AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0495730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0495730 MtrunA17_Chr6g0472201 91.587 416 33 1 277 690 1 416 0.0 764
Msa0495730 MtrunA17_Chr3g0096851 93.657 268 15 1 277 542 1 268 1.17e-175 501
Msa0495730 MtrunA17_Chr4g0011741 51.111 450 195 6 239 676 478 914 6.23e-148 455
Msa0495730 MtrunA17_Chr6g0472181 88.477 243 28 0 1 243 1 243 1.39e-146 426
Msa0495730 MtrunA17_Chr7g0226581 55.224 201 88 2 465 665 1 199 1.58e-66 220
Msa0495730 MtrunA17_Chr5g0409781 60.448 134 48 1 372 505 47 175 1.43e-53 182
Msa0495730 MtrunA17_Chr2g0305341 69.725 109 29 2 582 687 81 188 1.98e-37 139
Msa0495730 MtrunA17_Chr2g0306531 41.111 180 100 3 491 669 2 176 6.18e-35 132
Msa0495730 MtrunA17_Chr2g0306521 45.361 97 49 1 325 421 238 330 7.49e-24 103
Msa0495730 MtrunA17_Chr2g0305311 24.242 297 212 7 353 647 182 467 3.14e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0495730 AT1G40087.1 26.513 347 189 18 335 658 67 370 1.87e-16 82.4
Msa0495730 AT3G30200.1 25.094 267 182 8 354 610 193 451 2.01e-14 77.0

Find 161 sgRNAs with CRISPR-Local

Find 720 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGACTTAATTGAGAAATA+TGG 0.166736 3_4:+25334072 Msa0495730:CDS
GTCCTCTCACCTTCAATAAT+TGG 0.187095 3_4:+25332960 Msa0495730:CDS
AGAACTCACAATTGCAATAT+TGG 0.211502 3_4:-25333687 None:intergenic
ACCTTTGGAAATCAAGTTAA+AGG 0.217189 3_4:+25332196 Msa0495730:CDS
TCTTCTTCCGGTACCTCTTC+TGG 0.218858 3_4:-25333266 None:intergenic
CTTCTCTCCGATGCCAATTT+AGG 0.223085 3_4:-25335029 None:intergenic
ATTGTCCTGCCTTAACTCTT+TGG 0.234291 3_4:-25332371 None:intergenic
CTAAAGTAGCCCACCTAAAT+TGG 0.243951 3_4:+25335016 Msa0495730:three_prime_UTR
GATTTCAGTGGGTGAGTTAG+AGG 0.249039 3_4:-25323251 None:intergenic
ACATTCTTCTTTCCTTTCTC+TGG 0.274116 3_4:-25333143 None:intergenic
AGTGCCAAAGCGGGACATTT+TGG 0.276462 3_4:-25332484 None:intergenic
CGATGAAGAATTTGAAGATT+TGG 0.285144 3_4:+25334823 Msa0495730:CDS
AGAAGACTTTAAGAAGTTAT+TGG 0.285807 3_4:+25333283 Msa0495730:CDS
TGAGTTAGAGGATTCGATTC+AGG 0.300596 3_4:-25323239 None:intergenic
TTGAGACTGAAAGTTGATTC+AGG 0.306642 3_4:-25323354 None:intergenic
TGATGAGGTAAAACAATTAA+AGG 0.308237 3_4:+25334230 Msa0495730:CDS
ACTCAATAGGTTTCATTTGT+TGG 0.311663 3_4:-25331943 None:intergenic
TTCAAGACCTGTTCAAATTT+AGG 0.319982 3_4:+25324616 Msa0495730:five_prime_UTR
CTCCACCTTCTCTTCTAATC+AGG 0.321617 3_4:+25327707 Msa0495730:five_prime_UTR
TATATCAAAATATATTGTTT+TGG 0.322764 3_4:-25334965 None:intergenic
CTCAATAGGTTTCATTTGTT+GGG 0.326930 3_4:-25331942 None:intergenic
AGTAGTCATGTAAACATTAT+TGG 0.329001 3_4:+25331803 Msa0495730:CDS
GGCATGACACTACTCTTAAA+AGG 0.329849 3_4:+25332161 Msa0495730:CDS
CTTCAATAATTGGAAGGCTT+TGG 0.347668 3_4:+25332970 Msa0495730:CDS
TTAAGAAGTTATTGGTGTAT+TGG 0.348981 3_4:+25333291 Msa0495730:CDS
AAATGAAATGGAAGATGATA+TGG 0.358076 3_4:+25332576 Msa0495730:CDS
CATTTCTCTTTAAGAGAGTC+GGG 0.359348 3_4:-25334176 None:intergenic
AATGAACATTTCCGCTTGAC+TGG 0.362015 3_4:-25333621 None:intergenic
CTAATCAGGGCATTTGTTGT+TGG 0.364615 3_4:+25327721 Msa0495730:five_prime_UTR
AAAATATTGCTCAACTGAAA+TGG 0.376410 3_4:+25333438 Msa0495730:CDS
AAGACTTAATTGAGAAATAT+GGG 0.383270 3_4:+25334073 Msa0495730:CDS
GATTTCAGTGAGTGAGTAAG+AGG 0.385283 3_4:-25323304 None:intergenic
GAAGGCTTTGGTTAAGTCTT+GGG 0.388773 3_4:+25332982 Msa0495730:CDS
ATGAAGAAATAGATCCAGTC+TGG 0.394914 3_4:+25333008 Msa0495730:CDS
CTTCCGCAATAATTCATTGC+TGG 0.395820 3_4:-25331738 None:intergenic
CAGAGGTATTAAGAGGCAAT+TGG 0.405738 3_4:+25331985 Msa0495730:CDS
TGGGTTGGATACAGAGGCTT+TGG 0.406186 3_4:+25334353 Msa0495730:CDS
GAGAAGGTGGAGTTGATGTA+TGG 0.408663 3_4:-25327696 None:intergenic
CATTCTTCTTTCCTTTCTCT+GGG 0.415952 3_4:-25333142 None:intergenic
AACCCTTTGTCCGACTCAAT+AGG 0.424932 3_4:-25331956 None:intergenic
AATCTTACCTCATTATCATC+TGG 0.427343 3_4:-25334444 None:intergenic
TTTCTTTGAGGCATGTGATT+CGG 0.427534 3_4:-25332335 None:intergenic
AACTTCTTAAAGTCTTCTTC+CGG 0.432752 3_4:-25333278 None:intergenic
CAAAGCCTTCCAATTATTGA+AGG 0.433468 3_4:-25332969 None:intergenic
TCATTTCTCTTTAAGAGAGT+CGG 0.435098 3_4:-25334177 None:intergenic
TTTCTCATCAAATTTCTTTG+AGG 0.436085 3_4:-25332236 None:intergenic
GGAAGGCTTTGGTTAAGTCT+TGG 0.437060 3_4:+25332981 Msa0495730:CDS
TTCAGGATTCTGAGAGATTG+AGG 0.443115 3_4:-25323222 None:intergenic
AGGAAAATGAAGACGGGTAA+TGG 0.447905 3_4:+25331689 Msa0495730:intron
AGGCAAGGAAAATCAACCTT+TGG 0.451576 3_4:+25332181 Msa0495730:CDS
GCCGATGAAAATGAAGTTGA+AGG 0.462705 3_4:+25332637 Msa0495730:CDS
TTGCTATTGTAAATGATGCT+TGG 0.464921 3_4:+25333168 Msa0495730:CDS
TATTCCAAAATGTCCCGCTT+TGG 0.465965 3_4:+25332480 Msa0495730:CDS
GATTTCTATCGACAATATTG+AGG 0.471416 3_4:-25323161 None:intergenic
CTACCGTTGATCCTTGAACT+TGG 0.472187 3_4:-25332429 None:intergenic
AAATTGTTGAGCAGAGGAAA+GGG 0.474900 3_4:+25332026 Msa0495730:CDS
CTCTCCGATGCCAATTTAGG+TGG 0.476677 3_4:-25335026 None:intergenic
TTGTTCACAGAGGTATTAAG+AGG 0.478774 3_4:+25331978 Msa0495730:CDS
ATGAGCAAACCAAAGAGTTA+AGG 0.480249 3_4:+25332362 Msa0495730:CDS
AAAATTGTTGAGCAGAGGAA+AGG 0.480598 3_4:+25332025 Msa0495730:CDS
AGAATCGCCTAAATTTGAAC+AGG 0.481035 3_4:-25324623 None:intergenic
GTTCGATTAAGAGTTTCAAT+TGG 0.490237 3_4:-25323281 None:intergenic
ATTTCTGTGCGGTGAGGTTG+AGG 0.496870 3_4:-25323188 None:intergenic
AACATTGAACTTGATTTCCA+AGG 0.502360 3_4:-25332309 None:intergenic
CTTTGAAAGGCTTCTTCAGA+AGG 0.503056 3_4:-25334099 None:intergenic
ACCTTTAACTTGATTTCCAA+AGG 0.511277 3_4:-25332197 None:intergenic
TTGCCGATGGCTGCTTATGA+TGG 0.512365 3_4:-25331847 None:intergenic
AAATACATCATCCCAGAGAA+AGG 0.512629 3_4:+25333131 Msa0495730:CDS
GGCAGGACAATACTCTTATG+AGG 0.518384 3_4:+25332383 Msa0495730:CDS
TCAGGATTCTGAGAGATTGA+GGG 0.520819 3_4:-25323221 None:intergenic
GCTACACGTCAAAGTAAGAA+AGG 0.523703 3_4:+25333644 Msa0495730:CDS
ACCACGGGAAACCAAGTTCA+AGG 0.526461 3_4:+25332418 Msa0495730:CDS
GAGATCACGTTGAATGAAGA+AGG 0.526652 3_4:+25332857 Msa0495730:CDS
TTGCACATCAAAATTCTTCG+AGG 0.529043 3_4:-25332125 None:intergenic
CTGAAATGGAGACATCGAAC+GGG 0.529556 3_4:+25333452 Msa0495730:CDS
AAAGGATCATATACAAGAGA+TGG 0.530057 3_4:+25334248 Msa0495730:CDS
ACCGTGGATCATCAAGTTGA+AGG 0.533855 3_4:+25332085 Msa0495730:CDS
ACATTGAACTTGATTTCCAA+GGG 0.535822 3_4:-25332308 None:intergenic
AAGTAAGAAAGGAAAAGAGC+TGG 0.540072 3_4:+25333655 Msa0495730:CDS
CCGTGGCAACGAAGTCTCCC+AGG 0.541534 3_4:-25334141 None:intergenic
ATGAACATTTCCGCTTGACT+GGG 0.542212 3_4:-25333620 None:intergenic
TATTGGTGGAAACATTCAAA+AGG 0.542352 3_4:+25331820 Msa0495730:CDS
GGCAGGACAATACTCTTAAG+AGG 0.548242 3_4:+25332272 Msa0495730:CDS
AACCTATTGAGTCGGACAAA+GGG 0.551902 3_4:+25331954 Msa0495730:CDS
TTTGCCGCATACACTTTGAA+AGG 0.552243 3_4:-25334112 None:intergenic
TACTCATCAAGTGCCAAAGC+GGG 0.553546 3_4:-25332493 None:intergenic
AAATCGTCCAGAAGAGGTAC+CGG 0.554031 3_4:+25333259 Msa0495730:CDS
AGTCATGTAAACATTATTGG+TGG 0.554083 3_4:+25331806 Msa0495730:CDS
TTGAGATTTAAGTGAGGTGA+GGG 0.554404 3_4:-25323394 None:intergenic
TATTCAATGACTGCTTCAGT+TGG 0.556326 3_4:-25331907 None:intergenic
TGAGTATATTGAAATGAGGA+AGG 0.556440 3_4:+25332510 Msa0495730:CDS
AATGAAGAAGGACAACCGAT+TGG 0.564096 3_4:+25332869 Msa0495730:CDS
ACCTTCAACTTGATGATCCA+CGG 0.564624 3_4:-25332086 None:intergenic
AGGCAAGGAAAATCAACCCT+TGG 0.565304 3_4:+25332292 Msa0495730:CDS
ATCACATTTCTAATTGCCGA+TGG 0.566573 3_4:-25331860 None:intergenic
ACATTGTTAGCATCAGCTGC+AGG 0.567690 3_4:-25334393 None:intergenic
AAACCTATTGAGTCGGACAA+AGG 0.572113 3_4:+25331953 Msa0495730:CDS
GGCTTTGGTTAAGTCTTGGG+AGG 0.572814 3_4:+25332985 Msa0495730:CDS
GCGTAAGGAAACAGAAGCAA+TGG 0.575241 3_4:+25334281 Msa0495730:CDS
ATGTGCAACACAAAGAGGTA+AGG 0.576701 3_4:+25332140 Msa0495730:CDS
AGAGAAAGTACTCTTCAAGA+AGG 0.578717 3_4:+25327747 Msa0495730:five_prime_UTR
ATTGAGATTTAAGTGAGGTG+AGG 0.578773 3_4:-25323395 None:intergenic
TCTCACCTTCAATAATTGGA+AGG 0.581707 3_4:+25332964 Msa0495730:CDS
ACATTGACATATTCCCAGAC+TGG 0.583046 3_4:-25333022 None:intergenic
TCAGGATTCTGAGAGAATGA+AGG 0.583131 3_4:-25323336 None:intergenic
TCTCCGATGCCAATTTAGGT+GGG 0.585002 3_4:-25335025 None:intergenic
ATATTGAGTCAAAACACCAC+TGG 0.587784 3_4:+25334333 Msa0495730:CDS
ATTTGCTCCAGATGATAATG+AGG 0.590428 3_4:+25334437 Msa0495730:CDS
AACATTTCCGCTTGACTGGG+AGG 0.593083 3_4:-25333617 None:intergenic
TTGATGAGTATATTGAAATG+AGG 0.593158 3_4:+25332506 Msa0495730:CDS
TCCACCTTCTCTTCTAATCA+GGG 0.593538 3_4:+25327708 Msa0495730:five_prime_UTR
TTCCAATTATTGAAGGTGAG+AGG 0.598752 3_4:-25332962 None:intergenic
TAGCCCACCTAAATTGGCAT+CGG 0.602557 3_4:+25335022 Msa0495730:three_prime_UTR
GACACTACTCTTAAAAGGCA+AGG 0.605650 3_4:+25332166 Msa0495730:CDS
TAAGAAATTGAAGTCTACCG+TGG 0.605754 3_4:+25332069 Msa0495730:CDS
TCGGGGTTGTAGTTCTTCCG+TGG 0.606027 3_4:-25334158 None:intergenic
TTGGTCTGAGAGATTTCAGT+GGG 0.606720 3_4:-25323262 None:intergenic
GACAATACTCTTAAGAGGCA+AGG 0.607230 3_4:+25332277 Msa0495730:CDS
AATGCCCTGATTAGAAGAGA+AGG 0.608679 3_4:-25327712 None:intergenic
CTAAGAAAATTGTTGAGCAG+AGG 0.609530 3_4:+25332020 Msa0495730:CDS
CCTGGGAGACTTCGTTGCCA+CGG 0.610149 3_4:+25334141 Msa0495730:CDS
TGAAGAAATAGATCCAGTCT+GGG 0.610523 3_4:+25333009 Msa0495730:CDS
