AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0509440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509440 MtrunA17_Chr3g0114371 89.170 277 24 2 168 442 1 273 5.56e-160 461
Msa0509440 MtrunA17_Chr3g0114381 84.409 186 28 1 437 622 108 292 1.33e-106 325
Msa0509440 MtrunA17_Chr3g0114381 59.184 98 9 1 1 67 195 292 5.78e-23 99.8
Msa0509440 MtrunA17_Chr8g0338931 56.934 274 68 4 441 665 15 287 2.36e-95 296
Msa0509440 MtrunA17_Chr8g0338931 52.941 85 39 1 1 85 98 181 3.51e-18 85.5
Msa0509440 MtrunA17_Chr8g0338931 59.322 59 23 1 52 109 228 286 1.04e-12 69.3
Msa0509440 MtrunA17_Chr7g0259481 63.636 231 61 3 235 442 219 449 2.27e-90 288
Msa0509440 MtrunA17_Chr7g0259481 67.442 86 28 0 148 233 34 119 2.38e-28 118
Msa0509440 MtrunA17_Chr8g0338801 57.200 250 65 4 446 654 80 328 5.44e-83 265
Msa0509440 MtrunA17_Chr8g0338801 55.000 100 28 3 1 85 159 256 4.91e-20 92.0
Msa0509440 MtrunA17_Chr2g0287241 72.487 189 32 4 272 442 19 205 1.07e-79 252
Msa0509440 MtrunA17_Chr8g0338901 51.908 262 93 5 419 657 886 1137 4.79e-71 250
Msa0509440 MtrunA17_Chr8g0338901 36.538 156 45 3 1 102 982 1137 7.08e-16 82.0
Msa0509440 MtrunA17_Chr3g0085531 46.931 277 93 5 437 665 74 344 2.13e-70 232
Msa0509440 MtrunA17_Chr3g0085531 52.564 78 36 1 1 78 158 234 4.14e-15 77.4
Msa0509440 MtrunA17_Chr8g0338841 48.097 289 115 7 375 655 248 509 5.78e-70 236
Msa0509440 MtrunA17_Chr8g0338841 50.943 106 46 2 1 100 404 509 2.78e-23 103
Msa0509440 MtrunA17_Chr8g0339011 44.631 298 155 4 368 657 792 1087 7.65e-70 246
Msa0509440 MtrunA17_Chr8g0339011 38.346 133 51 2 1 102 955 1087 2.48e-15 80.1
Msa0509440 MtrunA17_Chr8g0352221 48.780 287 81 5 437 658 789 1074 6.86e-69 243
Msa0509440 MtrunA17_Chr8g0352221 58.824 85 28 1 2 79 878 962 3.68e-19 92.4
Msa0509440 MtrunA17_Chr8g0338981 48.339 271 98 4 419 657 863 1123 9.90e-69 243
Msa0509440 MtrunA17_Chr8g0338981 34.545 165 45 3 1 102 959 1123 3.57e-16 82.8
Msa0509440 MtrunA17_Chr3g0085731 47.887 284 90 5 437 665 881 1161 2.58e-68 243
Msa0509440 MtrunA17_Chr3g0085731 53.846 78 35 1 1 78 968 1044 5.87e-14 75.9
Msa0509440 MtrunA17_Chr8g0370511 55.022 229 88 3 429 657 871 1084 2.42e-67 239
Msa0509440 MtrunA17_Chr8g0370511 47.200 125 43 3 1 102 960 1084 3.22e-21 99.0
Msa0509440 MtrunA17_Chr8g0339031 55.656 221 89 2 437 657 880 1091 6.72e-67 238
Msa0509440 MtrunA17_Chr8g0339031 47.619 126 41 2 1 102 967 1091 8.27e-23 104
Msa0509440 MtrunA17_Chr5g0414761 51.984 252 85 5 437 656 661 908 1.00e-66 236
Msa0509440 MtrunA17_Chr5g0414761 35.583 163 43 4 1 101 746 908 2.05e-16 83.6
Msa0509440 MtrunA17_Chr5g0430541 45.745 282 131 6 390 654 336 612 1.06e-65 228
Msa0509440 MtrunA17_Chr5g0430541 37.063 143 46 3 1 99 470 612 2.81e-15 79.3
Msa0509440 MtrunA17_Chr2g0296451 54.585 229 61 5 437 665 392 577 1.55e-62 218
Msa0509440 MtrunA17_Chr2g0296451 56.364 110 37 3 1 110 479 577 3.80e-25 110
Msa0509440 MtrunA17_Chr7g0223531 52.703 222 87 3 437 657 889 1093 2.11e-61 222
Msa0509440 MtrunA17_Chr7g0223531 47.899 119 44 2 1 102 976 1093 2.03e-21 99.8
Msa0509440 MtrunA17_Chr8g0339021 48.684 228 93 4 429 655 861 1065 2.09e-55 204
Msa0509440 MtrunA17_Chr8g0339021 43.103 116 50 2 1 100 950 1065 4.92e-18 89.0
Msa0509440 MtrunA17_Chr8g0338881 68.310 142 43 2 437 577 903 1043 1.10e-53 199
Msa0509440 MtrunA17_Chr8g0338881 49.438 89 38 2 1 84 991 1077 1.06e-14 78.2
Msa0509440 MtrunA17_Chr5g0420341 48.246 228 86 5 402 629 846 1041 6.77e-51 191
Msa0509440 MtrunA17_Chr5g0420341 51.136 88 42 1 1 88 961 1047 1.90e-16 84.0
Msa0509440 MtrunA17_Chr8g0352211 62.416 149 52 2 430 575 793 940 3.56e-49 186
Msa0509440 MtrunA17_Chr3g0116821 47.423 194 80 3 264 437 293 484 7.76e-47 172
Msa0509440 MtrunA17_Chr3g0116821 54.667 75 34 0 159 233 74 148 1.02e-16 83.6
Msa0509440 MtrunA17_Chr5g0420331 55.975 159 53 2 445 603 882 1023 4.27e-45 173
Msa0509440 MtrunA17_Chr5g0420331 59.375 64 25 1 1 64 961 1023 1.52e-12 71.2
Msa0509440 MtrunA17_Chr8g0343781 78.049 82 17 1 481 562 1 81 6.72e-36 130
Msa0509440 MtrunA17_Chr3g0135571 46.032 126 66 2 450 575 10 133 1.50e-29 115
Msa0509440 MtrunA17_Chr3g0135511 45.238 126 67 2 450 575 10 133 1.66e-28 112
Msa0509440 MtrunA17_Chr4g0005851 44.755 143 77 2 437 579 918 1058 4.28e-28 120
Msa0509440 MtrunA17_Chr3g0135541 32.719 217 122 4 359 575 93 285 5.14e-28 115
Msa0509440 MtrunA17_Chr6g0455131 47.059 119 62 1 450 568 989 1106 1.40e-27 119
Msa0509440 MtrunA17_Chr7g0257531 41.844 141 80 2 437 577 532 670 1.54e-27 118
Msa0509440 MtrunA17_Chr4g0009041 37.888 161 97 2 417 575 1360 1519 4.78e-27 117
Msa0509440 MtrunA17_Chr4g0014821 43.200 125 68 3 451 575 7 128 2.93e-26 105
Msa0509440 MtrunA17_Chr4g0005591 44.928 138 74 2 439 576 962 1097 3.36e-26 115
Msa0509440 MtrunA17_Chr7g0234901 47.500 120 60 3 450 568 420 537 3.91e-26 113
Msa0509440 MtrunA17_Chr6g0454911 46.218 119 62 2 450 568 123 239 5.54e-26 107
Msa0509440 MtrunA17_Chr6g0455221 45.299 117 62 2 450 566 1001 1115 4.12e-25 111
Msa0509440 MtrunA17_Chr6g0454851 44.531 128 69 2 448 575 986 1111 1.02e-24 110
Msa0509440 MtrunA17_Chr4g0005871 45.763 118 62 2 449 566 1020 1135 1.71e-24 109
Msa0509440 MtrunA17_Chr6g0454951 44.882 127 66 3 450 574 982 1106 2.09e-24 109
Msa0509440 MtrunA17_Chr2g0287231 83.051 59 10 0 175 233 14 72 2.35e-24 102
Msa0509440 MtrunA17_Chr4g0009141 39.416 137 82 1 445 581 1402 1537 2.84e-24 109
Msa0509440 MtrunA17_Chr6g0455251 46.154 117 61 2 450 566 1010 1124 4.30e-24 108
Msa0509440 MtrunA17_Chr6g0454961 43.307 127 71 1 450 576 932 1057 5.17e-24 108
Msa0509440 MtrunA17_Chr4g0009011 44.068 118 65 1 459 576 184 300 6.15e-24 103
Msa0509440 MtrunA17_Chr7g0255681 47.500 120 60 3 450 568 1912 2029 1.17e-23 107
Msa0509440 MtrunA17_Chr6g0455191 46.154 117 61 2 450 566 1213 1327 2.04e-23 106
Msa0509440 MtrunA17_Chr4g0009301 39.855 138 81 2 446 583 1424 1559 2.52e-23 106
Msa0509440 MtrunA17_Chr6g0454821 45.299 117 63 1 460 576 947 1062 5.54e-23 104
