Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501790 | XP_039687097.1 | 86.898 | 893 | 91 | 6 | 1 | 872 | 1 | 888 | 0.0 | 1506 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501790 | sp|Q9LTS7|C3H65_ARATH | 31.128 | 257 | 124 | 9 | 495 | 707 | 336 | 583 | 9.11e-24 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501790 | A0A396IRN9 | 86.786 | 893 | 91 | 7 | 1 | 872 | 1 | 887 | 0.0 | 1500 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0501790 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0453640 | Msa0501790 | 0.805365 | 1.382451e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501790 | MtrunA17_Chr3g0099651 | 86.786 | 893 | 91 | 7 | 1 | 872 | 1 | 887 | 0.0 | 1500 |
| Msa0501790 | MtrunA17_Chr5g0446991 | 86.771 | 892 | 83 | 8 | 1 | 872 | 1 | 877 | 0.0 | 1457 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501790 | AT5G56930.1 | 31.128 | 257 | 124 | 9 | 495 | 707 | 336 | 583 | 9.26e-25 | 110 |
Find 230 sgRNAs with CRISPR-Local
Find 528 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCATCTAATCTCTTTA+TGG | 0.121630 | 3_4:+43363303 | Msa0501790:CDS |
| TTAGAAGAGGGAGAAATTTC+TGG | 0.169773 | 3_4:+43363133 | Msa0501790:CDS |
| CAAGGCACTTCCTAGCTTAT+TGG | 0.203146 | 3_4:+43367902 | Msa0501790:three_prime_UTR |
| ATTACTGGATTCTACAATTA+TGG | 0.231119 | 3_4:+43363012 | Msa0501790:CDS |
| AGTGAGTGGAACCGAGATTC+TGG | 0.242106 | 3_4:-43360803 | None:intergenic |
| TTGCCTCAGTCAGTCAATTT+TGG | 0.252130 | 3_4:+43367347 | Msa0501790:CDS |
| AAACCCTAAAACAAACAATT+TGG | 0.264278 | 3_4:-43360865 | None:intergenic |
| TATTCTGTTTCTCGCAGTTC+AGG | 0.265437 | 3_4:-43362595 | None:intergenic |
| TTCAGTTTCACTGCTGAATA+AGG | 0.267921 | 3_4:+43367382 | Msa0501790:CDS |
| AGTTTCAGAACATATGAAAT+TGG | 0.281390 | 3_4:+43363207 | Msa0501790:CDS |
| GGAGCCTTTAGACACAAAAT+TGG | 0.289293 | 3_4:-43366529 | None:intergenic |
| GCAGGTAACTTTGAGCAAAT+TGG | 0.292217 | 3_4:+43368356 | Msa0501790:intron |
| GATAGAAGACGGTGGATTAC+TGG | 0.300737 | 3_4:+43362997 | Msa0501790:CDS |
| TCTTCAGAAGGTCTGGTATC+TGG | 0.304297 | 3_4:+43367665 | Msa0501790:CDS |
| GTAAATCACAATTTACATTA+AGG | 0.307548 | 3_4:-43368580 | None:intergenic |
| ATTTATAAATCTAATTCCTT+TGG | 0.310961 | 3_4:-43367096 | None:intergenic |
| TTTAGAATTGAGAATTGTTA+TGG | 0.311159 | 3_4:+43360886 | Msa0501790:exon |
| AGAATAAATTCTCTTAGAAT+TGG | 0.311344 | 3_4:-43367015 | None:intergenic |
| TGTATTTCCTTCAAGGGTAT+TGG | 0.313994 | 3_4:-43362368 | None:intergenic |
| AAACCATCTGTTTGTGTAGA+TGG | 0.328437 | 3_4:-43362497 | None:intergenic |
| ACAGAGATCTAGGTGTTAAA+AGG | 0.338944 | 3_4:+43364776 | Msa0501790:CDS |
| TGATGCAGCAGAATTTCTTA+TGG | 0.341614 | 3_4:+43362463 | Msa0501790:CDS |
| TTTACCATAAAGAGATTAGA+TGG | 0.345594 | 3_4:-43363307 | None:intergenic |
| TGGACAAGATTTCCCTTGTT+TGG | 0.347517 | 3_4:-43367164 | None:intergenic |
| TTTATAAATCTAATTCCTTT+GGG | 0.352802 | 3_4:-43367095 | None:intergenic |
| GGTTGTACCGTGTCTTGTTT+TGG | 0.353400 | 3_4:-43367143 | None:intergenic |
| CTTCAAGGGTATTGGACCCT+TGG | 0.362987 | 3_4:-43362360 | None:intergenic |
| AGCTTGTCCCTTTGTTGATT+CGG | 0.364987 | 3_4:-43362765 | None:intergenic |
| ATCGGTTCAAGAGGTAAATA+AGG | 0.366054 | 3_4:+43367571 | Msa0501790:CDS |
| TGTTCTGGAGGCTGAAACCT+GGG | 0.366097 | 3_4:-43364799 | None:intergenic |
| ACCACTTTGTTCCTTTCTGC+TGG | 0.366420 | 3_4:-43363805 | None:intergenic |
| TTGAAGAGATCATGATCATA+TGG | 0.366562 | 3_4:-43366495 | None:intergenic |
| GTTGTAGAGGTGAACGTTGT+AGG | 0.367146 | 3_4:+43366553 | Msa0501790:CDS |
| TCAAATCACCAAGAGCTTCA+TGG | 0.372430 | 3_4:-43367877 | None:intergenic |
| TTCAAGGGTATTGGACCCTT+GGG | 0.374920 | 3_4:-43362359 | None:intergenic |
| AAGGAGATACCCGTATTAAA+AGG | 0.376901 | 3_4:-43363274 | None:intergenic |
| GGAGTCAACTTTCTTTCTTT+CGG | 0.379336 | 3_4:+43367260 | Msa0501790:CDS |
| TCTGGTTTGCAAGCATTTGT+AGG | 0.381821 | 3_4:-43366906 | None:intergenic |
| CAACAACCCCTCAACGTTCC+TGG | 0.386716 | 3_4:+43361034 | Msa0501790:CDS |
| CTGCTGAATAAGGATGATAA+TGG | 0.386959 | 3_4:+43367392 | Msa0501790:CDS |
| AGAAATGATAGCAAATGAAA+TGG | 0.389830 | 3_4:-43368621 | None:intergenic |
| GGGAAAGGTGGGTGAGAATA+CGG | 0.390618 | 3_4:-43360994 | None:intergenic |
| GAGAGTCATTAAATGGGTTA+TGG | 0.393760 | 3_4:-43360768 | None:intergenic |
| AGTTGAAGCCTGAAAATTAT+CGG | 0.396775 | 3_4:-43367597 | None:intergenic |
| TTGTTCTGGAGGCTGAAACC+TGG | 0.404573 | 3_4:-43364800 | None:intergenic |
| TTTCAAGATAATTGCAATGT+TGG | 0.406632 | 3_4:+43362266 | Msa0501790:intron |
| GGAGAAGGGTGGTGTAAGTA+TGG | 0.407920 | 3_4:-43360973 | None:intergenic |
| AATACGGGTATCTCCTTTCA+AGG | 0.410281 | 3_4:+43363280 | Msa0501790:CDS |
| AGTCTTGCACAAAGGATTCA+TGG | 0.412264 | 3_4:+43363366 | Msa0501790:CDS |
| CTTGTCTCCAACACTTTCAA+TGG | 0.412681 | 3_4:-43362405 | None:intergenic |
| AATTCACCCTCTTGAATAGT+AGG | 0.414409 | 3_4:-43362887 | None:intergenic |
| GACATCATGTATTTCCTTCA+AGG | 0.416233 | 3_4:-43362375 | None:intergenic |
| CGGTAGTGAAGTTGATTTGA+TGG | 0.419784 | 3_4:+43362619 | Msa0501790:CDS |
| CAGATAATTAAGCCATATAT+TGG | 0.421896 | 3_4:-43368541 | None:intergenic |
| GATAATTGCAATGTTGGAAT+GGG | 0.423461 | 3_4:+43362272 | Msa0501790:intron |
| ACAACAAAAGGAAACAGAAT+TGG | 0.424477 | 3_4:+43362832 | Msa0501790:CDS |
| ATTCTGTTTCTCGCAGTTCA+GGG | 0.426340 | 3_4:-43362594 | None:intergenic |
| ACTCCCTTGGGCATGACAGC+TGG | 0.427412 | 3_4:-43367242 | None:intergenic |
| CAAGCGTGGTCCTGGTTCTC+AGG | 0.427999 | 3_4:+43364494 | Msa0501790:CDS |
| TCTGATATTCTGATTGAAGA+AGG | 0.428581 | 3_4:+43363106 | Msa0501790:CDS |
| ACATCTGTCTTCAGAAGGTC+TGG | 0.430319 | 3_4:+43367658 | Msa0501790:CDS |
| GAAATGATAGCAAATGAAAT+GGG | 0.430866 | 3_4:-43368620 | None:intergenic |
| GCAGAAAAGAACAGAGATCT+AGG | 0.434369 | 3_4:+43364766 | Msa0501790:CDS |
| GTCGTGACTCTTGTATGAAA+GGG | 0.434408 | 3_4:+43366463 | Msa0501790:CDS |
| TTGAAGTCTCCTCTTTCGTC+AGG | 0.434521 | 3_4:+43366930 | Msa0501790:CDS |
| AACGGGAGCAAGCGTGGTCC+TGG | 0.435539 | 3_4:+43364486 | Msa0501790:CDS |
| GAAATTAGAGAATCATCAAT+TGG | 0.438251 | 3_4:-43360831 | None:intergenic |
| TTAGTTTCTTATAATTCTGC+AGG | 0.438853 | 3_4:+43368429 | Msa0501790:three_prime_UTR |
| GAAAGAGGAGACTTCAACTC+TGG | 0.441262 | 3_4:-43366924 | None:intergenic |
| CGGGAGTTCATTTGAAAACA+TGG | 0.445788 | 3_4:+43363246 | Msa0501790:CDS |
| AACTTTCTTTCTTTCGGCAA+AGG | 0.445900 | 3_4:+43367266 | Msa0501790:CDS |
| GATGCAGCAGAATTTCTTAT+GGG | 0.447634 | 3_4:+43362464 | Msa0501790:CDS |
| CAAGGGTCCAATACCCTTGA+AGG | 0.451166 | 3_4:+43362361 | Msa0501790:CDS |
| GAAGAAGGAGATTTAGAAGA+GGG | 0.451883 | 3_4:+43363121 | Msa0501790:CDS |
| AAACAATGAAAGACAACAAA+AGG | 0.454560 | 3_4:+43362820 | Msa0501790:CDS |
| AGTTGGAGCTTGTTGTGAAA+GGG | 0.457901 | 3_4:+43362537 | Msa0501790:CDS |
| GGAAGAACAGAGTGATCATA+AGG | 0.458408 | 3_4:+43362916 | Msa0501790:CDS |
| CGTCGTGACTCTTGTATGAA+AGG | 0.459493 | 3_4:+43366462 | Msa0501790:CDS |
| GTGAGTGGAACCGAGATTCT+GGG | 0.459858 | 3_4:-43360802 | None:intergenic |
| TGTGAGAATAGCGCAGTTTG+TGG | 0.460073 | 3_4:-43367446 | None:intergenic |
| CGGGAGCTCGTCTGTAGTAC+AGG | 0.460442 | 3_4:+43363411 | Msa0501790:CDS |
| CAACACTTTCAATGGTCTCA+TGG | 0.464908 | 3_4:-43362397 | None:intergenic |
| GCTCTTGGTGATTTGAATCA+AGG | 0.469125 | 3_4:+43367884 | Msa0501790:three_prime_UTR |
| CATGTTGAACATCTGTGTTC+TGG | 0.470282 | 3_4:+43362656 | Msa0501790:CDS |
| GAAATTCTGCTGCATCATCT+AGG | 0.474076 | 3_4:-43362457 | None:intergenic |
| AGAAAGAAAGTTGACTCCCT+TGG | 0.474127 | 3_4:-43367255 | None:intergenic |
| AGCAGATGGTTGATGCCAAC+GGG | 0.476005 | 3_4:+43364469 | Msa0501790:intron |
| CGGTAAGGAGGGAAAGGCAT+AGG | 0.476506 | 3_4:-43360932 | None:intergenic |
| AGATAATTGCAATGTTGGAA+TGG | 0.478875 | 3_4:+43362271 | Msa0501790:intron |
| TTTGTATTTCCTGACGAAAG+AGG | 0.479190 | 3_4:-43366939 | None:intergenic |
| TCATATGATAATGGACGAGT+TGG | 0.479525 | 3_4:+43362520 | Msa0501790:CDS |
| ACAACGTTCACCTCTACAAC+AGG | 0.479727 | 3_4:-43366550 | None:intergenic |
| AAACGGTGGAAGGGGAAAGG+TGG | 0.480837 | 3_4:-43361006 | None:intergenic |
| AGTGGAACATGTGCAGATAA+AGG | 0.481118 | 3_4:+43367188 | Msa0501790:CDS |
| TCAGTCGTTCTGCCATGGAT+TGG | 0.481190 | 3_4:-43367487 | None:intergenic |
| AAAAGAGAGAGTCATTAAAT+GGG | 0.481956 | 3_4:-43360774 | None:intergenic |
| TTGTAGGCGTAGGTATATCT+TGG | 0.482397 | 3_4:-43366890 | None:intergenic |
| GAAAGAAAGTTGACTCCCTT+GGG | 0.483104 | 3_4:-43367254 | None:intergenic |
| ATTCCTTTGGGTGCTGAGGT+AGG | 0.484739 | 3_4:-43367083 | None:intergenic |
| GAGGTGCAGTCGCAAGTACA+AGG | 0.486328 | 3_4:+43362704 | Msa0501790:CDS |
| GTTTCACATCTGTCTTCAGA+AGG | 0.486768 | 3_4:+43367653 | Msa0501790:CDS |
