AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0514380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0514380 MtrunA17_Chr3g0122721 97.911 766 16 0 1 766 1 766 0.0 1539
Msa0514380 MtrunA17_Chr8g0377151 78.023 769 164 5 1 766 1 767 0.0 1186
Msa0514380 MtrunA17_Chr5g0404311 30.980 765 489 14 6 749 7 753 4.14e-104 337
Msa0514380 MtrunA17_Chr8g0373031 31.433 719 437 15 18 708 19 709 5.68e-93 307
Msa0514380 MtrunA17_Chr4g0031431 25.581 688 411 18 53 733 60 653 2.73e-51 190
Msa0514380 MtrunA17_Chr7g0237931 28.209 670 339 25 53 706 62 605 3.21e-49 183
Msa0514380 MtrunA17_Chr1g0199321 30.159 441 246 10 269 707 239 619 7.00e-47 177
Msa0514380 MtrunA17_Chr7g0248251 26.423 685 389 19 37 711 66 645 1.24e-46 176
Msa0514380 MtrunA17_Chr4g0044411 28.514 498 282 12 231 711 211 651 1.53e-46 176
Msa0514380 MtrunA17_Chr5g0437411 25.362 690 433 19 36 706 57 683 4.37e-43 166
Msa0514380 MtrunA17_Chr2g0284461 25.852 704 406 25 64 739 104 719 8.88e-43 166
Msa0514380 MtrunA17_Chr4g0013091 27.273 440 251 12 281 707 314 697 6.38e-35 142
Msa0514380 MtrunA17_Chr1g0183781 35.165 273 164 7 442 711 455 717 7.41e-30 126
Msa0514380 MtrunA17_Chr1g0183781 58.667 75 29 2 273 347 236 308 1.52e-22 103
Msa0514380 MtrunA17_Chr7g0261371 33.456 272 170 6 442 711 529 791 1.83e-28 122
Msa0514380 MtrunA17_Chr7g0261371 56.627 83 34 2 273 355 236 316 5.45e-25 111
Msa0514380 MtrunA17_Chr7g0275081 26.545 437 241 15 280 703 78 447 1.23e-26 114
Msa0514380 MtrunA17_Chr3g0106931 34.701 268 158 8 449 711 575 830 8.03e-26 114
Msa0514380 MtrunA17_Chr3g0106931 59.211 76 30 1 277 352 231 305 2.36e-24 109
Msa0514380 MtrunA17_Chr7g0234671 23.214 448 270 12 263 703 66 446 5.44e-25 108
Msa0514380 MtrunA17_Chr1g0155261 32.620 187 126 0 16 202 14 200 2.02e-24 102
Msa0514380 MtrunA17_Chr5g0429231 33.929 280 175 6 433 708 41 314 5.44e-24 104
Msa0514380 MtrunA17_Chr1g0198984 57.812 64 27 0 293 356 1 64 1.96e-23 95.9
Msa0514380 MtrunA17_Chr3g0137061 29.904 311 191 8 412 707 96 394 3.40e-23 103
Msa0514380 MtrunA17_Chr2g0290151 32.331 266 170 6 448 711 196 453 6.64e-23 102
Msa0514380 MtrunA17_Chr4g0059201 24.268 478 281 15 251 708 288 704 8.86e-23 103
Msa0514380 MtrunA17_Chr1g0189811 48.193 83 40 2 277 357 61 142 1.77e-22 101
Msa0514380 MtrunA17_Chr1g0149941 25.862 290 197 5 429 707 176 458 4.93e-22 100
Msa0514380 MtrunA17_Chr5g0413681 25.751 466 276 12 279 735 279 683 1.02e-21 100
Msa0514380 MtrunA17_Chr1g0152561 30.435 299 196 7 415 710 49 338 1.96e-21 96.7