GAACAACATGGCATAGAGGA+AGG 0.613662 3_4:+25332532 Msa0495730:CDS
GAAGGAACAACATGGCATAG+AGG 0.613733 3_4:+25332528 Msa0495730:CDS
AATTGCAGGAAAATGAAGAC+GGG 0.613917 3_4:+25331683 Msa0495730:intron
GACAATACTCTTATGAGGCA+AGG 0.614050 3_4:+25332388 Msa0495730:CDS
CACTTAAATCTCAATCGAAG+AGG 0.614121 3_4:+25323403 Msa0495730:five_prime_UTR
TAAAGAGCCTCCCAGTCAAG+CGG 0.616114 3_4:+25333610 Msa0495730:CDS
ATTTCTCTTTAAGAGAGTCG+GGG 0.616502 3_4:-25334175 None:intergenic
AGGCAAGGAAAATCAACCAC+GGG 0.616835 3_4:+25332403 Msa0495730:CDS
CACCACTGGGTTGGATACAG+AGG 0.617053 3_4:+25334347 Msa0495730:CDS
GGATCATATACAAGAGATGG+AGG 0.620769 3_4:+25334251 Msa0495730:CDS
GATGGAGGAGAAACAGCGTA+AGG 0.621712 3_4:+25334266 Msa0495730:CDS
ACAAATGAAACCTATTGAGT+CGG 0.623516 3_4:+25331946 Msa0495730:CDS
GAGTCAAAACACCACTGGGT+TGG 0.624398 3_4:+25334338 Msa0495730:CDS
GCAAACCAAAGAGTTAAGGC+AGG 0.624994 3_4:+25332366 Msa0495730:CDS
ATTTCAGTGAGTGAGTAAGA+GGG 0.628515 3_4:-25323303 None:intergenic
TAATTGCAGGAAAATGAAGA+CGG 0.631602 3_4:+25331682 Msa0495730:intron
TAGAAGAGAACATAATGATG+AGG 0.633904 3_4:+25334215 Msa0495730:CDS
AAACCAAGTTCAAGGATCAA+CGG 0.636666 3_4:+25332426 Msa0495730:CDS
AGACCATCATAAGCAGCCAT+CGG 0.637547 3_4:+25331844 Msa0495730:CDS
TATTGAGTCAAAACACCACT+GGG 0.638583 3_4:+25334334 Msa0495730:CDS
GCCCTGATTAGAAGAGAAGG+TGG 0.639400 3_4:-25327709 None:intergenic
AAGGAAACAGAAGCAATGGA+AGG 0.641594 3_4:+25334285 Msa0495730:CDS
TCCTTGAACTTGGTTTCCCG+TGG 0.645037 3_4:-25332419 None:intergenic
AGTACAAAACCATGCGCGAG+CGG 0.650792 3_4:+25333231 Msa0495730:CDS
TGGACCAGATGAAAAGAGAG+TGG 0.653315 3_4:+25332889 Msa0495730:CDS
GAAGCCTTTCAAAGTGTATG+CGG 0.655257 3_4:+25334108 Msa0495730:CDS
CTTCGATTGAGATTTAAGTG+AGG 0.658914 3_4:-25323400 None:intergenic
ACTGAAATGGAGACATCGAA+CGG 0.675587 3_4:+25333451 Msa0495730:CDS
AGTCCAGCAATGAATTATTG+CGG 0.676190 3_4:+25331735 Msa0495730:CDS
CAACATGGCATAGAGGAAGG+AGG 0.681113 3_4:+25332535 Msa0495730:CDS
ATTGAGATTTCTGTGCGGTG+AGG 0.686231 3_4:-25323194 None:intergenic
GAGGCAAGGAAAATCAACCA+CGG 0.692235 3_4:+25332402 Msa0495730:CDS
ATTGGTCTGAGAGATTTCAG+TGG 0.694018 3_4:-25323263 None:intergenic
ATACTCATCAAGTGCCAAAG+CGG 0.701234 3_4:-25332494 None:intergenic
AGCCTCTGTATCCAACCCAG+TGG 0.709335 3_4:-25334349 None:intergenic
GACAAAGGGTTTGTTCACAG+AGG 0.724921 3_4:+25331968 Msa0495730:CDS
GAAATGAGGAAGGAACAACA+TGG 0.746093 3_4:+25332520 Msa0495730:CDS
GCAGGATTAATAAGAAAACG+AGG 0.758121 3_4:+25332785 Msa0495730:intron
GTTCGATTGAGATTTCTGTG+CGG 0.759963 3_4:-25323199 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTTCAAACAAAAAATTA+AGG + chr3_4:25324269-25324288 Msa0495730:intron 10.0%
!! ATATGAACTAAATATAATTA+AGG - chr3_4:25324763-25324782 None:intergenic 10.0%
!!! ATATATTTTTTTACTACAAA+TGG + chr3_4:25325322-25325341 Msa0495730:intron 10.0%
!!! TATATTTTTTTACTACAAAT+GGG + chr3_4:25325323-25325342 Msa0495730:intron 10.0%
!! TAAATGAATAAATAATAACA+AGG - chr3_4:25325486-25325505 None:intergenic 10.0%
!!! TATTCATTTAAAATTGAATT+TGG + chr3_4:25325496-25325515 Msa0495730:intron 10.0%
!! ATTAAATCATATATTACAAA+AGG - chr3_4:25326245-25326264 None:intergenic 10.0%
!!! ATAAAATTTTATTCATATGT+TGG - chr3_4:25331542-25331561 None:intergenic 10.0%
!!! TATATCAAAATATATTGTTT+TGG - chr3_4:25334968-25334987 None:intergenic 10.0%
!!! TTTTGTTATTTCATTAGATT+TGG + chr3_4:25323433-25323452 Msa0495730:intron 15.0%
!!! TTTGTTATTTCATTAGATTT+GGG + chr3_4:25323434-25323453 Msa0495730:intron 15.0%
!!! TTTAAAGTTGAGAAATTTTT+TGG + chr3_4:25324649-25324668 Msa0495730:five_prime_UTR 15.0%
!!! TCATTTTATTCTAATGTTAA+TGG + chr3_4:25324708-25324727 Msa0495730:intron 15.0%
!!! TAATTCTTTTAAGATTGTTT+GGG + chr3_4:25324905-25324924 Msa0495730:intron 15.0%
!! AAAAAAGATAATATTCCATA+TGG + chr3_4:25325241-25325260 Msa0495730:intron 15.0%
!! AAAAAGATAATATTCCATAT+GGG + chr3_4:25325242-25325261 Msa0495730:intron 15.0%
!! ATTGTTTACAAAAAAAGTAA+AGG - chr3_4:25326396-25326415 None:intergenic 15.0%
!! TAAAATCATATAAAACCATT+CGG - chr3_4:25326883-25326902 None:intergenic 15.0%
!!! CATTCTTTTTAATGATTAAT+AGG + chr3_4:25327537-25327556 Msa0495730:intron 15.0%
!! TGATTATCATTAATATCATT+GGG - chr3_4:25328318-25328337 None:intergenic 15.0%
!! ATGATTATCATTAATATCAT+TGG - chr3_4:25328319-25328338 None:intergenic 15.0%
!!! AACATATTTGATAGTATAAT+TGG + chr3_4:25329709-25329728 Msa0495730:intron 15.0%
!!! ACATATTTGATAGTATAATT+GGG + chr3_4:25329710-25329729 Msa0495730:intron 15.0%
!!! GTTTTAATATGTATTTGTTA+TGG + chr3_4:25331451-25331470 Msa0495730:intron 15.0%
!! TGTTATTAATACATTACAAA+TGG + chr3_4:25331514-25331533 Msa0495730:intron 15.0%
!!! AATATATTTTTTGTTCTTAC+AGG - chr3_4:25332464-25332483 None:intergenic 15.0%
!! AGATATAGAAAAAAATGAAA+TGG + chr3_4:25332564-25332583 Msa0495730:CDS 15.0%
!! AATTTGAAGAAAAATAATGA+TGG + chr3_4:25334633-25334652 Msa0495730:intron 15.0%
!! AATTGCAAAAACAAAAATCA+AGG - chr3_4:25323482-25323501 None:intergenic 20.0%
!!! TTTTGATATGTGGTATAATT+AGG + chr3_4:25323737-25323756 Msa0495730:intron 20.0%
!! AGTTATCTTATTCTAATCAA+TGG - chr3_4:25323976-25323995 None:intergenic 20.0%
!! TTAGAATAAGATAACTATCA+TGG + chr3_4:25323980-25323999 Msa0495730:intron 20.0%
!! AATGACATCATACTTAAAAA+CGG - chr3_4:25324018-25324037 None:intergenic 20.0%
!!! TTTTTATGATGGAATTGTAT+GGG - chr3_4:25324301-25324320 None:intergenic 20.0%
!! TTACACTTCAGAAATAATAT+GGG - chr3_4:25324340-25324359 None:intergenic 20.0%
!! TTTACACTTCAGAAATAATA+TGG - chr3_4:25324341-25324360 None:intergenic 20.0%
!! AGTAGATAGTATATTCAATA+TGG + chr3_4:25324373-25324392 Msa0495730:intron 20.0%
!! ACAAAAATAAGTATTTGAAC+AGG - chr3_4:25324555-25324574 None:intergenic 20.0%
!! TTATTTCATCATATTCCATA+TGG + chr3_4:25324791-25324810 Msa0495730:intron 20.0%
!!! AAGAAATTAAAGTGTTATCT+TGG + chr3_4:25324817-25324836 Msa0495730:intron 20.0%
!! ATAATTCTATGAAAGTTGTT+GGG + chr3_4:25324875-25324894 Msa0495730:intron 20.0%
!!! GTAATTCTTTTAAGATTGTT+TGG + chr3_4:25324904-25324923 Msa0495730:intron 20.0%
!!! ATTATCTTTTTTAATCAACG+AGG - chr3_4:25325233-25325252 None:intergenic 20.0%
!! AGTTAACTGAATAGAAATTT+AGG + chr3_4:25325279-25325298 Msa0495730:intron 20.0%
!!! TCATTTAAAATTGAATTTGG+TGG + chr3_4:25325499-25325518 Msa0495730:intron 20.0%
!! TACGTAAATTAACTTCAAAT+TGG - chr3_4:25325682-25325701 None:intergenic 20.0%
!! ACAAGAATTTATTTAGATGT+TGG - chr3_4:25325866-25325885 None:intergenic 20.0%
!! AGAAATGAGATTTAGTTAAA+AGG + chr3_4:25325961-25325980 Msa0495730:intron 20.0%
!! GAAATGAGATTTAGTTAAAA+GGG + chr3_4:25325962-25325981 Msa0495730:intron 20.0%
!! TAATCACATACAAAAGTAAA+AGG - chr3_4:25326185-25326204 None:intergenic 20.0%
!!! TTACTTTTGTATGTGATTAA+TGG + chr3_4:25326186-25326205 Msa0495730:intron 20.0%
!! TAATAGAAATTTGAACTAGT+AGG - chr3_4:25326276-25326295 None:intergenic 20.0%
!!! TTGTAAACAATCTAGTTTAT+AGG + chr3_4:25326405-25326424 Msa0495730:intron 20.0%
!!! TTACAATTCAAGTTTGAATT+AGG + chr3_4:25326440-25326459 Msa0495730:intron 20.0%
!!! TACAATTCAAGTTTGAATTA+GGG + chr3_4:25326441-25326460 Msa0495730:intron 20.0%
!! CAAAGAAAGAATGAATAAAA+AGG - chr3_4:25326829-25326848 None:intergenic 20.0%
!! AAAATCATATAAAACCATTC+GGG - chr3_4:25326882-25326901 None:intergenic 20.0%
!!! GTAAAGTTTTTTGTTTTCTT+CGG + chr3_4:25326956-25326975 Msa0495730:intron 20.0%
!! AACAAAATCACAAACAATAT+GGG - chr3_4:25327393-25327412 None:intergenic 20.0%
!! AAACAAAATCACAAACAATA+TGG - chr3_4:25327394-25327413 None:intergenic 20.0%
!!! ATCCATTTTTTTAATCTGTT+TGG + chr3_4:25327418-25327437 Msa0495730:intron 20.0%
!! AACCAAACAGATTAAAAAAA+TGG - chr3_4:25327423-25327442 None:intergenic 20.0%
!! ATTAAAAAGAATGATGAACT+AGG - chr3_4:25327530-25327549 None:intergenic 20.0%
!! AAGACTATTGTAAATAAGAA+AGG - chr3_4:25327610-25327629 None:intergenic 20.0%
!! ATAGGATTCGTAATATTAAT+CGG - chr3_4:25327978-25327997 None:intergenic 20.0%
!!! TATTTATTGAAGTGTCTTTA+TGG + chr3_4:25328540-25328559 Msa0495730:intron 20.0%
!!! TAAAACTAAAAGCATGATAA+AGG + chr3_4:25328644-25328663 Msa0495730:intron 20.0%
!! TCATAAATCTCATAAAGTTT+CGG + chr3_4:25328811-25328830 Msa0495730:intron 20.0%
!! AGTAGTATAATTAACATTCA+TGG - chr3_4:25329071-25329090 None:intergenic 20.0%
!! TGAATGTTAATTATACTACT+TGG + chr3_4:25329071-25329090 Msa0495730:intron 20.0%
!! TAAATAAAACTTTCCAAATG+AGG + chr3_4:25329278-25329297 Msa0495730:intron 20.0%
!! AAATAAAACTTTCCAAATGA+GGG + chr3_4:25329279-25329298 Msa0495730:intron 20.0%
!!! TTAGTTTTATAATTACAGCA+AGG - chr3_4:25329385-25329404 None:intergenic 20.0%
!! ATAAATATAGATCAAATGCT+AGG + chr3_4:25329473-25329492 Msa0495730:intron 20.0%
!!! AATATTGATTTTTTCTTCCA+TGG - chr3_4:25329622-25329641 None:intergenic 20.0%
!!! TATTTTTTGAGTTACCATAT+TGG + chr3_4:25329638-25329657 Msa0495730:intron 20.0%
!! AAGATATCTAGGAAAATTAA+AGG + chr3_4:25330296-25330315 Msa0495730:intron 20.0%
!! AGATATCTAGGAAAATTAAA+GGG + chr3_4:25330297-25330316 Msa0495730:intron 20.0%
!! ATTAATTACAGAAATAGTTG+AGG + chr3_4:25331018-25331037 Msa0495730:intron 20.0%
!!! CAAAAACTTTTTTCTTTACA+GGG - chr3_4:25331621-25331640 None:intergenic 20.0%
!!! ACAAAAACTTTTTTCTTTAC+AGG - chr3_4:25331622-25331641 None:intergenic 20.0%
!! AATTATACTTTAATGCATAC+AGG + chr3_4:25333394-25333413 Msa0495730:intron 20.0%