| ATTAAACTATCATCACAAAC+AGG | 0.487070 | 3_4:-43362569 | None:intergenic |
| AGGCGTAGGTATATCTTGGC+TGG | 0.488376 | 3_4:-43366886 | None:intergenic |
| TAAAACAAACAATTTGGATA+AGG | 0.490092 | 3_4:-43360859 | None:intergenic |
| AAGTCGAATTGAGTGCCCTT+TGG | 0.490972 | 3_4:-43367715 | None:intergenic |
| ATCTAGGTGTTAAAAGGCCC+AGG | 0.491420 | 3_4:+43364782 | Msa0501790:CDS |
| TTGAGTTGAAACGGTGGAAG+GGG | 0.492235 | 3_4:-43361014 | None:intergenic |
| TGTTGAGTTGAAACGGTGGA+AGG | 0.492351 | 3_4:-43361016 | None:intergenic |
| TCACACCAATGTAGAACATA+AGG | 0.494563 | 3_4:+43367037 | Msa0501790:CDS |
| AATTCAATCCATGAAGCTCT+TGG | 0.495408 | 3_4:+43367869 | Msa0501790:three_prime_UTR |
| GGATCACAGCCATTGTAAAT+CGG | 0.496225 | 3_4:+43367553 | Msa0501790:CDS |
| GCTCCCGTGATCTTTGATAG+AGG | 0.497874 | 3_4:-43363395 | None:intergenic |
| TGACAACAAATTTGCAAAGG+TGG | 0.499386 | 3_4:+43368191 | Msa0501790:three_prime_UTR |
| AGCATCAAACTTAGGCCAAA+GGG | 0.503506 | 3_4:+43367700 | Msa0501790:CDS |
| TGATTTCAGTCGTTCTGCCA+TGG | 0.505856 | 3_4:-43367492 | None:intergenic |
| ACTTTCAACTCAGAGTTCTC+AGG | 0.506021 | 3_4:-43362317 | None:intergenic |
| GTAAGTGACTGACAGGTAGA+TGG | 0.512050 | 3_4:-43368220 | None:intergenic |
| CAGCAGATGGTTGATGCCAA+CGG | 0.513664 | 3_4:+43364468 | Msa0501790:intron |
| ATTAAGTTGAAATGACCTAC+TGG | 0.514243 | 3_4:+43367767 | Msa0501790:exon |
| GGTGAGATCGACGGTAAGGA+GGG | 0.516597 | 3_4:-43360943 | None:intergenic |
| TTGAAACGGTGGAAGGGGAA+AGG | 0.519208 | 3_4:-43361009 | None:intergenic |
| AGGAGAAGAAAACTAGAAAG+AGG | 0.520032 | 3_4:+43364514 | Msa0501790:CDS |
| GAGTTGGAGCTTGTTGTGAA+AGG | 0.522400 | 3_4:+43362536 | Msa0501790:CDS |
| GGTAAGGAGGGAAAGGCATA+GGG | 0.522880 | 3_4:-43360931 | None:intergenic |
| TGGAATGGGGCAAGAAAACC+AGG | 0.525766 | 3_4:+43362286 | Msa0501790:CDS |
| AACGGTGGAAGGGGAAAGGT+GGG | 0.526769 | 3_4:-43361005 | None:intergenic |
| GTGGGTGAGAATACGGAGAA+GGG | 0.528000 | 3_4:-43360987 | None:intergenic |
| CATTGAAAGTGTTGGAGACA+AGG | 0.530051 | 3_4:+43362406 | Msa0501790:CDS |
| CATAAACAAGCATCAAACTT+AGG | 0.534817 | 3_4:+43367692 | Msa0501790:CDS |
| TGAAGAGATCATGATCATAT+GGG | 0.534999 | 3_4:-43366494 | None:intergenic |
| GGGGCAAGAAAACCAGGAAA+AGG | 0.535773 | 3_4:+43362292 | Msa0501790:CDS |
| GTTGAGTTGAAACGGTGGAA+GGG | 0.540434 | 3_4:-43361015 | None:intergenic |
| GAAGACAGATGTGAAACAAA+GGG | 0.540909 | 3_4:-43367647 | None:intergenic |
| TTCTGTTTCTCGCAGTTCAG+GGG | 0.542275 | 3_4:-43362593 | None:intergenic |
| TGCTGATGTCAAGGATCCCA+AGG | 0.542510 | 3_4:+43362343 | Msa0501790:CDS |
| CGGAGGTGAGATCGACGGTA+AGG | 0.543173 | 3_4:-43360947 | None:intergenic |
| GAGAACTCTGAGTTGAAAGT+TGG | 0.544375 | 3_4:+43362320 | Msa0501790:CDS |
| GAATGTTGGCATTATATGAA+AGG | 0.545359 | 3_4:+43364838 | Msa0501790:CDS |
| TGAAGAAGGAGATTTAGAAG+AGG | 0.545846 | 3_4:+43363120 | Msa0501790:CDS |
| ATCAATTGGCTTAGAGTGAG+TGG | 0.546809 | 3_4:-43360817 | None:intergenic |
| GAGGGGTTGTTGAGTTGAAA+CGG | 0.546877 | 3_4:-43361023 | None:intergenic |
| GGTGGGTGAGAATACGGAGA+AGG | 0.555718 | 3_4:-43360988 | None:intergenic |
| AGTACACCACTGAATAATCA+TGG | 0.555772 | 3_4:+43366966 | Msa0501790:CDS |
| ACATCATGTATTTCCTTCAA+GGG | 0.556388 | 3_4:-43362374 | None:intergenic |
| CCTCTTGAACCGATTTACAA+TGG | 0.556834 | 3_4:-43367562 | None:intergenic |
| TGGTTATCATCCAATAAGCT+AGG | 0.559109 | 3_4:-43367912 | None:intergenic |
| TTATGACAACAAATTTGCAA+AGG | 0.563416 | 3_4:+43368188 | Msa0501790:three_prime_UTR |
| GGATGTACCAGGAACGTTGA+GGG | 0.564123 | 3_4:-43361041 | None:intergenic |
| GGTGAGAATACGGAGAAGGG+TGG | 0.566031 | 3_4:-43360984 | None:intergenic |
| AACACTGGTTTGTCCTCTAG+CGG | 0.566094 | 3_4:+43362856 | Msa0501790:CDS |
| TCTAATTCCTTTGGGTGCTG+AGG | 0.566303 | 3_4:-43367087 | None:intergenic |
| CGACGGGCATGGTGAACACA+TGG | 0.566879 | 3_4:-43366444 | None:intergenic |
| GGAAACAGAATTGGTAACAC+TGG | 0.567719 | 3_4:+43362841 | Msa0501790:CDS |
| GAGTGTTGATGCCAGCAGAA+AGG | 0.567766 | 3_4:+43363794 | Msa0501790:CDS |
| GATGCCAACGGGAGCAAGCG+TGG | 0.568508 | 3_4:+43364480 | Msa0501790:CDS |
| CAATATCATTCCTTCTGCAG+TGG | 0.568846 | 3_4:-43367321 | None:intergenic |
| TAGCTTATTGGATGATAACC+AGG | 0.568886 | 3_4:+43367914 | Msa0501790:three_prime_UTR |
| TTGCAAGCATTTGTAGGCGT+AGG | 0.572990 | 3_4:-43366900 | None:intergenic |
| ACTAGCAAGAAGCGTAGCTG+AGG | 0.573123 | 3_4:-43367624 | None:intergenic |
| TCTATTCACTCCACTGCAGA+AGG | 0.576435 | 3_4:+43367311 | Msa0501790:CDS |
| CCACTGAATAATCATGGCAC+TGG | 0.577523 | 3_4:+43366972 | Msa0501790:CDS |
| ATCTCTTCCTACTATTCAAG+AGG | 0.577525 | 3_4:+43362880 | Msa0501790:CDS |
| ATCATCTAGGACCATAGCAT+TGG | 0.578913 | 3_4:-43362444 | None:intergenic |
| GAAACCTCTATCAAAGATCA+CGG | 0.581860 | 3_4:+43363391 | Msa0501790:CDS |
| TCAAGAGGGTGAATTTGAGA+AGG | 0.583214 | 3_4:+43362895 | Msa0501790:CDS |
| CTTAATCAACTTGACTCGGA+AGG | 0.583971 | 3_4:+43362731 | Msa0501790:CDS |
| TGAAGACAGATGTGAAACAA+AGG | 0.585226 | 3_4:-43367648 | None:intergenic |
| CATGAGACCATTGAAAGTGT+TGG | 0.585803 | 3_4:+43362398 | Msa0501790:CDS |
| AGACACGGTACAACCAAACA+AGG | 0.587232 | 3_4:+43367151 | Msa0501790:CDS |
| AAGCATCAAACTTAGGCCAA+AGG | 0.587431 | 3_4:+43367699 | Msa0501790:CDS |
| AGGTGAGATCGACGGTAAGG+AGG | 0.587724 | 3_4:-43360944 | None:intergenic |
| TATTCCAGCTGTCATGCCCA+AGG | 0.588364 | 3_4:+43367238 | Msa0501790:CDS |
| TCTGTTTCTCGCAGTTCAGG+GGG | 0.593070 | 3_4:-43362592 | None:intergenic |
| TGTCACCTTATGTTCTACAT+TGG | 0.595277 | 3_4:-43367042 | None:intergenic |
| GGAGAAGAAAACTAGAAAGA+GGG | 0.596213 | 3_4:+43364515 | Msa0501790:CDS |
| ACACTGGTTTGTCCTCTAGC+GGG | 0.597450 | 3_4:+43362857 | Msa0501790:CDS |
| TGATTTGAGTGCCAATGCTA+TGG | 0.597749 | 3_4:+43362433 | Msa0501790:CDS |
| GGGTGGTGTAAGTATGGCTG+CGG | 0.599371 | 3_4:-43360967 | None:intergenic |
| CATGTGTCCGAATCAACAAA+GGG | 0.599461 | 3_4:+43362758 | Msa0501790:CDS |
| ATTAGATGGAAAGCCTTGAA+AGG | 0.601531 | 3_4:-43363293 | None:intergenic |
| ACTTGATGTACTACTAATCA+CGG | 0.602768 | 3_4:-43362795 | None:intergenic |
| CCATTGTAAATCGGTTCAAG+AGG | 0.603158 | 3_4:+43367562 | Msa0501790:CDS |
| TTGGATGAGATTGAGAAACC+CGG | 0.603712 | 3_4:+43363226 | Msa0501790:CDS |
| AGGACCACGCTTGCTCCCGT+TGG | 0.604273 | 3_4:-43364484 | None:intergenic |
| TACAAGAGTCACGACGGGCA+TGG | 0.604335 | 3_4:-43366455 | None:intergenic |
| ATTGAAAGTGTTGGAGACAA+GGG | 0.607556 | 3_4:+43362407 | Msa0501790:CDS |
| TCATGTGTCCGAATCAACAA+AGG | 0.609886 | 3_4:+43362757 | Msa0501790:CDS |
| GATCGACGGTAAGGAGGGAA+AGG | 0.609933 | 3_4:-43360938 | None:intergenic |
| TGGATGAGATTGAGAAACCC+GGG | 0.616226 | 3_4:+43363227 | Msa0501790:CDS |
| GGAGCTTAATCAACTTGACT+CGG | 0.616705 | 3_4:+43362727 | Msa0501790:CDS |
| TTCAGCTGATGATTCTGTGA+GGG | 0.619873 | 3_4:+43367532 | Msa0501790:CDS |
| GAAAGTTGGTGCTGATGTCA+AGG | 0.620891 | 3_4:+43362334 | Msa0501790:CDS |
| TCGTGACTCTTGTATGAAAG+GGG | 0.621109 | 3_4:+43366464 | Msa0501790:CDS |
| TCTAAAGGCTCCTGTTGTAG+AGG | 0.622148 | 3_4:+43366540 | Msa0501790:CDS |
| AAACCTCTATCAAAGATCAC+GGG | 0.623432 | 3_4:+43363392 | Msa0501790:CDS |
| TGGTGTAAGTATGGCTGCGG+AGG | 0.626165 | 3_4:-43360964 | None:intergenic |
| GATGTACCAGGAACGTTGAG+GGG | 0.626758 | 3_4:-43361040 | None:intergenic |
| GCATTTAATATGATAGAAGA+CGG | 0.627470 | 3_4:+43362986 | Msa0501790:CDS |
| AGGTGCAGTCGCAAGTACAA+GGG | 0.632849 | 3_4:+43362705 | Msa0501790:CDS |
| AGGATGTACCAGGAACGTTG+AGG | 0.633592 | 3_4:-43361042 | None:intergenic |
| GTAGGAAGAGATCCCGCTAG+AGG | 0.633801 | 3_4:-43362869 | None:intergenic |
| CACGTCTGAAAGTGTACGTG+AGG | 0.635140 | 3_4:+43362685 | Msa0501790:CDS |
| GAACCATCTACACAAACAGA+TGG | 0.637190 | 3_4:+43362494 | Msa0501790:CDS |
| TGCTTCACCTGTATGATCAG+AGG | 0.639304 | 3_4:+43367790 | Msa0501790:three_prime_UTR |
| ATTCCAGCTGTCATGCCCAA+GGG | 0.640386 | 3_4:+43367239 | Msa0501790:CDS |
| GTTGGAGCTTGTTGTGAAAG+GGG | 0.640588 | 3_4:+43362538 | Msa0501790:CDS |
| AAACCAAAATTGACTGACTG+AGG | 0.641965 | 3_4:-43367350 | None:intergenic |
| CACATTTGATGTGTCTTCTG+CGG | 0.643979 | 3_4:+43363177 | Msa0501790:CDS |
| TTTCATACAAGAGTCACGAC+GGG | 0.644579 | 3_4:-43366460 | None:intergenic |
| TTTAATATGATAGAAGACGG+TGG | 0.661019 | 3_4:+43362989 | Msa0501790:CDS |
| AAGCCTACCTCAGCACCCAA+AGG | 0.664036 | 3_4:+43367080 | Msa0501790:CDS |
| ATAATTGCAATGTTGGAATG+GGG | 0.664245 | 3_4:+43362273 | Msa0501790:CDS |
| GGCTGCGGAGGTGAGATCGA+CGG | 0.667492 | 3_4:-43360952 | None:intergenic |
| GGTGCAGTCGCAAGTACAAG+GGG | 0.669831 | 3_4:+43362706 | Msa0501790:CDS |
| CTTTCATACAAGAGTCACGA+CGG | 0.670545 | 3_4:-43366461 | None:intergenic |
| GATGTTCAACATGTTCTACT+CGG | 0.672226 | 3_4:-43362646 | None:intergenic |