Msa0514380 MtrunA17_Chr3g0118001 24.948 477 295 13 280 707 24 486 2.14e-21 99.0
Msa0514380 MtrunA17_Chr3g0117851 24.027 437 238 14 279 708 274 623 2.37e-21 99.4
Msa0514380 MtrunA17_Chr6g0449461 30.962 239 159 5 476 708 44 282 1.21e-19 90.9
Msa0514380 MtrunA17_Chr5g0420471 42.697 89 45 2 281 363 26 114 1.25e-19 92.4
Msa0514380 MtrunA17_Chr3g0110121 41.758 91 47 1 281 365 37 127 1.33e-19 92.4
Msa0514380 MtrunA17_Chr4g0044631 42.529 87 44 1 281 361 15 101 4.87e-19 90.5
Msa0514380 MtrunA17_Chr6g0479261 41.573 89 46 2 281 363 26 114 5.00e-19 90.5
Msa0514380 MtrunA17_Chr1g0177281 25.641 468 279 17 286 727 13 437 9.57e-19 89.7
Msa0514380 MtrunA17_Chr1g0177261 24.678 466 286 17 286 727 13 437 1.63e-18 89.0
Msa0514380 MtrunA17_Chr5g0434171 40.476 84 44 1 281 358 36 119 5.08e-18 87.4
Msa0514380 MtrunA17_Chr3g0129811 22.422 446 267 14 281 707 84 469 3.00e-17 85.5
Msa0514380 MtrunA17_Chr2g0280671 47.692 65 34 0 282 346 17 81 9.30e-17 83.2
Msa0514380 MtrunA17_Chr1g0196911 36.496 137 74 5 218 350 450 577 2.48e-16 84.0
Msa0514380 MtrunA17_Chr8g0390311 49.351 77 38 1 280 355 395 471 2.61e-16 84.0
Msa0514380 MtrunA17_Chr2g0322021 45.455 88 38 3 281 358 7 94 5.22e-16 80.9
Msa0514380 MtrunA17_Chr1g0177301 46.512 86 38 3 281 358 7 92 7.38e-16 80.5
Msa0514380 MtrunA17_Chr4g0048811 46.269 67 35 1 281 346 6 72 9.67e-16 79.3
Msa0514380 MtrunA17_Chr5g0400971 51.429 70 34 0 281 350 68 137 1.40e-15 80.1
Msa0514380 MtrunA17_Chr3g0111451 34.731 167 104 4 545 708 155 319 1.64e-15 79.3
Msa0514380 MtrunA17_Chr8g0384041 35.461 141 74 6 281 411 11 144 1.96e-15 79.3
Msa0514380 MtrunA17_Chr3g0134761 28.148 270 186 6 449 715 73 337 2.45e-15 78.2
Msa0514380 MtrunA17_Chr1g0177271 49.296 71 30 2 286 350 13 83 3.30e-15 79.0
Msa0514380 MtrunA17_Chr1g0152291 50.000 66 33 0 281 346 46 111 1.10e-14 77.0
Msa0514380 MtrunA17_Chr7g0267501 41.379 87 42 3 281 358 9 95 2.63e-14 75.9
Msa0514380 MtrunA17_Chr5g0435041 30.374 214 142 5 500 708 87 298 3.10e-14 75.1
Msa0514380 MtrunA17_Chr7g0275961 21.289 357 225 8 4 352 19 327 6.51e-14 75.9
Msa0514380 MtrunA17_Chr2g0283691 27.301 326 220 8 438 755 97 413 2.99e-13 72.8
Msa0514380 MtrunA17_Chr1g0202971 41.096 73 43 0 274 346 642 714 1.96e-12 70.9
Msa0514380 MtrunA17_Chr2g0328101 43.836 73 40 1 274 346 735 806 8.30e-12 68.9
Msa0514380 MtrunA17_Chr5g0412171 39.394 66 40 0 281 346 733 798 2.97e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0514380 AT1G24330.1 66.110 779 241 10 2 765 1 771 0.0 1026
