%
!!! GATTGCAGGAGGTTTTGACT+TGG - chr3_4:22985695-22985714 Msa0494660:CDS 45.0%
CTCAATCTTAGGCCTCAAAC+CGG + chr3_4:22985760-22985779 None:intergenic 45.0%
ATGCTGCCTTGTCTTTCGAA+GGG - chr3_4:22986131-22986150 Msa0494660:intron 45.0%
AATGGACCCTTCGAAAGACA+AGG + chr3_4:22986140-22986159 None:intergenic 45.0%
! TTTCAGGACATTTTCGGTGG+TGG - chr3_4:22986422-22986441 Msa0494660:CDS 45.0%
ATCAGCGAGCACCATAGATT+GGG - chr3_4:22986454-22986473 Msa0494660:CDS 45.0%
GCACTGAAGGATGTAACCTA+AGG + chr3_4:22986619-22986638 None:intergenic 45.0%
CTAAGGTAGTCGTCAATGCA+TGG - chr3_4:22986705-22986724 Msa0494660:CDS 45.0%
TCCGGTTCAGTCCAATAGTT+TGG + chr3_4:22986746-22986765 None:intergenic 45.0%
CTCTCGGGATAAAACTTCTC+CGG + chr3_4:22986764-22986783 None:intergenic 45.0%
!! GAGTACATTCCTTTTGGTGC+TGG - chr3_4:22986824-22986843 Msa0494660:CDS 45.0%
CTGGAAGAAGAATATGCCCA+GGG - chr3_4:22986843-22986862 Msa0494660:CDS 45.0%
CGGTTTGAGAAATGTTGAGC+TGG - chr3_4:22986874-22986893 Msa0494660:CDS 45.0%
!!! CATTTTGACTGGAAGCTTCC+CGG - chr3_4:22986917-22986936 Msa0494660:CDS 45.0%
CTGGACATGACTGAGCAATT+TGG - chr3_4:22986959-22986978 Msa0494660:CDS 45.0%
ATTGTTTCAAGGGCTGCCTT+TGG - chr3_4:22985618-22985637 Msa0494660:CDS 45.0%
!!! GATTGCAGGAGGTTTTGACT+TGG - chr3_4:22985695-22985714 Msa0494660:CDS 45.0%
CTCAATCTTAGGCCTCAAAC+CGG + chr3_4:22985760-22985779 None:intergenic 45.0%
ATGCTGCCTTGTCTTTCGAA+GGG - chr3_4:22986131-22986150 Msa0494660:intron 45.0%
AATGGACCCTTCGAAAGACA+AGG + chr3_4:22986140-22986159 None:intergenic 45.0%
! TTTCAGGACATTTTCGGTGG+TGG - chr3_4:22986422-22986441 Msa0494660:CDS 45.0%
ATCAGCGAGCACCATAGATT+GGG - chr3_4:22986454-22986473 Msa0494660:CDS 45.0%
GCACTGAAGGATGTAACCTA+AGG + chr3_4:22986619-22986638 None:intergenic 45.0%
CTAAGGTAGTCGTCAATGCA+TGG - chr3_4:22986705-22986724 Msa0494660:CDS 45.0%
TCCGGTTCAGTCCAATAGTT+TGG + chr3_4:22986746-22986765 None:intergenic 45.0%
CTCTCGGGATAAAACTTCTC+CGG + chr3_4:22986764-22986783 None:intergenic 45.0%
!! GAGTACATTCCTTTTGGTGC+TGG - chr3_4:22986824-22986843 Msa0494660:CDS 45.0%
CTGGAAGAAGAATATGCCCA+GGG - chr3_4:22986843-22986862 Msa0494660:CDS 45.0%
CGGTTTGAGAAATGTTGAGC+TGG - chr3_4:22986874-22986893 Msa0494660:CDS 45.0%
!!! CATTTTGACTGGAAGCTTCC+CGG - chr3_4:22986917-22986936 Msa0494660:CDS 45.0%
CTGGACATGACTGAGCAATT+TGG - chr3_4:22986959-22986978 Msa0494660:CDS 45.0%