!! AGATTATTAGAATATCAATG+AGG - chr3_4:25333556-25333575 None:intergenic 20.0%
!!! GATTTAATTTTAGAATGTGT+TGG + chr3_4:25333751-25333770 Msa0495730:intron 20.0%
!! AAGACTTAATTGAGAAATAT+GGG + chr3_4:25334073-25334092 Msa0495730:CDS 20.0%
!! AAAAATTCAGATTCTTCTTA+AGG + chr3_4:25334308-25334327 Msa0495730:CDS 20.0%
!!! TTTTTTAAGACTTGATGTAT+TGG + chr3_4:25334545-25334564 Msa0495730:intron 20.0%
!!! ATTTGATGCATTTATCATTT+TGG + chr3_4:25334723-25334742 Msa0495730:intron 20.0%
! TATGAATAACATTGCACAAA+GGG - chr3_4:25323552-25323571 None:intergenic 25.0%
! TTATGAATAACATTGCACAA+AGG - chr3_4:25323553-25323572 None:intergenic 25.0%
! ACATATCAAAATCTAACCTA+TGG - chr3_4:25323728-25323747 None:intergenic 25.0%
!!! ATAGGTTAGATTTTGATATG+TGG + chr3_4:25323727-25323746 Msa0495730:intron 25.0%
!! ACTTTGAATCATCTTTTAGA+TGG - chr3_4:25324084-25324103 None:intergenic 25.0%
!!! GTTTTTATGATGGAATTGTA+TGG - chr3_4:25324302-25324321 None:intergenic 25.0%
! TAACAAATGTAAATGCATGA+AGG + chr3_4:25324472-25324491 Msa0495730:intron 25.0%
!!! AAAGTTGAGAAATTTTTTGG+AGG + chr3_4:25324652-25324671 Msa0495730:five_prime_UTR 25.0%
!! ACTTGCTAAATCCAAAATAA+TGG + chr3_4:25324734-25324753 Msa0495730:intron 25.0%
!! AATTAAGGTAGCCATTATTT+TGG - chr3_4:25324748-25324767 None:intergenic 25.0%
!! CTTTAATTTCTTTCACCATA+TGG - chr3_4:25324809-25324828 None:intergenic 25.0%
! CAACTTTCATAGAATTATCA+TGG - chr3_4:25324873-25324892 None:intergenic 25.0%
! GATAATTCTATGAAAGTTGT+TGG + chr3_4:25324874-25324893 Msa0495730:intron 25.0%
!! TTTAAGATTGTTTGGGATTA+AGG + chr3_4:25324912-25324931 Msa0495730:intron 25.0%
! AATAATGAAACAAACCCATA+TGG - chr3_4:25325259-25325278 None:intergenic 25.0%
!! ACAAATGGGTTTACAATAAT+AGG + chr3_4:25325337-25325356 Msa0495730:intron 25.0%
! GTTTACAATAATAGGCTTAA+AGG + chr3_4:25325345-25325364 Msa0495730:intron 25.0%
!!! AAAGGAATGATTTTTTTGTG+TGG + chr3_4:25325363-25325382 Msa0495730:intron 25.0%
!!! TTTTTTGTGTGGAAATCAAA+TGG + chr3_4:25325374-25325393 Msa0495730:intron 25.0%
!! TTTTTGTGTGGAAATCAAAT+GGG + chr3_4:25325375-25325394 Msa0495730:intron 25.0%
!! ACTAAATGAACATCTTTTAC+TGG - chr3_4:25325422-25325441 None:intergenic 25.0%
!!! TTTAAGTTGGTAGACAAAAA+CGG - chr3_4:25325536-25325555 None:intergenic 25.0%
! TATGTCAAGGTTATTTAAGT+TGG - chr3_4:25325549-25325568 None:intergenic 25.0%
! AATTTACGTAATGCTCTTAA+TGG + chr3_4:25325692-25325711 Msa0495730:intron 25.0%
! GAACAACTAATAATTCTTGT+AGG + chr3_4:25325761-25325780 Msa0495730:intron 25.0%
! AAGAATATTGTAATATGTCG+CGG + chr3_4:25326002-25326021 Msa0495730:intron 25.0%
! TCCAATTTACAATCTTCTAT+CGG - chr3_4:25326028-25326047 None:intergenic 25.0%
! AAAGAGAATCTATATCCATT+AGG + chr3_4:25326155-25326174 Msa0495730:intron 25.0%
! TCTTGATTATCAACTATCTA+AGG - chr3_4:25326356-25326375 None:intergenic 25.0%
!!! GATAGTTGATAATCAAGATT+AGG + chr3_4:25326358-25326377 Msa0495730:intron 25.0%
! TTATACAGAATTAGAAACTG+AGG - chr3_4:25326488-25326507 None:intergenic 25.0%
! TCAGTTTCTAATTCTGTATA+AGG + chr3_4:25326487-25326506 Msa0495730:intron 25.0%
! CAGTTTCTAATTCTGTATAA+GGG + chr3_4:25326488-25326507 Msa0495730:intron 25.0%
! ACAATCTTTGCAAGTTTATT+TGG - chr3_4:25326928-25326947 None:intergenic 25.0%
!!! TTTAATGTAGGTATTGGTTT+TGG + chr3_4:25327035-25327054 Msa0495730:intron 25.0%
! TAGGAAAAATACAAAGCAAA+CGG - chr3_4:25327266-25327285 None:intergenic 25.0%
!! ACATTTAGTTTCATATATGG+TGG - chr3_4:25327886-25327905 None:intergenic 25.0%
!! GACACATTTAGTTTCATATA+TGG - chr3_4:25327889-25327908 None:intergenic 25.0%
!! TTCGTAATATTAATCGGTTT+CGG - chr3_4:25327972-25327991 None:intergenic 25.0%
! TAATATTACGAATCCTATGT+AGG + chr3_4:25327980-25327999 Msa0495730:intron 25.0%
! ATATGGAAACTAATTTCAGA+GGG - chr3_4:25328033-25328052 None:intergenic 25.0%
! TATATGGAAACTAATTTCAG+AGG - chr3_4:25328034-25328053 None:intergenic 25.0%
! CGAAATCATTTAATAGCATT+TGG + chr3_4:25328240-25328259 Msa0495730:intron 25.0%
! ATAGCATTTGGATTTCAAAA+AGG + chr3_4:25328252-25328271 Msa0495730:intron 25.0%
! TTCAAAAAGGATATGATGTT+TGG + chr3_4:25328265-25328284 Msa0495730:intron 25.0%
! TCAAAAAGGATATGATGTTT+GGG + chr3_4:25328266-25328285 Msa0495730:intron 25.0%
!!! TAGTTTTATTGAACGTATCA+GGG - chr3_4:25328632-25328651 None:intergenic 25.0%
!!! TTAGTTTTATTGAACGTATC+AGG - chr3_4:25328633-25328652 None:intergenic 25.0%
! AATAGATCATGCAATCATTA+GGG - chr3_4:25328700-25328719 None:intergenic 25.0%
!!! TTAACATTCATGGTTCTAAA+GGG - chr3_4:25329061-25329080 None:intergenic 25.0%
!!! ATTAACATTCATGGTTCTAA+AGG - chr3_4:25329062-25329081 None:intergenic 25.0%
! AATTTCAACTCTTCAATCAA+TGG - chr3_4:25329220-25329239 None:intergenic 25.0%
! TTGAAGAGTTGAAATTGTTA+TGG + chr3_4:25329224-25329243 Msa0495730:intron 25.0%
! TGAAGAGTTGAAATTGTTAT+GGG + chr3_4:25329225-25329244 Msa0495730:intron 25.0%
! TTGAAATTGTTATGGGATTT+GGG + chr3_4:25329232-25329251 Msa0495730:intron 25.0%
! GATCTATATTTATGATCCAT+GGG - chr3_4:25329466-25329485 None:intergenic 25.0%
! TGATCTATATTTATGATCCA+TGG - chr3_4:25329467-25329486 None:intergenic 25.0%
! AAAAATGCAAAAATACCAGA+TGG + chr3_4:25329913-25329932 Msa0495730:intron 25.0%
! AAAATGCAAAAATACCAGAT+GGG + chr3_4:25329914-25329933 Msa0495730:intron 25.0%
!! TTTTCGTTGTTTATGTCAAA+AGG + chr3_4:25330098-25330117 Msa0495730:intron 25.0%
! GAAAATTAAAGGGTTATGTT+CGG + chr3_4:25330307-25330326 Msa0495730:intron 25.0%
!! CCAATTCTAGAAAAAGAAAT+TGG - chr3_4:25330486-25330505 None:intergenic 25.0%
!!! CCAATTTCTTTTTCTAGAAT+TGG + chr3_4:25330483-25330502 Msa0495730:intron 25.0%
! ACGATGTCCAAAAATTTATA+CGG + chr3_4:25330598-25330617 Msa0495730:intron 25.0%
!! TCACTTACCGTATAAATTTT+TGG - chr3_4:25330608-25330627 None:intergenic 25.0%
! TGAAAATCCCAAAAAAAGAA+AGG + chr3_4:25330712-25330731 Msa0495730:intron 25.0%
! GAAAATCCCAAAAAAAGAAA+GGG + chr3_4:25330713-25330732 Msa0495730:intron 25.0%
! AAAATCCCAAAAAAAGAAAG+GGG + chr3_4:25330714-25330733 Msa0495730:intron 25.0%
!!! TTTTCTGGCTATGTAATTAA+CGG + chr3_4:25330860-25330879 Msa0495730:intron 25.0%
!! TGTTATTGGATTTTCATCTT+TGG - chr3_4:25330978-25330997 None:intergenic 25.0%
!! TAAATTACTGACTGTGTTAT+TGG - chr3_4:25330992-25331011 None:intergenic 25.0%
!!! TTGTGTTATTTAGATGTGAT+TGG + chr3_4:25331065-25331084 Msa0495730:intron 25.0%
!!! ATATGTATTTGTTATGGTCT+AGG + chr3_4:25331457-25331476 Msa0495730:intron 25.0%
! TCCTTTCGTTATGTATTAAT+TGG + chr3_4:25331659-25331678 Msa0495730:intron 25.0%
! ACCAATTAATACATAACGAA+AGG - chr3_4:25331663-25331682 None:intergenic 25.0%
!! ATGTATTAATTGGTAATTGC+AGG + chr3_4:25331669-25331688 Msa0495730:intron 25.0%
! AGTAGTCATGTAAACATTAT+TGG + chr3_4:25331803-25331822 Msa0495730:CDS 25.0%
! TTTCTCATCAAATTTCTTTG+AGG - chr3_4:25332239-25332258 None:intergenic 25.0%
! ATTTGATGAGAAAAACAAAG+AGG + chr3_4:25332246-25332265 Msa0495730:CDS 25.0%
! TTGATGAGTATATTGAAATG+AGG + chr3_4:25332506-25332525 Msa0495730:CDS 25.0%
! AAATGAAATGGAAGATGATA+TGG + chr3_4:25332576-25332595 Msa0495730:CDS 25.0%
!!! GTCTTAATAGTTTTGATTGT+TGG + chr3_4:25332664-25332683 Msa0495730:intron 25.0%
!! AGAAGACTTTAAGAAGTTAT+TGG + chr3_4:25333283-25333302 Msa0495730:CDS 25.0%
! TTAAGAAGTTATTGGTGTAT+TGG + chr3_4:25333291-25333310 Msa0495730:CDS 25.0%
! AAAATATTGCTCAACTGAAA+TGG + chr3_4:25333438-25333457 Msa0495730:CDS 25.0%
!! TTTTTCTCTTATAACAGCAA+AGG - chr3_4:25333486-25333505 None:intergenic 25.0%
! TGCTGTTATAAGAGAAAAAA+TGG + chr3_4:25333487-25333506 Msa0495730:CDS 25.0%
! TTATTAGAATATCAATGAGG+AGG - chr3_4:25333553-25333572 None:intergenic 25.0%
!!! TCCAATACCTTTTAATTTGT+TGG + chr3_4:25333712-25333731 Msa0495730:intron 25.0%
!! ACCAACAAATTAAAAGGTAT+TGG - chr3_4:25333716-25333735 None:intergenic 25.0%
!!! GATGTTTTGTTGTTTGTTAT+TGG + chr3_4:25333773-25333792 Msa0495730:intron 25.0%
!!! GTTAGTCATATATCTTGTTT+TGG + chr3_4:25333882-25333901 Msa0495730:intron 25.0%
!!! TTTGTATTGACTTTTGATTC+CGG + chr3_4:25333965-25333984 Msa0495730:intron 25.0%
! CAAGACTTAATTGAGAAATA+TGG + chr3_4:25334072-25334091 Msa0495730:CDS 25.0%
! TGATGAGGTAAAACAATTAA+AGG + chr3_4:25334230-25334249 Msa0495730:CDS 25.0%
GATTTCTATCGACAATATTG+AGG - chr3_4:25323164-25323183 None:intergenic 30.0%
GTTCGATTAAGAGTTTCAAT+TGG - chr3_4:25323284-25323303 None:intergenic 30.0%
ATTTGTAGACTATACGAAGA+GGG - chr3_4:25323590-25323609 None:intergenic 30.0%
TATTTGTAGACTATACGAAG+AGG - chr3_4:25323591-25323610 None:intergenic 30.0%
TTTGTAGAGTCTGAATATGA+TGG + chr3_4:25323831-25323850 Msa0495730:intron 30.0%
TTATCATCACAGTCATCTTT+CGG + chr3_4:25323880-25323899 Msa0495730:intron 30.0%
!! ATCAATGGATTATGTGAGAT+AGG - chr3_4:25323961-25323980 None:intergenic 30.0%
TGATTCAAAGTTTGAGTAGT+AGG + chr3_4:25324093-25324112 Msa0495730:intron 30.0%
AATTCCATCATAAAAACAGC+AGG + chr3_4:25324305-25324324 Msa0495730:intron 30.0%
!! TATTTCTGAAGTGTAAAGTG+AGG + chr3_4:25324344-25324363 Msa0495730:intron 30.0%
AATTACTGCATTCAATCACA+AGG - chr3_4:25324582-25324601 None:intergenic 30.0%
TTCAAGACCTGTTCAAATTT+AGG + chr3_4:25324616-25324635 Msa0495730:five_prime_UTR 30.0%
!! CTCAAAAGTATCCAAAACAT+TGG - chr3_4:25324964-25324983 None:intergenic 30.0%
!! CAATGTTTTGGATACTTTTG+AGG + chr3_4:25324962-25324981 Msa0495730:intron 30.0%