Msa0509440 MtrunA17_Chr6g0455551 41.732 127 73 1 450 576 980 1105 5.75e-23 104
Msa0509440 MtrunA17_Chr6g0454971 45.299 117 62 2 450 566 928 1042 1.39e-22 103
Msa0509440 MtrunA17_Chr4g0009171 39.552 134 80 1 450 583 1612 1744 3.05e-22 102
Msa0509440 MtrunA17_Chr6g0455211 42.520 127 71 2 449 575 929 1053 3.51e-22 102
Msa0509440 MtrunA17_Chr4g0005891 43.284 134 74 2 437 570 932 1063 8.69e-22 100
Msa0509440 MtrunA17_Chr4g0009101 41.803 122 70 1 455 576 1428 1548 1.49e-21 100
Msa0509440 MtrunA17_Chr4g0009361 43.802 121 67 1 446 566 399 518 4.10e-21 98.2
Msa0509440 MtrunA17_Chr4g0009241 36.170 141 89 1 446 586 1407 1546 4.92e-21 99.0
Msa0509440 MtrunA17_Chr4g0010711 40.496 121 71 1 450 570 1405 1524 1.05e-20 97.8
Msa0509440 MtrunA17_Chr6g0455031 39.860 143 68 5 437 566 894 1031 1.72e-20 96.7
Msa0509440 MtrunA17_Chr4g0009401 38.686 137 83 1 447 583 1386 1521 3.02e-20 96.3
Msa0509440 MtrunA17_Chr4g0009211 50.562 89 43 1 480 568 5 92 3.66e-19 84.3
Msa0509440 MtrunA17_Chr6g0454861 50.000 84 41 1 485 568 1 83 6.88e-19 82.8
Msa0509440 MtrunA17_Chr6g0454831 37.879 132 80 2 450 581 903 1032 1.48e-18 90.5
Msa0509440 MtrunA17_Chr4g0008981 38.318 107 65 1 480 586 5 110 3.44e-16 76.6
Msa0509440 MtrunA17_Chr6g0454881 43.056 72 40 1 506 577 1 71 8.09e-12 62.0
Msa0509440 MtrunA17_Chr5g0411061 41.558 77 37 2 581 657 4 72 1.39e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509440 AT4G02930.1 64.655 232 58 4 235 442 223 454 5.56e-89 285
Msa0509440 AT4G02930.1 83.824 68 11 0 166 233 56 123 1.42e-27 117
Msa0509440 AT4G20360.1 43.933 239 96 6 235 437 235 471 3.76e-49 179
Msa0509440 AT4G20360.1 45.745 94 51 0 140 233 42 135 5.61e-17 84.7
Msa0509440 AT4G20360.2 43.933 239 96 6 235 437 235 471 3.76e-49 179
Msa0509440 AT4G20360.2 45.745 94 51 0 140 233 42 135 5.61e-17 84.7

Find 144 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCAATATTCATCATTAA+AGG 0.169020 3_4:+57894650 None:intergenic
CTACCAAAGAGGAGTGATTT+AGG 0.200721 3_4:-57898691 Msa0509440:CDS
CTTCCGATCTTCATCATTAG+AGG 0.251053 3_4:+57899392 None:intergenic
TGTCCTTTAATGATGAATAT+TGG 0.281741 3_4:-57894653 Msa0509440:CDS
CTCTACTTTGTCACCAGGTC+TGG 0.285236 3_4:+57894611 None:intergenic
CGGGTGGAAATTATCCTTCT+TGG 0.289406 3_4:-57894872 Msa0509440:CDS
ATCAGGTAATTGTACCTTTC+CGG 0.301248 3_4:+57895970 None:intergenic
TGCATGTTCACTTCGGCTAA+TGG 0.309518 3_4:+57894453 None:intergenic
TGTTCTTGCAGTCTCATGTT+AGG 0.313247 3_4:-57896849 Msa0509440:intron
CTTCCAATTGTGAGAGGTTC+AGG 0.314697 3_4:-57896826 Msa0509440:CDS
GCTATCCTTGCAAAAGGAAT+TGG 0.323046 3_4:-57894303 Msa0509440:CDS
CATGTCAATGTTGGCACTAT+TGG 0.325935 3_4:-57897174 Msa0509440:CDS
CAATTTCCATTGTAATTGAT+TGG 0.329605 3_4:+57894526 None:intergenic
CATCACCAAAGTCCAATAAA+AGG 0.330270 3_4:-57899090 Msa0509440:CDS
GACCCTAAATCACTCCTCTT+TGG 0.331110 3_4:+57898688 None:intergenic
TATAATGACTTGTTCCTTCC+GGG 0.331745 3_4:-57894891 Msa0509440:CDS
TTATAATGACTTGTTCCTTC+CGG 0.333288 3_4:-57894892 Msa0509440:CDS
TAAGGAGACGGCTGTTTATC+TGG 0.336048 3_4:-57894556 Msa0509440:CDS
TAAGGAGACGGCTGTTTATC+TGG 0.336048 3_4:-57899298 Msa0509440:CDS
GATGCGTCTACTTTCATGTT+AGG 0.336203 3_4:+57894423 None:intergenic
CCTTCTTGGTTAGCCTATAC+AGG 0.338116 3_4:-57894858 Msa0509440:CDS
CGCATCATTTGACGTTGAAA+TGG 0.351414 3_4:-57894406 Msa0509440:CDS
AGAGAGGAATTACTATTGAT+AGG 0.353059 3_4:-57896945 Msa0509440:CDS
CTATCCTTGCAAAAGGAATT+GGG 0.358904 3_4:-57894302 Msa0509440:CDS
GTCATCAACTGACATTGAAT+TGG 0.363824 3_4:-57894478 Msa0509440:CDS
ACGGCTGTTTATCTGGTATA+TGG 0.365310 3_4:-57899291 Msa0509440:CDS
GTCGTCACCTATCATGAAAA+TGG 0.373216 3_4:-57894358 Msa0509440:CDS
AGAAGATGCATTGTTGTTGA+TGG 0.373565 3_4:+57897957 None:intergenic
CAGTCAATTGCAATGGAAAT+TGG 0.374164 3_4:-57899267 Msa0509440:CDS
ATATAGAAAATATCTTCTAT+TGG 0.374830 3_4:+57896706 None:intergenic
ATGGGAATTGAATGTCTTAC+TGG 0.381015 3_4:-57894738 Msa0509440:CDS
TTGAACCAACATGGAGATAA+AGG 0.391339 3_4:-57894267 Msa0509440:CDS
GAAAGATATCTTGAAACTAA+TGG 0.400329 3_4:-57896770 Msa0509440:CDS
TACCAAAGAGGAGTGATTTA+GGG 0.407935 3_4:-57898690 Msa0509440:intron
TCTACTTTGTCACCAGGTCT+GGG 0.410333 3_4:+57894612 None:intergenic
GAACAAGTCATTATAATTGT+AGG 0.416552 3_4:+57894899 None:intergenic
TCGGTTTATGGGAAGGGGCG+TGG 0.421024 3_4:-57896580 Msa0509440:intron
CCTTTGAAGACTACTGTAAC+TGG 0.424920 3_4:-57896396 Msa0509440:CDS
AGCATCACTTGATGTTGAAA+TGG 0.425195 3_4:-57899164 Msa0509440:CDS
TGAAAGTGGCCATGGTTCTC+TGG 0.426788 3_4:+57897923 None:intergenic
AGACCTGAACCTCTCACAAT+TGG 0.431602 3_4:+57896823 None:intergenic
CAATTTCCATTGCAATTGAC+TGG 0.436975 3_4:+57899268 None:intergenic
CTGAGGACGGCAGACATTAC+CGG 0.439899 3_4:-57895989 Msa0509440:CDS
CGACAAGGCTCCTGAGGAAA+AGG 0.440937 3_4:-57896968 Msa0509440:CDS
TTCATCAAAAGCAATGGCCT+TGG 0.441158 3_4:+57896993 None:intergenic
GTCATCACCTATCATTCAAA+TGG 0.446646 3_4:-57899116 Msa0509440:CDS
ATAACCATCTTGACATCATC+AGG 0.448855 3_4:+57895953 None:intergenic
TGAGCATGGATTGATTGTTA+AGG 0.451330 3_4:-57894574 Msa0509440:CDS
TGAGCATGGATTGATTGTTA+AGG 0.451330 3_4:-57899316 Msa0509440:CDS
TTTAAGAAACTTGTGGATAG+AGG 0.451784 3_4:-57896363 Msa0509440:CDS
CGGTAATGTCTGCCGTCCTC+AGG 0.456421 3_4:+57895990 None:intergenic
GAGAGGAATTACTATTGATA+GGG 0.469291 3_4:-57896944 Msa0509440:intron
GACGACTGCACCTTCACATC+AGG 0.471448 3_4:+57894375 None:intergenic
AAGTTGCACGAGATATGAAA+TGG 0.471511 3_4:+57897992 None:intergenic
GGTCTGGCAAGCTGTCGAAC+AGG 0.475682 3_4:+57896739 None:intergenic
AAGATCTCCACTTCGTCGCC+AGG 0.477857 3_4:+57899348 None:intergenic
ATGTATGCTATCCTTGCAAA+AGG 0.487783 3_4:-57894309 Msa0509440:CDS
GATGGCTCCATTTGAATGAT+AGG 0.488887 3_4:+57899109 None:intergenic
TTACCATGTTCAAGAGGATA+AGG 0.491022 3_4:+57895890 None:intergenic
CAAATATTTACTTTGAGAGA+AGG 0.491297 3_4:-57895623 Msa0509440:CDS
AGGTTTGAACAATCTTTGCC+TGG 0.494069 3_4:-57894247 Msa0509440:CDS
