Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501640 | XP_013459813.1 | 97.071 | 239 | 6 | 1 | 1 | 239 | 1 | 238 | 7.62e-173 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501640 | A0A072UVJ3 | 97.071 | 239 | 6 | 1 | 1 | 239 | 1 | 238 | 3.64e-173 | 487 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0501640 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0361230 | Msa0501640 | 0.985944 | 3.630736e-165 | -8.615850e-47 |
| Msa0501640 | Msa0527450 | 0.870465 | 1.429628e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501640 | MtrunA17_Chr3g0099331 | 97.071 | 239 | 6 | 1 | 1 | 239 | 1 | 238 | 7.01e-177 | 487 |
| Msa0501640 | MtrunA17_Chr4g0057971 | 55.417 | 240 | 105 | 1 | 4 | 241 | 6 | 245 | 2.17e-99 | 291 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501640 | AT5G63280.1 | 55.691 | 246 | 95 | 3 | 30 | 261 | 26 | 271 | 6.71e-98 | 288 |
| Msa0501640 | AT5G40710.1 | 62.245 | 196 | 74 | 0 | 44 | 239 | 44 | 239 | 9.44e-94 | 277 |
| Msa0501640 | AT5G40710.2 | 64.706 | 153 | 54 | 0 | 44 | 196 | 44 | 196 | 2.54e-75 | 229 |
Find 81 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACTCCAATTTACTTAATT+TGG | 0.122652 | 3_4:-42971979 | Msa0501640:intron |
| AATGTTATTGTTCAGAATTC+TGG | 0.162180 | 3_4:-42972397 | Msa0501640:intron |
| TCAACTTAGTAAACAAATTT+AGG | 0.178442 | 3_4:+42968988 | None:intergenic |
| AAGAACAATGAATAAGATTT+TGG | 0.184207 | 3_4:-42973352 | Msa0501640:exon |
| TTGCCACGTGTTAAAAGTTT+TGG | 0.226819 | 3_4:+42973536 | None:intergenic |
| TCATACCAAATTAAGTAAAT+TGG | 0.245660 | 3_4:+42971974 | None:intergenic |
| TGTGACCATGAAATTAATTC+TGG | 0.266563 | 3_4:-42970973 | Msa0501640:CDS |
| AACACGTGGCAAATTCTAAT+AGG | 0.326262 | 3_4:-42973525 | Msa0501640:five_prime_UTR |
| CCTGCAGCGAGCCGGCTTCA+TGG | 0.327309 | 3_4:-42970782 | Msa0501640:intron |
| GTATTTCAGAGGATTGAAAA+AGG | 0.338241 | 3_4:-42969539 | Msa0501640:intron |
| GCTGCAGGACCCTCGTTAAC+TGG | 0.349350 | 3_4:+42970797 | None:intergenic |
| TTGACCCAGAATTAATTTCA+TGG | 0.350995 | 3_4:+42970968 | None:intergenic |
| ATGATTGGATCCACGTTGAT+TGG | 0.368609 | 3_4:-42969078 | Msa0501640:three_prime_UTR |
| AGCCGAATTCATTGTATACT+TGG | 0.373737 | 3_4:-42969264 | Msa0501640:three_prime_UTR |
| TCGTGTTCTTGTTGCTTACA+AGG | 0.379404 | 3_4:-42973311 | Msa0501640:CDS |
| ACAAAATCTAAGCCTGTGTT+TGG | 0.380893 | 3_4:+42969120 | None:intergenic |
| TCAAATTACCCTGCGCCCTC+TGG | 0.382051 | 3_4:+42970612 | None:intergenic |
| CTTCTTGCACAGACTCGGTT+TGG | 0.408494 | 3_4:+42973475 | None:intergenic |
| ACTGTGTCGTGGTTCCATTC+TGG | 0.410661 | 3_4:-42973500 | Msa0501640:five_prime_UTR |
| TTATTTCTTGCTGCAGCAGC+AGG | 0.412858 | 3_4:+42970928 | None:intergenic |
| CACCAAGTATACAATGAATT+CGG | 0.423230 | 3_4:+42969262 | None:intergenic |
| TCTCTATATATATCATTGTC+AGG | 0.427562 | 3_4:+42972107 | None:intergenic |
| ATCCACGGCCACACCACATT+GGG | 0.429683 | 3_4:+42969206 | None:intergenic |
| TGCTATTTGCAAGTGACAGT+TGG | 0.459377 | 3_4:-42969347 | Msa0501640:three_prime_UTR |
| ATTGTTCAGAATTCTGGATC+AGG | 0.460914 | 3_4:-42972391 | Msa0501640:intron |
| CCATGAAGCCGGCTCGCTGC+AGG | 0.478890 | 3_4:+42970782 | None:intergenic |
| GCAGTATTTGACGACATTTG+TGG | 0.483411 | 3_4:-42972171 | Msa0501640:intron |
| GAGAAAGAAGTAGAATAGCT+TGG | 0.485109 | 3_4:-42972335 | Msa0501640:CDS |
| TGTGATGCTCACACCTGCAC+TGG | 0.492800 | 3_4:-42970652 | Msa0501640:CDS |
| GTGACCATGAAATTAATTCT+GGG | 0.499220 | 3_4:-42970972 | Msa0501640:CDS |
| GTCCCAATGTGGTGTGGCCG+TGG | 0.500354 | 3_4:-42969208 | Msa0501640:three_prime_UTR |
| GCTCACACCTGCACTGGACG+TGG | 0.502873 | 3_4:-42970646 | Msa0501640:CDS |
| AATCCACGGCCACACCACAT+TGG | 0.511319 | 3_4:+42969205 | None:intergenic |
| AGGCTTTCCACGTCCAGTGC+AGG | 0.511555 | 3_4:+42970639 | None:intergenic |
| ACAGGTTGAGAGCTTCTAAA+GGG | 0.514372 | 3_4:+42969448 | None:intergenic |
| CTCATATAGATATAAATGAA+TGG | 0.514723 | 3_4:-42972067 | Msa0501640:CDS |
| CAATGATATATATAGAGATC+AGG | 0.516644 | 3_4:-42972102 | Msa0501640:CDS |
| AGATGCTTCTTGCACAGACT+CGG | 0.518860 | 3_4:+42973470 | None:intergenic |