!!! ATACTTTTGAGGTCTGTTTT+GGG + chr3_4:25324973-25324992 Msa0495730:intron 30.0%
!!! TTGTTGTTTTTCTGCTGATA+CGG + chr3_4:25325007-25325026 Msa0495730:intron 30.0%
AATGCAAGACATACAAATAG+AGG - chr3_4:25325168-25325187 None:intergenic 30.0%
TTCAGGAATAGAAACTAGAA+TGG - chr3_4:25325452-25325471 None:intergenic 30.0%
! AAATTGAATTTGGTGGCATT+TGG + chr3_4:25325506-25325525 Msa0495730:intron 30.0%
AAAGCAACAAAGAAAACCAA+GGG - chr3_4:25325573-25325592 None:intergenic 30.0%
ATAATTCTTGCCTATGGTAA+GGG + chr3_4:25325786-25325805 Msa0495730:intron 30.0%
ATATACACTAAAAGAGTTGG+AGG - chr3_4:25325909-25325928 None:intergenic 30.0%
CTGATATACACTAAAAGAGT+TGG - chr3_4:25325912-25325931 None:intergenic 30.0%
AAAGTAAAAGGTTGTCCTAA+TGG - chr3_4:25326173-25326192 None:intergenic 30.0%
!! AGTTGATAATCAAGATTAGG+TGG + chr3_4:25326361-25326380 Msa0495730:intron 30.0%
! TAATCAAGATTAGGTGGATT+TGG + chr3_4:25326367-25326386 Msa0495730:intron 30.0%
!!! GGCTGTTGTTGTTATTTTTT+GGG + chr3_4:25326509-25326528 Msa0495730:intron 30.0%
! TTTAGTTTATGTTTGTCGCA+GGG + chr3_4:25326597-25326616 Msa0495730:intron 30.0%
CACTAAGAAAATACAATAGC+TGG - chr3_4:25326646-25326665 None:intergenic 30.0%
ATTATATGCAAGTGACTTTG+TGG - chr3_4:25326767-25326786 None:intergenic 30.0%
TGTTAGACTACATAAGAACT+TGG + chr3_4:25326855-25326874 Msa0495730:intron 30.0%
!!! AAGTTTTTTGTTTTCTTCGG+TGG + chr3_4:25326959-25326978 Msa0495730:intron 30.0%
!! ATGTGCTGTCTTTTGTTTAT+TGG + chr3_4:25326991-25327010 Msa0495730:intron 30.0%
!!! GGTATTGGTTTTGGAATTAT+AGG + chr3_4:25327044-25327063 Msa0495730:intron 30.0%
GTTGTTATGCTTGAATTTCA+CGG + chr3_4:25327069-25327088 Msa0495730:intron 30.0%
TTGTTATGCTTGAATTTCAC+GGG + chr3_4:25327070-25327089 Msa0495730:intron 30.0%
!!! AGTCTGGTGTTATGTTTTTT+TGG + chr3_4:25327123-25327142 Msa0495730:intron 30.0%
!!! GTCTGGTGTTATGTTTTTTT+GGG + chr3_4:25327124-25327143 Msa0495730:intron 30.0%
!!! TCTGGTGTTATGTTTTTTTG+GGG + chr3_4:25327125-25327144 Msa0495730:intron 30.0%
!!! GCTAGATTTATTTTAGTGGA+TGG + chr3_4:25327186-25327205 Msa0495730:intron 30.0%
! TGGATGGTTTCTTTATTTGT+AGG + chr3_4:25327202-25327221 Msa0495730:intron 30.0%
! GGATGGTTTCTTTATTTGTA+GGG + chr3_4:25327203-25327222 Msa0495730:intron 30.0%
!! TTTATTTGTAGGGCCATTTT+CGG + chr3_4:25327213-25327232 Msa0495730:intron 30.0%
AGGAAAAATACAAAGCAAAC+GGG - chr3_4:25327265-25327284 None:intergenic 30.0%
! GCTTTGTATTTTTCCTATTC+AGG + chr3_4:25327269-25327288 Msa0495730:intron 30.0%
TTACAAATCAAGAATGAGAG+AGG + chr3_4:25327493-25327512 Msa0495730:intron 30.0%
TACAAATCAAGAATGAGAGA+GGG + chr3_4:25327494-25327513 Msa0495730:intron 30.0%
TAGTTTCATATATGGTGGTT+AGG - chr3_4:25327881-25327900 None:intergenic 30.0%
TTCAATATGTGAACCTACAT+AGG - chr3_4:25327996-25328015 None:intergenic 30.0%
TATGGAAACTAATTTCAGAG+GGG - chr3_4:25328032-25328051 None:intergenic 30.0%
TTTGAACAGACTACTGTATA+TGG - chr3_4:25328050-25328069 None:intergenic 30.0%
!!! AACTTTTTTGCATCTTCGTT+GGG - chr3_4:25328438-25328457 None:intergenic 30.0%
CTAAATTGTCGTTCATCATT+CGG + chr3_4:25328514-25328533 Msa0495730:intron 30.0%
! TATTGAAGTGTCTTTATGGT+TGG + chr3_4:25328544-25328563 Msa0495730:intron 30.0%
! TAAAAGCATGATAAAGGACT+TGG + chr3_4:25328650-25328669 Msa0495730:intron 30.0%
! AAAAGCATGATAAAGGACTT+GGG + chr3_4:25328651-25328670 Msa0495730:intron 30.0%
CAATAGATCATGCAATCATT+AGG - chr3_4:25328701-25328720 None:intergenic 30.0%
CTAATGATTGCATGATCTAT+TGG + chr3_4:25328699-25328718 Msa0495730:intron 30.0%
AAATGAAGAAGAAAATCACG+AGG + chr3_4:25328778-25328797 Msa0495730:intron 30.0%
ACAGAGATCGTTTAAATGAT+GGG + chr3_4:25328921-25328940 Msa0495730:intron 30.0%
ACGTAATATAAGACTTGGAT+TGG + chr3_4:25329018-25329037 Msa0495730:intron 30.0%
TTATATGGCATTAAAACCAC+TGG - chr3_4:25329097-25329116 None:intergenic 30.0%
ATGTTGTCCTTATTAATTCC+TGG + chr3_4:25329154-25329173 Msa0495730:intron 30.0%
GTTGAAATTGTTATGGGATT+TGG + chr3_4:25329231-25329250 Msa0495730:intron 30.0%
TAGCCATAAGACATGTTATA+TGG + chr3_4:25329423-25329442 Msa0495730:intron 30.0%
GATCCATATAACATGTCTTA+TGG - chr3_4:25329429-25329448 None:intergenic 30.0%
TCAATGGGAAAAAAGAACAT+AGG + chr3_4:25329500-25329519 Msa0495730:intron 30.0%
! AAGAACTTCAACAATGCTTT+TGG + chr3_4:25329568-25329587 Msa0495730:intron 30.0%
!! AAAGTATTGTGCTTCCAATA+TGG - chr3_4:25329655-25329674 None:intergenic 30.0%
TAGTATAATTGGGACTTTGT+TGG + chr3_4:25329720-25329739 Msa0495730:intron 30.0%
AACGAACAAAGACGAATTAA+CGG - chr3_4:25330078-25330097 None:intergenic 30.0%
TTTATGTCAAAAGGTGATTG+AGG + chr3_4:25330107-25330126 Msa0495730:intron 30.0%
ACCATACTGTCAAAAAAACT+CGG - chr3_4:25330201-25330220 None:intergenic 30.0%
TACTCTACTGAAAGATATCT+AGG + chr3_4:25330285-25330304 Msa0495730:intron 30.0%
!! AAAAGGTGAAGCATTTTCTT+TGG + chr3_4:25330527-25330546 Msa0495730:intron 30.0%
! AAGGTTTGGATTTTGTTGAA+TGG + chr3_4:25330756-25330775 Msa0495730:intron 30.0%
AAACATCGTGCAATTCTATT+TGG - chr3_4:25330842-25330861 None:intergenic 30.0%
AGACTTAAAACACAAAACAG+CGG + chr3_4:25330914-25330933 Msa0495730:intron 30.0%
ACACAGTCAGTAATTTACTA+TGG + chr3_4:25330995-25331014 Msa0495730:intron 30.0%
ATAGTTGAGGTAGACTATTA+TGG + chr3_4:25331031-25331050 Msa0495730:intron 30.0%
TTTCAACAAGAGATGTTACA+TGG + chr3_4:25331129-25331148 Msa0495730:intron 30.0%
TAGTGTCTATTTGCATTTGA+AGG - chr3_4:25331208-25331227 None:intergenic 30.0%
TGAAACTTGTGAAGTTGAAT+TGG + chr3_4:25331306-25331325 Msa0495730:intron 30.0%
TAATTGCAGGAAAATGAAGA+CGG + chr3_4:25331682-25331701 Msa0495730:intron 30.0%
AGTCATGTAAACATTATTGG+TGG + chr3_4:25331806-25331825 Msa0495730:CDS 30.0%
TATTGGTGGAAACATTCAAA+AGG + chr3_4:25331820-25331839 Msa0495730:CDS 30.0%
CTCAATAGGTTTCATTTGTT+GGG - chr3_4:25331945-25331964 None:intergenic 30.0%
ACTCAATAGGTTTCATTTGT+TGG - chr3_4:25331946-25331965 None:intergenic 30.0%
ACAAATGAAACCTATTGAGT+CGG + chr3_4:25331946-25331965 Msa0495730:CDS 30.0%
! ACCTTTGGAAATCAAGTTAA+AGG + chr3_4:25332196-25332215 Msa0495730:CDS 30.0%
!! ACCTTTAACTTGATTTCCAA+AGG - chr3_4:25332200-25332219 None:intergenic 30.0%
ATGAGAAAAACAAAGAGGTA+AGG + chr3_4:25332251-25332270 Msa0495730:CDS 30.0%
ACATTGAACTTGATTTCCAA+GGG - chr3_4:25332311-25332330 None:intergenic 30.0%
AACATTGAACTTGATTTCCA+AGG - chr3_4:25332312-25332331 None:intergenic 30.0%
! TTGCTCATCAATTTTCTTTG+AGG - chr3_4:25332350-25332369 None:intergenic 30.0%
TGAGTATATTGAAATGAGGA+AGG + chr3_4:25332510-25332529 Msa0495730:CDS 30.0%
! ACCTTCAACTTCATTTTCAT+CGG - chr3_4:25332641-25332660 None:intergenic 30.0%
!!! GCTGAACTTAGTAGTTTTTT+GGG + chr3_4:25332911-25332930 Msa0495730:CDS 30.0%
!!! CTGAACTTAGTAGTTTTTTG+GGG + chr3_4:25332912-25332931 Msa0495730:CDS 30.0%
! TTGCTATTGTAAATGATGCT+TGG + chr3_4:25333168-25333187 Msa0495730:CDS 30.0%
AACTTCTTAAAGTCTTCTTC+CGG - chr3_4:25333281-25333300 None:intergenic 30.0%
TCTAATAATCTTGTCATGCT+TGG + chr3_4:25333565-25333584 Msa0495730:intron 30.0%
AGAACTCACAATTGCAATAT+TGG - chr3_4:25333690-25333709 None:intergenic 30.0%
!!! CTTTTAATTTGTTGGTGTCT+CGG + chr3_4:25333720-25333739 Msa0495730:intron 30.0%
! GATTTGCTTCATAGTTTGTA+CGG + chr3_4:25333808-25333827 Msa0495730:intron 30.0%
!!! TCTTGTTTTGGTGTTGATTT+TGG + chr3_4:25333894-25333913 Msa0495730:intron 30.0%
GGTAGTTGTTTAATGTTTGT+AGG + chr3_4:25333915-25333934 Msa0495730:intron 30.0%
! AGTTTTCACCATGTTATGTT+TGG + chr3_4:25333989-25334008 Msa0495730:intron 30.0%
TTCACTAACCAAACATAACA+TGG - chr3_4:25334000-25334019 None:intergenic 30.0%
! TCATTTCTCTTTAAGAGAGT+CGG - chr3_4:25334180-25334199 None:intergenic 30.0%
TAGAAGAGAACATAATGATG+AGG + chr3_4:25334215-25334234 Msa0495730:CDS 30.0%
AAAGGATCATATACAAGAGA+TGG + chr3_4:25334248-25334267 Msa0495730:CDS 30.0%
AATCTTACCTCATTATCATC+TGG - chr3_4:25334447-25334466 None:intergenic 30.0%
ACAAAGAAATAGAGTTAGTG+CGG + chr3_4:25334656-25334675 Msa0495730:intron 30.0%
!! ATGTTGATGGTTGTATTTGT+TGG + chr3_4:25334693-25334712 Msa0495730:intron 30.0%
CGATGAAGAATTTGAAGATT+TGG + chr3_4:25334823-25334842 Msa0495730:CDS 30.0%
ATTTCAGTGAGTGAGTAAGA+GGG - chr3_4:25323306-25323325 None:intergenic 35.0%
! TTGAGACTGAAAGTTGATTC+AGG - chr3_4:25323357-25323376 None:intergenic 35.0%
TTGAGATTTAAGTGAGGTGA+GGG - chr3_4:25323397-25323416 None:intergenic 35.0%
ATTGAGATTTAAGTGAGGTG+AGG - chr3_4:25323398-25323417 None:intergenic 35.0%
CTTCGATTGAGATTTAAGTG+AGG - chr3_4:25323403-25323422 None:intergenic 35.0%
CACTTAAATCTCAATCGAAG+AGG + chr3_4:25323403-25323422 Msa0495730:five_prime_UTR 35.0%
TTCATTAGATTTGGGCTCTA+TGG + chr3_4:25323442-25323461 Msa0495730:intron 35.0%
AGCAGATTTCATCTCTTGTT+CGG + chr3_4:25323628-25323647 Msa0495730:intron 35.0%
TTCAAAGTTTGAGTAGTAGG+AGG + chr3_4:25324096-25324115 Msa0495730:intron 35.0%
TTCCATAAAATCATCGACAC+TGG - chr3_4:25324129-25324148 None:intergenic 35.0%
TGTATGGGATTACAAGATGA+TGG + chr3_4:25324233-25324252 Msa0495730:intron 35.0%
GTATGGGATTACAAGATGAT+GGG + chr3_4:25324234-25324253 Msa0495730:intron 35.0%
TATGGGATTACAAGATGATG+GGG + chr3_4:25324235-25324254 Msa0495730:intron 35.0%
!!! CTTACCTGCTGTTTTTATGA+TGG - chr3_4:25324312-25324331 None:intergenic 35.0%
! TGTGTATTTGCTAGCAATGT+GGG - chr3_4:25324408-25324427 None:intergenic 35.0%
! ATGTGTATTTGCTAGCAATG+TGG - chr3_4:25324409-25324428 None:intergenic 35.0%