Msa0514380 AT1G24330.2 66.110 779 241 10 2 765 1 771 0.0 1026
Msa0514380 AT1G67530.2 65.360 791 238 7 2 765 1 782 0.0 1015
Msa0514380 AT1G67530.1 65.360 791 238 7 2 765 1 782 0.0 1015
Msa0514380 AT1G67530.4 65.360 791 238 7 2 765 1 782 0.0 1015
Msa0514380 AT1G27910.1 64.955 779 248 8 2 766 1 768 0.0 994
Msa0514380 AT1G67530.3 70.254 511 136 3 2 504 1 503 0.0 717
Msa0514380 AT3G46510.1 26.234 709 414 20 6 703 14 624 5.50e-55 201
Msa0514380 AT5G67340.1 30.801 487 280 13 273 714 230 704 8.64e-52 192
Msa0514380 AT5G67340.2 30.801 487 280 13 273 714 230 704 8.64e-52 192
Msa0514380 AT3G54850.1 31.871 433 237 9 278 708 246 622 3.33e-48 181
Msa0514380 AT1G23030.1 28.702 439 248 9 272 708 234 609 2.24e-46 175
Msa0514380 AT1G71020.2 29.519 437 247 10 281 712 96 476 9.30e-45 168
Msa0514380 AT5G42340.1 27.259 686 374 21 37 711 88 659 1.78e-44 171
Msa0514380 AT2G28830.1 27.716 451 266 10 277 721 181 577 1.84e-44 169
Msa0514380 AT1G71020.1 29.519 437 247 10 281 712 244 624 9.37e-44 168
Msa0514380 AT1G29340.1 29.452 438 245 15 281 709 306 688 3.85e-33 137
Msa0514380 AT3G54790.2 25.573 524 292 13 277 710 200 715 2.46e-32 134
Msa0514380 AT3G54790.3 25.573 524 292 13 277 710 236 751 3.66e-32 134
Msa0514380 AT3G54790.1 25.573 524 292 13 277 710 236 751 3.66e-32 134
Msa0514380 AT2G23140.3 35.955 267 156 7 449 711 376 631 4.06e-32 133
Msa0514380 AT2G23140.3 50.000 94 46 1 286 379 47 139 8.99e-24 107
Msa0514380 AT2G23140.5 35.955 267 156 7 449 711 376 631 4.06e-32 133
Msa0514380 AT2G23140.5 50.000 94 46 1 286 379 47 139 8.99e-24 107
Msa0514380 AT2G23140.2 35.955 267 156 7 449 711 565 820 1.36e-31 132
Msa0514380 AT2G23140.2 50.000 94 46 1 286 379 236 328 1.07e-23 107
Msa0514380 AT2G23140.4 35.955 267 156 7 449 711 565 820 1.36e-31 132
Msa0514380 AT2G23140.4 50.000 94 46 1 286 379 236 328 1.07e-23 107
Msa0514380 AT2G23140.1 35.955 267 156 7 449 711 568 823 1.50e-31 132
Msa0514380 AT2G23140.1 50.000 94 46 1 286 379 239 331 9.86e-24 107
Msa0514380 AT3G07360.1 27.252 444 255 14 281 715 75 459 1.79e-30 126
Msa0514380 AT4G36550.1 36.898 187 116 1 18 204 14 198 1.37e-29 125
Msa0514380 AT4G36550.1 24.850 499 331 13 281 749 220 704 7.89e-28 120
Msa0514380 AT5G01830.1 29.316 307 153 11 58 354 96 348 6.33e-25 111
Msa0514380 AT1G60190.1 26.154 455 256 16 282 717 280 673 2.53e-24 109
Msa0514380 AT4G31890.3 26.837 313 207 8 435 737 153 453 6.78e-23 103
Msa0514380 AT4G31890.2 26.837 313 207 8 435 737 153 453 6.78e-23 103