TTCATCATCTTCTGAAAACA+TGG 0.497277 3_4:-57894757 Msa0509440:CDS
TCAAATCTTTATCTCCATGT+TGG 0.498406 3_4:+57899020 None:intergenic
GGATATTGATTATCAGATGA+AGG 0.500725 3_4:-57894802 Msa0509440:CDS
ATCTGATAATCAATATCCTC+AGG 0.506081 3_4:+57894807 None:intergenic
CAACTCCTGCAGCAACTGTC+CGG 0.506240 3_4:+57895597 None:intergenic
TGAAGGTCCTTCACCTGTAT+AGG 0.512120 3_4:+57894845 None:intergenic
GGTGAAGAGGTTGAAATACT+AGG 0.517005 3_4:-57896514 Msa0509440:CDS
GATGACCTCACTTTCACATC+AGG 0.518874 3_4:+57899133 None:intergenic
ATTGTTGTTGATGGAAATGA+TGG 0.520449 3_4:+57897966 None:intergenic
CTTGAAACTAATGAAGAACT+AGG 0.522261 3_4:-57896796 Msa0509440:CDS
TCAAACCTTTATCTCCATGT+TGG 0.523059 3_4:+57894262 None:intergenic
GGAGACCGGACAGTTGCTGC+AGG 0.524551 3_4:-57895602 Msa0509440:CDS
TGTCTCGCTTGTATATGATC+TGG 0.525618 3_4:+57894682 None:intergenic
GAACAAGGTACTATCAAAGT+TGG 0.530652 3_4:-57896535 Msa0509440:CDS
GGAACTTGAAATTGTGCTGA+AGG 0.539835 3_4:+57894828 None:intergenic
TTACTTTGAGAGAAGGAGAC+CGG 0.540089 3_4:-57895616 Msa0509440:CDS
TTATAGGTTATCGCCAAGCC+TGG 0.541194 3_4:-57896073 Msa0509440:intron
GTCGATTTCATCAAAAGCAA+TGG 0.541309 3_4:+57896987 None:intergenic
CCAGTTACAGTAGTCTTCAA+AGG 0.542427 3_4:+57896396 None:intergenic
TTATTACGTCGGTGTGAAAG+TGG 0.545144 3_4:+57897909 None:intergenic
TACTATCAAAGTTGGTGAAG+AGG 0.550506 3_4:-57896527 Msa0509440:CDS
CATCACCAAAGTCCAACAAA+AGG 0.559203 3_4:-57894332 Msa0509440:CDS
CGTCGGTGTGAAAGTGGCCA+TGG 0.560957 3_4:+57897915 None:intergenic
TGGATTGATTGTTAAGGAGA+CGG 0.561564 3_4:-57894568 Msa0509440:CDS
TGGATTGATTGTTAAGGAGA+CGG 0.561564 3_4:-57899310 Msa0509440:CDS
ACGAGATATGAAATGGAAAG+AGG 0.562486 3_4:+57897999 None:intergenic
CCTGTATAGGCTAACCAAGA+AGG 0.562555 3_4:+57894858 None:intergenic
TGGTTAGCCTATACAGGTGA+AGG 0.568222 3_4:-57894852 Msa0509440:CDS
ACTATTGGTCATGTGGATCA+TGG 0.571616 3_4:-57897159 Msa0509440:CDS
TGATGGTTGCATGTTCACTT+CGG 0.572076 3_4:+57894446 None:intergenic
TCTACTTTCATGTTAGGTGA+TGG 0.572168 3_4:+57894429 None:intergenic
CAATAGTGCCAACATTGACA+TGG 0.572350 3_4:+57897175 None:intergenic
GATATTGATTATCAGATGAA+GGG 0.573639 3_4:-57894801 Msa0509440:CDS
AGAAAGCCCCATGTCAATGT+TGG 0.575301 3_4:-57897183 Msa0509440:CDS
GGGCGTGGAACTGTTGCCAC+TGG 0.576517 3_4:-57896565 Msa0509440:CDS
TAAGCATGGTGATGTGCAGA+GGG 0.577434 3_4:-57896204 Msa0509440:CDS
TGTTTATGCTTGAACCAACA+TGG 0.578179 3_4:-57899034 Msa0509440:CDS
ATTACCTGATGATGTCAAGA+TGG 0.579029 3_4:-57895957 Msa0509440:CDS
TGTCCTCTAATGATGAAGAT+CGG 0.587348 3_4:-57899395 Msa0509440:CDS
ATTCTCTTGATCTACCAAAG+AGG 0.587374 3_4:-57898702 Msa0509440:CDS
TCTCAGACCTGGCGACGAAG+TGG 0.587784 3_4:-57899355 Msa0509440:CDS
AGCACAATTTCAAGTTCCTG+AGG 0.588365 3_4:-57894823 Msa0509440:CDS
GGAACTGTTTAAGAAACTTG+TGG 0.588961 3_4:-57896370 Msa0509440:CDS
GGCCTTGGCATTACCTTCAG+CGG 0.589058 3_4:+57897008 None:intergenic
CGAGATATGAAATGGAAAGA+GGG 0.589604 3_4:+57898000 None:intergenic
TCAATTGCAATGGAAATTGG+AGG 0.591095 3_4:-57899264 Msa0509440:intron
TTACCTTATCCTCTTGAACA+TGG 0.592887 3_4:-57895893 Msa0509440:intron
TGTTTCTCTCCAGAGAACCA+TGG 0.595272 3_4:-57897932 Msa0509440:CDS
TCATCATCTTCTGAAAACAT+GGG 0.599520 3_4:-57894756 Msa0509440:CDS
TAATGCTTACCATGTTCAAG+AGG 0.600356 3_4:+57895884 None:intergenic
ATATAGCCAATCAATTACAA+TGG 0.600695 3_4:-57894532 Msa0509440:CDS
ATATGGCCAGTCAATTGCAA+TGG 0.602335 3_4:-57899274 Msa0509440:CDS
GTTAGGCTTCCAATTGTGAG+AGG 0.603182 3_4:-57896832 Msa0509440:CDS
AAGGATAATTTCCACCCGGA+AGG 0.604507 3_4:+57894877 None:intergenic
CAAGAAGGATAATTTCCACC+CGG 0.611086 3_4:+57894873 None:intergenic
AAGATCTCTACTTTGTCACC+AGG 0.617325 3_4:+57894606 None:intergenic
AATAGTGCCAACATTGACAT+GGG 0.618759 3_4:+57897176 None:intergenic
TGGTGATGTGCAGAGGGGAA+TGG 0.620920 3_4:-57896198 Msa0509440:intron
TTAAGCATGGTGATGTGCAG+AGG 0.621669 3_4:-57896205 Msa0509440:CDS
GACGGCAGACATTACCGGAA+AGG 0.627700 3_4:-57895984 Msa0509440:CDS
TGAAATCGACAAGGCTCCTG+AGG 0.628396 3_4:-57896974 Msa0509440:CDS
GAAGACTACTGTAACTGGTG+TGG 0.628650 3_4:-57896391 Msa0509440:CDS
TGTTGGCACTATTGGTCATG+TGG 0.632575 3_4:-57897166 Msa0509440:CDS
ACATCACCATGCTTAAGACC+TGG 0.636127 3_4:+57896212 None:intergenic
ACTAACTGCTGCAACTACAA+AGG 0.636345 3_4:-57897127 Msa0509440:intron
TCGCTTGTATATGATCTGGA+TGG 0.636837 3_4:+57894686 None:intergenic
GTAAGATCAAATCCCAGACC+TGG 0.638911 3_4:-57894624 Msa0509440:CDS
GATGTCAAGATGGTTATGCC+TGG 0.641755 3_4:-57895947 Msa0509440:CDS
TATCCTTGCAAAAGGAATTG+GGG 0.643201 3_4:-57894301 Msa0509440:CDS
ATTGCAGTCACATTATCACC+AGG 0.646485 3_4:+57895929 None:intergenic
AGCCGCTGAAGGTAATGCCA+AGG 0.647109 3_4:-57897010 Msa0509440:CDS
GCTCCTGAGGAAAAGGAGAG+AGG 0.653886 3_4:-57896961 Msa0509440:CDS
GAACAGGTACTAGCCGCTGA+AGG 0.656802 3_4:-57897021 Msa0509440:intron
AATGACTTGTTCCTTCCGGG+TGG 0.658159 3_4:-57894888 Msa0509440:CDS
GGATCTGTCACCTGATGTGA+AGG 0.658512 3_4:-57894385 Msa0509440:CDS
TGAAATACTAGGACTGACAC+AGG 0.658653 3_4:-57896503 Msa0509440:intron
GTAACATCAAATCTCAGACC+TGG 0.661268 3_4:-57899366 Msa0509440:CDS
TGTTTGTGCTTGAACCAACA+TGG 0.668146 3_4:-57894276 Msa0509440:CDS
ACCTTGTTCAACATCACCAG+TGG 0.684138 3_4:+57896549 None:intergenic
TGTCACCTGATGTGAAAGTG+AGG 0.705681 3_4:-57899138 Msa0509440:CDS
GCCACTGGTGATGTTGAACA+AGG 0.711766 3_4:-57896550 Msa0509440:CDS
ATAGTGCCAACATTGACATG+GGG 0.719538 3_4:+57897177 None:intergenic
AAGCATGGTGATGTGCAGAG+GGG 0.748666 3_4:-57896203 Msa0509440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGATTTGAACAATTTTTTAT+TGG - chr3_4:57894609-57894628 Msa0509440:CDS 15.0%
!! GTAATTTAACGAAATAAATT+AGG + chr3_4:57895494-57895513 None:intergenic 15.0%
!!! GTTTTCGAAATTTTAATTTT+TGG - chr3_4:57896161-57896180 Msa0509440:intron 15.0%
!! ATATAGAAAATATCTTCTAT+TGG + chr3_4:57896911-57896930 None:intergenic 15.0%
!!! TTCATTTTCATAAAATGAAA+TGG + chr3_4:57897477-57897496 None:intergenic 15.0%
!! TTATATAATTAACGAAGTAT+AGG - chr3_4:57898629-57898648 Msa0509440:intron 15.0%