AGAATCGCCTAAATTTGAAC+AGG - chr3_4:25324626-25324645 None:intergenic 35.0%
! AGATTGTTTGGGATTAAGGT+TGG + chr3_4:25324916-25324935 Msa0495730:intron 35.0%
!!! GATACTTTTGAGGTCTGTTT+TGG + chr3_4:25324972-25324991 Msa0495730:intron 35.0%
!!! TACTTTTGAGGTCTGTTTTG+GGG + chr3_4:25324974-25324993 Msa0495730:intron 35.0%
!!! TGTTGTTTTTCTGCTGATAC+GGG + chr3_4:25325008-25325027 Msa0495730:intron 35.0%
!!! GGTGTTGATCTTGTTTTTTG+AGG + chr3_4:25325122-25325141 Msa0495730:intron 35.0%
CAAAGCAACAAAGAAAACCA+AGG - chr3_4:25325574-25325593 None:intergenic 35.0%
!! TGCTACTTTCTTCATCTACT+AGG + chr3_4:25325592-25325611 Msa0495730:intron 35.0%
TAGGTGATAATTCTTGCCTA+TGG + chr3_4:25325780-25325799 Msa0495730:intron 35.0%
GATAATTCTTGCCTATGGTA+AGG + chr3_4:25325785-25325804 Msa0495730:intron 35.0%
TAATTCTTGCCTATGGTAAG+GGG + chr3_4:25325787-25325806 Msa0495730:intron 35.0%
! TAAGGGGTACATACTTCTAT+AGG + chr3_4:25325803-25325822 Msa0495730:intron 35.0%
! AAGGGGTACATACTTCTATA+GGG + chr3_4:25325804-25325823 Msa0495730:intron 35.0%
GCCGATAGAAGATTGTAAAT+TGG + chr3_4:25326024-25326043 Msa0495730:intron 35.0%
!!! GGGCTGTTGTTGTTATTTTT+TGG + chr3_4:25326508-25326527 Msa0495730:intron 35.0%
!! TTTTTGGGCGATTTTTGCTT+TGG + chr3_4:25326524-25326543 Msa0495730:intron 35.0%
! TTTTGGGCGATTTTTGCTTT+GGG + chr3_4:25326525-25326544 Msa0495730:intron 35.0%
!! CTTGTGGTGTTTGATTTTCT+GGG + chr3_4:25326574-25326593 Msa0495730:intron 35.0%
! GTTTAGTTTATGTTTGTCGC+AGG + chr3_4:25326596-25326615 Msa0495730:intron 35.0%
TTAGTTTATGTTTGTCGCAG+GGG + chr3_4:25326598-25326617 Msa0495730:intron 35.0%
!! CTGCGTTTTAATGTAGGTAT+TGG + chr3_4:25327029-25327048 Msa0495730:intron 35.0%
!!! AATTTCACGGGAGTTTTTTG+TGG + chr3_4:25327082-25327101 Msa0495730:intron 35.0%
!!! GAGTTTTTTGTGGCTGTATT+GGG + chr3_4:25327092-25327111 Msa0495730:intron 35.0%
TTGTTGTCATGCCTTTGAAT+TGG + chr3_4:25327161-25327180 Msa0495730:intron 35.0%
AAATCTAGCAGCCAATTCAA+AGG - chr3_4:25327175-25327194 None:intergenic 35.0%
!!! GGCTGCTAGATTTATTTTAG+TGG + chr3_4:25327182-25327201 Msa0495730:intron 35.0%
TTGGGTTATCCATCTTTGTA+CGG + chr3_4:25327237-25327256 Msa0495730:intron 35.0%
AAGTACAAATCTGCCTGAAT+AGG - chr3_4:25327285-25327304 None:intergenic 35.0%
ACAAATCAAGAATGAGAGAG+GGG + chr3_4:25327495-25327514 Msa0495730:intron 35.0%
!! AGAGAAAGTACTCTTCAAGA+AGG + chr3_4:25327747-25327766 Msa0495730:five_prime_UTR 35.0%
! AAAACCTGATGGACAAAGAA+TGG + chr3_4:25328067-25328086 Msa0495730:intron 35.0%
! GAGAGTGAAGAGTATGAAAT+TGG + chr3_4:25328105-25328124 Msa0495730:intron 35.0%
TGTTGTAACATGTAGCACAA+GGG - chr3_4:25328194-25328213 None:intergenic 35.0%
CTACATGTTACAACAGCAAA+TGG + chr3_4:25328199-25328218 Msa0495730:intron 35.0%
ACAACAGCAAATGGTTTACA+AGG + chr3_4:25328208-25328227 Msa0495730:intron 35.0%
!! GATCAAGTTGACGATATTGA+TGG + chr3_4:25328354-25328373 Msa0495730:intron 35.0%
GAAGAACACAGAGTTAATGA+AGG + chr3_4:25328411-25328430 Msa0495730:intron 35.0%
!!! ACTTTTTTGCATCTTCGTTG+GGG - chr3_4:25328437-25328456 None:intergenic 35.0%
!!! GAACTTTTTTGCATCTTCGT+TGG - chr3_4:25328439-25328458 None:intergenic 35.0%
ATCCAAACAAGAGTTGTATC+CGG + chr3_4:25328476-25328495 Msa0495730:intron 35.0%
GTATCAGGGATGTTCAAAAA+AGG - chr3_4:25328618-25328637 None:intergenic 35.0%
AAAGCATGATAAAGGACTTG+GGG + chr3_4:25328652-25328671 Msa0495730:intron 35.0%
GTTGTTCATGTGTTCAAAGA+CGG + chr3_4:25328877-25328896 Msa0495730:intron 35.0%
GACAGAGATCGTTTAAATGA+TGG + chr3_4:25328920-25328939 Msa0495730:intron 35.0%
! GTTTAAATGATGGGAAGTTG+AGG + chr3_4:25328930-25328949 Msa0495730:intron 35.0%
TAATTATACTACTTGGCCAG+TGG + chr3_4:25329078-25329097 Msa0495730:intron 35.0%
ATCCAAGGTGGAAAGTTATA+TGG - chr3_4:25329112-25329131 None:intergenic 35.0%
CTTTCGTCCAGGAATTAATA+AGG - chr3_4:25329164-25329183 None:intergenic 35.0%
TACACATCAATGTCATTACC+TGG - chr3_4:25329190-25329209 None:intergenic 35.0%
TCAACTCTTCAATCAATGGT+TGG - chr3_4:25329216-25329235 None:intergenic 35.0%
TCAAATGCTAGGAGTTTCAA+TGG + chr3_4:25329484-25329503 Msa0495730:intron 35.0%
CAAATGCTAGGAGTTTCAAT+GGG + chr3_4:25329485-25329504 Msa0495730:intron 35.0%
CACCACCAGAATTGTTAAAT+GGG + chr3_4:25329524-25329543 Msa0495730:intron 35.0%
ACCACCAGAATTGTTAAATG+GGG + chr3_4:25329525-25329544 Msa0495730:intron 35.0%
TGTTCCCCATTTAACAATTC+TGG - chr3_4:25329532-25329551 None:intergenic 35.0%
GTTAAATGGGGAACAAATCT+TGG + chr3_4:25329537-25329556 Msa0495730:intron 35.0%
TTGCAAAAGAATTGCAGTGA+TGG + chr3_4:25329595-25329614 Msa0495730:intron 35.0%
TGTGCATCACATCAAGATTA+TGG - chr3_4:25329681-25329700 None:intergenic 35.0%
ACGTTTAGACTTACAAGAGA+TGG + chr3_4:25329777-25329796 Msa0495730:intron 35.0%
CGTTTAGACTTACAAGAGAT+GGG + chr3_4:25329778-25329797 Msa0495730:intron 35.0%
AAAGAAACTTCACCCAAAAG+AGG + chr3_4:25329807-25329826 Msa0495730:intron 35.0%
! AGTTTTCTCATTTGCACTCA+TGG - chr3_4:25329875-25329894 None:intergenic 35.0%
CTTGCTGAAAGAAAACTTAG+CGG + chr3_4:25329967-25329986 Msa0495730:intron 35.0%
ACGAACAAAGACGAATTAAC+GGG - chr3_4:25330077-25330096 None:intergenic 35.0%
!! GAGGGAAAATTGTTTCTAAC+TGG - chr3_4:25330179-25330198 None:intergenic 35.0%
TACTGTCAAAAAAACTCGGA+GGG - chr3_4:25330197-25330216 None:intergenic 35.0%
ATACTGTCAAAAAAACTCGG+AGG - chr3_4:25330198-25330217 None:intergenic 35.0%
!!! TCCGAGTTTTTTTGACAGTA+TGG + chr3_4:25330197-25330216 Msa0495730:intron 35.0%
ACCTCATTCACTAGATGTAT+CGG - chr3_4:25330231-25330250 None:intergenic 35.0%
TCTAGTGAATGAGGTAAGAA+TGG + chr3_4:25330236-25330255 Msa0495730:intron 35.0%
CTAGTGAATGAGGTAAGAAT+GGG + chr3_4:25330237-25330256 Msa0495730:intron 35.0%
! TACATAGTGGTGTTGAAACA+AGG + chr3_4:25330406-25330425 Msa0495730:intron 35.0%
! TCTAGAATTGGTCATCCTAT+AGG + chr3_4:25330495-25330514 Msa0495730:intron 35.0%
!!! CCTTTTTTCTTTCCTCCTAT+AGG - chr3_4:25330513-25330532 None:intergenic 35.0%
CCTATAGGAGGAAAGAAAAA+AGG + chr3_4:25330510-25330529 Msa0495730:intron 35.0%
TTTCTTTGGATTGCAAGTCA+AGG + chr3_4:25330541-25330560 Msa0495730:intron 35.0%
! GTGAACATACTTGTAGGTTT+TGG + chr3_4:25330624-25330643 Msa0495730:intron 35.0%
!!! TTCCACCCCTTTCTTTTTTT+GGG - chr3_4:25330722-25330741 None:intergenic 35.0%
TGGAACAAATCAAAGAGTCA+AGG + chr3_4:25330737-25330756 Msa0495730:intron 35.0%
CAAATCAAAGAGTCAAGGTT+TGG + chr3_4:25330742-25330761 Msa0495730:intron 35.0%
! AGAATTGCACGATGTTTTTC+TGG + chr3_4:25330845-25330864 Msa0495730:intron 35.0%
TTGAGGTAGACTATTATGGT+AGG + chr3_4:25331035-25331054 Msa0495730:intron 35.0%
AAGCTGAAGAGGAAAAGTTT+GGG + chr3_4:25331092-25331111 Msa0495730:intron 35.0%
CTTGAGAAGCCAATACAAAA+GGG - chr3_4:25331159-25331178 None:intergenic 35.0%
ACTTGAGAAGCCAATACAAA+AGG - chr3_4:25331160-25331179 None:intergenic 35.0%
GATCTTCAACGTAGAAACAT+TGG - chr3_4:25331186-25331205 None:intergenic 35.0%
ATGTTGTGAAGTCTGTTCAA+AGG + chr3_4:25331227-25331246 Msa0495730:intron 35.0%
TGTTGTGAAGTCTGTTCAAA+GGG + chr3_4:25331228-25331247 Msa0495730:intron 35.0%
CTTGTGAAGTTGAATTGGTT+AGG + chr3_4:25331311-25331330 Msa0495730:intron 35.0%
AATTGCAGGAAAATGAAGAC+GGG + chr3_4:25331683-25331702 Msa0495730:intron 35.0%
AGTCCAGCAATGAATTATTG+CGG + chr3_4:25331735-25331754 Msa0495730:CDS 35.0%
ATCACATTTCTAATTGCCGA+TGG - chr3_4:25331863-25331882 None:intergenic 35.0%
TATTCAATGACTGCTTCAGT+TGG - chr3_4:25331910-25331929 None:intergenic 35.0%
!! TTGTTCACAGAGGTATTAAG+AGG + chr3_4:25331978-25331997 Msa0495730:CDS 35.0%
CTAAGAAAATTGTTGAGCAG+AGG + chr3_4:25332020-25332039 Msa0495730:CDS 35.0%
AAAATTGTTGAGCAGAGGAA+AGG + chr3_4:25332025-25332044 Msa0495730:CDS 35.0%
AAATTGTTGAGCAGAGGAAA+GGG + chr3_4:25332026-25332045 Msa0495730:CDS 35.0%
TAAGAAATTGAAGTCTACCG+TGG + chr3_4:25332069-25332088 Msa0495730:CDS 35.0%
TTGCACATCAAAATTCTTCG+AGG - chr3_4:25332128-25332147 None:intergenic 35.0%
! TTTTGATGTGCAACACAAAG+AGG + chr3_4:25332135-25332154 Msa0495730:CDS 35.0%
!! TTTCTTTGAGGCATGTGATT+CGG - chr3_4:25332338-25332357 None:intergenic 35.0%
ATGAGCAAACCAAAGAGTTA+AGG + chr3_4:25332362-25332381 Msa0495730:CDS 35.0%
AAACCAAGTTCAAGGATCAA+CGG + chr3_4:25332426-25332445 Msa0495730:CDS 35.0%
CTATTATGTGCTTTATGTGC+AGG + chr3_4:25332767-25332786 Msa0495730:intron 35.0%
GCAGGATTAATAAGAAAACG+AGG + chr3_4:25332785-25332804 Msa0495730:intron 35.0%
!!! GGCTGAACTTAGTAGTTTTT+TGG + chr3_4:25332910-25332929 Msa0495730:CDS 35.0%
TTCCAATTATTGAAGGTGAG+AGG - chr3_4:25332965-25332984 None:intergenic 35.0%
TCTCACCTTCAATAATTGGA+AGG + chr3_4:25332964-25332983 Msa0495730:CDS 35.0%
CAAAGCCTTCCAATTATTGA+AGG - chr3_4:25332972-25332991 None:intergenic 35.0%
CTTCAATAATTGGAAGGCTT+TGG + chr3_4:25332970-25332989 Msa0495730:CDS 35.0%
ATGAAGAAATAGATCCAGTC+TGG + chr3_4:25333008-25333027 Msa0495730:CDS 35.0%
TGAAGAAATAGATCCAGTCT+GGG + chr3_4:25333009-25333028 Msa0495730:CDS 35.0%
!!! TATGTGTCTGTTATTTTCGC+AGG + chr3_4:25333106-25333125 Msa0495730:intron 35.0%
TTAGAATATCAATGAGGAGG+CGG - chr3_4:25333550-25333569 None:intergenic 35.0%
AAGTAAGAAAGGAAAAGAGC+TGG + chr3_4:25333655-25333674 Msa0495730:CDS 35.0%
CGAGACACCAACAAATTAAA+AGG - chr3_4:25333722-25333741 None:intergenic 35.0%
CATAACATGGTGAAAACTAC+CGG - chr3_4:25333987-25334006 None:intergenic 35.0%
! ATTTCTCTTTAAGAGAGTCG+GGG - chr3_4:25334178-25334197 None:intergenic 35.0%