| TATTTGCAAGTGACAGTTGG+AGG | 0.519396 | 3_4:-42969344 | Msa0501640:three_prime_UTR |
| AACAGGTTGAGAGCTTCTAA+AGG | 0.522436 | 3_4:+42969447 | None:intergenic |
| TGTTTGGAACCACGTCGAAA+AGG | 0.523202 | 3_4:+42969136 | None:intergenic |
| ACCCTGCGCCCTCTGGAGAA+AGG | 0.523388 | 3_4:+42970619 | None:intergenic |
| AGCCTTTCTCCAGAGGGCGC+AGG | 0.526816 | 3_4:-42970621 | Msa0501640:CDS |
| ACGAGGGTCCTGCAGCGAGC+CGG | 0.531828 | 3_4:-42970790 | Msa0501640:CDS |
| TTCGACGTGGTTCCAAACAC+AGG | 0.535727 | 3_4:-42969132 | Msa0501640:three_prime_UTR |
| ATTTAGGAAATACACTGTAA+AGG | 0.540362 | 3_4:+42969004 | None:intergenic |
| GAATGATCTAATGATTATGA+TGG | 0.543085 | 3_4:+42969470 | None:intergenic |
| ATAATATCTCAAGAAGGTGC+AGG | 0.547108 | 3_4:-42972136 | Msa0501640:CDS |
| TTATAGCTTTACAAAATCCA+CGG | 0.558228 | 3_4:+42969191 | None:intergenic |
| GAAAGTAACAGTGTATCTGA+TGG | 0.558837 | 3_4:-42969418 | Msa0501640:three_prime_UTR |
| CTGAGGCGTGTCTCACAAGC+CGG | 0.560885 | 3_4:-42969505 | Msa0501640:CDS |
| GCCTTTCTCCAGAGGGCGCA+GGG | 0.563120 | 3_4:-42970620 | Msa0501640:intron |
| TGGAAAACAACTATCAGCTA+TGG | 0.566317 | 3_4:+42970817 | None:intergenic |
| CACATACATCTGCTAAGCAC+CGG | 0.569311 | 3_4:+42971007 | None:intergenic |
| GACTCGGTTTGGTACCAGAA+TGG | 0.569936 | 3_4:+42973486 | None:intergenic |
| TTGCAAGTGACAGTTGGAGG+AGG | 0.570661 | 3_4:-42969341 | Msa0501640:three_prime_UTR |
| CACATTCTCACGTCCCAATG+TGG | 0.582864 | 3_4:-42969219 | Msa0501640:three_prime_UTR |
| CTCTATATATATCATTGTCA+GGG | 0.590660 | 3_4:+42972108 | None:intergenic |
| ATATTGAAATACCATGAAGC+CGG | 0.593494 | 3_4:+42970771 | None:intergenic |
| TTGCAGCATCTGAATCTACA+TGG | 0.597085 | 3_4:+42972824 | None:intergenic |
| CGGTGCTTAGCAGATGTATG+TGG | 0.600256 | 3_4:-42971006 | Msa0501640:CDS |
| AAAGTAACAGTGTATCTGAT+GGG | 0.606879 | 3_4:-42969417 | Msa0501640:three_prime_UTR |
| ATGTAGATTCAGATGCTGCA+AGG | 0.607887 | 3_4:-42972822 | Msa0501640:intron |
| CGTGGAAAGCCTTTCTCCAG+AGG | 0.614403 | 3_4:-42970628 | Msa0501640:CDS |
| ACTTTATTAAACATACAGGT+AGG | 0.615374 | 3_4:+42968934 | None:intergenic |
| AGCTTGGAAGATCGTTCAAG+AGG | 0.626181 | 3_4:-42972319 | Msa0501640:intron |
| TGTGCATGACATCACTAACA+AGG | 0.632332 | 3_4:-42969040 | Msa0501640:three_prime_UTR |
| TCTCACGTCCCAATGTGGTG+TGG | 0.633100 | 3_4:-42969214 | Msa0501640:three_prime_UTR |
| AAGAAATAAGCATATATGTG+AGG | 0.634147 | 3_4:-42970914 | Msa0501640:intron |
| TCTAATAGGCCACTGTGTCG+TGG | 0.642879 | 3_4:-42973511 | Msa0501640:five_prime_UTR |
| GTGGAAAGCCTTTCTCCAGA+GGG | 0.645090 | 3_4:-42970627 | Msa0501640:CDS |
| GCTGAATCCAGAAAGAAAGC+CGG | 0.646951 | 3_4:-42971026 | Msa0501640:intron |
| GATATAAATGAATGGCAGTG+TGG | 0.647971 | 3_4:-42972059 | Msa0501640:CDS |
| AAAAGGAAAATCAAATGCTG+AGG | 0.649523 | 3_4:-42969522 | Msa0501640:CDS |
| TGACAGTTGGAGGAGGAAAG+CGG | 0.652984 | 3_4:-42969334 | Msa0501640:three_prime_UTR |
| CTTACATCATCATCAGTGTG+TGG | 0.677365 | 3_4:+42973276 | None:intergenic |
| GTGCATGACATCACTAACAA+GGG | 0.715616 | 3_4:-42969039 | Msa0501640:three_prime_UTR |
| ATGAAAATAGCCAATCAACG+TGG | 0.731493 | 3_4:+42969068 | None:intergenic |
| TCGAAAAGGCTACTAACATG+CGG | 0.742295 | 3_4:+42969150 | None:intergenic |
| ATTCTGGATCAGGAGCAGAG+TGG | 0.757422 | 3_4:-42972381 | Msa0501640:CDS |
| AGAATGGAACCACGACACAG+TGG | 0.758383 | 3_4:+42973502 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTGGAAATATTAATA+TGG | - | chr3_4:42970647-42970666 | Msa0501640:CDS | 10.0% |
| !!! | ATAATAATTTTAGAAAATAG+AGG | + | chr3_4:42970806-42970825 | None:intergenic | 10.0% |
| !!! | CTATTTTCTAAAATTATTAT+TGG | - | chr3_4:42970806-42970825 | Msa0501640:CDS | 10.0% |
| !!! | AAAATTCTTTTAAAATTTCT+AGG | + | chr3_4:42971238-42971257 | None:intergenic | 10.0% |
| !!! | GAAATTTTAAAAGAATTTTA+AGG | - | chr3_4:42971239-42971258 | Msa0501640:intron | 10.0% |
| !!! | AGAAATTAGAATATAATTTT+AGG | + | chr3_4:42971592-42971611 | None:intergenic | 10.0% |
| !! | TTTAATAATAACTATTGTAA+CGG | - | chr3_4:42972860-42972879 | Msa0501640:intron | 10.0% |