!! TACAATAGATGAAAAACAAT+TGG + chr3_4:57894778-57894797 None:intergenic 20.0%
!! AGAAATAAAAACAATTCAGA+GGG + chr3_4:57894970-57894989 None:intergenic 20.0%
!! TTCAATACATTCATATTTGT+AGG - chr3_4:57895234-57895253 Msa0509440:intron 20.0%
!!! CTTATAATCTTTTTGCTTAA+TGG - chr3_4:57897153-57897172 Msa0509440:CDS 20.0%
!!! AATATTATGTGTCCATTTTT+AGG - chr3_4:57897353-57897372 Msa0509440:intron 20.0%
!!! TCAAAAGAAGGTTTTAAAAA+CGG + chr3_4:57897515-57897534 None:intergenic 20.0%
!! ATTGTTGTAAGATTATATTG+TGG + chr3_4:57897952-57897971 None:intergenic 20.0%
!! ACAATCATTTAATTATCAAC+AGG - chr3_4:57897967-57897986 Msa0509440:CDS 20.0%
!! GTAAAACAAACATATTCAAA+TGG + chr3_4:57898189-57898208 None:intergenic 20.0%
! AATCCTTGCAAAAAGAATTA+GGG - chr3_4:57894555-57894574 Msa0509440:CDS 25.0%
!!! GAACAATTTTTTATTGGACA+AGG - chr3_4:57894615-57894634 Msa0509440:CDS 25.0%
! GTTGAAAGTTAAAATGCATA+AGG - chr3_4:57894715-57894734 Msa0509440:CDS 25.0%
!! AATGCATAAGGTATTATGTT+AGG - chr3_4:57894727-57894746 Msa0509440:CDS 25.0%
! GAGAAATAAAAACAATTCAG+AGG + chr3_4:57894971-57894990 None:intergenic 25.0%
! TGGAAATATGAGTATTTAAG+TGG - chr3_4:57895210-57895229 Msa0509440:intron 25.0%
!! ATACAATACAAATCTAGAGT+CGG + chr3_4:57895280-57895299 None:intergenic 25.0%
!!! GGGTTTTAATATTATTACGT+CGG + chr3_4:57895719-57895738 None:intergenic 25.0%
! ATCATGCACATTAACAAATT+AGG - chr3_4:57895805-57895824 Msa0509440:intron 25.0%
!! ATATCTAAAGCATAGCATAT+TGG - chr3_4:57896132-57896151 Msa0509440:intron 25.0%
!!! TAATTTTTGGTGACAAGATT+TGG - chr3_4:57896174-57896193 Msa0509440:intron 25.0%
! AAACGAAAACAACAATAGAA+AGG + chr3_4:57896409-57896428 None:intergenic 25.0%
!!! AAGTGAATTGATTGATTTTG+TGG - chr3_4:57896571-57896590 Msa0509440:intron 25.0%
! GAAAGATATCTTGAAACTAA+TGG - chr3_4:57896844-57896863 Msa0509440:intron 25.0%
! TCTTCTATTGGCATTAAAAA+AGG + chr3_4:57896899-57896918 None:intergenic 25.0%
!! CTATAATTTTCGTCAAAAGA+AGG + chr3_4:57897527-57897546 None:intergenic 25.0%
!! CTTCTTTTGACGAAAATTAT+AGG - chr3_4:57897525-57897544 Msa0509440:intron 25.0%
!! TTATATGTTTTCAATGTACC+AGG + chr3_4:57897562-57897581 None:intergenic 25.0%
!! TAAGATTATATTGTGGATTG+TGG + chr3_4:57897945-57897964 None:intergenic 25.0%
!! CAAATATTTACTTTGAGAGA+AGG - chr3_4:57897991-57898010 Msa0509440:CDS 25.0%
! TTTGTAATTAAGTCGCAAAT+AGG - chr3_4:57898098-57898117 Msa0509440:intron 25.0%
! TTGTAATTAAGTCGCAAATA+GGG - chr3_4:57898099-57898118 Msa0509440:intron 25.0%
! GAACAAGTCATTATAATTGT+AGG + chr3_4:57898718-57898737 None:intergenic 25.0%
!! GATATTGATTATCAGATGAA+GGG - chr3_4:57898813-57898832 Msa0509440:intron 25.0%
! TGTCCTTTAATGATGAATAT+TGG - chr3_4:57898961-57898980 Msa0509440:intron 25.0%
! CTTCCAATATTCATCATTAA+AGG + chr3_4:57898967-57898986 None:intergenic 25.0%
! ATATAGCCAATCAATTACAA+TGG - chr3_4:57899082-57899101 Msa0509440:CDS 25.0%
! CAATTTCCATTGTAATTGAT+TGG + chr3_4:57899091-57899110 None:intergenic 25.0%
TACTTTCATGTTATAGGTGA+TGG + chr3_4:57894428-57894447 None:intergenic 30.0%
TGCTTCTACTTTCATGTTAT+AGG + chr3_4:57894434-57894453 None:intergenic 30.0%
! GATTGTACACATCCTTTTAT+TGG + chr3_4:57894539-57894558 None:intergenic 30.0%
CAATCCTTGCAAAAAGAATT+AGG - chr3_4:57894554-57894573 Msa0509440:CDS 30.0%
TCAAATCTTTATCTCCATGT+TGG + chr3_4:57894597-57894616 None:intergenic 30.0%
! CAGTTTTCTTTCGTTTGTTT+TGG - chr3_4:57895028-57895047 Msa0509440:intron 30.0%
! ATTGTTGTTGATGGAAATGA+TGG + chr3_4:57895651-57895670 None:intergenic 30.0%
GGTAACAAGAAATGAAGTAA+GGG + chr3_4:57895739-57895758 None:intergenic 30.0%
AGGTAACAAGAAATGAAGTA+AGG + chr3_4:57895740-57895759 None:intergenic 30.0%
!!! TGACACATGGTTTTAAATTG+CGG - chr3_4:57895900-57895919 Msa0509440:CDS 30.0%
AAATGCTTGAAATACACACT+TGG - chr3_4:57896081-57896100 Msa0509440:intron 30.0%
AATGCTTGAAATACACACTT+GGG - chr3_4:57896082-57896101 Msa0509440:intron 30.0%
AAAGCATAGCATATTGGAAT+TGG - chr3_4:57896138-57896157 Msa0509440:intron 30.0%
AAGCATAGCATATTGGAATT+GGG - chr3_4:57896139-57896158 Msa0509440:intron 30.0%
!! ATTGATTGATTTTGTGGAAC+AGG - chr3_4:57896577-57896596 Msa0509440:intron 30.0%
AGAGAGGAATTACTATTGAT+AGG - chr3_4:57896669-57896688 Msa0509440:intron 30.0%
GAGAGGAATTACTATTGATA+GGG - chr3_4:57896670-57896689 Msa0509440:intron 30.0%
CTTGAAACTAATGAAGAACT+AGG - chr3_4:57896818-57896837 Msa0509440:CDS 30.0%
TATTGGCATTAAAAAAGGTC+TGG + chr3_4:57896894-57896913 None:intergenic 30.0%
TTTAAGAAACTTGTGGATAG+AGG - chr3_4:57897251-57897270 Msa0509440:intron 30.0%
AAAAACGGAGAAGGAAAAAT+TGG + chr3_4:57897500-57897519 None:intergenic 30.0%
ATGGTAAGCATTATCTATGA+TGG - chr3_4:57897740-57897759 Msa0509440:intron 30.0%
TTGATGTCGTATAAGAAAGT+TGG - chr3_4:57897843-57897862 Msa0509440:intron 30.0%
GCGACTTAATTACAAATTAC+TGG + chr3_4:57898094-57898113 None:intergenic 30.0%
! ATTTTTGACACTTGATGTGT+TGG - chr3_4:57898161-57898180 Msa0509440:intron 30.0%
!! TTGTATAGTAACTTGTTGCA+TGG - chr3_4:57898522-57898541 Msa0509440:intron 30.0%
GTGTCTATTATGCTCTTATA+TGG - chr3_4:57898554-57898573 Msa0509440:intron 30.0%
ATTCCTGTATCATAAGCATA+TGG + chr3_4:57898689-57898708 None:intergenic 30.0%
!! TTATAATGACTTGTTCCTTC+CGG - chr3_4:57898722-57898741 Msa0509440:CDS 30.0%
ATCTGATAATCAATATCCTC+AGG + chr3_4:57898810-57898829 None:intergenic 30.0%
! GGATATTGATTATCAGATGA+AGG - chr3_4:57898812-57898831 Msa0509440:intron 30.0%
! TTCATCATCTTCTGAAAACA+TGG - chr3_4:57898857-57898876 Msa0509440:intron 30.0%
! TCATCATCTTCTGAAAACAT+GGG - chr3_4:57898858-57898877 Msa0509440:intron 30.0%
TATATGACAAAAACATGTCC+AGG + chr3_4:57899388-57899407 None:intergenic 30.0%
TGTCCTCTAATGATGAAGAT+CGG - chr3_4:57894219-57894238 Msa0509440:CDS 35.0%
! ATCTTTGTAGCTTTTGAGCA+TGG - chr3_4:57894284-57894303 Msa0509440:CDS 35.0%
! TGAGCATGGATTGATTGTTA+AGG - chr3_4:57894298-57894317 Msa0509440:CDS 35.0%
TGGATTGATTGTTAAGGAGA+CGG - chr3_4:57894304-57894323 Msa0509440:CDS 35.0%