! CATTTCTCTTTAAGAGAGTC+GGG - chr3_4:25334179-25334198 None:intergenic 35.0%
!!! AGTGGTGTTTTGACTCAATA+TGG - chr3_4:25334334-25334353 None:intergenic 35.0%
ATATTGAGTCAAAACACCAC+TGG + chr3_4:25334333-25334352 Msa0495730:CDS 35.0%
TATTGAGTCAAAACACCACT+GGG + chr3_4:25334334-25334353 Msa0495730:CDS 35.0%
! ATTTGCTCCAGATGATAATG+AGG + chr3_4:25334437-25334456 Msa0495730:CDS 35.0%
GTTCGATTGAGATTTCTGTG+CGG - chr3_4:25323202-25323221 None:intergenic 40.0%
! TCAGGATTCTGAGAGATTGA+GGG - chr3_4:25323224-25323243 None:intergenic 40.0%
! TTCAGGATTCTGAGAGATTG+AGG - chr3_4:25323225-25323244 None:intergenic 40.0%
TGAGTTAGAGGATTCGATTC+AGG - chr3_4:25323242-25323261 None:intergenic 40.0%
TTGGTCTGAGAGATTTCAGT+GGG - chr3_4:25323265-25323284 None:intergenic 40.0%
! ATTGGTCTGAGAGATTTCAG+TGG - chr3_4:25323266-25323285 None:intergenic 40.0%
GATTTCAGTGAGTGAGTAAG+AGG - chr3_4:25323307-25323326 None:intergenic 40.0%
! TCAGGATTCTGAGAGAATGA+AGG - chr3_4:25323339-25323358 None:intergenic 40.0%
GAATAACATTGCACAAAGGG+TGG - chr3_4:25323549-25323568 None:intergenic 40.0%
GGGTCAATTCAAACAAGCAA+TGG - chr3_4:25323693-25323712 None:intergenic 40.0%
TTGCTTGTTTGAATTGACCC+AGG + chr3_4:25323693-25323712 Msa0495730:intron 40.0%
ACCTATGGTTATTGCATCCT+GGG - chr3_4:25323713-25323732 None:intergenic 40.0%
AACCTATGGTTATTGCATCC+TGG - chr3_4:25323714-25323733 None:intergenic 40.0%
AGTCATCAACATGTTGAGAC+AGG - chr3_4:25323926-25323945 None:intergenic 40.0%
!!! GACCAGTGTCGATGATTTTA+TGG + chr3_4:25324124-25324143 Msa0495730:intron 40.0%
! TACCTTGTCTAGAGTGACAT+TGG + chr3_4:25324172-25324191 Msa0495730:intron 40.0%
ATCCAATGTCACTCTAGACA+AGG - chr3_4:25324177-25324196 None:intergenic 40.0%
! ATGGGATTACAAGATGATGG+GGG + chr3_4:25324236-25324255 Msa0495730:intron 40.0%
! TTCGGCGATAACCAATGTTT+TGG + chr3_4:25324950-25324969 Msa0495730:intron 40.0%
!!! GGCTGTTTGTTTTGGTTTGT+GGG + chr3_4:25325029-25325048 Msa0495730:intron 40.0%
!!! GCTGTTTGTTTTGGTTTGTG+GGG + chr3_4:25325030-25325049 Msa0495730:intron 40.0%
!! TTGGGTTAGCCTCATCAAAA+TGG + chr3_4:25325065-25325084 Msa0495730:intron 40.0%
!! TGGGTTAGCCTCATCAAAAT+GGG + chr3_4:25325066-25325085 Msa0495730:intron 40.0%
!! TGAACTTGCTGGTGTTCTAT+AGG + chr3_4:25325100-25325119 Msa0495730:intron 40.0%
!! GAACTTGCTGGTGTTCTATA+GGG + chr3_4:25325101-25325120 Msa0495730:intron 40.0%
!! ATAGAGGTGCCACATATAGA+CGG - chr3_4:25325152-25325171 None:intergenic 40.0%
ACAAGGCAACATGACTATTC+AGG - chr3_4:25325469-25325488 None:intergenic 40.0%
AATAACCTTGACATAGCCCT+TGG + chr3_4:25325554-25325573 Msa0495730:intron 40.0%
AAGTATGTACCCCTTACCAT+AGG - chr3_4:25325799-25325818 None:intergenic 40.0%
! AGGGGTACATACTTCTATAG+GGG + chr3_4:25325805-25325824 Msa0495730:intron 40.0%
!! GCTTGTGGTGTTTGATTTTC+TGG + chr3_4:25326573-25326592 Msa0495730:intron 40.0%
TGGCATGTTAATGCATCAAG+AGG - chr3_4:25326747-25326766 None:intergenic 40.0%
!! GCTGTTCTGCGTTTTAATGT+AGG + chr3_4:25327023-25327042 Msa0495730:intron 40.0%
!!! GGAGTTTTTTGTGGCTGTAT+TGG + chr3_4:25327091-25327110 Msa0495730:intron 40.0%
! TTTTTGTGGCTGTATTGGGT+TGG + chr3_4:25327096-25327115 Msa0495730:intron 40.0%
!! GTATTGGGTTGGATTTAGTC+TGG + chr3_4:25327107-25327126 Msa0495730:intron 40.0%
TGGATAACCCAAACCGAAAA+TGG - chr3_4:25327229-25327248 None:intergenic 40.0%
! GAAAGGAGTACATCGACATT+AGG - chr3_4:25327593-25327612 None:intergenic 40.0%
TCCACCTTCTCTTCTAATCA+GGG + chr3_4:25327708-25327727 Msa0495730:five_prime_UTR 40.0%
AATGCCCTGATTAGAAGAGA+AGG - chr3_4:25327715-25327734 None:intergenic 40.0%
!! CTAATCAGGGCATTTGTTGT+TGG + chr3_4:25327721-25327740 Msa0495730:five_prime_UTR 40.0%
AGTGTCAGATACAGATTGTG+TGG - chr3_4:25327919-25327938 None:intergenic 40.0%
! AATCGGTTTCGGTTTCAGAT+TGG - chr3_4:25327961-25327980 None:intergenic 40.0%
GTAGTCTGTTCAAAACCTGA+TGG + chr3_4:25328056-25328075 Msa0495730:intron 40.0%
TTGTCCATTCTTTGTCCATC+AGG - chr3_4:25328074-25328093 None:intergenic 40.0%
ATACTCTTCACTCTCTCTAG+CGG - chr3_4:25328100-25328119 None:intergenic 40.0%
! CACAAAATCTCTTTTCCACG+GGG - chr3_4:25328171-25328190 None:intergenic 40.0%
! GCACAAAATCTCTTTTCCAC+GGG - chr3_4:25328172-25328191 None:intergenic 40.0%
! GGCACAAAATCTCTTTTCCA+CGG - chr3_4:25328173-25328192 None:intergenic 40.0%
CTGTTGTAACATGTAGCACA+AGG - chr3_4:25328195-25328214 None:intergenic 40.0%
! TATGATGTTTGGGTTCGTCA+TGG + chr3_4:25328276-25328295 Msa0495730:intron 40.0%
TTCGTCATGGTGAGAAGATA+CGG + chr3_4:25328289-25328308 Msa0495730:intron 40.0%
!! CGATATTGATGGACTGTTGT+CGG + chr3_4:25328365-25328384 Msa0495730:intron 40.0%
TCCAAACAAGAGTTGTATCC+GGG + chr3_4:25328477-25328496 Msa0495730:intron 40.0%
TTAGAGAATGTTTCGCAACC+CGG - chr3_4:25328498-25328517 None:intergenic 40.0%
GATACTTCTTGCCATGTTTG+TGG + chr3_4:25328737-25328756 Msa0495730:intron 40.0%
! TCTTCATTTTCAATCCACCG+TGG - chr3_4:25328767-25328786 None:intergenic 40.0%
ATGAACAACCGTTGAAGTCT+CGG - chr3_4:25328866-25328885 None:intergenic 40.0%
!! TCATCCTGAATTTGCTGTTG+AGG + chr3_4:25328994-25329013 Msa0495730:intron 40.0%
GAGGCACGTAATATAAGACT+TGG + chr3_4:25329013-25329032 Msa0495730:intron 40.0%
TGCCATATAACTTTCCACCT+TGG + chr3_4:25329107-25329126 Msa0495730:intron 40.0%
ACTCTTCAATCAATGGTTGG+AGG - chr3_4:25329213-25329232 None:intergenic 40.0%
TGGACAATTAGTGACTTTCC+CGG + chr3_4:25329313-25329332 Msa0495730:intron 40.0%
AATTACAGCAAGGACATGCT+AGG - chr3_4:25329375-25329394 None:intergenic 40.0%
!! TCATCGTGTATTTTTGCCCA+TGG + chr3_4:25329447-25329466 Msa0495730:intron 40.0%
CCATTTAACAATTCTGGTGG+TGG - chr3_4:25329526-25329545 None:intergenic 40.0%
CCACCACCAGAATTGTTAAA+TGG + chr3_4:25329523-25329542 Msa0495730:intron 40.0%
TCCCCATTTAACAATTCTGG+TGG - chr3_4:25329529-25329548 None:intergenic 40.0%
TGGGACTTTGTTGGATATCA+CGG + chr3_4:25329729-25329748 Msa0495730:intron 40.0%
! CGCTAAGTTTTCTTTCAGCA+AGG - chr3_4:25329969-25329988 None:intergenic 40.0%
GGTGATTGAGGTTGAAGATT+TGG + chr3_4:25330119-25330138 Msa0495730:intron 40.0%
TACATCCACCGAAATTGAAC+AGG - chr3_4:25330267-25330286 None:intergenic 40.0%
TTCTATTGCTGAGGGTTATG+TGG + chr3_4:25330350-25330369 Msa0495730:intron 40.0%
TGCTCGCGATATTTACATAG+TGG + chr3_4:25330393-25330412 Msa0495730:intron 40.0%
CAAGGTTTAGTAGAATGCCA+AGG + chr3_4:25330424-25330443 Msa0495730:intron 40.0%
TGACACTTATCGATGTTCCT+TGG - chr3_4:25330444-25330463 None:intergenic 40.0%
AAGTGTCATCCTGATGAACT+TGG + chr3_4:25330456-25330475 Msa0495730:intron 40.0%
ATTGGACTTCCAAGTTCATC+AGG - chr3_4:25330468-25330487 None:intergenic 40.0%
AGAATTGGTCATCCTATAGG+AGG + chr3_4:25330498-25330517 Msa0495730:intron 40.0%
CGGTAAGTGAACATACTTGT+AGG + chr3_4:25330618-25330637 Msa0495730:intron 40.0%
ATCCCAAAAAAAGAAAGGGG+TGG + chr3_4:25330717-25330736 Msa0495730:intron 40.0%
!!! GTTCCACCCCTTTCTTTTTT+TGG - chr3_4:25330723-25330742 None:intergenic 40.0%
TGCAATTCTATTTGGTCCTC+TGG - chr3_4:25330834-25330853 None:intergenic 40.0%
! TAGCATCACGTTGTTTCGTA+TGG - chr3_4:25330895-25330914 None:intergenic 40.0%
!! TGATTGGTTTGAAGCTGAAG+AGG + chr3_4:25331081-25331100 Msa0495730:intron 40.0%
GAAGCTGAAGAGGAAAAGTT+TGG + chr3_4:25331091-25331110 Msa0495730:intron 40.0%
! CATGGATGACCCTTTTGTAT+TGG + chr3_4:25331147-25331166 Msa0495730:intron 40.0%
CTTCAACGTAGAAACATTGG+TGG - chr3_4:25331183-25331202 None:intergenic 40.0%
GATAGATTTACTGCATGCTC+TGG - chr3_4:25331277-25331296 None:intergenic 40.0%
GGTTTGTCAGTAATTGTTGG+TGG - chr3_4:25331346-25331365 None:intergenic 40.0%
GGAGGTTTGTCAGTAATTGT+TGG - chr3_4:25331349-25331368 None:intergenic 40.0%
TCTATTTCATCTGACACGAG+TGG - chr3_4:25331370-25331389 None:intergenic 40.0%
AGGAAAATGAAGACGGGTAA+TGG + chr3_4:25331689-25331708 Msa0495730:intron 40.0%
CTTCCGCAATAATTCATTGC+TGG - chr3_4:25331741-25331760 None:intergenic 40.0%
AAACCTATTGAGTCGGACAA+AGG + chr3_4:25331953-25331972 Msa0495730:CDS 40.0%
AACCTATTGAGTCGGACAAA+GGG + chr3_4:25331954-25331973 Msa0495730:CDS 40.0%
!! CAGAGGTATTAAGAGGCAAT+TGG + chr3_4:25331985-25332004 Msa0495730:CDS 40.0%
! ACCTTCAACTTGATGATCCA+CGG - chr3_4:25332089-25332108 None:intergenic 40.0%
ATGTGCAACACAAAGAGGTA+AGG + chr3_4:25332140-25332159 Msa0495730:CDS 40.0%
GGCATGACACTACTCTTAAA+AGG + chr3_4:25332161-25332180 Msa0495730:CDS 40.0%
GACACTACTCTTAAAAGGCA+AGG + chr3_4:25332166-25332185 Msa0495730:CDS 40.0%
AGGCAAGGAAAATCAACCTT+TGG + chr3_4:25332181-25332200 Msa0495730:CDS 40.0%
GAAAAACAAAGAGGTAAGGC+AGG + chr3_4:25332255-25332274 Msa0495730:CDS 40.0%
GACAATACTCTTAAGAGGCA+AGG + chr3_4:25332277-25332296 Msa0495730:CDS 40.0%
ATTGTCCTGCCTTAACTCTT+TGG - chr3_4:25332374-25332393 None:intergenic 40.0%
GACAATACTCTTATGAGGCA+AGG + chr3_4:25332388-25332407 Msa0495730:CDS 40.0%
TATTCCAAAATGTCCCGCTT+TGG + chr3_4:25332480-25332499 Msa0495730:CDS 40.0%
ATACTCATCAAGTGCCAAAG+CGG - chr3_4:25332497-25332516 None:intergenic 40.0%
GAAATGAGGAAGGAACAACA+TGG + chr3_4:25332520-25332539 Msa0495730:CDS 40.0%
GCCGATGAAAATGAAGTTGA+AGG + chr3_4:25332637-25332656 Msa0495730:CDS 40.0%
TGCTCGTGCAAAGTAGAAAT+TGG + chr3_4:25332689-25332708 Msa0495730:intron 40.0%
GAGATCACGTTGAATGAAGA+AGG + chr3_4:25332857-25332876 Msa0495730:CDS 40.0%
AATGAAGAAGGACAACCGAT+TGG + chr3_4:25332869-25332888 Msa0495730:CDS 40.0%