| !!! | TTTCAATCTTTTTTTGTTTT+TGG | - | chr3_4:42969023-42969042 | Msa0501640:three_prime_UTR | 15.0% |
| !!! | AAAATATTTTTACCTTTTCT+TGG | - | chr3_4:42969973-42969992 | Msa0501640:intron | 15.0% |
| !! | AAAAATATAATATCTCAAGA+AGG | - | chr3_4:42970302-42970321 | Msa0501640:intron | 15.0% |
| !!! | TAAAATTGTATTGATTCTAT+TGG | + | chr3_4:42970506-42970525 | None:intergenic | 15.0% |
| !!! | ATTAATATGGTTATTTTATG+AGG | - | chr3_4:42970660-42970679 | Msa0501640:CDS | 15.0% |
| !! | TAAATATCATTGTTTAAACT+AGG | - | chr3_4:42971144-42971163 | Msa0501640:intron | 15.0% |
| !! | CAATAGTTATTATTAAAGTA+TGG | + | chr3_4:42972857-42972876 | None:intergenic | 15.0% |
| !! | AAAAACTTTATTAAACATAC+AGG | + | chr3_4:42973517-42973536 | None:intergenic | 15.0% |
| !!! | ATCTTTTTTTGTTTTTGGTT+CGG | - | chr3_4:42969028-42969047 | Msa0501640:three_prime_UTR | 20.0% |
| !!! | AAGAACAATGAATAAGATTT+TGG | - | chr3_4:42969092-42969111 | Msa0501640:three_prime_UTR | 20.0% |
| !!! | AAATTTGCTGAATTTAATCA+TGG | - | chr3_4:42969284-42969303 | Msa0501640:three_prime_UTR | 20.0% |
| !!! | AATTTGCTGAATTTAATCAT+GGG | - | chr3_4:42969285-42969304 | Msa0501640:three_prime_UTR | 20.0% |
| !!! | ATTTTTGTACTTGAGAAAAA+TGG | - | chr3_4:42969401-42969420 | Msa0501640:three_prime_UTR | 20.0% |
| !!! | TTTTTGTACTTGAGAAAAAT+GGG | - | chr3_4:42969402-42969421 | Msa0501640:three_prime_UTR | 20.0% |
| !! | ACATATAACAATTGAAACAA+AGG | + | chr3_4:42969436-42969455 | None:intergenic | 20.0% |
| !!! | TTATATGTAGATGTTTTCTT+TGG | - | chr3_4:42969448-42969467 | Msa0501640:three_prime_UTR | 20.0% |
| !! | TCAATTTCTTTACTTATTAG+TGG | + | chr3_4:42969869-42969888 | None:intergenic | 20.0% |
| !! | CTCATATAGATATAAATGAA+TGG | - | chr3_4:42970377-42970396 | Msa0501640:intron | 20.0% |
| !! | TCATACCAAATTAAGTAAAT+TGG | + | chr3_4:42970473-42970492 | None:intergenic | 20.0% |
| !! | ATTAACTATATCATGAATGA+TGG | + | chr3_4:42970618-42970637 | None:intergenic | 20.0% |
| !! | TTGCAGAATTTGTATATTTA+TGG | - | chr3_4:42971709-42971728 | Msa0501640:intron | 20.0% |
| !! | TATTAAATGATGTCAAATAG+TGG | - | chr3_4:42971970-42971989 | Msa0501640:intron | 20.0% |
| !!! | TTTCCAGAAATCTTTATTTT+TGG | - | chr3_4:42972131-42972150 | Msa0501640:CDS | 20.0% |
| !!! | ACTGTTTTTATAAGCTATAT+TGG | + | chr3_4:42972396-42972415 | None:intergenic | 20.0% |
| !! | TCTACATGTATTTATATCAA+AGG | - | chr3_4:42972802-42972821 | Msa0501640:intron | 20.0% |
| !! | ACAAAGGAAAAAAAAATGAT+TGG | - | chr3_4:42973351-42973370 | Msa0501640:exon | 20.0% |
| !! | TCAACTTAGTAAACAAATTT+AGG | + | chr3_4:42973459-42973478 | None:intergenic | 20.0% |
| !!! | CAATGAATAAGATTTTGGTT+TGG | - | chr3_4:42969097-42969116 | Msa0501640:three_prime_UTR | 25.0% |
| !!! | TGTAAATACCCATTTTTCTT+TGG | - | chr3_4:42969257-42969276 | Msa0501640:three_prime_UTR | 25.0% |
| ! | ATTTCTCACCAAAGAAAAAT+GGG | + | chr3_4:42969268-42969287 | None:intergenic | 25.0% |
| ! | AATTTCTCACCAAAGAAAAA+TGG | + | chr3_4:42969269-42969288 | None:intergenic | 25.0% |
| !!! | TGTTTTGATTTGCATGAAAT+AGG | - | chr3_4:42969309-42969328 | Msa0501640:three_prime_UTR | 25.0% |
| ! | AAATAGGAGTTGAATTGAAT+TGG | - | chr3_4:42969325-42969344 | Msa0501640:three_prime_UTR | 25.0% |
| !!! | ATGATCTGAATGTTTTTCAA+AGG | - | chr3_4:42969481-42969500 | Msa0501640:exon | 25.0% |
| ! | AGGAGAAAAATGCAAAAATT+TGG | + | chr3_4:42969550-42969569 | None:intergenic | 25.0% |
| ! | TGTAACAAAGAAACAATCAA+AGG | + | chr3_4:42969597-42969616 | None:intergenic | 25.0% |
| !! | TTTGATTGTTTCTTTGTTAC+AGG | - | chr3_4:42969596-42969615 | Msa0501640:intron | 25.0% |
| !! | TTGATTGTTTCTTTGTTACA+GGG | - | chr3_4:42969597-42969616 | Msa0501640:intron | 25.0% |
| ! | GATGATTCTATTATCATCAA+TGG | - | chr3_4:42969735-42969754 | Msa0501640:intron | 25.0% |
| ! | ACTAAAGTAAACAAACACAT+TGG | - | chr3_4:42969821-42969840 | Msa0501640:intron | 25.0% |
| ! | GTTATTGAATGTAGCTATAT+AGG | - | chr3_4:42969891-42969910 | Msa0501640:intron | 25.0% |
| !!! | CTTTTTTCAATTAGAAGTGT+CGG | - | chr3_4:42969947-42969966 | Msa0501640:intron | 25.0% |