Msa0514380 AT4G31890.1 26.837 313 207 8 435 737 153 453 6.78e-23 103
Msa0514380 AT2G25130.1 29.104 268 176 6 449 707 133 395 1.17e-21 99.4
Msa0514380 AT4G12710.1 34.323 303 176 11 427 716 48 340 5.08e-21 96.7
Msa0514380 AT1G49780.1 22.489 458 267 12 281 715 15 407 7.54e-21 96.3
Msa0514380 AT3G01400.1 32.075 265 168 7 449 710 87 342 1.45e-20 94.7
Msa0514380 AT5G58680.1 29.153 295 195 9 421 710 56 341 7.04e-19 89.7
Msa0514380 AT3G47820.1 25.247 507 306 16 250 707 5 487 1.24e-18 90.5
Msa0514380 AT1G10560.1 24.834 451 264 15 279 712 287 679 1.60e-18 90.9
Msa0514380 AT5G37490.1 39.560 91 54 1 269 359 21 110 1.64e-18 89.4
Msa0514380 AT3G03440.1 34.579 214 132 6 500 707 134 345 3.73e-18 88.2
Msa0514380 AT3G19380.1 40.187 107 60 2 281 383 15 121 3.73e-18 88.2
Msa0514380 AT1G66160.1 44.828 87 42 1 281 361 34 120 5.77e-18 87.8
Msa0514380 AT4G16490.1 29.044 272 181 7 448 715 206 469 1.95e-17 86.3
Msa0514380 AT3G52450.1 44.706 85 40 2 281 358 8 92 7.25e-17 84.3
Msa0514380 AT2G35930.1 44.444 90 42 3 276 358 9 97 1.05e-16 83.6
Msa0514380 AT5G62560.1 27.170 265 178 6 449 707 258 513 5.41e-16 82.4
Msa0514380 AT5G18340.1 37.273 110 65 3 257 364 50 157 6.84e-16 81.6
Msa0514380 AT5G65920.1 46.753 77 41 0 276 352 56 132 9.91e-16 80.9
Msa0514380 AT5G65920.2 46.753 77 41 0 276 352 56 132 9.91e-16 80.9
Msa0514380 AT3G49810.1 48.611 72 37 0 281 352 65 136 1.14e-15 80.9
Msa0514380 AT5G14510.1 28.947 228 140 8 494 708 62 280 5.90e-15 77.4
Msa0514380 AT1G15165.1 74.468 47 9 1 271 317 242 285 3.69e-14 75.1
Msa0514380 AT4G21350.1 43.284 67 37 1 281 346 6 72 1.46e-13 73.6
Msa0514380 AT5G09800.1 38.272 81 50 0 281 361 12 92 1.55e-13 73.9
Msa0514380 AT5G64660.1 42.647 68 39 0 281 348 11 78 1.65e-13 73.9
Msa0514380 AT3G18710.1 40.845 71 42 0 281 351 13 83 2.33e-13 73.2
Msa0514380 AT1G01660.1 38.889 72 44 0 280 351 497 568 3.22e-13 73.6
Msa0514380 AT1G01660.2 38.889 72 44 0 280 351 498 569 3.23e-13 73.6
Msa0514380 AT5G18320.1 45.714 70 37 1 281 350 73 141 3.53e-13 73.2
Msa0514380 AT3G61390.4 35.556 90 57 1 257 346 256 344 7.60e-13 71.2
Msa0514380 AT3G61390.2 34.783 92 59 1 257 348 331 421 1.37e-12 70.9
Msa0514380 AT1G76390.1 23.699 346 217 11 282 596 27 356 1.57e-12 71.6
Msa0514380 AT1G76390.2 23.699 346 217 11 282 596 27 356 1.57e-12 71.6
Msa0514380 AT2G27430.1 25.208 361 238 13 413 755 63 409 2.23e-12 70.5
Msa0514380 AT1G01680.1 39.130 69 42 0 282 350 235 303 2.58e-12 68.9
Msa0514380 AT5G65200.1 25.993 277 184 7 449 713 248 515 3.54e-12 70.1