! CTCTTTTCATCTGGTCCAAT+CGG - chr3_4:25332887-25332906 None:intergenic 40.0%
GTCCTCTCACCTTCAATAAT+TGG + chr3_4:25332960-25332979 Msa0495730:CDS 40.0%
! GAAGGCTTTGGTTAAGTCTT+GGG + chr3_4:25332982-25333001 Msa0495730:CDS 40.0%
ACATTGACATATTCCCAGAC+TGG - chr3_4:25333025-25333044 None:intergenic 40.0%
GTTGAAAAATCGTCCAGAAG+AGG + chr3_4:25333253-25333272 Msa0495730:CDS 40.0%
ACTGAAATGGAGACATCGAA+CGG + chr3_4:25333451-25333470 Msa0495730:CDS 40.0%
ATGAACATTTCCGCTTGACT+GGG - chr3_4:25333623-25333642 None:intergenic 40.0%
AATGAACATTTCCGCTTGAC+TGG - chr3_4:25333624-25333643 None:intergenic 40.0%
GCTACACGTCAAAGTAAGAA+AGG + chr3_4:25333644-25333663 Msa0495730:CDS 40.0%
! TGCTTCATAGTTTGTACGGT+TGG + chr3_4:25333812-25333831 Msa0495730:intron 40.0%
!! TACGGTTGGCACTTTGATTT+TGG + chr3_4:25333826-25333845 Msa0495730:intron 40.0%
! CTTTGAAAGGCTTCTTCAGA+AGG - chr3_4:25334102-25334121 None:intergenic 40.0%
GAAGCCTTTCAAAGTGTATG+CGG + chr3_4:25334108-25334127 Msa0495730:CDS 40.0%
TTTGCCGCATACACTTTGAA+AGG - chr3_4:25334115-25334134 None:intergenic 40.0%
TATGCGGCAAAGAAAAACCT+GGG + chr3_4:25334124-25334143 Msa0495730:CDS 40.0%
GGATCATATACAAGAGATGG+AGG + chr3_4:25334251-25334270 Msa0495730:CDS 40.0%
AAGGAAACAGAAGCAATGGA+AGG + chr3_4:25334285-25334304 Msa0495730:CDS 40.0%
CTAAAGTAGCCCACCTAAAT+TGG + chr3_4:25335016-25335035 Msa0495730:three_prime_UTR 40.0%
ATTGAGATTTCTGTGCGGTG+AGG - chr3_4:25323197-25323216 None:intergenic 45.0%
GATTTCAGTGGGTGAGTTAG+AGG - chr3_4:25323254-25323273 None:intergenic 45.0%
ACCCAGGATGCAATAACCAT+AGG + chr3_4:25323709-25323728 Msa0495730:intron 45.0%
ACAGGCACTACTGATCAACA+AGG - chr3_4:25323908-25323927 None:intergenic 45.0%
! GTCTAGAGTGACATTGGATG+AGG + chr3_4:25324178-25324197 Msa0495730:intron 45.0%
CGAAACAGACAGGCATACTT+GGG - chr3_4:25324208-25324227 None:intergenic 45.0%
TCGAAACAGACAGGCATACT+TGG - chr3_4:25324209-25324228 None:intergenic 45.0%
AGTATGCCTGTCTGTTTCGA+TGG + chr3_4:25324209-25324228 Msa0495730:intron 45.0%
GTATGCCTGTCTGTTTCGAT+GGG + chr3_4:25324210-25324229 Msa0495730:intron 45.0%
ATACACCCATCGAAACAGAC+AGG - chr3_4:25324218-25324237 None:intergenic 45.0%
TGTCTGTTTCGATGGGTGTA+TGG + chr3_4:25324217-25324236 Msa0495730:intron 45.0%
GTCTGTTTCGATGGGTGTAT+GGG + chr3_4:25324218-25324237 Msa0495730:intron 45.0%
AGGTTGGACGTGCTTTAGTT+CGG + chr3_4:25324932-25324951 Msa0495730:intron 45.0%
!! CTGATACGGGCTGTTTGTTT+TGG + chr3_4:25325021-25325040 Msa0495730:intron 45.0%
!!! GGGCTGTTTGTTTTGGTTTG+TGG + chr3_4:25325028-25325047 Msa0495730:intron 45.0%
!!! TTTGTTTTGGTTTGTGGGGC+TGG + chr3_4:25325034-25325053 Msa0495730:intron 45.0%
!! GGGTTAGCCTCATCAAAATG+GGG + chr3_4:25325067-25325086 Msa0495730:intron 45.0%
!! GGTTAGCCTCATCAAAATGG+GGG + chr3_4:25325068-25325087 Msa0495730:intron 45.0%
! TGAGGTGTTCCGTCTATATG+TGG + chr3_4:25325140-25325159 Msa0495730:intron 45.0%
GAAAACCAAGGGCTATGTCA+AGG - chr3_4:25325562-25325581 None:intergenic 45.0%
GGGGTACATACTTCTATAGG+GGG + chr3_4:25325806-25325825 Msa0495730:intron 45.0%
CATAAGAACTTGGTCCCGAA+TGG + chr3_4:25326865-25326884 Msa0495730:intron 45.0%
!! TTGTAGGGCCATTTTCGGTT+TGG + chr3_4:25327218-25327237 Msa0495730:intron 45.0%
!! TGTAGGGCCATTTTCGGTTT+GGG + chr3_4:25327219-25327238 Msa0495730:intron 45.0%
AGGCAGATTTGTACTTGTGC+AGG + chr3_4:25327289-25327308 Msa0495730:intron 45.0%
! AGAATGAGAGAGGGGTGTAT+AGG + chr3_4:25327503-25327522 Msa0495730:intron 45.0%
!! GAGAAGGTGGAGTTGATGTA+TGG - chr3_4:25327699-25327718 None:intergenic 45.0%
CTCCACCTTCTCTTCTAATC+AGG + chr3_4:25327707-25327726 Msa0495730:five_prime_UTR 45.0%
! TCGGTTTCAGATTGGTGGTT+AGG - chr3_4:25327953-25327972 None:intergenic 45.0%
! TTTTCCACGGGGTTTTCCTT+TGG - chr3_4:25328160-25328179 None:intergenic 45.0%
CTGTTGTCGGAAAGATTCAG+AGG + chr3_4:25328378-25328397 Msa0495730:intron 45.0%
ACCCGGATACAACTCTTGTT+TGG - chr3_4:25328481-25328500 None:intergenic 45.0%
CATGATAAAGGACTTGGGGA+TGG + chr3_4:25328656-25328675 Msa0495730:intron 45.0%
CGTTGAAGTCTCGGAATCAA+GGG - chr3_4:25328857-25328876 None:intergenic 45.0%
CCTTGATTCCGAGACTTCAA+CGG + chr3_4:25328855-25328874 Msa0495730:intron 45.0%
! AGACGGCTAGCTCATTAAGT+TGG + chr3_4:25328894-25328913 Msa0495730:intron 45.0%
GGACAATTAGTGACTTTCCC+GGG + chr3_4:25329314-25329333 Msa0495730:intron 45.0%
TTGAGTGGGTGGAGTACAAA+AGG + chr3_4:25329346-25329365 Msa0495730:intron 45.0%
AGAATTGCAGTGATGGTCCA+TGG + chr3_4:25329602-25329621 Msa0495730:intron 45.0%
GGGACTTTGTTGGATATCAC+GGG + chr3_4:25329730-25329749 Msa0495730:intron 45.0%
CACCCAAAAGAGGTAGATCA+CGG + chr3_4:25329817-25329836 Msa0495730:intron 45.0%
! TGCCGTGATCTACCTCTTTT+GGG - chr3_4:25329822-25329841 None:intergenic 45.0%
! TTGCCGTGATCTACCTCTTT+TGG - chr3_4:25329823-25329842 None:intergenic 45.0%
! ATGTTTGAAGCACACCCATC+TGG - chr3_4:25329931-25329950 None:intergenic 45.0%
GCCGATACATCTAGTGAATG+AGG + chr3_4:25330227-25330246 Msa0495730:intron 45.0%
GTGAATGAGGTAAGAATGGG+AGG + chr3_4:25330240-25330259 Msa0495730:intron 45.0%
TGGGAGGACCTGTTCAATTT+CGG + chr3_4:25330256-25330275 Msa0495730:intron 45.0%
TCGGAATAAAAGTCGTCCTG+AGG + chr3_4:25330326-25330345 Msa0495730:intron 45.0%
CGGAATAAAAGTCGTCCTGA+GGG + chr3_4:25330327-25330346 Msa0495730:intron 45.0%
GCGATGTATCTGACATCCTT+AGG + chr3_4:25330801-25330820 Msa0495730:intron 45.0%
ATCCTTAGGAAGCTATCCAG+AGG + chr3_4:25330815-25330834 Msa0495730:intron 45.0%
AGATTTACTGCATGCTCTGG+AGG - chr3_4:25331274-25331293 None:intergenic 45.0%
ATTTCATCTGACACGAGTGG+AGG - chr3_4:25331367-25331386 None:intergenic 45.0%
AGACCATCATAAGCAGCCAT+CGG + chr3_4:25331844-25331863 Msa0495730:CDS 45.0%
AACCCTTTGTCCGACTCAAT+AGG - chr3_4:25331959-25331978 None:intergenic 45.0%
! GACAAAGGGTTTGTTCACAG+AGG + chr3_4:25331968-25331987 Msa0495730:CDS 45.0%
!! ACCGTGGATCATCAAGTTGA+AGG + chr3_4:25332085-25332104 Msa0495730:CDS 45.0%
GGCAGGACAATACTCTTAAG+AGG + chr3_4:25332272-25332291 Msa0495730:CDS 45.0%
AGGCAAGGAAAATCAACCCT+TGG + chr3_4:25332292-25332311 Msa0495730:CDS 45.0%
GCAAACCAAAGAGTTAAGGC+AGG + chr3_4:25332366-25332385 Msa0495730:CDS 45.0%
GGCAGGACAATACTCTTATG+AGG + chr3_4:25332383-25332402 Msa0495730:CDS 45.0%
GAGGCAAGGAAAATCAACCA+CGG + chr3_4:25332402-25332421 Msa0495730:CDS 45.0%
AGGCAAGGAAAATCAACCAC+GGG + chr3_4:25332403-25332422 Msa0495730:CDS 45.0%
CTACCGTTGATCCTTGAACT+TGG - chr3_4:25332432-25332451 None:intergenic 45.0%
TACTCATCAAGTGCCAAAGC+GGG - chr3_4:25332496-25332515 None:intergenic 45.0%
GAAGGAACAACATGGCATAG+AGG + chr3_4:25332528-25332547 Msa0495730:CDS 45.0%
GAACAACATGGCATAGAGGA+AGG + chr3_4:25332532-25332551 Msa0495730:CDS 45.0%
TGGACCAGATGAAAAGAGAG+TGG + chr3_4:25332889-25332908 Msa0495730:CDS 45.0%
! TCAGCCACTCTCTTTTCATC+TGG - chr3_4:25332896-25332915 None:intergenic 45.0%
! GGAAGGCTTTGGTTAAGTCT+TGG + chr3_4:25332981-25333000 Msa0495730:CDS 45.0%
! AAATCGTCCAGAAGAGGTAC+CGG + chr3_4:25333259-25333278 Msa0495730:CDS 45.0%
CTGAAATGGAGACATCGAAC+GGG + chr3_4:25333452-25333471 Msa0495730:CDS 45.0%
!! AATTTGTTGGTGTCTCGGCA+TGG + chr3_4:25333725-25333744 Msa0495730:intron 45.0%
GGTAGACTCACTATGCATTG+TGG + chr3_4:25333847-25333866 Msa0495730:intron 45.0%
GTATGCGGCAAAGAAAAACC+TGG + chr3_4:25334123-25334142 Msa0495730:CDS 45.0%
GCGTAAGGAAACAGAAGCAA+TGG + chr3_4:25334281-25334300 Msa0495730:CDS 45.0%
ACATTGTTAGCATCAGCTGC+AGG - chr3_4:25334396-25334415 None:intergenic 45.0%
! ATAGAGTTAGTGCGGTGTTG+TGG + chr3_4:25334664-25334683 Msa0495730:intron 45.0%
GTTGTGGTGGCAAATGTTGA+TGG + chr3_4:25334680-25334699 Msa0495730:intron 45.0%
TAGCCCACCTAAATTGGCAT+CGG + chr3_4:25335022-25335041 Msa0495730:three_prime_UTR 45.0%
TCTCCGATGCCAATTTAGGT+GGG - chr3_4:25335028-25335047 None:intergenic 45.0%
CTTCTCTCCGATGCCAATTT+AGG - chr3_4:25335032-25335051 None:intergenic 45.0%
!!! AAATTATCTATTTTTTAAAA+TGG + chr3_4:25326070-25326089 Msa0495730:intron 5.0%
!! AATAAAAAAAAAATCAAATT+TGG + chr3_4:25326721-25326740 Msa0495730:intron 5.0%
ATTTCTGTGCGGTGAGGTTG+AGG - chr3_4:25323191-25323210 None:intergenic 50.0%
!!! TGTGGGGCTGGTTCTGTTTT+TGG + chr3_4:25325046-25325065 Msa0495730:intron 50.0%
!!! GTGGGGCTGGTTCTGTTTTT+GGG + chr3_4:25325047-25325066 Msa0495730:intron 50.0%
AGGGCTGCACTTTCTTTCTG+TGG + chr3_4:25326460-25326479 Msa0495730:intron 50.0%
! AAACGGGCACCGTACAAAGA+TGG - chr3_4:25327249-25327268 None:intergenic 50.0%
GCCCTGATTAGAAGAGAAGG+TGG - chr3_4:25327712-25327731 None:intergenic 50.0%
CGGTTTCGGTTTCAGATTGG+TGG - chr3_4:25327958-25327977 None:intergenic 50.0%
CCGTTGAAGTCTCGGAATCA+AGG - chr3_4:25328858-25328877 None:intergenic 50.0%
! AAGTTGAGGCATCCTGCAGA+TGG + chr3_4:25328944-25328963 Msa0495730:intron 50.0%
CGTGCCTCAACAGCAAATTC+AGG - chr3_4:25329001-25329020 None:intergenic 50.0%
TCCACCTTGGATGTGCATGA+AGG + chr3_4:25329120-25329139 Msa0495730:intron 50.0%
TCAGCCTTCATGCACATCCA+AGG - chr3_4:25329127-25329146 None:intergenic 50.0%
ATTCCTGGACGAAAGTCACC+AGG + chr3_4:25329169-25329188 Msa0495730:intron 50.0%
TTACCTGGTGACTTTCGTCC+AGG - chr3_4:25329175-25329194 None:intergenic 50.0%
ACAAGAGAGCTGCCCTCATT+TGG - chr3_4:25329294-25329313 None:intergenic 50.0%
AAATGAGGGCAGCTCTCTTG+TGG + chr3_4:25329293-25329312 Msa0495730:intron 50.0%
CCACTCAACATAGCATACCC+GGG - chr3_4:25329334-25329353 None:intergenic 50.0%