| ! | AATGTTATTGTTCAGAATTC+TGG | - | chr3_4:42970047-42970066 | Msa0501640:intron | 25.0% |
| !!! | CATTTGAGTCATTTTATAGT+TGG | + | chr3_4:42970164-42970183 | None:intergenic | 25.0% |
| ! | TATCCAATATTGATGTATGT+CGG | + | chr3_4:42970214-42970233 | None:intergenic | 25.0% |
| ! | CTCTATATATATCATTGTCA+GGG | + | chr3_4:42970339-42970358 | None:intergenic | 25.0% |
| ! | TCTCTATATATATCATTGTC+AGG | + | chr3_4:42970340-42970359 | None:intergenic | 25.0% |
| ! | CAATGATATATATAGAGATC+AGG | - | chr3_4:42970342-42970361 | Msa0501640:intron | 25.0% |
| ! | ACACTCCAATTTACTTAATT+TGG | - | chr3_4:42970465-42970484 | Msa0501640:intron | 25.0% |
| ! | ACTAGTTATTTGATCAACAA+TGG | + | chr3_4:42970538-42970557 | None:intergenic | 25.0% |
| ! | TTGTTGATCAAATAACTAGT+TGG | - | chr3_4:42970538-42970557 | Msa0501640:intron | 25.0% |
| !! | TTGGATTAGATTGAAGTAAT+CGG | - | chr3_4:42970588-42970607 | Msa0501640:intron | 25.0% |
| ! | ATGTTCTTAAATATTAGGCT+TGG | + | chr3_4:42970968-42970987 | None:intergenic | 25.0% |
| ! | CAAGCATGTTCTTAAATATT+AGG | + | chr3_4:42970973-42970992 | None:intergenic | 25.0% |
| ! | TTTAAGGGAAGTAAAATTTC+AGG | + | chr3_4:42971085-42971104 | None:intergenic | 25.0% |
| !! | TTAAACTAGGCTAAGTTTTA+AGG | - | chr3_4:42971157-42971176 | Msa0501640:intron | 25.0% |
| !! | TTAAAATTTCTAGGTCAACA+GGG | + | chr3_4:42971229-42971248 | None:intergenic | 25.0% |
| !! | TTTAAAATTTCTAGGTCAAC+AGG | + | chr3_4:42971230-42971249 | None:intergenic | 25.0% |
| !! | GTTAAACCTTCTGAAAATTT+CGG | - | chr3_4:42971336-42971355 | Msa0501640:intron | 25.0% |
| ! | AAGAAATAAGCATATATGTG+AGG | - | chr3_4:42971530-42971549 | Msa0501640:intron | 25.0% |
| ! | AGAATTCTGTCAAATTGTTA+AGG | + | chr3_4:42971758-42971777 | None:intergenic | 25.0% |
| ! | TTGTTAAATAGATGCTATAG+TGG | - | chr3_4:42971890-42971909 | Msa0501640:intron | 25.0% |
| !! | TAATACCAAAGAGCATATTA+CGG | + | chr3_4:42971955-42971974 | None:intergenic | 25.0% |
| ! | TCACCAAAAATAAAGATTTC+TGG | + | chr3_4:42972137-42972156 | None:intergenic | 25.0% |
| !!! | GAAATCTTTATTTTTGGTGA+AGG | - | chr3_4:42972137-42972156 | Msa0501640:CDS | 25.0% |
| ! | TTGTGTAGATAATACTATGA+TGG | - | chr3_4:42972193-42972212 | Msa0501640:intron | 25.0% |
| ! | AGGATAAACTTGTAAAACAA+TGG | - | chr3_4:42972242-42972261 | Msa0501640:intron | 25.0% |
| ! | TGTAAAACAATGGACATATT+TGG | - | chr3_4:42972252-42972271 | Msa0501640:intron | 25.0% |
| ! | TTGGAGAACTTAATGAAAAT+AGG | + | chr3_4:42972377-42972396 | None:intergenic | 25.0% |
| !!! | ATCCGTTGATAATTGATATT+GGG | + | chr3_4:42972555-42972574 | None:intergenic | 25.0% |
| !!! | AATCCGTTGATAATTGATAT+TGG | + | chr3_4:42972556-42972575 | None:intergenic | 25.0% |
| !!! | GGAATTAAAAAAGTTTGTTG+TGG | + | chr3_4:42972584-42972603 | None:intergenic | 25.0% |
| ! | TGAAATCAAGAGTCATTAAT+TGG | - | chr3_4:42972695-42972714 | Msa0501640:intron | 25.0% |
| !!! | TTTTCACTTTTGTATTTCAG+AGG | - | chr3_4:42972894-42972913 | Msa0501640:intron | 25.0% |
| !!! | GATTATGATGGCTTTTTTTT+CGG | + | chr3_4:42972965-42972984 | None:intergenic | 25.0% |
| ! | GAATGATCTAATGATTATGA+TGG | + | chr3_4:42972977-42972996 | None:intergenic | 25.0% |
| !! | TTATAGCTTTACAAAATCCA+CGG | + | chr3_4:42973256-42973275 | None:intergenic | 25.0% |
| ! | ATTTAGGAAATACACTGTAA+AGG | + | chr3_4:42973443-42973462 | None:intergenic | 25.0% |
| ! | ACTTTATTAAACATACAGGT+AGG | + | chr3_4:42973513-42973532 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTGGTTCGGAAA+TGG | - | chr3_4:42969034-42969053 | Msa0501640:three_prime_UTR | 30.0% |
| ! | TTTTTACAGTCGCGAAAATT+AGG | + | chr3_4:42969570-42969589 | None:intergenic | 30.0% |
| !! | AGTCAGTTTTAATGTCTGAT+TGG | - | chr3_4:42969647-42969666 | Msa0501640:intron | 30.0% |
| !!! | ATGTCTGATTGGAAGTATTT+TGG | - | chr3_4:42969658-42969677 | Msa0501640:intron | 30.0% |
| CAAGCATATAAACCAAGAAA+AGG | + | chr3_4:42969988-42970007 | None:intergenic | 30.0% | |
| TTGATCAAATAACTAGTTGG+TGG | - | chr3_4:42970541-42970560 | Msa0501640:intron | 30.0% | |