CAATTTCCATTGCAATTGAC+TGG + chr3_4:57894349-57894368 None:intergenic 35.0%
CAGTCAATTGCAATGGAAAT+TGG - chr3_4:57894347-57894366 Msa0509440:CDS 35.0%
TCAATTGCAATGGAAATTGG+AGG - chr3_4:57894350-57894369 Msa0509440:CDS 35.0%
GTCATCAACTAACATGGAAT+TGG - chr3_4:57894376-57894395 Msa0509440:CDS 35.0%
AGCATCACTTGATGTTGAAA+TGG - chr3_4:57894450-57894469 Msa0509440:CDS 35.0%
GTCATCACCTATCATTCAAA+TGG - chr3_4:57894498-57894517 Msa0509440:CDS 35.0%
! CTTTTATTGGACTTTGGTGA+TGG + chr3_4:57894526-57894545 None:intergenic 35.0%
CATCACCAAAGTCCAATAAA+AGG - chr3_4:57894524-57894543 Msa0509440:CDS 35.0%
! CACATCCTTTTATTGGACTT+TGG + chr3_4:57894532-57894551 None:intergenic 35.0%
! ATGCCCTAATTCTTTTTGCA+AGG + chr3_4:57894561-57894580 None:intergenic 35.0%
TGTTTATGCTTGAACCAACA+TGG - chr3_4:57894580-57894599 Msa0509440:CDS 35.0%
GTTTCCAAATTAGAAAGACG+TGG - chr3_4:57894691-57894710 Msa0509440:CDS 35.0%
AACTCCACGTCTTTCTAATT+TGG + chr3_4:57894698-57894717 None:intergenic 35.0%
ATGCACAAACATAAGCAATC+TGG - chr3_4:57894804-57894823 Msa0509440:CDS 35.0%
AACATAAGCAATCTGGCATA+TGG - chr3_4:57894811-57894830 Msa0509440:CDS 35.0%
ATTCTCTTGATCTACCAAAG+AGG - chr3_4:57894912-57894931 Msa0509440:CDS 35.0%
TACCAAAGAGGAGTGATTTA+GGG - chr3_4:57894924-57894943 Msa0509440:intron 35.0%
! ACAATTCAGAGGGTGATTTT+GGG + chr3_4:57894960-57894979 None:intergenic 35.0%
! AACAATTCAGAGGGTGATTT+TGG + chr3_4:57894961-57894980 None:intergenic 35.0%
! TTTGATTTCTCGTCTTTGTG+CGG - chr3_4:57895082-57895101 Msa0509440:intron 35.0%
CGAGATATGAAATGGAAAGA+GGG + chr3_4:57895617-57895636 None:intergenic 35.0%
ACGAGATATGAAATGGAAAG+AGG + chr3_4:57895618-57895637 None:intergenic 35.0%
AAGTTGCACGAGATATGAAA+TGG + chr3_4:57895625-57895644 None:intergenic 35.0%
! AGAAGATGCATTGTTGTTGA+TGG + chr3_4:57895660-57895679 None:intergenic 35.0%
CATTTCCCAATCAGTGTTTA+CGG + chr3_4:57896066-57896085 None:intergenic 35.0%
TGAACCACATCAGATGATTT+CGG + chr3_4:57896208-57896227 None:intergenic 35.0%
ACCACATCATCAATATATGC+TGG - chr3_4:57896298-57896317 Msa0509440:intron 35.0%
!!! CGAACCATGGTTTTAAATTG+CGG + chr3_4:57896324-57896343 None:intergenic 35.0%
AAAATACATGTGTCGAACCA+TGG + chr3_4:57896337-57896356 None:intergenic 35.0%
! TCGACACATGTATTTTGTGT+CGG - chr3_4:57896341-57896360 Msa0509440:intron 35.0%
AATAGTGCCAACATTGACAT+GGG + chr3_4:57896441-57896460 None:intergenic 35.0%
GGCATTAAATTTGTGTGACT+CGG - chr3_4:57896514-57896533 Msa0509440:CDS 35.0%
!! AAATTTGTGTGACTCGGTTT+AGG - chr3_4:57896520-57896539 Msa0509440:CDS 35.0%
! GTCGATTTCATCAAAAGCAA+TGG + chr3_4:57896630-57896649 None:intergenic 35.0%
! TGCTTTTGATGAAATCGACA+AGG - chr3_4:57896631-57896650 Msa0509440:intron 35.0%
ACTATTGATAGGGTAAGACT+TGG - chr3_4:57896680-57896699 Msa0509440:intron 35.0%
TTCCACTATCTTCGGTTTAT+GGG - chr3_4:57897023-57897042 Msa0509440:intron 35.0%
! GAACAAGGTACTATCAAAGT+TGG - chr3_4:57897079-57897098 Msa0509440:intron 35.0%
!! TACTATCAAAGTTGGTGAAG+AGG - chr3_4:57897087-57897106 Msa0509440:intron 35.0%
GGAACTGTTTAAGAAACTTG+TGG - chr3_4:57897244-57897263 Msa0509440:intron 35.0%
!!! CTCTTTTTTTCCTCGCAATT+TGG - chr3_4:57897315-57897334 Msa0509440:intron 35.0%
!! TTATGTGTCCATTTTTAGGC+TGG - chr3_4:57897357-57897376 Msa0509440:intron 35.0%
CTTTATCACCAGCCTAAAAA+TGG + chr3_4:57897368-57897387 None:intergenic 35.0%
! TTTTAGGCTGGTGATAAAGT+AGG - chr3_4:57897369-57897388 Msa0509440:intron 35.0%
! AAAGTAGGACTTCTTTTACC+AGG - chr3_4:57897384-57897403 Msa0509440:intron 35.0%
!!! GAAGGTTTTAAAAACGGAGA+AGG + chr3_4:57897509-57897528 None:intergenic 35.0%
! TCGACTCTAAATTTTACCTG+AGG - chr3_4:57897608-57897627 Msa0509440:intron 35.0%
! CTCTAAATTTTACCTGAGGA+CGG - chr3_4:57897612-57897631 Msa0509440:intron 35.0%
ATCAGGTAATTGTACCTTTC+CGG + chr3_4:57897647-57897666 None:intergenic 35.0%
! ATTACCTGATGATGTCAAGA+TGG - chr3_4:57897657-57897676 Msa0509440:intron 35.0%
ATAACCATCTTGACATCATC+AGG + chr3_4:57897664-57897683 None:intergenic 35.0%
TTACCTTATCCTCTTGAACA+TGG - chr3_4:57897721-57897740 Msa0509440:intron 35.0%
TTACCATGTTCAAGAGGATA+AGG + chr3_4:57897727-57897746 None:intergenic 35.0%
TAATGCTTACCATGTTCAAG+AGG + chr3_4:57897733-57897752 None:intergenic 35.0%
! AACATTCTAGGAAAGGACTT+TGG + chr3_4:57898046-57898065 None:intergenic 35.0%
! CCAAATCAACATTCTAGGAA+AGG + chr3_4:57898053-57898072 None:intergenic 35.0%
! CCTTTCCTAGAATGTTGATT+TGG - chr3_4:57898050-57898069 Msa0509440:intron 35.0%
ATTACTGGACAGAAACTTTG+TGG + chr3_4:57898079-57898098 None:intergenic 35.0%
!!! ATGTTTGTTTTACCTGTCTG+AGG - chr3_4:57898196-57898215 Msa0509440:intron 35.0%
ACTATACAAACATAACACGC+TGG + chr3_4:57898511-57898530 None:intergenic 35.0%
AAGCCATATGCTTATGATAC+AGG - chr3_4:57898683-57898702 Msa0509440:intron 35.0%
!! TATAATGACTTGTTCCTTCC+GGG - chr3_4:57898723-57898742 Msa0509440:CDS 35.0%
ATGGGAATTGAATGTCTTAC+TGG - chr3_4:57898876-57898895 Msa0509440:intron 35.0%
! ATCTTTGTAGCTTTTGAGCA+TGG - chr3_4:57894284-57894303 Msa0509440:CDS 35.0%
! TGAGCATGGATTGATTGTTA+AGG - chr3_4:57894298-57894317 Msa0509440:CDS 35.0%
TGGATTGATTGTTAAGGAGA+CGG - chr3_4:57894304-57894323 Msa0509440:CDS 35.0%
GTCATCAACTGACATTGAAT+TGG - chr3_4:57899136-57899155 Msa0509440:CDS 35.0%
TCTACTTTCATGTTAGGTGA+TGG + chr3_4:57899188-57899207 None:intergenic 35.0%
! TACATCCTTTTGTTGGACTT+TGG + chr3_4:57899290-57899309 None:intergenic 35.0%
! GATAGCATACATCCTTTTGT+TGG + chr3_4:57899297-57899316 None:intergenic 35.0%
ATGTATGCTATCCTTGCAAA+AGG - chr3_4:57899305-57899324 Msa0509440:CDS 35.0%
CTATCCTTGCAAAAGGAATT+GGG - chr3_4:57899312-57899331 Msa0509440:CDS 35.0%
TATCCTTGCAAAAGGAATTG+GGG - chr3_4:57899313-57899332 Msa0509440:CDS 35.0%
TTGAACCAACATGGAGATAA+AGG - chr3_4:57894589-57894608 Msa0509440:CDS 35.0%
TCAAACCTTTATCTCCATGT+TGG + chr3_4:57899355-57899374 None:intergenic 35.0%
CTTCCGATCTTCATCATTAG+AGG + chr3_4:57894225-57894244 None:intergenic 40.0%
GTAACATCAAATCTCAGACC+TGG - chr3_4:57894248-57894267 Msa0509440:CDS 40.0%