| GCTGATGTCAAGGATCCCAA+GGG | 0.678207 | 3_4:+43362344 | Msa0501790:CDS |
| CCAGTGCCATGATTATTCAG+TGG | 0.679404 | 3_4:-43366972 | None:intergenic |
| GGGTTGTTGAGTTGAAACGG+TGG | 0.681204 | 3_4:-43361020 | None:intergenic |
| GCCAGCAGAAAGGAACAAAG+TGG | 0.681605 | 3_4:+43363804 | Msa0501790:CDS |
| TCTCTTCCTACTATTCAAGA+GGG | 0.684623 | 3_4:+43362881 | Msa0501790:CDS |
| CATACAGGTGAAGCACCAGT+AGG | 0.686596 | 3_4:-43367782 | None:intergenic |
| TAGTACACCAAAACAAGACA+CGG | 0.696951 | 3_4:+43367136 | Msa0501790:CDS |
| ATTCAGCTGATGATTCTGTG+AGG | 0.697116 | 3_4:+43367531 | Msa0501790:CDS |
| GACACGGTACAACCAAACAA+GGG | 0.697668 | 3_4:+43367152 | Msa0501790:CDS |
| AGATAAAGGTCAAAATACTG+CGG | 0.725271 | 3_4:+43367202 | Msa0501790:CDS |
| AACTGCGAGAAACAGAATAG+CGG | 0.734818 | 3_4:+43362599 | Msa0501790:CDS |
| TATCTGCACATGTTCCACTG+TGG | 0.736675 | 3_4:-43367184 | None:intergenic |
| AAGGGAAATCTTGTCCACAG+TGG | 0.738177 | 3_4:+43367170 | Msa0501790:CDS |
| TATGAAAGGAAAATGCCATG+AGG | 0.742938 | 3_4:+43364852 | Msa0501790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAAAAAAAAAATTA+AGG | + | chr3_4:43365679-43365698 | Msa0501790:intron | 0.0% |
| !! | AAAAAAATTAATTGAAGAAA+AGG | - | chr3_4:43361934-43361953 | None:intergenic | 10.0% |
| !! | TCAAAACAAAAATATAAAAA+AGG | + | chr3_4:43361974-43361993 | Msa0501790:intron | 10.0% |
| !! | CAACAAATATATTAAAAAAA+GGG | - | chr3_4:43362043-43362062 | None:intergenic | 10.0% |
| !! | TCAACAAATATATTAAAAAA+AGG | - | chr3_4:43362044-43362063 | None:intergenic | 10.0% |
| !!! | ATTTTTTGTTTTTTTTGTTA+TGG | + | chr3_4:43362146-43362165 | Msa0501790:intron | 10.0% |
| !!! | CATTAAAATTATTACATTTT+TGG | - | chr3_4:43364408-43364427 | None:intergenic | 10.0% |
| !! | ATGAATATTCATTTATATAT+GGG | + | chr3_4:43365418-43365437 | Msa0501790:intron | 10.0% |
| !! | AAAAAAATTACTTGATAAAA+AGG | - | chr3_4:43365665-43365684 | None:intergenic | 10.0% |
| !! | ATCAAAAATCAAAATATAAA+AGG | + | chr3_4:43366286-43366305 | Msa0501790:intron | 10.0% |
| !!! | AATCATTTTTATTGAATGTT+TGG | + | chr3_4:43361252-43361271 | Msa0501790:intron | 15.0% |
| !! | ATTGAAATCAAAAAAGAAAA+GGG | - | chr3_4:43361864-43361883 | None:intergenic | 15.0% |
| !!! | TTTTATATTTTTGTTTTGAC+AGG | - | chr3_4:43361973-43361992 | None:intergenic | 15.0% |
| !! | GTAAAGGTAAATAAAATAAA+AGG | - | chr3_4:43363483-43363502 | None:intergenic | 15.0% |
| !!! | TTTTATTTTCTAATGATGAA+TGG | + | chr3_4:43363545-43363564 | Msa0501790:intron | 15.0% |
| !! | TATTAAAAATTACAAAAGGA+AGG | - | chr3_4:43363589-43363608 | None:intergenic | 15.0% |
| !! | GTTTGGAAAAATTTATTTAA+TGG | + | chr3_4:43363628-43363647 | Msa0501790:intron | 15.0% |
| !! | TACATTATAATAAATGATGT+GGG | - | chr3_4:43364109-43364128 | None:intergenic | 15.0% |
| !! | ATACATTATAATAAATGATG+TGG | - | chr3_4:43364110-43364129 | None:intergenic | 15.0% |
| !! | CATTTATTATAATGTATTGA+AGG | + | chr3_4:43364113-43364132 | Msa0501790:intron | 15.0% |
| !!! | ATAATTGACAAGTTATTTTA+CGG | + | chr3_4:43364336-43364355 | Msa0501790:intron | 15.0% |
| !! | AAAATATATCTACAAGTTTA+GGG | - | chr3_4:43364588-43364607 | None:intergenic | 15.0% |
| !! | CATGAATATTCATTTATATA+TGG | + | chr3_4:43365417-43365436 | Msa0501790:intron | 15.0% |
| !! | TAAACATGAAAAGAATAATA+GGG | - | chr3_4:43366000-43366019 | None:intergenic | 15.0% |
| !! | TTAAACATGAAAAGAATAAT+AGG | - | chr3_4:43366001-43366020 | None:intergenic | 15.0% |
| !!! | ATAAAAAACAAAACTTTTAC+AGG | + | chr3_4:43366335-43366354 | Msa0501790:intron | 15.0% |
| !!! | TAAAAAACAAAACTTTTACA+GGG | + | chr3_4:43366336-43366355 | Msa0501790:intron | 15.0% |
| !! | TTTATAAATCTAATTCCTTT+GGG | - | chr3_4:43367098-43367117 | None:intergenic | 15.0% |
| !! | ATTTATAAATCTAATTCCTT+TGG | - | chr3_4:43367099-43367118 | None:intergenic | 15.0% |
| !!! | GAGCATATTTATTTTAATAT+AGG | + | chr3_4:43368046-43368065 | Msa0501790:intron | 15.0% |
| !!! | GTTAATTGGTTTTAAAATTT+TGG | + | chr3_4:43368288-43368307 | Msa0501790:intron | 15.0% |
| !!! | TCTGATTTCTAAATATTTTT+TGG | + | chr3_4:43368486-43368505 | Msa0501790:three_prime_UTR | 15.0% |
| !!! | CTGATTTCTAAATATTTTTT+GGG | + | chr3_4:43368487-43368506 | Msa0501790:three_prime_UTR | 15.0% |
| !! | TAAAACAAACAATTTGGATA+AGG | - | chr3_4:43360862-43360881 | None:intergenic | 20.0% |
| !!! | TTATCCAAATTGTTTGTTTT+AGG | + | chr3_4:43360861-43360880 | Msa0501790:five_prime_UTR | 20.0% |
| !!! | TATCCAAATTGTTTGTTTTA+GGG | + | chr3_4:43360862-43360881 | Msa0501790:five_prime_UTR | 20.0% |
| !!! | TTTAGAATTGAGAATTGTTA+TGG | + | chr3_4:43360886-43360905 | Msa0501790:exon | 20.0% |
| !! | TTGAAATCAAAAAAGAAAAG+GGG | - | chr3_4:43361863-43361882 | None:intergenic | 20.0% |
| !! | CATTGAAATCAAAAAAGAAA+AGG | - | chr3_4:43361865-43361884 | None:intergenic | 20.0% |
| !! | AATTAATTGAAGAAAAGGAA+AGG | - | chr3_4:43361929-43361948 | None:intergenic | 20.0% |
| !!! | TTGTTGATTGAAAAACAAAA+AGG | + | chr3_4:43362057-43362076 | Msa0501790:intron | 20.0% |
| !! | AGGTAAATAAAATAAAAGGT+AGG | - | chr3_4:43363479-43363498 | None:intergenic | 20.0% |
| !! | TGGAAAAATTTATTTAATGG+CGG | + | chr3_4:43363631-43363650 | Msa0501790:intron | 20.0% |
| !! | TTGAATAGTTGTCTATATTA+TGG | - | chr3_4:43363715-43363734 | None:intergenic | 20.0% |
| !! | TATTCAATGATGTTAAAACT+TGG | + | chr3_4:43363728-43363747 | Msa0501790:intron | 20.0% |
| !! | TAAGAAGAAGAAAAACAAAA+AGG | + | chr3_4:43363836-43363855 | Msa0501790:CDS | 20.0% |
| !! | CCTATATTAATTTCAACAAA+TGG | - | chr3_4:43364065-43364084 | None:intergenic | 20.0% |
| !!! | CCATTTGTTGAAATTAATAT+AGG | + | chr3_4:43364062-43364081 | Msa0501790:intron | 20.0% |
| !! | AAATAAATTGGCAAACTTAA+TGG | - | chr3_4:43364275-43364294 | None:intergenic | 20.0% |
| !!! | ATTATTTTAGAGTTCCATAA+TGG | + | chr3_4:43364379-43364398 | Msa0501790:intron | 20.0% |
| !!! | TTATTTTAGAGTTCCATAAT+GGG | + | chr3_4:43364380-43364399 | Msa0501790:intron | 20.0% |
| !! | CAAAATATATCTACAAGTTT+AGG | - | chr3_4:43364589-43364608 | None:intergenic | 20.0% |
| !! | TAATACGAAAACATAGAAAT+AGG | - | chr3_4:43364688-43364707 | None:intergenic | 20.0% |
| !! | TAAACTTAAAACAAGCATAA+AGG | - | chr3_4:43364935-43364954 | None:intergenic | 20.0% |
| !!! | TAACTTTTTGATTCATAAGA+AGG | + | chr3_4:43365357-43365376 | Msa0501790:intron | 20.0% |
| !!! | TATCTTGTTATTTAAAGTCA+TGG | - | chr3_4:43365453-43365472 | None:intergenic | 20.0% |
| !! | TTTAATTCAAGTCATGAATA+CGG | - | chr3_4:43365516-43365535 | None:intergenic | 20.0% |
| !! | TATATAACTGAAAAAGAAGA+AGG | - | chr3_4:43365549-43365568 | None:intergenic | 20.0% |
| !! | TTGATCAAAATAAATTTGAC+AGG | + | chr3_4:43365899-43365918 | Msa0501790:intron | 20.0% |
| !! | TGATCAAAATAAATTTGACA+GGG | + | chr3_4:43365900-43365919 | Msa0501790:intron | 20.0% |
| !! | TTCATGTTTAAATATGTCTA+TGG | + | chr3_4:43366010-43366029 | Msa0501790:intron | 20.0% |
| !! | AGGATAAAAAACAAATTTAC+CGG | - | chr3_4:43366071-43366090 | None:intergenic | 20.0% |
| !! | AAAAAAGTGGTATATTTACA+AGG | - | chr3_4:43366091-43366110 | None:intergenic | 20.0% |
| !! | TAAAACAAAAAGGAAAAAAG+TGG | - | chr3_4:43366104-43366123 | None:intergenic | 20.0% |
| !! | TTACAGAGATTAAAACAAAA+AGG | - | chr3_4:43366114-43366133 | None:intergenic | 20.0% |
| !!! | TATGCAAAGTATTTGATTTT+AGG | - | chr3_4:43366216-43366235 | None:intergenic | 20.0% |
| !! | TCAAATACTTTGCATATTTA+CGG | + | chr3_4:43366220-43366239 | Msa0501790:intron | 20.0% |
| !!! | TCTTAAAAATTTGTTCATGT+TGG | - | chr3_4:43366254-43366273 | None:intergenic | 20.0% |
| !!! | AAAGAAAGCTTAAATGTTTT+TGG | - | chr3_4:43366363-43366382 | None:intergenic | 20.0% |
| !! | ATTGTATATTTATTCTCTCT+TGG | + | chr3_4:43366830-43366849 | Msa0501790:intron | 20.0% |
| !! | AGAATAAATTCTCTTAGAAT+TGG | - | chr3_4:43367018-43367037 | None:intergenic | 20.0% |
| !!! | TCATGGATTGAATTTTTTTT+AGG | - | chr3_4:43367863-43367882 | None:intergenic | 20.0% |
| !! | GTAAATCACAATTTACATTA+AGG | - | chr3_4:43368583-43368602 | None:intergenic | 20.0% |
| ! | AAAAGAGAGAGTCATTAAAT+GGG | - | chr3_4:43360777-43360796 | None:intergenic | 25.0% |
| ! | AAAAAGAGAGAGTCATTAAA+TGG | - | chr3_4:43360778-43360797 | None:intergenic | 25.0% |
| ! | GAAATTAGAGAATCATCAAT+TGG | - | chr3_4:43360834-43360853 | None:intergenic | 25.0% |
| ! | AAACCCTAAAACAAACAATT+TGG | - | chr3_4:43360868-43360887 | None:intergenic | 25.0% |
| ! | TAAGGAAAATAGGATATGAA+AGG | - | chr3_4:43361065-43361084 | None:intergenic | 25.0% |
| ! | ACAGTAAGAATAAGGAAAAT+AGG | - | chr3_4:43361075-43361094 | None:intergenic | 25.0% |
| !!! | TATTGTTCAACTCACTTTTA+TGG | - | chr3_4:43361359-43361378 | None:intergenic | 25.0% |
| ! | AGTACAAAATGTGTTCAAAA+TGG | + | chr3_4:43361583-43361602 | Msa0501790:intron | 25.0% |