| !! | ATAACTAGTTGGTGGAAAAA+CGG | - | chr3_4:42970549-42970568 | Msa0501640:intron | 30.0% |
| CGGAAAAAAAAAAACCAGTT+TGG | - | chr3_4:42970569-42970588 | Msa0501640:intron | 30.0% | |
| TACTTCAATCTAATCCAAAC+TGG | + | chr3_4:42970586-42970605 | None:intergenic | 30.0% | |
| ATTAGATTGAAGTAATCGGA+TGG | - | chr3_4:42970592-42970611 | Msa0501640:intron | 30.0% | |
| !! | TGGTTATTTTATGAGGAACT+TGG | - | chr3_4:42970667-42970686 | Msa0501640:CDS | 30.0% |
| TTAATTACAAGTGTCAGTGT+CGG | + | chr3_4:42970774-42970793 | None:intergenic | 30.0% | |
| ! | ATTGTTTTCATGTTTTGTCC+AGG | + | chr3_4:42971004-42971023 | None:intergenic | 30.0% |
| ! | TACTAACTCACAACTTGTTT+CGG | + | chr3_4:42971031-42971050 | None:intergenic | 30.0% |
| GGAAGTAAAATTTCAGGATT+TGG | + | chr3_4:42971079-42971098 | None:intergenic | 30.0% | |
| GATGATGCTAAATATGAAAG+TGG | + | chr3_4:42971114-42971133 | None:intergenic | 30.0% | |
| AAACTACAGCAATCAAACAA+AGG | + | chr3_4:42971198-42971217 | None:intergenic | 30.0% | |
| ! | TAAAATTTCTAGGTCAACAG+GGG | + | chr3_4:42971228-42971247 | None:intergenic | 30.0% |
| !! | TTTTAAGGATAAACACCTGT+TGG | - | chr3_4:42971254-42971273 | Msa0501640:intron | 30.0% |
| TGTGACCATGAAATTAATTC+TGG | - | chr3_4:42971471-42971490 | Msa0501640:intron | 30.0% | |
| GTGACCATGAAATTAATTCT+GGG | - | chr3_4:42971472-42971491 | Msa0501640:intron | 30.0% | |
| TTGACCCAGAATTAATTTCA+TGG | + | chr3_4:42971479-42971498 | None:intergenic | 30.0% | |
| ATATTGAAATACCATGAAGC+CGG | + | chr3_4:42971676-42971695 | None:intergenic | 30.0% | |
| ACAAGATAACATGTAGAGTT+TGG | + | chr3_4:42972104-42972123 | None:intergenic | 30.0% | |
| ! | GTTTTACAAGTTTATCCTTC+AGG | + | chr3_4:42972240-42972259 | None:intergenic | 30.0% |
| ATAAGTTTCCTGAGACTATT+TGG | - | chr3_4:42972303-42972322 | Msa0501640:intron | 30.0% | |
| TAAGTTTCCTGAGACTATTT+GGG | - | chr3_4:42972304-42972323 | Msa0501640:intron | 30.0% | |
| AATAAGTTGTTTATCCACAC+AGG | - | chr3_4:42972529-42972548 | Msa0501640:intron | 30.0% | |
| TCGATAGGATGTTATACTTA+GGG | - | chr3_4:42972614-42972633 | Msa0501640:intron | 30.0% | |
| CAACAACATCACAAGAAAAA+TGG | + | chr3_4:42972769-42972788 | None:intergenic | 30.0% | |
| ! | CATTTTTCTTGTGATGTTGT+TGG | - | chr3_4:42972767-42972786 | Msa0501640:intron | 30.0% |
| AAGTATGGTTATTACAGAGA+AGG | + | chr3_4:42972842-42972861 | None:intergenic | 30.0% | |
| TACAAAAGTGAAAACCTTGT+TGG | + | chr3_4:42972888-42972907 | None:intergenic | 30.0% | |
| GTATTTCAGAGGATTGAAAA+AGG | - | chr3_4:42972905-42972924 | Msa0501640:intron | 30.0% | |
| AAAAGGAAAATCAAATGCTG+AGG | - | chr3_4:42972922-42972941 | Msa0501640:intron | 30.0% | |
| !! | CTGTTACTTTCTGAAAAAAC+AGG | + | chr3_4:42973017-42973036 | None:intergenic | 30.0% |
| AAAGTAACAGTGTATCTGAT+GGG | - | chr3_4:42973027-42973046 | Msa0501640:intron | 30.0% | |
| ! | TAGCAGAAAAAAGTGTAAAC+TGG | + | chr3_4:42973082-42973101 | None:intergenic | 30.0% |
| !!! | GATAGACATGATTTTCAAGT+TGG | + | chr3_4:42973144-42973163 | None:intergenic | 30.0% |
| CACCAAGTATACAATGAATT+CGG | + | chr3_4:42973185-42973204 | None:intergenic | 30.0% | |
| GTGAAAAAACGTATCTAAAC+AGG | + | chr3_4:42973208-42973227 | None:intergenic | 30.0% | |
| ! | CTTAGATTTTGTGAACACAA+AGG | - | chr3_4:42973335-42973354 | Msa0501640:CDS | 30.0% |
| AACACGTGGCAAATTCTAAT+AGG | - | chr3_4:42968919-42968938 | Msa0501640:three_prime_UTR | 35.0% | |
| ATTGGAGTAGTGTAATGACT+TGG | - | chr3_4:42969343-42969362 | Msa0501640:three_prime_UTR | 35.0% | |
| AATGTAGCTATATAGGTCAG+TGG | - | chr3_4:42969898-42969917 | Msa0501640:intron | 35.0% | |
| ! | CTAATTGAAAAAAGCGTGTC+AGG | + | chr3_4:42969941-42969960 | None:intergenic | 35.0% |
| ATTGTTCAGAATTCTGGATC+AGG | - | chr3_4:42970053-42970072 | Msa0501640:intron | 35.0% | |
| GAGAAAGAAGTAGAATAGCT+TGG | - | chr3_4:42970109-42970128 | Msa0501640:intron | 35.0% | |
| TGACCGACATACATCAATAT+TGG | - | chr3_4:42970208-42970227 | Msa0501640:intron | 35.0% | |
| ! | ATAATATCTCAAGAAGGTGC+AGG | - | chr3_4:42970308-42970327 | Msa0501640:intron | 35.0% |