!! TATATTATATTATATAGTAA+TGG - chr3_4:22986108-22986127 Msa0494660:intron 5.0%
!! TATATTATATTATATAGTAA+TGG - chr3_4:22986108-22986127 Msa0494660:intron 5.0%
!! ATCAGCTGAGTTTGCTAGGG+AGG - chr3_4:22985320-22985339 Msa0494660:CDS 50.0%
AGGTGAGGTAGCAGAAGATC+TGG - chr3_4:22985857-22985876 Msa0494660:CDS 50.0%
GATGCTGCCTTGTCTTTCGA+AGG - chr3_4:22986130-22986149 Msa0494660:intron 50.0%
CATCAGCGAGCACCATAGAT+TGG - chr3_4:22986453-22986472 Msa0494660:CDS 50.0%
GAGCACCATAGATTGGGCAA+TGG - chr3_4:22986460-22986479 Msa0494660:CDS 50.0%
AGCACAAGATGAGGTGAGAG+AGG - chr3_4:22986517-22986536 Msa0494660:CDS 50.0%
!! GGTAGCAAAAGAGGCACTGA+AGG + chr3_4:22986632-22986651 None:intergenic 50.0%
GCTGGAAGAAGAATATGCCC+AGG - chr3_4:22986842-22986861 Msa0494660:CDS 50.0%
! ATATGCCCAGGGAGCACATT+CGG - chr3_4:22986854-22986873 Msa0494660:CDS 50.0%
TCAAACCGAATGTGCTCCCT+GGG + chr3_4:22986862-22986881 None:intergenic 50.0%
!! ATCAGCTGAGTTTGCTAGGG+AGG - chr3_4:22985320-22985339 Msa0494660:CDS 50.0%
AGGTGAGGTAGCAGAAGATC+TGG - chr3_4:22985857-22985876 Msa0494660:CDS 50.0%
GATGCTGCCTTGTCTTTCGA+AGG - chr3_4:22986130-22986149 Msa0494660:intron 50.0%
CATCAGCGAGCACCATAGAT+TGG - chr3_4:22986453-22986472 Msa0494660:CDS 50.0%
GAGCACCATAGATTGGGCAA+TGG - chr3_4:22986460-22986479 Msa0494660:CDS 50.0%
AGCACAAGATGAGGTGAGAG+AGG - chr3_4:22986517-22986536 Msa0494660:CDS 50.0%
!! GGTAGCAAAAGAGGCACTGA+AGG + chr3_4:22986632-22986651 None:intergenic 50.0%
GCTGGAAGAAGAATATGCCC+AGG - chr3_4:22986842-22986861 Msa0494660:CDS 50.0%
! ATATGCCCAGGGAGCACATT+CGG - chr3_4:22986854-22986873 Msa0494660:CDS 50.0%
TCAAACCGAATGTGCTCCCT+GGG + chr3_4:22986862-22986881 None:intergenic 50.0%
!! CAGGACATTTTCGGTGGTGG+AGG - chr3_4:22986425-22986444 Msa0494660:CDS 55.0%
CTCAAACCGAATGTGCTCCC+TGG + chr3_4:22986863-22986882 None:intergenic 55.0%
TTTGACTGGAAGCTTCCCGG+TGG - chr3_4:22986920-22986939 Msa0494660:CDS 55.0%
!! CAGGACATTTTCGGTGGTGG+AGG - chr3_4:22986425-22986444 Msa0494660:CDS 55.0%
CTCAAACCGAATGTGCTCCC+TGG + chr3_4:22986863-22986882 None:intergenic 55.0%
TTTGACTGGAAGCTTCCCGG+TGG - chr3_4:22986920-22986939 Msa0494660:CDS 55.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 22985279 22987051 22985279 ID=Msa0494660;Name=Msa0494660