| ! | GTTATAACAATATTGCATAG+CGG | + | chr3_4:43361619-43361638 | Msa0501790:intron | 25.0% |
| !!! | AAAAGGTGTTTTTAAAGCTA+AGG | + | chr3_4:43361991-43362010 | Msa0501790:intron | 25.0% |
| ! | TTTCAAGATAATTGCAATGT+TGG | + | chr3_4:43362266-43362285 | Msa0501790:intron | 25.0% |
| !! | AGATGGTTTTCATATGATAA+TGG | + | chr3_4:43362511-43362530 | Msa0501790:CDS | 25.0% |
| ! | ATTAAACTATCATCACAAAC+AGG | - | chr3_4:43362572-43362591 | None:intergenic | 25.0% |
| ! | AAACAATGAAAGACAACAAA+AGG | + | chr3_4:43362820-43362839 | Msa0501790:CDS | 25.0% |
| ! | GCATTTAATATGATAGAAGA+CGG | + | chr3_4:43362986-43363005 | Msa0501790:CDS | 25.0% |
| ! | ATTACTGGATTCTACAATTA+TGG | + | chr3_4:43363012-43363031 | Msa0501790:CDS | 25.0% |
| !!! | AATTTCTGGAGATTTTTCAA+TGG | + | chr3_4:43363147-43363166 | Msa0501790:CDS | 25.0% |
| ! | AGTTTCAGAACATATGAAAT+TGG | + | chr3_4:43363207-43363226 | Msa0501790:CDS | 25.0% |
| ! | TTTACCATAAAGAGATTAGA+TGG | - | chr3_4:43363310-43363329 | None:intergenic | 25.0% |
| !!! | ACTTGATTTTTGGTTAAAGT+TGG | - | chr3_4:43363349-43363368 | None:intergenic | 25.0% |
| ! | GCATATTGTGCTAAAATAAT+GGG | - | chr3_4:43363448-43363467 | None:intergenic | 25.0% |
| ! | TGCATATTGTGCTAAAATAA+TGG | - | chr3_4:43363449-43363468 | None:intergenic | 25.0% |
| ! | ATTTATCTTCCATTCATCAT+TGG | - | chr3_4:43363526-43363545 | None:intergenic | 25.0% |
| ! | TTTCCAAACAAACTCAAATA+GGG | - | chr3_4:43363617-43363636 | None:intergenic | 25.0% |
| !! | TTTTCCAAACAAACTCAAAT+AGG | - | chr3_4:43363618-43363637 | None:intergenic | 25.0% |
| ! | TATATTATGGAACTCTACAT+AGG | - | chr3_4:43363702-43363721 | None:intergenic | 25.0% |
| !!! | AAGTTCTAAACTTGTGATAT+GGG | + | chr3_4:43363911-43363930 | Msa0501790:intron | 25.0% |
| ! | GATAATGAATCAACTGATAT+TGG | - | chr3_4:43363975-43363994 | None:intergenic | 25.0% |
| ! | TTGAAATAGGGCAAATAAAT+TGG | - | chr3_4:43364287-43364306 | None:intergenic | 25.0% |
| !! | ATTTGCCCTATTTCAATTTT+TGG | + | chr3_4:43364291-43364310 | Msa0501790:intron | 25.0% |
| !! | TTTGCCCTATTTCAATTTTT+GGG | + | chr3_4:43364292-43364311 | Msa0501790:intron | 25.0% |
| !! | AAATAATAGCCTTAAGGATT+TGG | - | chr3_4:43364366-43364385 | None:intergenic | 25.0% |
| !!! | ACTCTAAAATAATAGCCTTA+AGG | - | chr3_4:43364372-43364391 | None:intergenic | 25.0% |
| !!! | TATTTTAGAGTTCCATAATG+GGG | + | chr3_4:43364381-43364400 | Msa0501790:intron | 25.0% |
| ! | TCAAAGGATGTGAAATTAAT+TGG | - | chr3_4:43364615-43364634 | None:intergenic | 25.0% |
| !!! | TTAGTTTTTGGTTTTTGTTC+TGG | - | chr3_4:43364817-43364836 | None:intergenic | 25.0% |
| ! | AACCAAAAACTAAAGAATGT+TGG | + | chr3_4:43364824-43364843 | Msa0501790:CDS | 25.0% |
| ! | ATATAAAGTGAAGAAGAAGT+CGG | - | chr3_4:43364905-43364924 | None:intergenic | 25.0% |
| !! | GTTTCTCTAATAGTTTTTCT+AGG | - | chr3_4:43365169-43365188 | None:intergenic | 25.0% |
| ! | AGATCTAGATATTAATGAGT+TGG | + | chr3_4:43365198-43365217 | Msa0501790:intron | 25.0% |
| !! | TAATGAGTTGGATAGAAATA+TGG | + | chr3_4:43365210-43365229 | Msa0501790:intron | 25.0% |
| !! | TATGGTATTATAGAGCATTA+TGG | + | chr3_4:43365228-43365247 | Msa0501790:intron | 25.0% |
| !! | AAAACCACAAAAATTTTCCA+GGG | - | chr3_4:43365596-43365615 | None:intergenic | 25.0% |
| ! | GATCAAAATAAATTTGACAG+GGG | + | chr3_4:43365901-43365920 | Msa0501790:intron | 25.0% |
| ! | ATCAAAATAAATTTGACAGG+GGG | + | chr3_4:43365902-43365921 | Msa0501790:intron | 25.0% |
| !!! | TTTTAAAAAGACCAATACCA+TGG | - | chr3_4:43365970-43365989 | None:intergenic | 25.0% |
| ! | GGATAAAAAACAAATTTACC+GGG | - | chr3_4:43366070-43366089 | None:intergenic | 25.0% |
| !! | TCTGTAAAATTTGTTCTTGT+TGG | + | chr3_4:43366127-43366146 | Msa0501790:intron | 25.0% |
| ! | AATATCAGACACATATTACA+GGG | - | chr3_4:43366160-43366179 | None:intergenic | 25.0% |
| ! | CAAATACTTTGCATATTTAC+GGG | + | chr3_4:43366221-43366240 | Msa0501790:intron | 25.0% |
| ! | AAGTTTCTGTAAATTTCTCT+TGG | - | chr3_4:43366405-43366424 | None:intergenic | 25.0% |
| ! | TACAACAAGTAAAGTTGAAT+AGG | - | chr3_4:43366600-43366619 | None:intergenic | 25.0% |
| ! | TAATCAATGTTGTCTTATAG+CGG | + | chr3_4:43366649-43366668 | Msa0501790:intron | 25.0% |
| ! | TTTGTACAAATAGTGTATCA+CGG | - | chr3_4:43366722-43366741 | None:intergenic | 25.0% |
| !! | GACTGAAATCAAGATTTTTA+GGG | + | chr3_4:43367504-43367523 | Msa0501790:CDS | 25.0% |
| !! | TTATGTTTCTATTTCTCTCA+CGG | + | chr3_4:43367956-43367975 | Msa0501790:intron | 25.0% |
| ! | CTAAAATAACAATTGAACCA+AGG | - | chr3_4:43368027-43368046 | None:intergenic | 25.0% |
| ! | TTATGACAACAAATTTGCAA+AGG | + | chr3_4:43368188-43368207 | Msa0501790:three_prime_UTR | 25.0% |
| ! | TTAGTTTCTTATAATTCTGC+AGG | + | chr3_4:43368429-43368448 | Msa0501790:three_prime_UTR | 25.0% |
| !!! | ATATTTTTTGGGAGAATTTC+TGG | + | chr3_4:43368498-43368517 | Msa0501790:three_prime_UTR | 25.0% |
| ! | CTGGAAAAAAAAAAAAAGCT+TGG | + | chr3_4:43368517-43368536 | Msa0501790:three_prime_UTR | 25.0% |
| ! | CAGATAATTAAGCCATATAT+TGG | - | chr3_4:43368544-43368563 | None:intergenic | 25.0% |
| ! | GAAATGATAGCAAATGAAAT+GGG | - | chr3_4:43368623-43368642 | None:intergenic | 25.0% |
| ! | AGAAATGATAGCAAATGAAA+TGG | - | chr3_4:43368624-43368643 | None:intergenic | 25.0% |
| AAGCAACAACAGTAAGAATA+AGG | - | chr3_4:43361083-43361102 | None:intergenic | 30.0% | |
| AATTTCTATTAGTAGCCTAG+TGG | - | chr3_4:43361180-43361199 | None:intergenic | 30.0% | |
| GAAATTGAGAGAGAAAAAGA+AGG | + | chr3_4:43361194-43361213 | Msa0501790:intron | 30.0% | |
| !!! | AATTTTGGTTGTTCCAAACA+CGG | + | chr3_4:43361515-43361534 | Msa0501790:intron | 30.0% |
| TACTAAATAGCATGTATCAC+CGG | - | chr3_4:43361567-43361586 | None:intergenic | 30.0% | |
| ACAAAATGTGTTCAAAATGG+CGG | + | chr3_4:43361586-43361605 | Msa0501790:intron | 30.0% | |
| TACAAGGTTAACACATTGTT+TGG | + | chr3_4:43361740-43361759 | Msa0501790:intron | 30.0% | |
| TGTGCGATATTACTCTATTA+AGG | + | chr3_4:43361768-43361787 | Msa0501790:intron | 30.0% | |
| GTGCGATATTACTCTATTAA+GGG | + | chr3_4:43361769-43361788 | Msa0501790:intron | 30.0% | |
| !!! | TGTTTTTAAAGCTAAGGTTG+TGG | + | chr3_4:43361997-43362016 | Msa0501790:intron | 30.0% |
| ! | CTTTTTGTGAAATTTCCTGT+TGG | + | chr3_4:43362106-43362125 | Msa0501790:intron | 30.0% |
| GCTTTAATTCAAAATCCAAC+AGG | - | chr3_4:43362124-43362143 | None:intergenic | 30.0% | |
| TTATGGATCAAACTGATGAT+AGG | + | chr3_4:43362163-43362182 | Msa0501790:intron | 30.0% | |
| CATTGCAATTATCTTGAAAG+AGG | - | chr3_4:43362265-43362284 | None:intergenic | 30.0% | |
| AGATAATTGCAATGTTGGAA+TGG | + | chr3_4:43362271-43362290 | Msa0501790:intron | 30.0% | |
| GATAATTGCAATGTTGGAAT+GGG | + | chr3_4:43362272-43362291 | Msa0501790:intron | 30.0% | |
| ATAATTGCAATGTTGGAATG+GGG | + | chr3_4:43362273-43362292 | Msa0501790:CDS | 30.0% | |
| ACATCATGTATTTCCTTCAA+GGG | - | chr3_4:43362377-43362396 | None:intergenic | 30.0% | |
| ACTTGATGTACTACTAATCA+CGG | - | chr3_4:43362798-43362817 | None:intergenic | 30.0% | |
| ACAACAAAAGGAAACAGAAT+TGG | + | chr3_4:43362832-43362851 | Msa0501790:CDS | 30.0% | |
| TTTAATATGATAGAAGACGG+TGG | + | chr3_4:43362989-43363008 | Msa0501790:CDS | 30.0% | |
| TCTGATATTCTGATTGAAGA+AGG | + | chr3_4:43363106-43363125 | Msa0501790:CDS | 30.0% | |
| ! | CATGGTTTCTCCTTTTAATA+CGG | + | chr3_4:43363264-43363283 | Msa0501790:CDS | 30.0% |
| ! | ATGGTTTCTCCTTTTAATAC+GGG | + | chr3_4:43363265-43363284 | Msa0501790:CDS | 30.0% |
| CTTTCCATCTAATCTCTTTA+TGG | + | chr3_4:43363303-43363322 | Msa0501790:CDS | 30.0% | |
| ! | TTTGTGCAAGACTTGATTTT+TGG | - | chr3_4:43363359-43363378 | None:intergenic | 30.0% |
| AAAAATCAAGTCTTGCACAA+AGG | + | chr3_4:43363358-43363377 | Msa0501790:CDS | 30.0% | |
| GAGCACAAAACATAATGTAA+AGG | - | chr3_4:43363499-43363518 | None:intergenic | 30.0% | |
| TTATCATCAACCATATCCTT+CGG | + | chr3_4:43363673-43363692 | Msa0501790:intron | 30.0% | |
| ! | TTTTTCTTCTTCTTAGCATC+AGG | - | chr3_4:43363831-43363850 | None:intergenic | 30.0% |
| AGGTGTTCTTCTTATATTGT+TGG | + | chr3_4:43363856-43363875 | Msa0501790:intron | 30.0% | |
| !! | GAAGTTCTAAACTTGTGATA+TGG | + | chr3_4:43363910-43363929 | Msa0501790:intron | 30.0% |
| TAGGTTCTACATTGTTTATG+TGG | + | chr3_4:43364081-43364100 | Msa0501790:intron | 30.0% | |
| AGGTTCTACATTGTTTATGT+GGG | + | chr3_4:43364082-43364101 | Msa0501790:intron | 30.0% | |
| AACTGTCTAACTGTATTAAC+TGG | + | chr3_4:43364210-43364229 | Msa0501790:intron | 30.0% | |
| TTCGCCCAAAAATTGAAATA+GGG | - | chr3_4:43364299-43364318 | None:intergenic | 30.0% | |
| TTTCGCCCAAAAATTGAAAT+AGG | - | chr3_4:43364300-43364319 | None:intergenic | 30.0% | |