ACGGCTGTTTATCTGGTATA+TGG - chr3_4:57894323-57894342 Msa0509440:CDS 40.0%
ATATGGCCAGTCAATTGCAA+TGG - chr3_4:57894340-57894359 Msa0509440:CDS 40.0%
AGGTGAGTCATCAACTAACA+TGG - chr3_4:57894370-57894389 Msa0509440:CDS 40.0%
TGATGGTTGCATGTTCACTT+CGG + chr3_4:57894411-57894430 None:intergenic 40.0%
GATGGCTCCATTTGAATGAT+AGG + chr3_4:57894508-57894527 None:intergenic 40.0%
AGAAAAGTCACAGGCTGAAA+TGG + chr3_4:57894667-57894686 None:intergenic 40.0%
CTACCAAAGAGGAGTGATTT+AGG - chr3_4:57894923-57894942 Msa0509440:intron 40.0%
!! TTGCGTCAACGTTTTAGATC+TGG - chr3_4:57895190-57895209 Msa0509440:intron 40.0%
AAAGAGAAGGAATGAGCTAG+CGG + chr3_4:57895550-57895569 None:intergenic 40.0%
ATTGGAACCTTGGAAAGAGA+AGG + chr3_4:57895563-57895582 None:intergenic 40.0%
TTCCAAGGTTCCAATTCCAA+TGG - chr3_4:57895568-57895587 Msa0509440:intron 40.0%
AAGAAAGCAAGAGAAGCCAT+TGG + chr3_4:57895587-57895606 None:intergenic 40.0%
TTATTACGTCGGTGTGAAAG+TGG + chr3_4:57895708-57895727 None:intergenic 40.0%
GTTACCTACGTTACTTGTCA+TGG - chr3_4:57895753-57895772 Msa0509440:intron 40.0%
CATGCTTAGTGTTTGACACA+TGG - chr3_4:57895887-57895906 Msa0509440:intron 40.0%
!!! ATGGTTTTAAATTGCGGTCG+CGG - chr3_4:57895906-57895925 Msa0509440:CDS 40.0%
TCCACTACAGAGTCTTAGTT+TGG - chr3_4:57896039-57896058 Msa0509440:CDS 40.0%
ACCAAACTAAGACTCTGTAG+TGG + chr3_4:57896043-57896062 None:intergenic 40.0%
TTTGGTCCGTAAACACTGAT+TGG - chr3_4:57896057-57896076 Msa0509440:CDS 40.0%
! TTGGTCCGTAAACACTGATT+GGG - chr3_4:57896058-57896077 Msa0509440:CDS 40.0%
TGAAATACACACTTGGGAGA+CGG - chr3_4:57896088-57896107 Msa0509440:intron 40.0%
! TGGTGACAAGATTTGGAACA+TGG - chr3_4:57896181-57896200 Msa0509440:intron 40.0%
! GGTGACAAGATTTGGAACAT+GGG - chr3_4:57896182-57896201 Msa0509440:intron 40.0%
GTGATCTTCAACCATGTGTA+CGG + chr3_4:57896250-57896269 None:intergenic 40.0%
!! GCCAGCATATATTGATGATG+TGG + chr3_4:57896302-57896321 None:intergenic 40.0%
!! TGTATTTTGTGTCGGTGCAT+AGG - chr3_4:57896349-57896368 Msa0509440:intron 40.0%
!! GTATTTTGTGTCGGTGCATA+GGG - chr3_4:57896350-57896369 Msa0509440:intron 40.0%
ATAGTGCCAACATTGACATG+GGG + chr3_4:57896440-57896459 None:intergenic 40.0%
CAATAGTGCCAACATTGACA+TGG + chr3_4:57896442-57896461 None:intergenic 40.0%
CATGTCAATGTTGGCACTAT+TGG - chr3_4:57896440-57896459 Msa0509440:intron 40.0%
ACTATTGGTCATGTGGATCA+TGG - chr3_4:57896455-57896474 Msa0509440:intron 40.0%
ACTAACTGCTGCAACTACAA+AGG - chr3_4:57896487-57896506 Msa0509440:intron 40.0%
! TGCTGCAACTACAAAGGTTT+TGG - chr3_4:57896493-57896512 Msa0509440:intron 40.0%
TTCATCAAAAGCAATGGCCT+TGG + chr3_4:57896624-57896643 None:intergenic 40.0%
ATGAGACTGCAAGAACAATC+AGG + chr3_4:57896762-57896781 None:intergenic 40.0%
TGTTCTTGCAGTCTCATGTT+AGG - chr3_4:57896765-57896784 Msa0509440:CDS 40.0%
GAAGTTGACAACATATGTGG+AGG + chr3_4:57896993-57897012 None:intergenic 40.0%
CAGGAAGTTGACAACATATG+TGG + chr3_4:57896996-57897015 None:intergenic 40.0%
!! AAGATAGTGGAAGGAACATC+AGG + chr3_4:57897015-57897034 None:intergenic 40.0%
GATGTTCCTTCCACTATCTT+CGG - chr3_4:57897015-57897034 Msa0509440:CDS 40.0%
!! CATAAACCGAAGATAGTGGA+AGG + chr3_4:57897024-57897043 None:intergenic 40.0%
CTTCCACTATCTTCGGTTTA+TGG - chr3_4:57897022-57897041 Msa0509440:intron 40.0%
TTCCCATAAACCGAAGATAG+TGG + chr3_4:57897028-57897047 None:intergenic 40.0%
ACTATCTTCGGTTTATGGGA+AGG - chr3_4:57897027-57897046 Msa0509440:intron 40.0%
CTATCTTCGGTTTATGGGAA+GGG - chr3_4:57897028-57897047 Msa0509440:intron 40.0%
TATCTTCGGTTTATGGGAAG+GGG - chr3_4:57897029-57897048 Msa0509440:intron 40.0%
GGTGAAGAGGTTGAAATACT+AGG - chr3_4:57897100-57897119 Msa0509440:intron 40.0%
TGAAATACTAGGACTGACAC+AGG - chr3_4:57897111-57897130 Msa0509440:intron 40.0%
TTTATCAGTCTTCTGTGTGC+AGG - chr3_4:57897190-57897209 Msa0509440:intron 40.0%
TTATCAGTCTTCTGTGTGCA+GGG - chr3_4:57897191-57897210 Msa0509440:intron 40.0%
CCAGTTACAGTAGTCTTCAA+AGG + chr3_4:57897221-57897240 None:intergenic 40.0%
! CCTTTGAAGACTACTGTAAC+TGG - chr3_4:57897218-57897237 Msa0509440:intron 40.0%
TGCGAGGAAAAAAAGAGTAG+AGG + chr3_4:57897312-57897331 None:intergenic 40.0%
! CTTTTACCAGGTCTTAAGCA+TGG - chr3_4:57897396-57897415 Msa0509440:intron 40.0%
! TGTTTTCAATGTACCAGGCT+TGG + chr3_4:57897557-57897576 None:intergenic 40.0%
ATTGCAGTCACATTATCACC+AGG + chr3_4:57897688-57897707 None:intergenic 40.0%
! TTACTTTGAGAGAAGGAGAC+CGG - chr3_4:57897998-57898017 Msa0509440:CDS 40.0%
GGACTCCAAATCAACATTCT+AGG + chr3_4:57898058-57898077 None:intergenic 40.0%
TGTATACATCGCACCACAAT+TGG - chr3_4:57898454-57898473 Msa0509440:intron 40.0%
GTATACATCGCACCACAATT+GGG - chr3_4:57898455-57898474 Msa0509440:intron 40.0%
TATACATCGCACCACAATTG+GGG - chr3_4:57898456-57898475 Msa0509440:intron 40.0%
CAAGAAGGATAATTTCCACC+CGG + chr3_4:57898744-57898763 None:intergenic 40.0%
GGAACTTGAAATTGTGCTGA+AGG + chr3_4:57898789-57898808 None:intergenic 40.0%
!! AGCACAATTTCAAGTTCCTG+AGG - chr3_4:57898791-57898810 Msa0509440:intron 40.0%
TCGCTTGTATATGATCTGGA+TGG + chr3_4:57898931-57898950 None:intergenic 40.0%
TGTCTCGCTTGTATATGATC+TGG + chr3_4:57898935-57898954 None:intergenic 40.0%
AAGATCTCTACTTTGTCACC+AGG + chr3_4:57899011-57899030 None:intergenic 40.0%
TGATGGTTGCATGTTCACTT+CGG + chr3_4:57894411-57894430 None:intergenic 40.0%
GATGCGTCTACTTTCATGTT+AGG + chr3_4:57899194-57899213 None:intergenic 40.0%
CGCATCATTTGACGTTGAAA+TGG - chr3_4:57899208-57899227 Msa0509440:intron 40.0%
GTCGTCACCTATCATGAAAA+TGG - chr3_4:57899256-57899275 Msa0509440:intron 40.0%
! GATGGCTCCATTTTCATGAT+AGG + chr3_4:57899266-57899285 None:intergenic 40.0%
! CTTTTGTTGGACTTTGGTGA+TGG + chr3_4:57899284-57899303 None:intergenic 40.0%
CATCACCAAAGTCCAACAAA+AGG - chr3_4:57899282-57899301 Msa0509440:CDS 40.0%
GCTATCCTTGCAAAAGGAAT+TGG - chr3_4:57899311-57899330 Msa0509440:CDS 40.0%
TGTTTGTGCTTGAACCAACA+TGG - chr3_4:57899338-57899357 Msa0509440:CDS 40.0%
AGGTTTGAACAATCTTTGCC+TGG - chr3_4:57899367-57899386 Msa0509440:CDS 40.0%