| GATATAAATGAATGGCAGTG+TGG | - | chr3_4:42970385-42970404 | Msa0501640:intron | 35.0% | |
| ! | TCTAAGCTGATAGTGTATGA+AGG | - | chr3_4:42970707-42970726 | Msa0501640:intron | 35.0% |
| !! | TCAACAATGAAGCATTGACA+CGG | + | chr3_4:42970866-42970885 | None:intergenic | 35.0% |
| TGCTAACTATTTCCTTGAGA+AGG | - | chr3_4:42970910-42970929 | Msa0501640:intron | 35.0% | |
| !! | TGAAAGTGGTGTTGCTTTAA+GGG | + | chr3_4:42971100-42971119 | None:intergenic | 35.0% |
| !! | ATGAAAGTGGTGTTGCTTTA+AGG | + | chr3_4:42971101-42971120 | None:intergenic | 35.0% |
| ! | AAGCTACCGAAATTTTCAGA+AGG | + | chr3_4:42971345-42971364 | None:intergenic | 35.0% |
| CTCTGCTCAATTTATCGTAA+TGG | - | chr3_4:42971366-42971385 | Msa0501640:intron | 35.0% | |
| TGGAAAACAACTATCAGCTA+TGG | + | chr3_4:42971630-42971649 | None:intergenic | 35.0% | |
| !! | TAGTTGTTTTCCAGTTAACG+AGG | - | chr3_4:42971637-42971656 | Msa0501640:intron | 35.0% |
| !! | AGTTGTTTTCCAGTTAACGA+GGG | - | chr3_4:42971638-42971657 | Msa0501640:intron | 35.0% |
| TTGTTCCGTAATATGCTCTT+TGG | - | chr3_4:42971947-42971966 | Msa0501640:intron | 35.0% | |
| AACCTAATTATCTCTCCTGA+AGG | - | chr3_4:42972222-42972241 | Msa0501640:intron | 35.0% | |
| ATCCTTCAGGAGAGATAATT+AGG | + | chr3_4:42972227-42972246 | None:intergenic | 35.0% | |
| GGCCCAATATCAATTATCAA+CGG | - | chr3_4:42972550-42972569 | Msa0501640:intron | 35.0% | |
| ATTCCAGTGATTTAGTCGAT+AGG | - | chr3_4:42972599-42972618 | Msa0501640:intron | 35.0% | |
| GTCGATAGGATGTTATACTT+AGG | - | chr3_4:42972613-42972632 | Msa0501640:intron | 35.0% | |
| GGATACAATTCCTGTGAAAT+TGG | - | chr3_4:42972635-42972654 | Msa0501640:intron | 35.0% | |
| CAACATCACAAGAAAAATGG+AGG | + | chr3_4:42972766-42972785 | None:intergenic | 35.0% | |
| GAAAGTAACAGTGTATCTGA+TGG | - | chr3_4:42973026-42973045 | Msa0501640:intron | 35.0% | |
| !!! | TGATTTTCAAGTTGGCTATG+TGG | + | chr3_4:42973136-42973155 | None:intergenic | 35.0% |
| AGCCGAATTCATTGTATACT+TGG | - | chr3_4:42973180-42973199 | Msa0501640:intron | 35.0% | |
| ACAAAATCTAAGCCTGTGTT+TGG | + | chr3_4:42973327-42973346 | None:intergenic | 35.0% | |
| ATGAAAATAGCCAATCAACG+TGG | + | chr3_4:42973379-42973398 | None:intergenic | 35.0% | |
| ! | TCGTGTTCTTGTTGCTTACA+AGG | - | chr3_4:42969133-42969152 | Msa0501640:three_prime_UTR | 40.0% |
| CTTACATCATCATCAGTGTG+TGG | + | chr3_4:42969171-42969190 | None:intergenic | 40.0% | |
| TTGCAGCATCTGAATCTACA+TGG | + | chr3_4:42969623-42969642 | None:intergenic | 40.0% | |
| ATGTAGATTCAGATGCTGCA+AGG | - | chr3_4:42969622-42969641 | Msa0501640:intron | 40.0% | |
| ! | CTTGTGCTTTTCTTGCTTGT+CGG | - | chr3_4:42970004-42970023 | Msa0501640:intron | 40.0% |
| ! | CTTTTCTTGCTTGTCGGAAT+TGG | - | chr3_4:42970010-42970029 | Msa0501640:intron | 40.0% |
| GCAGTATTTGACGACATTTG+TGG | - | chr3_4:42970273-42970292 | Msa0501640:intron | 40.0% | |
| ! | ATGCCTTCAATCTGAGGTAT+CGG | + | chr3_4:42970734-42970753 | None:intergenic | 40.0% |
| TAACCACAAATCACTCCAAC+AGG | + | chr3_4:42971272-42971291 | None:intergenic | 40.0% | |
| ATGTCAAATAGTGGCTAACG+TGG | - | chr3_4:42971979-42971998 | Msa0501640:intron | 40.0% | |
| TCAAATTCCGCTACACAACA+GGG | + | chr3_4:42972013-42972032 | None:intergenic | 40.0% | |
| TTCAAATTCCGCTACACAAC+AGG | + | chr3_4:42972014-42972033 | None:intergenic | 40.0% | |
| !! | TTGTCATAAGCCGTTTTCAC+AGG | + | chr3_4:42972334-42972353 | None:intergenic | 40.0% |
| TTTGCAGCTTATAGCACAAG+TGG | + | chr3_4:42972511-42972530 | None:intergenic | 40.0% | |
| TAATTGATATTGGGCCTGTG+TGG | + | chr3_4:42972546-42972565 | None:intergenic | 40.0% | |
| ! | CATCCTATCGACTAAATCAC+TGG | + | chr3_4:42972605-42972624 | None:intergenic | 40.0% |
| ACAACTGCAACCAATTTCAC+AGG | + | chr3_4:42972648-42972667 | None:intergenic | 40.0% | |
| !!! | CTGCTTTTTGCTTAGCTGTA+AGG | - | chr3_4:42972671-42972690 | Msa0501640:intron | 40.0% |
| CTATTGTAACGGTTCCAACA+AGG | - | chr3_4:42972871-42972890 | Msa0501640:intron | 40.0% | |
| !!! | ATGATGGCTTTTTTTTCGGC+CGG | + | chr3_4:42972961-42972980 | None:intergenic | 40.0% |