| !!! | TGCCAACATTCTTTAGTTTT+TGG | - | chr3_4:43364829-43364848 | None:intergenic | 30.0% |
| GAATGTTGGCATTATATGAA+AGG | + | chr3_4:43364838-43364857 | Msa0501790:CDS | 30.0% | |
| TTGAGTTTATAACAACCTCA+TGG | - | chr3_4:43364870-43364889 | None:intergenic | 30.0% | |
| TATAAAGTGAAGAAGAAGTC+GGG | - | chr3_4:43364904-43364923 | None:intergenic | 30.0% | |
| CATTATACTGTTACACTAGA+CGG | + | chr3_4:43364969-43364988 | Msa0501790:intron | 30.0% | |
| ATTATACTGTTACACTAGAC+GGG | + | chr3_4:43364970-43364989 | Msa0501790:intron | 30.0% | |
| ATTTGAATTTATCTGAACCC+TGG | + | chr3_4:43365576-43365595 | Msa0501790:intron | 30.0% | |
| ! | CAAAACCACAAAAATTTTCC+AGG | - | chr3_4:43365597-43365616 | None:intergenic | 30.0% |
| !! | GGAAAATTTTTGTGGTTTTG+TGG | + | chr3_4:43365597-43365616 | Msa0501790:intron | 30.0% |
| TATTCCTTTAACAAAGTCCA+TGG | + | chr3_4:43365950-43365969 | Msa0501790:intron | 30.0% | |
| AATACCATGGACTTTGTTAA+AGG | - | chr3_4:43365957-43365976 | None:intergenic | 30.0% | |
| TTTAACAAAGTCCATGGTAT+TGG | + | chr3_4:43365956-43365975 | Msa0501790:intron | 30.0% | |
| GAATATCAGACACATATTAC+AGG | - | chr3_4:43366161-43366180 | None:intergenic | 30.0% | |
| CTTATGTTGTCTGTATTAGA+GGG | + | chr3_4:43366190-43366209 | Msa0501790:intron | 30.0% | |
| TGAAGAGATCATGATCATAT+GGG | - | chr3_4:43366497-43366516 | None:intergenic | 30.0% | |
| TTGAAGAGATCATGATCATA+TGG | - | chr3_4:43366498-43366517 | None:intergenic | 30.0% | |
| ! | TGTTCCAATTTTGTGTCTAA+AGG | + | chr3_4:43366525-43366544 | Msa0501790:CDS | 30.0% |
| GTTGTTAAATAGTAGCATAG+TGG | + | chr3_4:43366744-43366763 | Msa0501790:intron | 30.0% | |
| ATTGACAACACTGTAAATGA+CGG | + | chr3_4:43366801-43366820 | Msa0501790:intron | 30.0% | |
| AAATGAGCTCTTTCTCATTT+AGG | + | chr3_4:43366857-43366876 | Msa0501790:intron | 30.0% | |
| !! | TAGAATTGGAGTTGTTTTGT+TGG | - | chr3_4:43367004-43367023 | None:intergenic | 30.0% |
| AGATAAAGGTCAAAATACTG+CGG | + | chr3_4:43367202-43367221 | Msa0501790:CDS | 30.0% | |
| ! | CGACTGAAATCAAGATTTTT+AGG | + | chr3_4:43367503-43367522 | Msa0501790:CDS | 30.0% |
| AGTTGAAGCCTGAAAATTAT+CGG | - | chr3_4:43367600-43367619 | None:intergenic | 30.0% | |
| CATAAACAAGCATCAAACTT+AGG | + | chr3_4:43367692-43367711 | Msa0501790:CDS | 30.0% | |
| !! | ATTAAGTTGAAATGACCTAC+TGG | + | chr3_4:43367767-43367786 | Msa0501790:exon | 30.0% |
| ! | TTATTTTCCTCTGATCATAC+AGG | - | chr3_4:43367800-43367819 | None:intergenic | 30.0% |
| ATTGCTAATACGTAAATCCT+TGG | + | chr3_4:43368007-43368026 | Msa0501790:intron | 30.0% | |
| ! | GTTATGAAGAGCATAACAAA+AGG | - | chr3_4:43368090-43368109 | None:intergenic | 30.0% |
| TTGTTATGCTCTTCATAACT+CGG | + | chr3_4:43368091-43368110 | Msa0501790:intron | 30.0% | |
| !!! | AAATGACTTGAGTTTTGAAG+TGG | + | chr3_4:43368266-43368285 | Msa0501790:intron | 30.0% |
| !!! | TGAGTTTTGAAGTGGTTAAT+TGG | + | chr3_4:43368274-43368293 | Msa0501790:intron | 30.0% |
| ATGCATGTACCTATTAAACT+TGG | + | chr3_4:43368318-43368337 | Msa0501790:intron | 30.0% | |
| AAAAAGCTTGGACCAATATA+TGG | + | chr3_4:43368529-43368548 | Msa0501790:three_prime_UTR | 30.0% | |
| !! | GAGAGTCATTAAATGGGTTA+TGG | - | chr3_4:43360771-43360790 | None:intergenic | 35.0% |
| !!! | CTTTTTCAAACCCAGAATCT+CGG | + | chr3_4:43360792-43360811 | Msa0501790:five_prime_UTR | 35.0% |
| CACAACAGTAGTAAAACAAG+AGG | - | chr3_4:43361115-43361134 | None:intergenic | 35.0% | |
| ATGGTGAATATACAACGACA+CGG | - | chr3_4:43361140-43361159 | None:intergenic | 35.0% | |
| TGTCGTTGTATATTCACCAT+AGG | + | chr3_4:43361140-43361159 | Msa0501790:intron | 35.0% | |
| !! | GTAGCTTTTGAGTCTAAATG+TGG | - | chr3_4:43361398-43361417 | None:intergenic | 35.0% |
| AAAGCTACAAATTCTAGCCT+CGG | + | chr3_4:43361410-43361429 | Msa0501790:intron | 35.0% | |
| ! | TACACCTCAAGAGTCAATTT+TGG | + | chr3_4:43361500-43361519 | Msa0501790:intron | 35.0% |
| ! | ACAACCAAAATTGACTCTTG+AGG | - | chr3_4:43361507-43361526 | None:intergenic | 35.0% |
| CACAGTTAGTTATACGAACA+TGG | + | chr3_4:43361676-43361695 | Msa0501790:intron | 35.0% | |
| !! | TATACGAACATGGTCTTGTT+TGG | + | chr3_4:43361686-43361705 | Msa0501790:intron | 35.0% |
| ! | TGTATTTCCTTCAAGGGTAT+TGG | - | chr3_4:43362371-43362390 | None:intergenic | 35.0% |
| GACATCATGTATTTCCTTCA+AGG | - | chr3_4:43362378-43362397 | None:intergenic | 35.0% | |
| !! | ATTGAAAGTGTTGGAGACAA+GGG | + | chr3_4:43362407-43362426 | Msa0501790:CDS | 35.0% |
| TGATGCAGCAGAATTTCTTA+TGG | + | chr3_4:43362463-43362482 | Msa0501790:CDS | 35.0% | |
| GATGCAGCAGAATTTCTTAT+GGG | + | chr3_4:43362464-43362483 | Msa0501790:CDS | 35.0% | |
| AAACCATCTGTTTGTGTAGA+TGG | - | chr3_4:43362500-43362519 | None:intergenic | 35.0% | |
| !! | TCATATGATAATGGACGAGT+TGG | + | chr3_4:43362520-43362539 | Msa0501790:CDS | 35.0% |
| GATGTTCAACATGTTCTACT+CGG | - | chr3_4:43362649-43362668 | None:intergenic | 35.0% | |
| ATCTCTTCCTACTATTCAAG+AGG | + | chr3_4:43362880-43362899 | Msa0501790:CDS | 35.0% | |
| TCTCTTCCTACTATTCAAGA+GGG | + | chr3_4:43362881-43362900 | Msa0501790:CDS | 35.0% | |
| AATTCACCCTCTTGAATAGT+AGG | - | chr3_4:43362890-43362909 | None:intergenic | 35.0% | |
| TGAAGAAGGAGATTTAGAAG+AGG | + | chr3_4:43363120-43363139 | Msa0501790:CDS | 35.0% | |
| GAAGAAGGAGATTTAGAAGA+GGG | + | chr3_4:43363121-43363140 | Msa0501790:CDS | 35.0% | |
| TTAGAAGAGGGAGAAATTTC+TGG | + | chr3_4:43363133-43363152 | Msa0501790:CDS | 35.0% | |
| !! | TCTGGAGATTTTTCAATGGA+TGG | + | chr3_4:43363151-43363170 | Msa0501790:CDS | 35.0% |
| ! | ATGTTTTCAAATGAACTCCC+GGG | - | chr3_4:43363247-43363266 | None:intergenic | 35.0% |
| ! | CATGTTTTCAAATGAACTCC+CGG | - | chr3_4:43363248-43363267 | None:intergenic | 35.0% |
| AAGGAGATACCCGTATTAAA+AGG | - | chr3_4:43363277-43363296 | None:intergenic | 35.0% | |
| ATTAGATGGAAAGCCTTGAA+AGG | - | chr3_4:43363296-43363315 | None:intergenic | 35.0% | |
| GAAACCTCTATCAAAGATCA+CGG | + | chr3_4:43363391-43363410 | Msa0501790:CDS | 35.0% | |
| AAACCTCTATCAAAGATCAC+GGG | + | chr3_4:43363392-43363411 | Msa0501790:CDS | 35.0% | |
| ! | TTGCCCTATTTGAGTTTGTT+TGG | + | chr3_4:43363611-43363630 | Msa0501790:intron | 35.0% |
| ! | AACTTGTGATATGGGTTTTG+AGG | + | chr3_4:43363919-43363938 | Msa0501790:intron | 35.0% |
| TGATATTGGAGTGATTTCAG+AGG | - | chr3_4:43363961-43363980 | None:intergenic | 35.0% | |
| TACAGTTAGACAGTTACACA+CGG | - | chr3_4:43364205-43364224 | None:intergenic | 35.0% | |
| !!! | TACATTTTTGGTCCCCATTA+TGG | - | chr3_4:43364396-43364415 | None:intergenic | 35.0% |
| TATTGATCATTTGCAGCAGA+TGG | + | chr3_4:43364455-43364474 | Msa0501790:intron | 35.0% | |
| AGGAGAAGAAAACTAGAAAG+AGG | + | chr3_4:43364514-43364533 | Msa0501790:CDS | 35.0% | |
| GGAGAAGAAAACTAGAAAGA+GGG | + | chr3_4:43364515-43364534 | Msa0501790:CDS | 35.0% | |
| CAATGTTGAAACGACTTCAA+AGG | - | chr3_4:43364631-43364650 | None:intergenic | 35.0% | |
| !! | CTTTGAAGTCGTTTCAACAT+TGG | + | chr3_4:43364629-43364648 | Msa0501790:intron | 35.0% |
| ACAGAGATCTAGGTGTTAAA+AGG | + | chr3_4:43364776-43364795 | Msa0501790:CDS | 35.0% | |
| !!! | GTTTTTGGTTTTTGTTCTGG+AGG | - | chr3_4:43364814-43364833 | None:intergenic | 35.0% |
| TATGAAAGGAAAATGCCATG+AGG | + | chr3_4:43364852-43364871 | Msa0501790:CDS | 35.0% | |
| ATAAAGTGAAGAAGAAGTCG+GGG | - | chr3_4:43364903-43364922 | None:intergenic | 35.0% | |
| ACGACGTTACAAAGAGAATT+GGG | + | chr3_4:43365008-43365027 | Msa0501790:intron | 35.0% | |
| ! | TTTCCACCATCTTTTCTACT+AGG | - | chr3_4:43365040-43365059 | None:intergenic | 35.0% |
| AAACTAGACTTAGGTGGTTT+GGG | + | chr3_4:43365057-43365076 | Msa0501790:intron | 35.0% | |
| GACATGTAGATTCTGTAGTA+AGG | + | chr3_4:43365095-43365114 | Msa0501790:intron | 35.0% | |
| AGAGTAGTCAAATCACTAGA+CGG | + | chr3_4:43365134-43365153 | Msa0501790:intron | 35.0% | |
| TCGTTTGATGCATGTTTAGT+GGG | + | chr3_4:43365253-43365272 | Msa0501790:intron | 35.0% | |
| TTCTCGTATGCATTGTGTAA+TGG | - | chr3_4:43365309-43365328 | None:intergenic | 35.0% | |
| ! | TGAACCCTGGAAAATTTTTG+TGG | + | chr3_4:43365589-43365608 | Msa0501790:intron | 35.0% |
| ! | TAAAAAGGCCTTATATGCGT+TGG | - | chr3_4:43365650-43365669 | None:intergenic | 35.0% |
| ATAGATTACACACACACACA+CGG | - | chr3_4:43365844-43365863 | None:intergenic | 35.0% | |
| AAAGGTGGCATATATTTGCA+GGG | - | chr3_4:43366037-43366056 | None:intergenic | 35.0% | |
| AAAAGGTGGCATATATTTGC+AGG | - | chr3_4:43366038-43366057 | None:intergenic | 35.0% | |
| ! | TGCAAATATATGCCACCTTT+TGG | + | chr3_4:43366037-43366056 | Msa0501790:intron | 35.0% |
| CCTCTAATACAGACAACATA+AGG | - | chr3_4:43366192-43366211 | None:intergenic | 35.0% | |
| CCTTATGTTGTCTGTATTAG+AGG | + | chr3_4:43366189-43366208 | Msa0501790:intron | 35.0% | |