Msa0514380 AT2G45920.1 42.424 66 38 0 281 346 326 391 4.70e-12 69.3
Msa0514380 AT5G18330.1 34.524 84 54 1 281 364 66 148 5.66e-12 69.3
Msa0514380 AT1G56040.1 42.188 64 37 0 280 343 353 416 7.49e-12 68.6
Msa0514380 AT1G56030.1 42.188 64 37 0 280 343 323 386 2.43e-11 67.0
Msa0514380 AT3G11840.1 40.659 91 46 3 281 364 11 100 3.58e-11 66.6

Find 203 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAATTTATTGAATTTATTT+TGG 0.151283 3_4:+65072727 Msa0514380:three_prime_UTR
GTTTACAGATCTTGAATTAA+TGG 0.154799 3_4:-65071084 None:intergenic
CTAGATATTGATTTACTTAG+AGG 0.192342 3_4:-65072519 None:intergenic
TTCCCAATCCATTGGGTATC+AGG 0.245347 3_4:+65069932 Msa0514380:CDS
TTACTAGCTAAGCAAGAATT+AGG 0.246079 3_4:-65072800 None:intergenic
GATCCTGTTATAATTGCTTC+TGG 0.247474 3_4:+65070840 Msa0514380:CDS
CACTTCTGTTGCATAATATT+AGG 0.257261 3_4:-65072290 None:intergenic
TTTGTTAGGTTTAAAATTAA+AGG 0.264194 3_4:-65070748 None:intergenic
CACTCATGTTCTCATGTAAA+TGG 0.264560 3_4:+65072656 Msa0514380:three_prime_UTR
CTATAAGTTGATTTCTTTCC+TGG 0.268300 3_4:+65068953 Msa0514380:five_prime_UTR
TAAATAAACTATATATTATA+TGG 0.270315 3_4:-65067969 None:intergenic
CTTATTGTTGTTGGAGGAAA+TGG 0.274126 3_4:+65071849 Msa0514380:CDS
AAGAAATCAACTTATAGTTT+TGG 0.278416 3_4:-65068947 None:intergenic
CTTATGATGCAGGCTATAAC+AGG 0.289276 3_4:+65069834 Msa0514380:intron
GGATACAATTGAGATCATTT+AGG 0.302817 3_4:+65068984 Msa0514380:five_prime_UTR
TAGTTCTAAGCATCTGGATT+AGG 0.316217 3_4:-65071975 None:intergenic
AGAAGAAGGAAGGGAGAGAT+AGG 0.320551 3_4:-65068046 None:intergenic
AATGCGATGGCTCTGGAAAA+TGG 0.322262 3_4:+65071407 Msa0514380:CDS
CACAGCCTGTTCCTGCTCTA+TGG 0.327053 3_4:-65072259 None:intergenic
GCCAATGTGCTTATCAGTTC+AGG 0.334557 3_4:-65072213 None:intergenic
CAGGTATAGCGCCTTCTTGC+AGG 0.336377 3_4:-65072332 None:intergenic
AGAGATTCGGGAGGGCCTTC+AGG 0.339326 3_4:-65071020 None:intergenic
AGACCCTTGACACAGTAATT+AGG 0.340828 3_4:-65070960 None:intergenic
ATTGGACACCTTAACTCTTC+TGG 0.343448 3_4:-65070798 None:intergenic
CATATCTATTACACCTTATG+AGG 0.343954 3_4:+65070574 Msa0514380:CDS
TACCACTCCCTTCTTCGTTA+TGG 0.347904 3_4:-65068001 None:intergenic
CTCTGACGATAATGATTCTC+AGG 0.348834 3_4:+65070626 Msa0514380:CDS
TCGGGAGGGCCTTCAGGAAT+AGG 0.351205 3_4:-65071014 None:intergenic
CTATCTTAGTTCTAAGCATC+TGG 0.352694 3_4:-65071981 None:intergenic
TGTTCTCCTAACGGTGTTCC+TGG 0.353439 3_4:+65070681 Msa0514380:CDS
AGCGGGAATCTTATTGTTGT+TGG 0.368955 3_4:+65071840 Msa0514380:CDS
ATCCATCGGAGAAGCAAGTT+GGG 0.372098 3_4:+65070352 Msa0514380:CDS