| ! | ACAGGTTGAGAGCTTCTAAA+GGG | + | chr3_4:42972999-42973018 | None:intergenic | 40.0% |
| ! | AACAGGTTGAGAGCTTCTAA+AGG | + | chr3_4:42973000-42973019 | None:intergenic | 40.0% |
| ! | TGCTATTTGCAAGTGACAGT+TGG | - | chr3_4:42973097-42973116 | Msa0501640:intron | 40.0% |
| TATTTGCAAGTGACAGTTGG+AGG | - | chr3_4:42973100-42973119 | Msa0501640:intron | 40.0% | |
| TCGAAAAGGCTACTAACATG+CGG | + | chr3_4:42973297-42973316 | None:intergenic | 40.0% | |
| ATGATTGGATCCACGTTGAT+TGG | - | chr3_4:42973366-42973385 | Msa0501640:exon | 40.0% | |
| TGTGCATGACATCACTAACA+AGG | - | chr3_4:42973404-42973423 | Msa0501640:five_prime_UTR | 40.0% | |
| GTGCATGACATCACTAACAA+GGG | - | chr3_4:42973405-42973424 | Msa0501640:five_prime_UTR | 40.0% | |
| AGATGCTTCTTGCACAGACT+CGG | + | chr3_4:42968977-42968996 | None:intergenic | 45.0% | |
| CTTGCTTGTCGGAATTGGTA+TGG | - | chr3_4:42970015-42970034 | Msa0501640:intron | 45.0% | |
| AGCTTGGAAGATCGTTCAAG+AGG | - | chr3_4:42970125-42970144 | Msa0501640:intron | 45.0% | |
| TCAGACATGCCTTCAATCTG+AGG | + | chr3_4:42970740-42970759 | None:intergenic | 45.0% | |
| AAGGCATGTCTGACATGTGT+CGG | - | chr3_4:42970747-42970766 | Msa0501640:intron | 45.0% | |
| !! | TGAAGCATTGACACGGACAT+TGG | + | chr3_4:42970859-42970878 | None:intergenic | 45.0% |
| !! | TCCTTGAGAAGGTACCATCT+TGG | - | chr3_4:42970921-42970940 | Msa0501640:CDS | 45.0% |
| TCCAAGATGGTACCTTCTCA+AGG | + | chr3_4:42970925-42970944 | None:intergenic | 45.0% | |
| GAGCTCAGAAAAGTCCAAGA+TGG | + | chr3_4:42970938-42970957 | None:intergenic | 45.0% | |
| ACACCTGTTGGAGTGATTTG+TGG | - | chr3_4:42971266-42971285 | Msa0501640:intron | 45.0% | |
| GCTGAATCCAGAAAGAAAGC+CGG | - | chr3_4:42971418-42971437 | Msa0501640:intron | 45.0% | |
| CACATACATCTGCTAAGCAC+CGG | + | chr3_4:42971440-42971459 | None:intergenic | 45.0% | |
| ! | TTATTTCTTGCTGCAGCAGC+AGG | + | chr3_4:42971519-42971538 | None:intergenic | 45.0% |
| GTTATAGCCCTGTTGTGTAG+CGG | - | chr3_4:42972003-42972022 | Msa0501640:CDS | 45.0% | |
| !!! | GTGCTATTTTCTGCGATCTG+TGG | - | chr3_4:42972038-42972057 | Msa0501640:CDS | 45.0% |
| ATCTGTGGTTGACGACACTT+TGG | - | chr3_4:42972053-42972072 | Msa0501640:CDS | 45.0% | |
| TTTGGGAGAGCCTGTGAAAA+CGG | - | chr3_4:42972321-42972340 | Msa0501640:CDS | 45.0% | |
| ! | TGTTAGTAGCCTTTTCGACG+TGG | - | chr3_4:42973299-42973318 | Msa0501640:CDS | 45.0% |
| ! | TGTTTGGAACCACGTCGAAA+AGG | + | chr3_4:42973311-42973330 | None:intergenic | 45.0% |
| !!! | TTAATAAATGTTATATTTTT+TGG | - | chr3_4:42970633-42970652 | Msa0501640:CDS | 5.0% |
| TCTAATAGGCCACTGTGTCG+TGG | - | chr3_4:42968933-42968952 | Msa0501640:three_prime_UTR | 50.0% | |
| AGAATGGAACCACGACACAG+TGG | + | chr3_4:42968945-42968964 | None:intergenic | 50.0% | |
| ACTGTGTCGTGGTTCCATTC+TGG | - | chr3_4:42968944-42968963 | Msa0501640:three_prime_UTR | 50.0% | |
| !! | GACTCGGTTTGGTACCAGAA+TGG | + | chr3_4:42968961-42968980 | None:intergenic | 50.0% |
| ! | CTTCTTGCACAGACTCGGTT+TGG | + | chr3_4:42968972-42968991 | None:intergenic | 50.0% |
| ATTCTGGATCAGGAGCAGAG+TGG | - | chr3_4:42970063-42970082 | Msa0501640:intron | 50.0% | |
| GGACCGATACCTCAGATTGA+AGG | - | chr3_4:42970728-42970747 | Msa0501640:intron | 50.0% | |
| AACATGCTTGAGTCGTGTCC+TGG | - | chr3_4:42970983-42971002 | Msa0501640:CDS | 50.0% | |
| !! | CTAAGCACCGGCTTTCTTTC+TGG | + | chr3_4:42971428-42971447 | None:intergenic | 50.0% |
| CGGTGCTTAGCAGATGTATG+TGG | - | chr3_4:42971438-42971457 | Msa0501640:intron | 50.0% | |
| GTGGAAAGCCTTTCTCCAGA+GGG | - | chr3_4:42971817-42971836 | Msa0501640:intron | 50.0% | |
| AGGCTCTCCCAAATAGTCTC+AGG | + | chr3_4:42972314-42972333 | None:intergenic | 50.0% | |
| TTGCAAGTGACAGTTGGAGG+AGG | - | chr3_4:42973103-42973122 | Msa0501640:intron | 50.0% | |
| TGACAGTTGGAGGAGGAAAG+CGG | - | chr3_4:42973110-42973129 | Msa0501640:intron | 50.0% | |
| CACATTCTCACGTCCCAATG+TGG | - | chr3_4:42973225-42973244 | Msa0501640:intron | 50.0% | |
| TTCGACGTGGTTCCAAACAC+AGG | - | chr3_4:42973312-42973331 | Msa0501640:CDS | 50.0% | |