| AGTGTATCACGGAACAATAT+TGG | - | chr3_4:43366711-43366730 | None:intergenic | 35.0% | |
| TTTGTATTTCCTGACGAAAG+AGG | - | chr3_4:43366942-43366961 | None:intergenic | 35.0% | |
| AGTACACCACTGAATAATCA+TGG | + | chr3_4:43366966-43366985 | Msa0501790:CDS | 35.0% | |
| TCACACCAATGTAGAACATA+AGG | + | chr3_4:43367037-43367056 | Msa0501790:CDS | 35.0% | |
| TGTCACCTTATGTTCTACAT+TGG | - | chr3_4:43367045-43367064 | None:intergenic | 35.0% | |
| TAGTACACCAAAACAAGACA+CGG | + | chr3_4:43367136-43367155 | Msa0501790:CDS | 35.0% | |
| GGAGTCAACTTTCTTTCTTT+CGG | + | chr3_4:43367260-43367279 | Msa0501790:CDS | 35.0% | |
| AACTTTCTTTCTTTCGGCAA+AGG | + | chr3_4:43367266-43367285 | Msa0501790:CDS | 35.0% | |
| AAACCAAAATTGACTGACTG+AGG | - | chr3_4:43367353-43367372 | None:intergenic | 35.0% | |
| TTCAGTTTCACTGCTGAATA+AGG | + | chr3_4:43367382-43367401 | Msa0501790:CDS | 35.0% | |
| CTGCTGAATAAGGATGATAA+TGG | + | chr3_4:43367392-43367411 | Msa0501790:CDS | 35.0% | |
| ! | ATTTTGTGCAGTTCTATCAC+TGG | - | chr3_4:43367423-43367442 | None:intergenic | 35.0% |
| TTCAGACAAAAACCAATCCA+TGG | + | chr3_4:43367475-43367494 | Msa0501790:CDS | 35.0% | |
| ! | ATCGGTTCAAGAGGTAAATA+AGG | + | chr3_4:43367571-43367590 | Msa0501790:CDS | 35.0% |
| !! | TAAGGCATCCGATAATTTTC+AGG | + | chr3_4:43367589-43367608 | Msa0501790:CDS | 35.0% |
| GAAGACAGATGTGAAACAAA+GGG | - | chr3_4:43367650-43367669 | None:intergenic | 35.0% | |
| TGAAGACAGATGTGAAACAA+AGG | - | chr3_4:43367651-43367670 | None:intergenic | 35.0% | |
| AATTCAATCCATGAAGCTCT+TGG | + | chr3_4:43367869-43367888 | Msa0501790:three_prime_UTR | 35.0% | |
| TGGTTATCATCCAATAAGCT+AGG | - | chr3_4:43367915-43367934 | None:intergenic | 35.0% | |
| TAGCTTATTGGATGATAACC+AGG | + | chr3_4:43367914-43367933 | Msa0501790:three_prime_UTR | 35.0% | |
| TTATTGGATGATAACCAGGT+AGG | + | chr3_4:43367918-43367937 | Msa0501790:intron | 35.0% | |
| TATTGGATGATAACCAGGTA+GGG | + | chr3_4:43367919-43367938 | Msa0501790:intron | 35.0% | |
| ! | TTTCTATTTCTCTCACGGTA+TGG | + | chr3_4:43367961-43367980 | Msa0501790:intron | 35.0% |
| GTTGCAACTCAACTTTATTG+CGG | + | chr3_4:43368135-43368154 | Msa0501790:intron | 35.0% | |
| AACTTTATTGCGGACATTGT+AGG | + | chr3_4:43368145-43368164 | Msa0501790:intron | 35.0% | |
| TGACAACAAATTTGCAAAGG+TGG | + | chr3_4:43368191-43368210 | Msa0501790:three_prime_UTR | 35.0% | |
| ACAAGCAATATTCTTGCTTC+TGG | + | chr3_4:43368243-43368262 | Msa0501790:intron | 35.0% | |
| AACAGCAGACCAAGTTTAAT+AGG | - | chr3_4:43368330-43368349 | None:intergenic | 35.0% | |
| ! | ATCAATTGGCTTAGAGTGAG+TGG | - | chr3_4:43360820-43360839 | None:intergenic | 40.0% |
| AGGATATGAAAGGATGTACC+AGG | - | chr3_4:43361055-43361074 | None:intergenic | 40.0% | |
| CGTTGTATATTCACCATAGG+AGG | + | chr3_4:43361143-43361162 | Msa0501790:intron | 40.0% | |
| GGCTAAAAATTCACCTCCTA+TGG | - | chr3_4:43361159-43361178 | None:intergenic | 40.0% | |
| !!! | GAGGTGAATTTTTAGCCACT+AGG | + | chr3_4:43361162-43361181 | Msa0501790:intron | 40.0% |
| AAGCTACAAATTCTAGCCTC+GGG | + | chr3_4:43361411-43361430 | Msa0501790:intron | 40.0% | |
| GGCAAAATCAATGATACTCG+AGG | + | chr3_4:43361451-43361470 | Msa0501790:intron | 40.0% | |
| !! | GAGATGTTTTGTTCCGTGTT+TGG | - | chr3_4:43361531-43361550 | None:intergenic | 40.0% |
| CATCTCAAACCGTTATTGTC+CGG | + | chr3_4:43361545-43361564 | Msa0501790:intron | 40.0% | |
| CATGTATCACCGGACAATAA+CGG | - | chr3_4:43361557-43361576 | None:intergenic | 40.0% | |
| GGATCAAACTGATGATAGGT+TGG | + | chr3_4:43362167-43362186 | Msa0501790:intron | 40.0% | |
| ACTTTCAACTCAGAGTTCTC+AGG | - | chr3_4:43362320-43362339 | None:intergenic | 40.0% | |
| ! | GAGAACTCTGAGTTGAAAGT+TGG | + | chr3_4:43362320-43362339 | Msa0501790:CDS | 40.0% |
| CAACACTTTCAATGGTCTCA+TGG | - | chr3_4:43362400-43362419 | None:intergenic | 40.0% | |
| ! | CATGAGACCATTGAAAGTGT+TGG | + | chr3_4:43362398-43362417 | Msa0501790:CDS | 40.0% |
| CTTGTCTCCAACACTTTCAA+TGG | - | chr3_4:43362408-43362427 | None:intergenic | 40.0% | |
| !! | CATTGAAAGTGTTGGAGACA+AGG | + | chr3_4:43362406-43362425 | Msa0501790:CDS | 40.0% |
| TGATTTGAGTGCCAATGCTA+TGG | + | chr3_4:43362433-43362452 | Msa0501790:CDS | 40.0% | |
| ! | ATCATCTAGGACCATAGCAT+TGG | - | chr3_4:43362447-43362466 | None:intergenic | 40.0% |
| GAAATTCTGCTGCATCATCT+AGG | - | chr3_4:43362460-43362479 | None:intergenic | 40.0% | |
| GAACCATCTACACAAACAGA+TGG | + | chr3_4:43362494-43362513 | Msa0501790:CDS | 40.0% | |
| !! | AGTTGGAGCTTGTTGTGAAA+GGG | + | chr3_4:43362537-43362556 | Msa0501790:CDS | 40.0% |
| ! | ATTCTGTTTCTCGCAGTTCA+GGG | - | chr3_4:43362597-43362616 | None:intergenic | 40.0% |
| ! | TATTCTGTTTCTCGCAGTTC+AGG | - | chr3_4:43362598-43362617 | None:intergenic | 40.0% |
| AACTGCGAGAAACAGAATAG+CGG | + | chr3_4:43362599-43362618 | Msa0501790:CDS | 40.0% | |
| !! | CGGTAGTGAAGTTGATTTGA+TGG | + | chr3_4:43362619-43362638 | Msa0501790:CDS | 40.0% |
| CATGTTGAACATCTGTGTTC+TGG | + | chr3_4:43362656-43362675 | Msa0501790:CDS | 40.0% | |
| GGAGCTTAATCAACTTGACT+CGG | + | chr3_4:43362727-43362746 | Msa0501790:CDS | 40.0% | |
| !! | CTTAATCAACTTGACTCGGA+AGG | + | chr3_4:43362731-43362750 | Msa0501790:CDS | 40.0% |
| TCATGTGTCCGAATCAACAA+AGG | + | chr3_4:43362757-43362776 | Msa0501790:CDS | 40.0% | |
| CATGTGTCCGAATCAACAAA+GGG | + | chr3_4:43362758-43362777 | Msa0501790:CDS | 40.0% | |
| ! | AGCTTGTCCCTTTGTTGATT+CGG | - | chr3_4:43362768-43362787 | None:intergenic | 40.0% |
| ! | GGAAACAGAATTGGTAACAC+TGG | + | chr3_4:43362841-43362860 | Msa0501790:CDS | 40.0% |
| TCAAGAGGGTGAATTTGAGA+AGG | + | chr3_4:43362895-43362914 | Msa0501790:CDS | 40.0% | |
| GGAAGAACAGAGTGATCATA+AGG | + | chr3_4:43362916-43362935 | Msa0501790:CDS | 40.0% | |
| CACATTTGATGTGTCTTCTG+CGG | + | chr3_4:43363177-43363196 | Msa0501790:CDS | 40.0% | |
| TTGGATGAGATTGAGAAACC+CGG | + | chr3_4:43363226-43363245 | Msa0501790:CDS | 40.0% | |
| CGGGAGTTCATTTGAAAACA+TGG | + | chr3_4:43363246-43363265 | Msa0501790:CDS | 40.0% | |
| AATACGGGTATCTCCTTTCA+AGG | + | chr3_4:43363280-43363299 | Msa0501790:CDS | 40.0% | |
| AGTCTTGCACAAAGGATTCA+TGG | + | chr3_4:43363366-43363385 | Msa0501790:CDS | 40.0% | |
| TGCTCACTACCAATGATGAA+TGG | + | chr3_4:43363514-43363533 | Msa0501790:intron | 40.0% | |
| TATTGGAGTGATTTCAGAGG+AGG | - | chr3_4:43363958-43363977 | None:intergenic | 40.0% | |
| TACGGTCAACCAAATCCTTA+AGG | + | chr3_4:43364354-43364373 | Msa0501790:intron | 40.0% | |
| !! | AGGGCATTGACACAACATAA+AGG | - | chr3_4:43364569-43364588 | None:intergenic | 40.0% |
| GCAGAAAAGAACAGAGATCT+AGG | + | chr3_4:43364766-43364785 | Msa0501790:CDS | 40.0% | |
| GACGACGTTACAAAGAGAAT+TGG | + | chr3_4:43365007-43365026 | Msa0501790:intron | 40.0% | |
| CGACGTTACAAAGAGAATTG+GGG | + | chr3_4:43365009-43365028 | Msa0501790:intron | 40.0% | |
| GTAGCACCTAGTAGAAAAGA+TGG | + | chr3_4:43365031-43365050 | Msa0501790:intron | 40.0% | |
| !! | AGATGGTGGAAACTAGACTT+AGG | + | chr3_4:43365048-43365067 | Msa0501790:intron | 40.0% |
| GAAACTAGACTTAGGTGGTT+TGG | + | chr3_4:43365056-43365075 | Msa0501790:intron | 40.0% | |
| AGTAAGGAGAGTAGATCACA+TGG | + | chr3_4:43365111-43365130 | Msa0501790:intron | 40.0% | |
| GTCGTTTGATGCATGTTTAG+TGG | + | chr3_4:43365252-43365271 | Msa0501790:intron | 40.0% | |
| GATGCATGTTTAGTGGGATA+AGG | + | chr3_4:43365259-43365278 | Msa0501790:intron | 40.0% | |
| ATGTTTAGTGGGATAAGGCT+TGG | + | chr3_4:43365264-43365283 | Msa0501790:intron | 40.0% | |
| GAAACTGAAAGTTACCTCCA+GGG | + | chr3_4:43365619-43365638 | Msa0501790:intron | 40.0% | |
| TTACCGGGACTAAAACCAAA+AGG | - | chr3_4:43366055-43366074 | None:intergenic | 40.0% | |
| TTCATCGCTGTATCTTCGTA+AGG | + | chr3_4:43366312-43366331 | Msa0501790:intron | 40.0% | |
| TTTCATACAAGAGTCACGAC+GGG | - | chr3_4:43366463-43366482 | None:intergenic | 40.0% | |
| CTTTCATACAAGAGTCACGA+CGG | - | chr3_4:43366464-43366483 | None:intergenic | 40.0% | |
| GTCGTGACTCTTGTATGAAA+GGG | + | chr3_4:43366463-43366482 | Msa0501790:CDS | 40.0% | |
| TCGTGACTCTTGTATGAAAG+GGG | + | chr3_4:43366464-43366483 | Msa0501790:CDS | 40.0% | |
| GGAGCCTTTAGACACAAAAT+TGG | - | chr3_4:43366532-43366551 | None:intergenic | 40.0% | |
| GTTGAATAGGATATCGTACC+TGG | - | chr3_4:43366587-43366606 | None:intergenic | 40.0% | |
| GTGTTGTCAATTGTGAATCG+CGG | - | chr3_4:43366792-43366811 | None:intergenic | 40.0% | |
| TTGTAGGCGTAGGTATATCT+TGG | - | chr3_4:43366893-43366912 | None:intergenic | 40.0% | |
| ! | TCTGGTTTGCAAGCATTTGT+AGG | - | chr3_4:43366909-43366928 | None:intergenic | 40.0% |
| !!! | GTGTCTTGTTTTGGTGTACT+AGG | - | chr3_4:43367137-43367156 | None:intergenic | 40.0% |
| TGGACAAGATTTCCCTTGTT+TGG | - | chr3_4:43367167-43367186 | None:intergenic | 40.0% | |