chr3_4 mRNA 22985279 22987051 22985279 ID=Msa0494660-mRNA-1;Parent=Msa0494660;Name=Msa0494660-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|0|0|1|1|1|2|0|434
chr3_4 exon 22986371 22987051 22986371 ID=Msa0494660-mRNA-1:exon:5705;Parent=Msa0494660-mRNA-1
chr3_4 exon 22985279 22985902 22985279 ID=Msa0494660-mRNA-1:exon:5704;Parent=Msa0494660-mRNA-1
chr3_4 CDS 22986371 22987051 22986371 ID=Msa0494660-mRNA-1:cds;Parent=Msa0494660-mRNA-1
chr3_4 CDS 22985279 22985902 22985279 ID=Msa0494660-mRNA-1:cds;Parent=Msa0494660-mRNA-1
Gene Sequence

>Msa0494660

ATGCATCTTCAACTTGGAGAGGTTTCCACTATTGTCATTTCATCAGCTGAGTTTGCTAGGGAGGTTATGAAAACCCATGATATTCACTTTGCAACAAGGCCTAAAGTCCTAGCTATCGAAATCATGTCTTACAATTCCACAAGTATAGCTTTTTCTCCTTATGGTAATTATTGGAGACAGTTACGTAAAATCTGCACATTGGAGCTTTTAAGCCTAAAAAGGGTGAACTCATACCAACCAATAAGAGAAGATGTTTTTTCGAATCTTATCAAGTCGATTGCTTCAGAGAATGGATCGCCAATCAACTTCTCTGAAGCTGTACTTTCTTCAATATACACAATTGTTTCAAGGGCTGCCTTTGGCAAAGAATGCAAAGACCAAGAAAAATTTATATCAGTGGTAAAAGAATCAGTAAAGATTGCAGGAGGTTTTGACTTGGGAGATTTGTTTCCTTCTTCTAAATGGCTTCAATATGTTACCGGTTTGAGGCCTAAGATTGAGAAGTTTCATCGACAAACCGATGAGATATTTGAGAACATCATTGATGAACATAAAAGGGCAAAGAACACAAAAGTCAAAGGTGAGGTAGCAGAAGATCTGGTAGACGTTCTCTTAAAATATGAGGATGGTAGCAACCAAGATTTCTCATTAACAAAAGACAATGTCAAGGCTATAATCTTGGACATTTTCGGTGGTGGAGGTGAGACATCAGCGAGCACCATAGATTGGGCAATGGTAGAAATGATAAGGGATCCAAGAATAATGAAGAAAGCACAAGATGAGGTGAGAGAGGTTTTCAAAATGAAAGGAAGGGTTGATGAAAATTACATCAATGAACTCAATTATTTGAAATCTGTTGTCAAAGAAACCCTTAGGTTACATCCTTCAGTGCCTCTTTTGCTACCAAGAGAATGTGGTAAAGCATGTGAGATACATGGTTATCAAATACCAATTAAGACTAAGGTAGTCGTCAATGCATGGGCAATCGCAAGAGATCCAAACTATTGGACTGAACCGGAGAAGTTTTATCCCGAGAGATTCATTGACAACACTATTGACTACAAAGGGAGTAACTTCGAGTACATTCCTTTTGGTGCTGGAAGAAGAATATGCCCAGGGAGCACATTCGGTTTGAGAAATGTTGAGCTGGCCCTTGCGATGTTGTTGTATCATTTTGACTGGAAGCTTCCCGGTGGAATCAAAAGTGAAGAACTGGACATGACTGAGCAATTTGGAGCCACAATGAGAAGAAAAGATGATCTTTTACTGTTGCCTTTTGTTTACCATCCCTTAAATGTCGCATGA
Protein sequence

>Msa0494660

MHLQLGEVSTIVISSAEFAREVMKTHDIHFATRPKVLAIEIMSYNSTSIAFSPYGNYWRQLRKICTLELLSLKRVNSYQPIREDVFSNLIKSIASENGSPINFSEAVLSSIYTIVSRAAFGKECKDQEKFISVVKESVKIAGGFDLGDLFPSSKWLQYVTGLRPKIEKFHRQTDEIFENIIDEHKRAKNTKVKGEVAEDLVDVLLKYEDGSNQDFSLTKDNVKAIILDIFGGGGETSASTIDWAMVEMIRDPRIMKKAQDEVREVFKMKGRVDENYINELNYLKSVVKETLRLHPSVPLLLPRECGKACEIHGYQIPIKTKVVVNAWAIARDPNYWTEPEKFYPERFIDNTIDYKGSNFEYIPFGAGRRICPGSTFGLRNVELALAMLLYHFDWKLPGGIKSEELDMTEQFGATMRRKDDLLLLPFVYHPLNVA*