TAAGGAGACGGCTGTTTATC+TGG - chr3_4:57894316-57894335 Msa0509440:CDS 45.0%
TGCATGTTCACTTCGGCTAA+CGG + chr3_4:57894404-57894423 None:intergenic 45.0%
TGTCACCTGATGTGAAAGTG+AGG - chr3_4:57894476-57894495 Msa0509440:CDS 45.0%
GATGACCTCACTTTCACATC+AGG + chr3_4:57894484-57894503 None:intergenic 45.0%
GAAACACGCAGAAAAGTCAC+AGG + chr3_4:57894676-57894695 None:intergenic 45.0%
GACCCTAAATCACTCCTCTT+TGG + chr3_4:57894929-57894948 None:intergenic 45.0%
! TCTAGAGTCGGTAAAGACAG+CGG + chr3_4:57895268-57895287 None:intergenic 45.0%
GCTCATTCCTTCTCTTTCCA+AGG - chr3_4:57895553-57895572 Msa0509440:intron 45.0%
AGCCATTGGAATTGGAACCT+TGG + chr3_4:57895573-57895592 None:intergenic 45.0%
GCAAGAGAAGCCATTGGAAT+TGG + chr3_4:57895581-57895600 None:intergenic 45.0%
TGTTTCTCTCCAGAGAACCA+TGG - chr3_4:57895682-57895701 Msa0509440:intron 45.0%
GCATCCATGACAAGTAACGT+AGG + chr3_4:57895760-57895779 None:intergenic 45.0%
ATCACAGTAGCCGTAATGAC+TGG + chr3_4:57895934-57895953 None:intergenic 45.0%
TGAAGATCACACCGCAATTG+TGG - chr3_4:57896260-57896279 Msa0509440:intron 45.0%
! CTGGCCGCAATTTAAAACCA+TGG - chr3_4:57896317-57896336 Msa0509440:intron 45.0%
AGAAAGCCCCATGTCAATGT+TGG - chr3_4:57896431-57896450 Msa0509440:intron 45.0%
TGTTGGCACTATTGGTCATG+TGG - chr3_4:57896448-57896467 Msa0509440:intron 45.0%
! ATTCCTCTCTCCTTTTCCTC+AGG + chr3_4:57896659-57896678 None:intergenic 45.0%
GTTAGGCTTCCAATTGTGAG+AGG - chr3_4:57896782-57896801 Msa0509440:CDS 45.0%
CTTCCAATTGTGAGAGGTTC+AGG - chr3_4:57896788-57896807 Msa0509440:CDS 45.0%
AGACCTGAACCTCTCACAAT+TGG + chr3_4:57896794-57896813 None:intergenic 45.0%
ACCTTGTTCAACATCACCAG+TGG + chr3_4:57897068-57897087 None:intergenic 45.0%
GAAGACTACTGTAACTGGTG+TGG - chr3_4:57897223-57897242 Msa0509440:intron 45.0%
! TTCCTCGCAATTTGGACTAG+TGG - chr3_4:57897323-57897342 Msa0509440:intron 45.0%
ATCCACTAGTCCAAATTGCG+AGG + chr3_4:57897328-57897347 None:intergenic 45.0%
ACATCACCATGCTTAAGACC+TGG + chr3_4:57897405-57897424 None:intergenic 45.0%
! TTAAGCATGGTGATGTGCAG+AGG - chr3_4:57897409-57897428 Msa0509440:intron 45.0%
! TAAGCATGGTGATGTGCAGA+GGG - chr3_4:57897410-57897429 Msa0509440:intron 45.0%
TTATAGGTTATCGCCAAGCC+TGG - chr3_4:57897541-57897560 Msa0509440:intron 45.0%
GATGTCAAGATGGTTATGCC+TGG - chr3_4:57897667-57897686 Msa0509440:intron 45.0%
! GTGGTCACACACAAAAGTGT+TGG + chr3_4:57897926-57897945 None:intergenic 45.0%
ATTGAAACCAGCATGCAGAG+AGG - chr3_4:57898122-57898141 Msa0509440:intron 45.0%
ATAGATTCCTCTCTGCATGC+TGG + chr3_4:57898132-57898151 None:intergenic 45.0%
!! GAAACACTGATTCCTCAGAC+AGG + chr3_4:57898211-57898230 None:intergenic 45.0%
TGAAGATCACACCCCAATTG+TGG + chr3_4:57898470-57898489 None:intergenic 45.0%
AAGGATAATTTCCACCCGGA+AGG + chr3_4:57898740-57898759 None:intergenic 45.0%
CGGGTGGAAATTATCCTTCT+TGG - chr3_4:57898742-57898761 Msa0509440:intron 45.0%
CCTGTATAGGCTAACCAAGA+AGG + chr3_4:57898759-57898778 None:intergenic 45.0%
!! CCTTCTTGGTTAGCCTATAC+AGG - chr3_4:57898756-57898775 Msa0509440:intron 45.0%
!! TGGTTAGCCTATACAGGTGA+AGG - chr3_4:57898762-57898781 Msa0509440:intron 45.0%
TGAAGGTCCTTCACCTGTAT+AGG + chr3_4:57898772-57898791 None:intergenic 45.0%
GTAAGATCAAATCCCAGACC+TGG - chr3_4:57898990-57899009 Msa0509440:intron 45.0%
TCTACTTTGTCACCAGGTCT+GGG + chr3_4:57899005-57899024 None:intergenic 45.0%
TAAGGAGACGGCTGTTTATC+TGG - chr3_4:57894316-57894335 Msa0509440:CDS 45.0%
TGCATGTTCACTTCGGCTAA+TGG + chr3_4:57894404-57894423 None:intergenic 45.0%
! ATGCCCCAATTCCTTTTGCA+AGG + chr3_4:57899319-57899338 None:intergenic 45.0%
TGAAAGTGGCCATGGTTCTC+TGG + chr3_4:57895694-57895713 None:intergenic 50.0%
TGTGCATGATGATCGCATGC+AGG + chr3_4:57895795-57895814 None:intergenic 50.0%
TGGGCCGAAATCATCTGATG+TGG - chr3_4:57896201-57896220 Msa0509440:CDS 50.0%
TAACGATGCAGCCGTACACA+TGG - chr3_4:57896236-57896255 Msa0509440:CDS 50.0%
! TTGTGTCGGTGCATAGGGTA+TGG - chr3_4:57896355-57896374 Msa0509440:intron 50.0%
! TGTGTCGGTGCATAGGGTAT+GGG - chr3_4:57896356-57896375 Msa0509440:intron 50.0%
TGAAATCGACAAGGCTCCTG+AGG - chr3_4:57896640-57896659 Msa0509440:intron 50.0%
! GCCACTGGTGATGTTGAACA+AGG - chr3_4:57897064-57897083 Msa0509440:intron 50.0%
! AAGCATGGTGATGTGCAGAG+GGG - chr3_4:57897411-57897430 Msa0509440:intron 50.0%
GTGTGATCTTCAACCACGTG+TGG - chr3_4:57898478-57898497 Msa0509440:intron 50.0%
!! AATGACTTGTTCCTTCCGGG+TGG - chr3_4:57898726-57898745 Msa0509440:CDS 50.0%
CTCTACTTTGTCACCAGGTC+TGG + chr3_4:57899006-57899025 None:intergenic 50.0%
GGATCTGTCACCTGATGTGA+AGG - chr3_4:57894471-57894490 Msa0509440:CDS 50.0%
AAGATCTCCACTTCGTCGCC+AGG + chr3_4:57894269-57894288 None:intergenic 55.0%
GGTCGCGGATCCAGTCATTA+CGG - chr3_4:57895921-57895940 Msa0509440:CDS 55.0%
ACCGCAATTGTGGTGCGATG+CGG - chr3_4:57896270-57896289 Msa0509440:intron 55.0%
ACCGCATCGCACCACAATTG+CGG + chr3_4:57896274-57896293 None:intergenic 55.0%
GAACAGGTACTAGCCGCTGA+AGG - chr3_4:57896593-57896612 Msa0509440:intron 55.0%
AGCCGCTGAAGGTAATGCCA+AGG - chr3_4:57896604-57896623 Msa0509440:intron 55.0%
GGCCTTGGCATTACCTTCAG+CGG + chr3_4:57896609-57896628 None:intergenic 55.0%
CGACAAGGCTCCTGAGGAAA+AGG - chr3_4:57896646-57896665 Msa0509440:intron 55.0%
GCTCCTGAGGAAAAGGAGAG+AGG - chr3_4:57896653-57896672 Msa0509440:intron 55.0%
! TGGTGATGTGCAGAGGGGAA+TGG - chr3_4:57897416-57897435 Msa0509440:intron 55.0%
CTGAGGACGGCAGACATTAC+CGG - chr3_4:57897625-57897644 Msa0509440:intron 55.0%
GACGGCAGACATTACCGGAA+AGG - chr3_4:57897630-57897649 Msa0509440:intron 55.0%
CAACTCCTGCAGCAACTGTC+CGG + chr3_4:57898020-57898039 None:intergenic 55.0%
GACGACTGCACCTTCACATC+AGG + chr3_4:57899242-57899261 None:intergenic 55.0%
TCTCAGACCTGGCGACGAAG+TGG - chr3_4:57894259-57894278 Msa0509440:CDS 60.0%
CGTCGGTGTGAAAGTGGCCA+TGG + chr3_4:57895702-57895721 None:intergenic 60.0%
GCAATTGTGGTGCGATGCGG+TGG - chr3_4:57896273-57896292 Msa0509440:intron 60.0%