ATCAATATCTAGAAGAAAAG+TGG 0.372201 3_4:+65072530 Msa0514380:CDS
AGGAACACCGTTAGGAGAAC+AGG 0.373022 3_4:-65070679 None:intergenic
CGGGAGGGCCTTCAGGAATA+GGG 0.376166 3_4:-65071013 None:intergenic
TAGGAGCAAATCTGGAATTC+AGG 0.377997 3_4:+65069564 Msa0514380:CDS
AGATCTTGAATTAATGGATT+CGG 0.382557 3_4:-65071078 None:intergenic
GGCAAGAAAGATTAAGATAC+AGG 0.384259 3_4:-65071906 None:intergenic
GTAGTTAAAATCAAGAGATT+CGG 0.389468 3_4:-65071033 None:intergenic
CAGTCCATGTGCACTCGGCC+TGG 0.398858 3_4:-65072122 None:intergenic
TCTTTCGGTGAGAGCTGCTC+TGG 0.402905 3_4:-65070484 None:intergenic
ATTTCGAACCTCCTTTCATC+TGG 0.404783 3_4:+65072066 Msa0514380:CDS
CTCATAAGTTGCAGTGAGAT+TGG 0.407455 3_4:-65070816 None:intergenic
TTCCTTCCTCTTGTCTTCCT+CGG 0.407768 3_4:-65070541 None:intergenic
GCTAGGCCTAGGAGCAAATC+TGG 0.409332 3_4:+65069556 Msa0514380:CDS
ACTTGGAGTATTTCCTCATA+AGG 0.409738 3_4:-65070587 None:intergenic
TTGGTGTCGATAACGGTAAA+TGG 0.410141 3_4:+65072357 Msa0514380:CDS
TATTGACTGAAGGGAACAAT+TGG 0.414453 3_4:+65071252 Msa0514380:CDS
GCATATGATTGGCGCGAGTC+AGG 0.417898 3_4:+65071942 Msa0514380:CDS
TAGTTAAAATCAAGAGATTC+GGG 0.419321 3_4:-65071032 None:intergenic
TGCCCAGAAGCAATTATAAC+AGG 0.419483 3_4:-65070843 None:intergenic
CATATGGCTGCTACTAGACT+TGG 0.431079 3_4:+65070450 Msa0514380:CDS
ACCTGTTGTTATTCACAGCC+AGG 0.434787 3_4:-65071448 None:intergenic
CTTTAGAAGCTGCTAGGCCT+AGG 0.436781 3_4:+65069545 Msa0514380:CDS
TTGGCTTCTATACTCGATAC+TGG 0.437220 3_4:+65072231 Msa0514380:CDS
CCCTTCCACCAGAAGAGTTA+AGG 0.438582 3_4:+65070790 Msa0514380:CDS
ATTTCTTTCCTGGTTAACTC+TGG 0.440038 3_4:+65068963 Msa0514380:five_prime_UTR
TCATATGCTTGGCTTCTTCA+AGG 0.441314 3_4:-65071927 None:intergenic
TGAATTCCAGATTTGCTCCT+AGG 0.442701 3_4:-65069562 None:intergenic
GGCCTACAATCCCTTCTTGT+AGG 0.443118 3_4:+65072099 Msa0514380:CDS
AAAAGCTCATTGAAAGGGCT+CGG 0.443856 3_4:+65070517 Msa0514380:CDS
CTTTCATCTGGCATCATCAA+TGG 0.452625 3_4:+65072078 Msa0514380:CDS
TCACATCCACTGTGTAAACT+TGG 0.455338 3_4:-65069009 None:intergenic
GGGTTAGATTTACTTTATGA+AGG 0.457885 3_4:+65072748 Msa0514380:three_prime_UTR
CACCTGATACCCAATGGATT+GGG 0.458315 3_4:-65069934 None:intergenic
GGCCTACAAGAAGGGATTGT+AGG 0.460000 3_4:-65072101 None:intergenic
TGTCAACTCTTGCAAATTGA+AGG 0.462428 3_4:+65071109 Msa0514380:CDS
TCACCTGATACCCAATGGAT+TGG 0.465567 3_4:-65069935 None:intergenic
CAAAGAGAAAGAAGAAGGAA+GGG 0.470186 3_4:-65068055 None:intergenic
TTTAATTGCATTGCTTCAGC+AGG 0.472486 3_4:+65070380 Msa0514380:CDS