| AGTGGAACATGTGCAGATAA+AGG | + | chr3_4:43367188-43367207 | Msa0501790:CDS | 40.0% | |
| ! | GAAAGAAAGTTGACTCCCTT+GGG | - | chr3_4:43367257-43367276 | None:intergenic | 40.0% |
| ! | AGAAAGAAAGTTGACTCCCT+TGG | - | chr3_4:43367258-43367277 | None:intergenic | 40.0% |
| CAATATCATTCCTTCTGCAG+TGG | - | chr3_4:43367324-43367343 | None:intergenic | 40.0% | |
| ! | TTGCCTCAGTCAGTCAATTT+TGG | + | chr3_4:43367347-43367366 | Msa0501790:CDS | 40.0% |
| ATTCAGCTGATGATTCTGTG+AGG | + | chr3_4:43367531-43367550 | Msa0501790:CDS | 40.0% | |
| TTCAGCTGATGATTCTGTGA+GGG | + | chr3_4:43367532-43367551 | Msa0501790:CDS | 40.0% | |
| GGATCACAGCCATTGTAAAT+CGG | + | chr3_4:43367553-43367572 | Msa0501790:CDS | 40.0% | |
| ! | CCTCTTGAACCGATTTACAA+TGG | - | chr3_4:43367565-43367584 | None:intergenic | 40.0% |
| ! | CCATTGTAAATCGGTTCAAG+AGG | + | chr3_4:43367562-43367581 | Msa0501790:CDS | 40.0% |
| GTTTCACATCTGTCTTCAGA+AGG | + | chr3_4:43367653-43367672 | Msa0501790:CDS | 40.0% | |
| AAGCATCAAACTTAGGCCAA+AGG | + | chr3_4:43367699-43367718 | Msa0501790:CDS | 40.0% | |
| AGCATCAAACTTAGGCCAAA+GGG | + | chr3_4:43367700-43367719 | Msa0501790:CDS | 40.0% | |
| !!! | TTCGACTTTAGCTTTTGCAG+CGG | + | chr3_4:43367730-43367749 | Msa0501790:CDS | 40.0% |
| TCAAATCACCAAGAGCTTCA+TGG | - | chr3_4:43367880-43367899 | None:intergenic | 40.0% | |
| ! | GCTCTTGGTGATTTGAATCA+AGG | + | chr3_4:43367884-43367903 | Msa0501790:three_prime_UTR | 40.0% |
| ATTGGATGATAACCAGGTAG+GGG | + | chr3_4:43367920-43367939 | Msa0501790:intron | 40.0% | |
| CATAACTCGGCAATGTAACT+TGG | + | chr3_4:43368104-43368123 | Msa0501790:intron | 40.0% | |
| GCAGGTAACTTTGAGCAAAT+TGG | + | chr3_4:43368356-43368375 | Msa0501790:intron | 40.0% | |
| !! | TTGAGTTGAAACGGTGGAAG+GGG | - | chr3_4:43361017-43361036 | None:intergenic | 45.0% |
| !! | GTTGAGTTGAAACGGTGGAA+GGG | - | chr3_4:43361018-43361037 | None:intergenic | 45.0% |
| !! | TGTTGAGTTGAAACGGTGGA+AGG | - | chr3_4:43361019-43361038 | None:intergenic | 45.0% |
| !! | GAGGGGTTGTTGAGTTGAAA+CGG | - | chr3_4:43361026-43361045 | None:intergenic | 45.0% |
| GTTCAAAATGGCGGCTATAG+TGG | + | chr3_4:43361595-43361614 | Msa0501790:intron | 45.0% | |
| GCTGAGTCAATCACTGATAG+CGG | - | chr3_4:43361657-43361676 | None:intergenic | 45.0% | |
| TAACTGTGCGAGCAGAATAC+TGG | - | chr3_4:43361722-43361741 | None:intergenic | 45.0% | |
| ATTCTGCTCGCACAGTTACA+AGG | + | chr3_4:43361724-43361743 | Msa0501790:intron | 45.0% | |
| AACCTTCATGTCTCACAGCT+AGG | + | chr3_4:43361821-43361840 | Msa0501790:intron | 45.0% | |
| ACCTTCATGTCTCACAGCTA+GGG | + | chr3_4:43361822-43361841 | Msa0501790:intron | 45.0% | |
| !! | GAAAGTTGGTGCTGATGTCA+AGG | + | chr3_4:43362334-43362353 | Msa0501790:CDS | 45.0% |
| !! | TTCAAGGGTATTGGACCCTT+GGG | - | chr3_4:43362362-43362381 | None:intergenic | 45.0% |
| !! | GAGTTGGAGCTTGTTGTGAA+AGG | + | chr3_4:43362536-43362555 | Msa0501790:CDS | 45.0% |
| !! | GTTGGAGCTTGTTGTGAAAG+GGG | + | chr3_4:43362538-43362557 | Msa0501790:CDS | 45.0% |
| ! | TTCTGTTTCTCGCAGTTCAG+GGG | - | chr3_4:43362596-43362615 | None:intergenic | 45.0% |
| !! | AACACTGGTTTGTCCTCTAG+CGG | + | chr3_4:43362856-43362875 | Msa0501790:CDS | 45.0% |
| !! | GATAGAAGACGGTGGATTAC+TGG | + | chr3_4:43362997-43363016 | Msa0501790:CDS | 45.0% |
| TGGATGAGATTGAGAAACCC+GGG | + | chr3_4:43363227-43363246 | Msa0501790:CDS | 45.0% | |
| CTCGTCTGTAGTACAGGTAT+GGG | + | chr3_4:43363417-43363436 | Msa0501790:intron | 45.0% | |
| ACATAGGAAGCCGAAGGATA+TGG | - | chr3_4:43363686-43363705 | None:intergenic | 45.0% | |
| AACTCTACATAGGAAGCCGA+AGG | - | chr3_4:43363692-43363711 | None:intergenic | 45.0% | |
| ACCACTTTGTTCCTTTCTGC+TGG | - | chr3_4:43363808-43363827 | None:intergenic | 45.0% | |
| GCGATAAGAATGACCACAGT+AGG | + | chr3_4:43364158-43364177 | Msa0501790:intron | 45.0% | |
| CTAGTGTGACATTCCTACTG+TGG | - | chr3_4:43364174-43364193 | None:intergenic | 45.0% | |
| ! | GTTTTCTTCTCCTGAGAACC+AGG | - | chr3_4:43364507-43364526 | None:intergenic | 45.0% |
| ATCTAGGTGTTAAAAGGCCC+AGG | + | chr3_4:43364782-43364801 | Msa0501790:CDS | 45.0% | |
| ACTGTTACACTAGACGGGAT+AGG | + | chr3_4:43364975-43364994 | Msa0501790:intron | 45.0% | |
| GCACCTAGTAGAAAAGATGG+TGG | + | chr3_4:43365034-43365053 | Msa0501790:intron | 45.0% | |
| TGGTGGAAACTAGACTTAGG+TGG | + | chr3_4:43365051-43365070 | Msa0501790:intron | 45.0% | |
| AGTCAAATCACTAGACGGAG+AGG | + | chr3_4:43365139-43365158 | Msa0501790:intron | 45.0% | |
| GGAAACTGAAAGTTACCTCC+AGG | + | chr3_4:43365618-43365637 | Msa0501790:intron | 45.0% | |
| !! | AGGCCTTATATGCGTTGGTT+CGG | - | chr3_4:43365645-43365664 | None:intergenic | 45.0% |
| !!! | CCACCTTTTGGTTTTAGTCC+CGG | + | chr3_4:43366049-43366068 | Msa0501790:intron | 45.0% |
| CGTCGTGACTCTTGTATGAA+AGG | + | chr3_4:43366462-43366481 | Msa0501790:CDS | 45.0% | |
| TCTAAAGGCTCCTGTTGTAG+AGG | + | chr3_4:43366540-43366559 | Msa0501790:CDS | 45.0% | |
| ACAACGTTCACCTCTACAAC+AGG | - | chr3_4:43366553-43366572 | None:intergenic | 45.0% | |
| GTTGTAGAGGTGAACGTTGT+AGG | + | chr3_4:43366553-43366572 | Msa0501790:CDS | 45.0% | |
| ! | ACGTTGTAGGTTTTCACACC+AGG | + | chr3_4:43366566-43366585 | Msa0501790:CDS | 45.0% |
| TTGCAAGCATTTGTAGGCGT+AGG | - | chr3_4:43366903-43366922 | None:intergenic | 45.0% | |
| GAAAGAGGAGACTTCAACTC+TGG | - | chr3_4:43366927-43366946 | None:intergenic | 45.0% | |
| TTGAAGTCTCCTCTTTCGTC+AGG | + | chr3_4:43366930-43366949 | Msa0501790:CDS | 45.0% | |
| CCAGTGCCATGATTATTCAG+TGG | - | chr3_4:43366975-43366994 | None:intergenic | 45.0% | |
| CCACTGAATAATCATGGCAC+TGG | + | chr3_4:43366972-43366991 | Msa0501790:CDS | 45.0% | |
| ! | TCTAATTCCTTTGGGTGCTG+AGG | - | chr3_4:43367090-43367109 | None:intergenic | 45.0% |
| !!! | GGTTGTACCGTGTCTTGTTT+TGG | - | chr3_4:43367146-43367165 | None:intergenic | 45.0% |
| AGACACGGTACAACCAAACA+AGG | + | chr3_4:43367151-43367170 | Msa0501790:CDS | 45.0% | |
| GACACGGTACAACCAAACAA+GGG | + | chr3_4:43367152-43367171 | Msa0501790:CDS | 45.0% | |
| AAGGGAAATCTTGTCCACAG+TGG | + | chr3_4:43367170-43367189 | Msa0501790:CDS | 45.0% | |
| TATCTGCACATGTTCCACTG+TGG | - | chr3_4:43367187-43367206 | None:intergenic | 45.0% | |
| TCTATTCACTCCACTGCAGA+AGG | + | chr3_4:43367311-43367330 | Msa0501790:CDS | 45.0% | |
| TGTGAGAATAGCGCAGTTTG+TGG | - | chr3_4:43367449-43367468 | None:intergenic | 45.0% | |
| TGATTTCAGTCGTTCTGCCA+TGG | - | chr3_4:43367495-43367514 | None:intergenic | 45.0% | |
| ACATCTGTCTTCAGAAGGTC+TGG | + | chr3_4:43367658-43367677 | Msa0501790:CDS | 45.0% | |
| TCTTCAGAAGGTCTGGTATC+TGG | + | chr3_4:43367665-43367684 | Msa0501790:CDS | 45.0% | |
| AAGTCGAATTGAGTGCCCTT+TGG | - | chr3_4:43367718-43367737 | None:intergenic | 45.0% | |
| TGCTTCACCTGTATGATCAG+AGG | + | chr3_4:43367790-43367809 | Msa0501790:three_prime_UTR | 45.0% | |
| ! | CAAGGCACTTCCTAGCTTAT+TGG | + | chr3_4:43367902-43367921 | Msa0501790:three_prime_UTR | 45.0% |
| TTGGATGATAACCAGGTAGG+GGG | + | chr3_4:43367921-43367940 | Msa0501790:intron | 45.0% | |
| AAACTAAACATCCCCCTACC+TGG | - | chr3_4:43367935-43367954 | None:intergenic | 45.0% | |
| GTAAGTGACTGACAGGTAGA+TGG | - | chr3_4:43368223-43368242 | None:intergenic | 45.0% | |
| TGCTTGTGTAAGTGACTGAC+AGG | - | chr3_4:43368230-43368249 | None:intergenic | 45.0% | |
| !! | AATATATTAAAAATTACAAA+AGG | - | chr3_4:43363593-43363612 | None:intergenic | 5.0% |
| !!! | AAAATTATATATTTGTTAAT+TGG | + | chr3_4:43365381-43365400 | Msa0501790:intron | 5.0% |
| GTGAGTGGAACCGAGATTCT+GGG | - | chr3_4:43360805-43360824 | None:intergenic | 50.0% | |
| AGTGAGTGGAACCGAGATTC+TGG | - | chr3_4:43360806-43360825 | None:intergenic | 50.0% | |
| ! | GGTAAGGAGGGAAAGGCATA+GGG | - | chr3_4:43360934-43360953 | None:intergenic | 50.0% |
| GGAGAAGGGTGGTGTAAGTA+TGG | - | chr3_4:43360976-43360995 | None:intergenic | 50.0% | |
| GTGGGTGAGAATACGGAGAA+GGG | - | chr3_4:43360990-43361009 | None:intergenic | 50.0% | |
| GGGAAAGGTGGGTGAGAATA+CGG | - | chr3_4:43360997-43361016 | None:intergenic | 50.0% | |
| TTGAAACGGTGGAAGGGGAA+AGG | - | chr3_4:43361012-43361031 | None:intergenic | 50.0% | |
| !! | GGGTTGTTGAGTTGAAACGG+TGG | - | chr3_4:43361023-43361042 | None:intergenic | 50.0% |
| GATGTACCAGGAACGTTGAG+GGG | - | chr3_4:43361043-43361062 | None:intergenic | 50.0% | |
| GGATGTACCAGGAACGTTGA+GGG | - | chr3_4:43361044-43361063 | None:intergenic | 50.0% | |
| AGGATGTACCAGGAACGTTG+AGG | - | chr3_4:43361045-43361064 | None:intergenic | 50.0% | |
| ! | CCAGAGTTGATTCTAACCCG+AGG | - | chr3_4:43361430-43361449 | None:intergenic | 50.0% |
| ! | CCTCGGGTTAGAATCAACTC+TGG | + | chr3_4:43361427-43361446 | Msa0501790:intron | 50.0% |