GGTCTGGCAAGCTGTCGAAC+AGG + chr3_4:57896878-57896897 None:intergenic 60.0%
TCGGTTTATGGGAAGGGGCG+TGG - chr3_4:57897034-57897053 Msa0509440:intron 60.0%
CGGTAATGTCTGCCGTCCTC+AGG + chr3_4:57897627-57897646 None:intergenic 60.0%
!! CGCTGGTGTTGATCCACACG+TGG + chr3_4:57898494-57898513 None:intergenic 60.0%
GGGCGTGGAACTGTTGCCAC+TGG - chr3_4:57897049-57897068 Msa0509440:intron 65.0%
GGAGACCGGACAGTTGCTGC+AGG - chr3_4:57898012-57898031 Msa0509440:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 57894218 57899418 57894218 ID=Msa0509440;Name=Msa0509440
chr3_4 mRNA 57894218 57899418 57894218 ID=Msa0509440-mRNA-1;Parent=Msa0509440;Name=Msa0509440-mRNA-1;_AED=0.34;_eAED=0.35;_QI=0|0.33|0.15|1|1|1|13|0|676
chr3_4 exon 57899265 57899418 57899265 ID=Msa0509440-mRNA-1:exon:13370;Parent=Msa0509440-mRNA-1
chr3_4 exon 57899000 57899187 57899000 ID=Msa0509440-mRNA-1:exon:13369;Parent=Msa0509440-mRNA-1
chr3_4 exon 57898691 57898758 57898691 ID=Msa0509440-mRNA-1:exon:13368;Parent=Msa0509440-mRNA-1
chr3_4 exon 57897916 57898026 57897916 ID=Msa0509440-mRNA-1:exon:13367;Parent=Msa0509440-mRNA-1
chr3_4 exon 57897128 57897203 57897128 ID=Msa0509440-mRNA-1:exon:13366;Parent=Msa0509440-mRNA-1
chr3_4 exon 57896945 57897037 57896945 ID=Msa0509440-mRNA-1:exon:13365;Parent=Msa0509440-mRNA-1
chr3_4 exon 57896702 57896860 57896702 ID=Msa0509440-mRNA-1:exon:13364;Parent=Msa0509440-mRNA-1
chr3_4 exon 57896504 57896587 57896504 ID=Msa0509440-mRNA-1:exon:13363;Parent=Msa0509440-mRNA-1
chr3_4 exon 57896359 57896424 57896359 ID=Msa0509440-mRNA-1:exon:13362;Parent=Msa0509440-mRNA-1
chr3_4 exon 57896199 57896261 57896199 ID=Msa0509440-mRNA-1:exon:13361;Parent=Msa0509440-mRNA-1
chr3_4 exon 57895894 57896089 57895894 ID=Msa0509440-mRNA-1:exon:13360;Parent=Msa0509440-mRNA-1
chr3_4 exon 57895589 57895647 57895589 ID=Msa0509440-mRNA-1:exon:13359;Parent=Msa0509440-mRNA-1
chr3_4 exon 57894218 57894931 57894218 ID=Msa0509440-mRNA-1:exon:13358;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57899265 57899418 57899265 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57899000 57899187 57899000 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57898691 57898758 57898691 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57897916 57898026 57897916 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57897128 57897203 57897128 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57896945 57897037 57896945 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57896702 57896860 57896702 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57896504 57896587 57896504 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57896359 57896424 57896359 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57896199 57896261 57896199 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57895894 57896089 57895894 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57895589 57895647 57895589 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
chr3_4 CDS 57894218 57894931 57894218 ID=Msa0509440-mRNA-1:cds;Parent=Msa0509440-mRNA-1
Gene Sequence

>Msa0509440

ATGTCCTCTAATGATGAAGATCGGAAGAATGTAACATCAAATCTCAGACCTGGCGACGAAGTGGAGATCTTTGTAGCTTTTGAGCATGGATTGATTGTTAAGGAGACGGCTGTTTATCTGGTATATGGCCAGTCAATTGCAATGGAAATTGGAGAAGCATCACTTGATGTTGAAATGGATCTGTCACCTGATGTGAAAGTGAGGTCATCACCTATCATTCAAATGGAGCCATCACCAAAGTCCAATAAAAGGATGTGTACAATCCTTGCAAAAAGAATTAGGGCATGTTTATGCTTGAACCAACATGGAGATAAAGATTTGAACAATTTTTTATTGGACAAGACTCACAGAGACAAAGATGTCGACACAACTTTTCATTCTCTTGATCTACCAAAGAGGAGTGATTTAGGAAAACCCTCTTTCCATTTCATATCTCGTGCAACTTCTTCCATCATTTCCATCAACAACAATGCATCTTCTTTTGTTTCTCTCCAGAGAACCATGGCCACTTTCACACCGACAAAGCCCCATGTCAATGTTGGCACTATTGGTCATGTGGATCATGGAAAAATCACACTAACTGCTGCAACTACAAAGGTACTAGCCGCTGAAGGTAATGCCAAGGCCATTGCTTTTGATGAAATCGACAAGGCTCCTGAGGAAAAGGAGAGAGGAATTACTATTGATAGGTCTCATGTTAGGCTTCCAATTGTGAGAGGTTCAGGTCTGTATCTTGAAACTAATGAAGAACTAGGAGAGAAAGATATCTTGAAACTAATGGTTGCTGATCCTGTTCGACAGCTTGCCAGACCTTTTTTAATGCCAATAGAAGATATTTTCTATATTCAAGGGCGTGGAACTGTTGCCACTGGTGATGTTGAACAAGGTACTATCAAAGTTGGTGAAGAGGTTGAAATACTAGGACTGACACAGGGTGAACCTTTGAAGACTACTGTAACTGGTGTGGAACTGTTTAAGAAACTTGTGGATAGAGGAGAAGCTGGTGATAAAGTAGGACTTCTTTTACCAGGTCTTAAGCATGGTGATGTGCAGAGGGGAATGGTTATCGCCAAGCCTGGTACATTGAAAACATATAAGAAGTTTGAAGCACAAATTTTTTATGTCGACTCTAAATTTTACCTGAGGACGGCAGACATTACCGGAAAGGTACAATTACCTGATGATGTCAAGATGGTTATGCCTGGTGATAATGTGACTGCAATTTTTGAGCTGATGTTACCTTATCCTCTTGAACATGGACAAATATTTACTTTGAGAGAAGGAGACCGGACAGTTGCTGCAGGAGTTGTCTCCAAAGAATTAACAACCTACAATTATAATGACTTGTTCCTTCCGGGTGGAAATTATCCTTCTTGGTTAGCCTATACAGGTGAAGGACCTTCAGCACAATTTCAAGTTCCTGAGGATATTGATTATCAGATGAAGGGAATAATCATATGTATTGTTTATTCATCATCTTCTGAAAACATGGGAATTGAATGTCTTACTGGTGTCTTGATCATTAATTACACAAAGTGCACCATCCAGATCATATACAAGCGAGACACGATAATGTCCTTTAATGATGAATATTGGAAGAATGTAAGATCAAATCCCAGACCTGGTGACAAAGTAGAGATCTTTGTAGCTTTTGAGCATGGATTGATTGTTAAGGAGACGGCTGTTTATCTGGTATATAGCCAATCAATTACAATGGAAATTGAACAATCAATTACTATTGAAGTTGAGTCATCAACTGACATTGAATTGGAGCCATTAGCCGAAGTGAACATGCAACCATCACCTAACATGAAAGTAGACGCATCATTTGACGTTGAAATGGATCTGTCACCTGATGTGAAGGTGCAGTCGTCACCTATCATGAAAATGGAGCCATCACCAAAGTCCAACAAAAGGATGTATGCTATCCTTGCAAAAGGAATTGGGGCATGTTTGTGCTTGAACCAACATGGAGATAAAGGTTTGAACAATCTTTGCCTGGACATGTTTTTGTCATATAAACACTCATGA
Protein sequence

>Msa0509440

MSSNDEDRKNVTSNLRPGDEVEIFVAFEHGLIVKETAVYLVYGQSIAMEIGEASLDVEMDLSPDVKVRSSPIIQMEPSPKSNKRMCTILAKRIRACLCLNQHGDKDLNNFLLDKTHRDKDVDTTFHSLDLPKRSDLGKPSFHFISRATSSIISINNNASSFVSLQRTMATFTPTKPHVNVGTIGHVDHGKITLTAATTKVLAAEGNAKAIAFDEIDKAPEEKERGITIDRSHVRLPIVRGSGLYLETNEELGEKDILKLMVADPVRQLARPFLMPIEDIFYIQGRGTVATGDVEQGTIKVGEEVEILGLTQGEPLKTTVTGVELFKKLVDRGEAGDKVGLLLPGLKHGDVQRGMVIAKPGTLKTYKKFEAQIFYVDSKFYLRTADITGKVQLPDDVKMVMPGDNVTAIFELMLPYPLEHGQIFTLREGDRTVAAGVVSKELTTYNYNDLFLPGGNYPSWLAYTGEGPSAQFQVPEDIDYQMKGIIICIVYSSSSENMGIECLTGVLIINYTKCTIQIIYKRDTIMSFNDEYWKNVRSNPRPGDKVEIFVAFEHGLIVKETAVYLVYSQSITMEIEQSITIEVESSTDIELEPLAEVNMQPSPNMKVDASFDVEMDLSPDVKVQSSPIMKMEPSPKSNKRMYAILAKGIGACLCLNQHGDKGLNNLCLDMFLSYKHS*