| TGTGATGCTCACACCTGCAC+TGG | - | chr3_4:42971792-42971811 | Msa0501640:intron | 55.0% | |
| CGTGGAAAGCCTTTCTCCAG+AGG | - | chr3_4:42971816-42971835 | Msa0501640:intron | 55.0% | |
| TCAAATTACCCTGCGCCCTC+TGG | + | chr3_4:42971835-42971854 | None:intergenic | 55.0% | |
| TCTCACGTCCCAATGTGGTG+TGG | - | chr3_4:42973230-42973249 | Msa0501640:intron | 55.0% | |
| ATCCACGGCCACACCACATT+GGG | + | chr3_4:42973241-42973260 | None:intergenic | 55.0% | |
| AATCCACGGCCACACCACAT+TGG | + | chr3_4:42973242-42973261 | None:intergenic | 55.0% | |
| GCTGCAGGACCCTCGTTAAC+TGG | + | chr3_4:42971650-42971669 | None:intergenic | 60.0% | |
| AGGCTTTCCACGTCCAGTGC+AGG | + | chr3_4:42971808-42971827 | None:intergenic | 60.0% | |
| CTGAGGCGTGTCTCACAAGC+CGG | - | chr3_4:42972939-42972958 | Msa0501640:intron | 60.0% | |
| GCTCACACCTGCACTGGACG+TGG | - | chr3_4:42971798-42971817 | Msa0501640:intron | 65.0% | |
| ! | AGCCTTTCTCCAGAGGGCGC+AGG | - | chr3_4:42971823-42971842 | Msa0501640:intron | 65.0% |
| ! | GCCTTTCTCCAGAGGGCGCA+GGG | - | chr3_4:42971824-42971843 | Msa0501640:intron | 65.0% |
| ! | ACCCTGCGCCCTCTGGAGAA+AGG | + | chr3_4:42971828-42971847 | None:intergenic | 65.0% |
| GTCCCAATGTGGTGTGGCCG+TGG | - | chr3_4:42973236-42973255 | Msa0501640:intron | 65.0% | |
| ACGAGGGTCCTGCAGCGAGC+CGG | - | chr3_4:42971654-42971673 | Msa0501640:intron | 70.0% | |
| !! | CCATGAAGCCGGCTCGCTGC+AGG | + | chr3_4:42971665-42971684 | None:intergenic | 70.0% |
| ! | CCTGCAGCGAGCCGGCTTCA+TGG | - | chr3_4:42971662-42971681 | Msa0501640:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 42968909 | 42973557 | 42968909 | ID=Msa0501640;Name=Msa0501640 |
| chr3_4 | mRNA | 42968909 | 42973557 | 42968909 | ID=Msa0501640-mRNA-1;Parent=Msa0501640;Name=Msa0501640-mRNA-1;_AED=0.08;_eAED=0.08;_QI=190|0.87|0.88|1|1|1|9|575|261 |
| chr3_4 | exon | 42968909 | 42969552 | 42968909 | ID=Msa0501640-mRNA-1:exon:9100;Parent=Msa0501640-mRNA-1 |
| chr3_4 | exon | 42969678 | 42969731 | 42969678 | ID=Msa0501640-mRNA-1:exon:9099;Parent=Msa0501640-mRNA-1 |
| chr3_4 | exon | 42970621 | 42970694 | 42970621 | ID=Msa0501640-mRNA-1:exon:9098;Parent=Msa0501640-mRNA-1 |
| chr3_4 | exon | 42970783 | 42970840 | 42970783 | ID=Msa0501640-mRNA-1:exon:9097;Parent=Msa0501640-mRNA-1 |
| chr3_4 | exon | 42970915 | 42971037 | 42970915 | ID=Msa0501640-mRNA-1:exon:9096;Parent=Msa0501640-mRNA-1 |
| chr3_4 | exon | 42971980 | 42972189 | 42971980 | ID=Msa0501640-mRNA-1:exon:9095;Parent=Msa0501640-mRNA-1 |
| chr3_4 | exon | 42972320 | 42972404 | 42972320 | ID=Msa0501640-mRNA-1:exon:9094;Parent=Msa0501640-mRNA-1 |
| chr3_4 | exon | 42972823 | 42972848 | 42972823 | ID=Msa0501640-mRNA-1:exon:9093;Parent=Msa0501640-mRNA-1 |
| chr3_4 | exon | 42973281 | 42973557 | 42973281 | ID=Msa0501640-mRNA-1:exon:9092;Parent=Msa0501640-mRNA-1 |
| chr3_4 | five_prime_UTR | 42973368 | 42973557 | 42973368 | ID=Msa0501640-mRNA-1:five_prime_utr;Parent=Msa0501640-mRNA-1 |
| chr3_4 | CDS | 42973281 | 42973367 | 42973281 | ID=Msa0501640-mRNA-1:cds;Parent=Msa0501640-mRNA-1 |
| chr3_4 | CDS | 42972823 | 42972848 | 42972823 | ID=Msa0501640-mRNA-1:cds;Parent=Msa0501640-mRNA-1 |
| chr3_4 | CDS | 42972320 | 42972404 | 42972320 | ID=Msa0501640-mRNA-1:cds;Parent=Msa0501640-mRNA-1 |
| chr3_4 | CDS | 42971980 | 42972189 | 42971980 | ID=Msa0501640-mRNA-1:cds;Parent=Msa0501640-mRNA-1 |
| chr3_4 | CDS | 42970915 | 42971037 | 42970915 | ID=Msa0501640-mRNA-1:cds;Parent=Msa0501640-mRNA-1 |
| chr3_4 | CDS | 42970783 | 42970840 | 42970783 | ID=Msa0501640-mRNA-1:cds;Parent=Msa0501640-mRNA-1 |
| chr3_4 | CDS | 42970621 | 42970694 | 42970621 | ID=Msa0501640-mRNA-1:cds;Parent=Msa0501640-mRNA-1 |
| chr3_4 | CDS | 42969678 | 42969731 | 42969678 | ID=Msa0501640-mRNA-1:cds;Parent=Msa0501640-mRNA-1 |
| chr3_4 | CDS | 42969484 | 42969552 | 42969484 | ID=Msa0501640-mRNA-1:cds;Parent=Msa0501640-mRNA-1 |
| chr3_4 | three_prime_UTR | 42968909 | 42969483 | 42968909 | ID=Msa0501640-mRNA-1:three_prime_utr;Parent=Msa0501640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