TTGCCTTCTCTAATGCTACA+TGG 0.472829 3_4:-65069600 None:intergenic
TCAAGGGTCTTGTGGCTAGT+TGG 0.473556 3_4:+65070973 Msa0514380:CDS
CATTGAAAGGGCTCGGGCCG+AGG 0.475113 3_4:+65070524 Msa0514380:CDS
AAGGAGGTTCGAAATATTTG+AGG 0.475492 3_4:-65072058 None:intergenic
AGCTTTCTCTCTTCCTCTTG+AGG 0.476772 3_4:-65072382 None:intergenic
ATCCTGTTATAATTGCTTCT+GGG 0.478869 3_4:+65070841 Msa0514380:CDS
TGAAGGGAATGCGATGGCTC+TGG 0.479282 3_4:+65071400 Msa0514380:CDS
ACCTGCATTGGTGTCGATAA+CGG 0.481562 3_4:+65072350 Msa0514380:CDS
AGAGTGTAGTAAACTTTACT+TGG 0.482086 3_4:+65069645 Msa0514380:CDS
ATGGACAAATCACCAGCTTC+AGG 0.486486 3_4:-65072477 None:intergenic
ACCTGGCTGTGAATAACAAC+AGG 0.486719 3_4:+65071447 Msa0514380:CDS
GGCCTAGCAGCTTCTAAAGA+AGG 0.487761 3_4:-65069541 None:intergenic
GGTGTTCGCGCTTGATCCAT+CGG 0.488706 3_4:+65070338 Msa0514380:CDS
GACAACAAAGAGAAAGAAGA+AGG 0.489402 3_4:-65068060 None:intergenic
AGTTTGTTTATCACCCCAAA+AGG 0.490436 3_4:+65068924 Msa0514380:five_prime_UTR
TCAATATCTAGAAGAAAAGT+GGG 0.493028 3_4:+65072531 Msa0514380:CDS
GACTCCTAATTACTGTGTCA+AGG 0.493971 3_4:+65070956 Msa0514380:CDS
TTCAATCAGCTGTGCATGAA+GGG 0.495086 3_4:+65071384 Msa0514380:CDS
GAAGAAGCCAAGCATATGAT+TGG 0.495427 3_4:+65071931 Msa0514380:CDS
TGAAGGTTAATTATGTCTCA+TGG 0.495843 3_4:+65072765 Msa0514380:three_prime_UTR
AACTGAAAGTTTCTCTGCAC+AGG 0.499218 3_4:+65071190 Msa0514380:CDS
TGACCACCAGGAACACCGTT+AGG 0.499925 3_4:-65070687 None:intergenic
ACAATCCCTTCTTGTAGGCC+AGG 0.505846 3_4:+65072104 Msa0514380:CDS
GATATCGTTTCCCAATCCAT+TGG 0.505853 3_4:+65069924 Msa0514380:CDS
GGGAATCTTATTGTTGTTGG+AGG 0.506368 3_4:+65071843 Msa0514380:CDS
AAGTTTCTCTGCACAGGAAG+AGG 0.506520 3_4:+65071196 Msa0514380:CDS
GGTTGCACAACTGTACGAAC+TGG 0.507436 3_4:-65071881 None:intergenic
CTGAAGGGAACAATTGGAAA+AGG 0.507980 3_4:+65071258 Msa0514380:CDS
ACTATCTACAAGAGCACACT+TGG 0.508563 3_4:-65069886 None:intergenic
ATATCGTTTCCCAATCCATT+GGG 0.508721 3_4:+65069925 Msa0514380:CDS
TTCCTTCTTTAGAAGCTGCT+AGG 0.509891 3_4:+65069539 Msa0514380:CDS
GATCCATCGGAGAAGCAAGT+TGG 0.509964 3_4:+65070351 Msa0514380:CDS
AGCTATGGCTTTGTTCAACC+TGG 0.511226 3_4:+65071430 Msa0514380:CDS
GGCTCTGGAAAATGGAGCTA+TGG 0.513164 3_4:+65071415 Msa0514380:CDS
ACAAAGAGAAAGAAGAAGGA+AGG 0.514704 3_4:-65068056 None:intergenic
GTTCGAAATATTTGAGGGTA+CGG 0.515826 3_4:-65072052 None:intergenic
GAAATTGTGAACGAAATTGC+TGG 0.517972 3_4:+65070312 Msa0514380:CDS
AAATCGATGAAGAGTTGTAC+AGG 0.519390 3_4:+65072699 Msa0514380:three_prime_UTR