| ! | CGGGTTAGAATCAACTCTGG+AGG | + | chr3_4:43361430-43361449 | Msa0501790:intron | 50.0% |
| AGGGCTTGTGATTGCAGTGT+CGG | + | chr3_4:43361788-43361807 | Msa0501790:intron | 50.0% | |
| ACCCTAGCTGTGAGACATGA+AGG | - | chr3_4:43361826-43361845 | None:intergenic | 50.0% | |
| ATGTCTCACAGCTAGGGTTG+CGG | + | chr3_4:43361828-43361847 | Msa0501790:intron | 50.0% | |
| TGGAATGGGGCAAGAAAACC+AGG | + | chr3_4:43362286-43362305 | Msa0501790:CDS | 50.0% | |
| GGGGCAAGAAAACCAGGAAA+AGG | + | chr3_4:43362292-43362311 | Msa0501790:CDS | 50.0% | |
| ! | AGTTCTCAGGCTCCTTTTCC+TGG | - | chr3_4:43362307-43362326 | None:intergenic | 50.0% |
| TGCTGATGTCAAGGATCCCA+AGG | + | chr3_4:43362343-43362362 | Msa0501790:CDS | 50.0% | |
| GCTGATGTCAAGGATCCCAA+GGG | + | chr3_4:43362344-43362363 | Msa0501790:CDS | 50.0% | |
| !! | CTTCAAGGGTATTGGACCCT+TGG | - | chr3_4:43362363-43362382 | None:intergenic | 50.0% |
| CAAGGGTCCAATACCCTTGA+AGG | + | chr3_4:43362361-43362380 | Msa0501790:CDS | 50.0% | |
| ! | TCTGTTTCTCGCAGTTCAGG+GGG | - | chr3_4:43362595-43362614 | None:intergenic | 50.0% |
| ! | CACGTCTGAAAGTGTACGTG+AGG | + | chr3_4:43362685-43362704 | Msa0501790:CDS | 50.0% |
| AGGTGCAGTCGCAAGTACAA+GGG | + | chr3_4:43362705-43362724 | Msa0501790:CDS | 50.0% | |
| !! | ACACTGGTTTGTCCTCTAGC+GGG | + | chr3_4:43362857-43362876 | Msa0501790:CDS | 50.0% |
| GCTCCCGTGATCTTTGATAG+AGG | - | chr3_4:43363398-43363417 | None:intergenic | 50.0% | |
| GCTCGTCTGTAGTACAGGTA+TGG | + | chr3_4:43363416-43363435 | Msa0501790:intron | 50.0% | |
| !! | GAGTGTTGATGCCAGCAGAA+AGG | + | chr3_4:43363794-43363813 | Msa0501790:CDS | 50.0% |
| GCCAGCAGAAAGGAACAAAG+TGG | + | chr3_4:43363804-43363823 | Msa0501790:CDS | 50.0% | |
| ! | CAGCAGATGGTTGATGCCAA+CGG | + | chr3_4:43364468-43364487 | Msa0501790:intron | 50.0% |
| ! | AGCAGATGGTTGATGCCAAC+GGG | + | chr3_4:43364469-43364488 | Msa0501790:intron | 50.0% |
| !! | TGTTCTGGAGGCTGAAACCT+GGG | - | chr3_4:43364802-43364821 | None:intergenic | 50.0% |
| !! | TTGTTCTGGAGGCTGAAACC+TGG | - | chr3_4:43364803-43364822 | None:intergenic | 50.0% |
| CTTGATGAGGTAACCAGGGT+CGG | - | chr3_4:43365735-43365754 | None:intergenic | 50.0% | |
| CCGGGACTAAAACCAAAAGG+TGG | - | chr3_4:43366052-43366071 | None:intergenic | 50.0% | |
| AGGCGTAGGTATATCTTGGC+TGG | - | chr3_4:43366889-43366908 | None:intergenic | 50.0% | |
| !! | ATTCCTTTGGGTGCTGAGGT+AGG | - | chr3_4:43367086-43367105 | None:intergenic | 50.0% |
| TATTCCAGCTGTCATGCCCA+AGG | + | chr3_4:43367238-43367257 | Msa0501790:CDS | 50.0% | |
| ATTCCAGCTGTCATGCCCAA+GGG | + | chr3_4:43367239-43367258 | Msa0501790:CDS | 50.0% | |
| TCAGTCGTTCTGCCATGGAT+TGG | - | chr3_4:43367490-43367509 | None:intergenic | 50.0% | |
| ! | ACTAGCAAGAAGCGTAGCTG+AGG | - | chr3_4:43367627-43367646 | None:intergenic | 50.0% |
| ! | CATACAGGTGAAGCACCAGT+AGG | - | chr3_4:43367785-43367804 | None:intergenic | 50.0% |
| TTCTCTCACGGTATGGTTGC+AGG | + | chr3_4:43367968-43367987 | Msa0501790:intron | 50.0% | |
| ! | TGGTCTGCTGTTGCTTATGC+AGG | + | chr3_4:43368338-43368357 | Msa0501790:intron | 50.0% |
| ! | CGGTAAGGAGGGAAAGGCAT+AGG | - | chr3_4:43360935-43360954 | None:intergenic | 55.0% |
| GATCGACGGTAAGGAGGGAA+AGG | - | chr3_4:43360941-43360960 | None:intergenic | 55.0% | |
| GGTGAGATCGACGGTAAGGA+GGG | - | chr3_4:43360946-43360965 | None:intergenic | 55.0% | |
| AGGTGAGATCGACGGTAAGG+AGG | - | chr3_4:43360947-43360966 | None:intergenic | 55.0% | |
| TGGTGTAAGTATGGCTGCGG+AGG | - | chr3_4:43360967-43360986 | None:intergenic | 55.0% | |
| GGGTGGTGTAAGTATGGCTG+CGG | - | chr3_4:43360970-43360989 | None:intergenic | 55.0% | |
| GGTGAGAATACGGAGAAGGG+TGG | - | chr3_4:43360987-43361006 | None:intergenic | 55.0% | |
| GGTGGGTGAGAATACGGAGA+AGG | - | chr3_4:43360991-43361010 | None:intergenic | 55.0% | |
| AACGGTGGAAGGGGAAAGGT+GGG | - | chr3_4:43361008-43361027 | None:intergenic | 55.0% | |
| AAACGGTGGAAGGGGAAAGG+TGG | - | chr3_4:43361009-43361028 | None:intergenic | 55.0% | |
| CAACAACCCCTCAACGTTCC+TGG | + | chr3_4:43361034-43361053 | Msa0501790:CDS | 55.0% | |
| GAGGTGCAGTCGCAAGTACA+AGG | + | chr3_4:43362704-43362723 | Msa0501790:CDS | 55.0% | |
| GGTGCAGTCGCAAGTACAAG+GGG | + | chr3_4:43362706-43362725 | Msa0501790:CDS | 55.0% | |
| GTAGGAAGAGATCCCGCTAG+AGG | - | chr3_4:43362872-43362891 | None:intergenic | 55.0% | |
| !! | TATATGCGTTGGTTCGGCCC+TGG | - | chr3_4:43365639-43365658 | None:intergenic | 55.0% |
| GGGCCGAACCAACGCATATA+AGG | + | chr3_4:43365639-43365658 | Msa0501790:intron | 55.0% | |
| TGCGTTGCTTGCCTTACCCT+TGG | + | chr3_4:43365709-43365728 | Msa0501790:intron | 55.0% | |
| CACGGACACACACACACACA+CGG | - | chr3_4:43365808-43365827 | None:intergenic | 55.0% | |
| TACAAGAGTCACGACGGGCA+TGG | - | chr3_4:43366458-43366477 | None:intergenic | 55.0% | |
| AAGCCTACCTCAGCACCCAA+AGG | + | chr3_4:43367080-43367099 | Msa0501790:CDS | 55.0% | |
| CGGAGGTGAGATCGACGGTA+AGG | - | chr3_4:43360950-43360969 | None:intergenic | 60.0% | |
| CGGGAGCTCGTCTGTAGTAC+AGG | + | chr3_4:43363411-43363430 | Msa0501790:CDS | 60.0% | |
| ! | CAAGCGTGGTCCTGGTTCTC+AGG | + | chr3_4:43364494-43364513 | Msa0501790:CDS | 60.0% |
| AGGTAACCAGGGTCGGCCAA+GGG | - | chr3_4:43365728-43365747 | None:intergenic | 60.0% | |
| CGACGGGCATGGTGAACACA+TGG | - | chr3_4:43366447-43366466 | None:intergenic | 60.0% | |
| ACTCCCTTGGGCATGACAGC+TGG | - | chr3_4:43367245-43367264 | None:intergenic | 60.0% | |
| GGCTGCGGAGGTGAGATCGA+CGG | - | chr3_4:43360955-43360974 | None:intergenic | 65.0% | |
| GATGCCAACGGGAGCAAGCG+TGG | + | chr3_4:43364480-43364499 | Msa0501790:CDS | 65.0% | |
| AGGACCACGCTTGCTCCCGT+TGG | - | chr3_4:43364487-43364506 | None:intergenic | 65.0% | |
| AACGGGAGCAAGCGTGGTCC+TGG | + | chr3_4:43364486-43364505 | Msa0501790:CDS | 65.0% | |
| !! | ATGCGTTGGTTCGGCCCTGG+AGG | - | chr3_4:43365636-43365655 | None:intergenic | 65.0% |
| ACCAGGGTCGGCCAAGGGTA+AGG | - | chr3_4:43365723-43365742 | None:intergenic | 65.0% | |
| GAGGTAACCAGGGTCGGCCA+AGG | - | chr3_4:43365729-43365748 | None:intergenic | 65.0% | |
| GCCTTACCCTTGGCCGACCC+TGG | + | chr3_4:43365719-43365738 | Msa0501790:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 43360756 | 43368651 | 43360756 | ID=Msa0501790;Name=Msa0501790 |
| chr3_4 | mRNA | 43360756 | 43368651 | 43360756 | ID=Msa0501790-mRNA-1;Parent=Msa0501790;Name=Msa0501790-mRNA-1;_AED=0.06;_eAED=0.06;_QI=149|0.87|1|1|0.75|0.66|9|509|872 |
| chr3_4 | exon | 43360756 | 43361055 | 43360756 | ID=Msa0501790-mRNA-1:exon:9180;Parent=Msa0501790-mRNA-1 |
| chr3_4 | exon | 43362273 | 43363432 | 43362273 | ID=Msa0501790-mRNA-1:exon:9181;Parent=Msa0501790-mRNA-1 |
| chr3_4 | exon | 43363792 | 43363857 | 43363792 | ID=Msa0501790-mRNA-1:exon:9182;Parent=Msa0501790-mRNA-1 |
| chr3_4 | exon | 43364471 | 43364536 | 43364471 | ID=Msa0501790-mRNA-1:exon:9183;Parent=Msa0501790-mRNA-1 |
| chr3_4 | exon | 43364745 | 43364873 | 43364745 | ID=Msa0501790-mRNA-1:exon:9184;Parent=Msa0501790-mRNA-1 |
| chr3_4 | exon | 43366444 | 43366587 | 43366444 | ID=Msa0501790-mRNA-1:exon:9185;Parent=Msa0501790-mRNA-1 |
| chr3_4 | exon | 43366879 | 43367935 | 43366879 | ID=Msa0501790-mRNA-1:exon:9186;Parent=Msa0501790-mRNA-1 |
| chr3_4 | exon | 43368167 | 43368229 | 43368167 | ID=Msa0501790-mRNA-1:exon:9187;Parent=Msa0501790-mRNA-1 |
| chr3_4 | exon | 43368360 | 43368651 | 43368360 | ID=Msa0501790-mRNA-1:exon:9188;Parent=Msa0501790-mRNA-1 |
| chr3_4 | five_prime_UTR | 43360756 | 43360904 | 43360756 | ID=Msa0501790-mRNA-1:five_prime_utr;Parent=Msa0501790-mRNA-1 |
| chr3_4 | CDS | 43360905 | 43361055 | 43360905 | ID=Msa0501790-mRNA-1:cds;Parent=Msa0501790-mRNA-1 |
| chr3_4 | CDS | 43362273 | 43363432 | 43362273 | ID=Msa0501790-mRNA-1:cds;Parent=Msa0501790-mRNA-1 |
| chr3_4 | CDS | 43363792 | 43363857 | 43363792 | ID=Msa0501790-mRNA-1:cds;Parent=Msa0501790-mRNA-1 |
| chr3_4 | CDS | 43364471 | 43364536 | 43364471 | ID=Msa0501790-mRNA-1:cds;Parent=Msa0501790-mRNA-1 |
| chr3_4 | CDS | 43364745 | 43364873 | 43364745 | ID=Msa0501790-mRNA-1:cds;Parent=Msa0501790-mRNA-1 |
| chr3_4 | CDS | 43366444 | 43366587 | 43366444 | ID=Msa0501790-mRNA-1:cds;Parent=Msa0501790-mRNA-1 |
| chr3_4 | CDS | 43366879 | 43367781 | 43366879 | ID=Msa0501790-mRNA-1:cds;Parent=Msa0501790-mRNA-1 |
| chr3_4 | three_prime_UTR | 43367782 | 43367935 | 43367782 | ID=Msa0501790-mRNA-1:three_prime_utr;Parent=Msa0501790-mRNA-1 |
| chr3_4 | three_prime_UTR | 43368167 | 43368229 | 43368167 | ID=Msa0501790-mRNA-1:three_prime_utr;Parent=Msa0501790-mRNA-1 |
| chr3_4 | three_prime_UTR | 43368360 | 43368651 | 43368360 | ID=Msa0501790-mRNA-1:three_prime_utr;Parent=Msa0501790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