CCCACTCAACATAGCATACC+CGG - chr3_4:25329335-25329354 None:intergenic 50.0%
CCGGGTATGCTATGTTGAGT+GGG + chr3_4:25329332-25329351 Msa0495730:intron 50.0%
GGTATGCTATGTTGAGTGGG+TGG + chr3_4:25329335-25329354 Msa0495730:intron 50.0%
GAGATGTACAACGTCGAACC+AGG + chr3_4:25330044-25330063 Msa0495730:intron 50.0%
! GAATTAACGGGTGTGCAACC+TGG - chr3_4:25330065-25330084 None:intergenic 50.0%
GAGGACCTGTTCAATTTCGG+TGG + chr3_4:25330259-25330278 Msa0495730:intron 50.0%
TCCTGAGGGTTCTATTGCTG+AGG + chr3_4:25330341-25330360 Msa0495730:intron 50.0%
CCTGAGGGTTCTATTGCTGA+GGG + chr3_4:25330342-25330361 Msa0495730:intron 50.0%
GTCCTCTGGATAGCTTCCTA+AGG - chr3_4:25330820-25330839 None:intergenic 50.0%
TTGCCGATGGCTGCTTATGA+TGG - chr3_4:25331850-25331869 None:intergenic 50.0%
ACCACGGGAAACCAAGTTCA+AGG + chr3_4:25332418-25332437 Msa0495730:CDS 50.0%
TCCTTGAACTTGGTTTCCCG+TGG - chr3_4:25332422-25332441 None:intergenic 50.0%
! AGTGCCAAAGCGGGACATTT+TGG - chr3_4:25332487-25332506 None:intergenic 50.0%
CAACATGGCATAGAGGAAGG+AGG + chr3_4:25332535-25332554 Msa0495730:CDS 50.0%
! GGCTTTGGTTAAGTCTTGGG+AGG + chr3_4:25332985-25333004 Msa0495730:CDS 50.0%
!!! CTCGCGCATGGTTTTGTACT+TGG - chr3_4:25333231-25333250 None:intergenic 50.0%
AGTACAAAACCATGCGCGAG+CGG + chr3_4:25333231-25333250 Msa0495730:CDS 50.0%
!! ATTTTTCAACCGCTCGCGCA+TGG - chr3_4:25333243-25333262 None:intergenic 50.0%
TCTTCTTCCGGTACCTCTTC+TGG - chr3_4:25333269-25333288 None:intergenic 50.0%
TAAAGAGCCTCCCAGTCAAG+CGG + chr3_4:25333610-25333629 Msa0495730:CDS 50.0%
AACATTTCCGCTTGACTGGG+AGG - chr3_4:25333620-25333639 None:intergenic 50.0%
CACTATGCATTGTGGCACTC+TGG + chr3_4:25333855-25333874 Msa0495730:intron 50.0%
GATGGAGGAGAAACAGCGTA+AGG + chr3_4:25334266-25334285 Msa0495730:CDS 50.0%
GAGTCAAAACACCACTGGGT+TGG + chr3_4:25334338-25334357 Msa0495730:CDS 50.0%
! TGGGTTGGATACAGAGGCTT+TGG + chr3_4:25334353-25334372 Msa0495730:CDS 50.0%
CTCTCCGATGCCAATTTAGG+TGG - chr3_4:25335029-25335048 None:intergenic 50.0%
GCCTCATCAAAATGGGGGTG+TGG + chr3_4:25325073-25325092 Msa0495730:intron 55.0%
!! GCCACACCCCCATTTTGATG+AGG - chr3_4:25325077-25325096 None:intergenic 55.0%
GGTGTGGCTGTTGAACTTGC+TGG + chr3_4:25325089-25325108 Msa0495730:intron 55.0%
CCACAAGCAGCAACGCTACA+GGG - chr3_4:25326561-25326580 None:intergenic 55.0%
ACCACAAGCAGCAACGCTAC+AGG - chr3_4:25326562-25326581 None:intergenic 55.0%
GCCATGTTTGTGGTGCTCCA+CGG + chr3_4:25328747-25328766 Msa0495730:intron 55.0%
! ACCGTGGAGCACCACAAACA+TGG - chr3_4:25328751-25328770 None:intergenic 55.0%
ATGTTTGTGGTGCTCCACGG+TGG + chr3_4:25328750-25328769 Msa0495730:intron 55.0%
ATCCTGCAGATGGAGAGGCA+TGG + chr3_4:25328954-25328973 Msa0495730:intron 55.0%
TTCCATGCCTCTCCATCTGC+AGG - chr3_4:25328959-25328978 None:intergenic 55.0%
!! AGACTTGGATTGGCGAGCGA+CGG + chr3_4:25329028-25329047 Msa0495730:intron 55.0%
GCCTTCATGCACATCCAAGG+TGG - chr3_4:25329124-25329143 None:intergenic 55.0%
CCCGGGTATGCTATGTTGAG+TGG + chr3_4:25329331-25329350 Msa0495730:intron 55.0%
CCCTCAGCAATAGAACCCTC+AGG - chr3_4:25330345-25330364 None:intergenic 55.0%
TCGGGGTTGTAGTTCTTCCG+TGG - chr3_4:25334161-25334180 None:intergenic 55.0%
! CACCACTGGGTTGGATACAG+AGG + chr3_4:25334347-25334366 Msa0495730:CDS 55.0%
AGCCTCTGTATCCAACCCAG+TGG - chr3_4:25334352-25334371 None:intergenic 55.0%
!! GAGTTAGTGCGGTGTTGTGG+TGG + chr3_4:25334667-25334686 Msa0495730:intron 55.0%
CAGCAACGCTACAGGGCAGT+AGG - chr3_4:25326554-25326573 None:intergenic 60.0%
! CCCTGTAGCGTTGCTGCTTG+TGG + chr3_4:25326558-25326577 Msa0495730:intron 60.0%
! GAGGCATCCTGCAGATGGAG+AGG + chr3_4:25328949-25328968 Msa0495730:intron 60.0%
! TGTTGGTGTCTCGGCATGGC+TGG + chr3_4:25333729-25333748 Msa0495730:intron 60.0%
CCTGGGAGACTTCGTTGCCA+CGG + chr3_4:25334141-25334160 Msa0495730:CDS 60.0%
CCGTGGCAACGAAGTCTCCC+AGG - chr3_4:25334144-25334163 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 25323154 25335073 25323154 ID=Msa0495730;Name=Msa0495730
chr3_4 mRNA 25323154 25335073 25323154 ID=Msa0495730-mRNA-1;Parent=Msa0495730;Name=Msa0495730-mRNA-1;_AED=0.14;_eAED=0.14;_QI=458|1|1|1|0.66|0.6|10|214|690
chr3_4 exon 25323154 25323424 25323154 ID=Msa0495730-mRNA-1:exon:6109;Parent=Msa0495730-mRNA-1
chr3_4 exon 25324597 25324686 25324597 ID=Msa0495730-mRNA-1:exon:6110;Parent=Msa0495730-mRNA-1
chr3_4 exon 25327676 25327768 25327676 ID=Msa0495730-mRNA-1:exon:6111;Parent=Msa0495730-mRNA-1
chr3_4 exon 25331691 25332658 25331691 ID=Msa0495730-mRNA-1:exon:6112;Parent=Msa0495730-mRNA-1
chr3_4 exon 25332789 25333042 25332789 ID=Msa0495730-mRNA-1:exon:6113;Parent=Msa0495730-mRNA-1
chr3_4 exon 25333128 25333331 25333128 ID=Msa0495730-mRNA-1:exon:6114;Parent=Msa0495730-mRNA-1
chr3_4 exon 25333416 25333508 25333416 ID=Msa0495730-mRNA-1:exon:6115;Parent=Msa0495730-mRNA-1
chr3_4 exon 25333593 25333700 25333593 ID=Msa0495730-mRNA-1:exon:6116;Parent=Msa0495730-mRNA-1
chr3_4 exon 25334063 25334458 25334063 ID=Msa0495730-mRNA-1:exon:6117;Parent=Msa0495730-mRNA-1
chr3_4 exon 25334806 25335073 25334806 ID=Msa0495730-mRNA-1:exon:6118;Parent=Msa0495730-mRNA-1
chr3_4 five_prime_UTR 25323154 25323424 25323154 ID=Msa0495730-mRNA-1:five_prime_utr;Parent=Msa0495730-mRNA-1
chr3_4 five_prime_UTR 25324597 25324686 25324597 ID=Msa0495730-mRNA-1:five_prime_utr;Parent=Msa0495730-mRNA-1
chr3_4 five_prime_UTR 25327676 25327768 25327676 ID=Msa0495730-mRNA-1:five_prime_utr;Parent=Msa0495730-mRNA-1
chr3_4 five_prime_UTR 25331691 25331694 25331691 ID=Msa0495730-mRNA-1:five_prime_utr;Parent=Msa0495730-mRNA-1
chr3_4 CDS 25331695 25332658 25331695 ID=Msa0495730-mRNA-1:cds;Parent=Msa0495730-mRNA-1
chr3_4 CDS 25332789 25333042 25332789 ID=Msa0495730-mRNA-1:cds;Parent=Msa0495730-mRNA-1
chr3_4 CDS 25333128 25333331 25333128 ID=Msa0495730-mRNA-1:cds;Parent=Msa0495730-mRNA-1
chr3_4 CDS 25333416 25333508 25333416 ID=Msa0495730-mRNA-1:cds;Parent=Msa0495730-mRNA-1
chr3_4 CDS 25333593 25333700 25333593 ID=Msa0495730-mRNA-1:cds;Parent=Msa0495730-mRNA-1
chr3_4 CDS 25334063 25334458 25334063 ID=Msa0495730-mRNA-1:cds;Parent=Msa0495730-mRNA-1
chr3_4 CDS 25334806 25334859 25334806 ID=Msa0495730-mRNA-1:cds;Parent=Msa0495730-mRNA-1
chr3_4 three_prime_UTR 25334860 25335073 25334860 ID=Msa0495730-mRNA-1:three_prime_utr;Parent=Msa0495730-mRNA-1
Gene Sequence

>Msa0495730

ATGAAGACGGGTAATGGCTTTCTGTTTGATATACAAGCTAAGTCCAGCAATGAATTATTGCGGAAGATGCATCAAGTCAAAGTTGAAAATGCAAAATCTTCAAAAGAAAGTAGTCATGTAAACATTATTGGTGGAAACATTCAAAAGGTAGACCATCATAAGCAGCCATCGGCAATTAGAAATGTGATTCAAACACAGCTCAAAAAGCAAAACCAACTGAAGCAGTCATTGAATAATATAGTTTCAGCCCAACAAATGAAACCTATTGAGTCGGACAAAGGGTTTGTTCACAGAGGTATTAAGAGGCAATTGGAAGTAGAAGCATCTAAGAAAATTGTTGAGCAGAGGAAAGGGTTTCGTGAGAACAATAATTTTAAGAAATTGAAGTCTACCGTGGATCATCAAGTTGAAGGTCAAACTAAATCACATTCCTCGAAGAATTTTGATGTGCAACACAAAGAGGTAAGGCATGACACTACTCTTAAAAGGCAAGGAAAATCAACCTTTGGAAATCAAGTTAAAGGTTCAACTGAATCATATGCCTCAAAGAAATTTGATGAGAAAAACAAAGAGGTAAGGCAGGACAATACTCTTAAGAGGCAAGGAAAATCAACCCTTGGAAATCAAGTTCAATGTTCAACCGAATCACATGCCTCAAAGAAAATTGATGAGCAAACCAAAGAGTTAAGGCAGGACAATACTCTTATGAGGCAAGGAAAATCAACCACGGGAAACCAAGTTCAAGGATCAACGGTAGATCGACAATCCTGTAAGAACAAAAAATATATTCCAAAATGTCCCGCTTTGGCACTTGATGAGTATATTGAAATGAGGAAGGAACAACATGGCATAGAGGAAGGAGGCGATGAAGATATAGAAAAAAATGAAATGGAAGATGATATGGAGAACAATATCAACTATGAAAGTGACGAAATTGAAAGAGCCGATGAAAATGAAGTTGAAGGATTAATAAGAAAACGAGGAAAGACTTTATGTAAGAATATTCATGCACGAGATTACAAAAATAGACAAGAGATCACGTTGAATGAAGAAGGACAACCGATTGGACCAGATGAAAAGAGAGTGGCTGAACTTAGTAGTTTTTTGGGGACAATAGCAAGAAGTGCAGATTTATGTCCTCTCACCTTCAATAATTGGAAGGCTTTGGTTAAGTCTTGGGAGGATGAAGAAATAGATCCAGTCTGGGAATATGTCAATGAAAAATACATCATCCCAGAGAAAGGAAAGAAGAATGTATTTGCTATTGTAAATGATGCTTGGAGACGATACAAACACTTAATTAAAAAGAATCATTTTACCAAGTACAAAACCATGCGCGAGCGGTTGAAAAATCGTCCAGAAGAGGTACCGGAAGAAGACTTTAAGAAGTTATTGGTGTATTGGAGAGATGAAAACAGTCAAGAAGTCAGTCTGCAAAATGCTCAAAATATTGCTCAACTGAAATGGAGACATCGAACGGGCAATAAAGCCTTTGCTGTTATAAGAGAAAAAATGCGTGTAAGTAATGAAGATAAAGAGCCTCCCAGTCAAGCGGAAATGTTCATTGCTACACGTCAAAGTAAGAAAGGAAAAGAGCTGGATCAAGAAACCAATATTGCAATTACAAAGCTTCAAGACTTAATTGAGAAATATGGGAAGCCTTCTGAAGAAGCCTTTCAAAGTGTATGCGGCAAAGAAAAACCTGGGAGACTTCGTTGCCACGGAAGAACTACAACCCCGACTCTCTTAAAGAGAAATGAAGAAATTGCAAGACTTAGAAGAGAACATAATGATGAGGTAAAACAATTAAAGGATCATATACAAGAGATGGAGGAGAAACAGCGTAAGGAAACAGAAGCAATGGAAGGAAAAATTCAGATTCTTCTTAAGGCCATATTGAGTCAAAACACCACTGGGTTGGATACAGAGGCTTTGGCAGATTTGATAACAACTCCTGCAGCTGATGCTAACAATGTTTTGCATTCTTCTACGTCAACATTTGCTCCAGATGATAATGAGATGAATAATGATGATATCGATGAAGAATTTGAAGATTTGGAAGCACAAGATTAA
Protein sequence

>Msa0495730

MKTGNGFLFDIQAKSSNELLRKMHQVKVENAKSSKESSHVNIIGGNIQKVDHHKQPSAIRNVIQTQLKKQNQLKQSLNNIVSAQQMKPIESDKGFVHRGIKRQLEVEASKKIVEQRKGFRENNNFKKLKSTVDHQVEGQTKSHSSKNFDVQHKEVRHDTTLKRQGKSTFGNQVKGSTESYASKKFDEKNKEVRQDNTLKRQGKSTLGNQVQCSTESHASKKIDEQTKELRQDNTLMRQGKSTTGNQVQGSTVDRQSCKNKKYIPKCPALALDEYIEMRKEQHGIEEGGDEDIEKNEMEDDMENNINYESDEIERADENEVEGLIRKRGKTLCKNIHARDYKNRQEITLNEEGQPIGPDEKRVAELSSFLGTIARSADLCPLTFNNWKALVKSWEDEEIDPVWEYVNEKYIIPEKGKKNVFAIVNDAWRRYKHLIKKNHFTKYKTMRERLKNRPEEVPEEDFKKLLVYWRDENSQEVSLQNAQNIAQLKWRHRTGNKAFAVIREKMRVSNEDKEPPSQAEMFIATRQSKKGKELDQETNIAITKLQDLIEKYGKPSEEAFQSVCGKEKPGRLRCHGRTTTPTLLKRNEEIARLRREHNDEVKQLKDHIQEMEEKQRKETEAMEGKIQILLKAILSQNTTGLDTEALADLITTPAADANNVLHSSTSTFAPDDNEMNNDDIDEEFEDLEAQD*