CTTAACTCTTCTGGTGGAAG+GGG 0.519730 3_4:-65070789 None:intergenic
TAGAAATATTATAGAGTGCA+TGG 0.521501 3_4:-65072029 None:intergenic
GAACTCACTTCTAAATAACT+TGG 0.521658 3_4:-65070604 None:intergenic
TGAATCCATAGAGCAGGAAC+AGG 0.522480 3_4:+65072254 Msa0514380:CDS
ACCGTTATCGACACCAATGC+AGG 0.523119 3_4:-65072351 None:intergenic
CTTCAATCAGCTGTGCATGA+AGG 0.527604 3_4:+65071383 Msa0514380:CDS
TGTGAACGAAATTGCTGGTA+TGG 0.529173 3_4:+65070317 Msa0514380:CDS
TCCCCAACTTGCTTCTCCGA+TGG 0.529174 3_4:-65070354 None:intergenic
AGAAGGCGCTATACCTGCAT+TGG 0.529236 3_4:+65072338 Msa0514380:CDS
GGAGGGCATCTAGCTTGCAC+TGG 0.536740 3_4:-65072008 None:intergenic
AAGGAACTTATGATATCAGC+GGG 0.537409 3_4:+65071823 Msa0514380:CDS
CTTGAGTATTAGCAGGTGAA+TGG 0.537754 3_4:-65072446 None:intergenic
TGTTCTTCTCAAATTTGAGA+AGG 0.538082 3_4:+65069863 Msa0514380:CDS
TACTGGTGAATCCATAGAGC+AGG 0.538693 3_4:+65072248 Msa0514380:CDS
ACCTTAACTCTTCTGGTGGA+AGG 0.539234 3_4:-65070791 None:intergenic
CCTTAACTCTTCTGGTGGAA+GGG 0.540738 3_4:-65070790 None:intergenic
ACTCGCGCCAATCATATGCT+TGG 0.541045 3_4:-65071938 None:intergenic
TTAATTATGTCTCATGGTGA+AGG 0.542091 3_4:+65072771 Msa0514380:three_prime_UTR
AGGAGGTTCGAAATATTTGA+GGG 0.542098 3_4:-65072057 None:intergenic
TTACTGAAAGTATTGACTGA+AGG 0.542170 3_4:+65071242 Msa0514380:CDS
GACAGACAGATATCAAAACT+TGG 0.543724 3_4:+65070723 Msa0514380:CDS
TGCGGGATGATGAGGAAGCC+AGG 0.543724 3_4:+65071315 Msa0514380:CDS
TTACTGTGTCAAGGGTCTTG+TGG 0.545164 3_4:+65070965 Msa0514380:CDS
AAGATACTATTCTCTTCAAG+TGG 0.546589 3_4:-65071146 None:intergenic
ACTCTTGCTGCGGGATGATG+AGG 0.548466 3_4:+65071307 Msa0514380:CDS
TCTTGTAGATAGTCTTAAGC+TGG 0.548696 3_4:+65069896 Msa0514380:CDS
ACTCCTAATTACTGTGTCAA+GGG 0.549503 3_4:+65070957 Msa0514380:CDS
CAAGACTGTTCACCTGAAGC+TGG 0.549576 3_4:+65072465 Msa0514380:CDS
GAACAGTCTTGAGTATTAGC+AGG 0.549829 3_4:-65072453 None:intergenic
TACTGAAAGTATTGACTGAA+GGG 0.550209 3_4:+65071243 Msa0514380:CDS
GTGAATGATGGATGTTTCTG+AGG 0.552079 3_4:+65069028 Msa0514380:exon
AAAGCTCATTGAAAGGGCTC+GGG 0.552108 3_4:+65070518 Msa0514380:CDS
ACTCGGCCTGGCCTACAAGA+AGG 0.553965 3_4:-65072110 None:intergenic
CTCGGCCTGGCCTACAAGAA+GGG 0.554617 3_4:-65072109 None:intergenic
AATTGTATCCAGAGTTAACC+AGG 0.557865 3_4:-65068971 None:intergenic
TAGGCCAGGCCGAGTGCACA+TGG 0.558691 3_4:+65072118 Msa0514380:CDS
CTTTGCTGCAAGCGACGCCA+AGG 0.558758 3_4:+65069064 Msa0514380:CDS
TTCTGTTGCATAATATTAGG+AGG 0.562080 3_4:-65072287 None:intergenic
CATTGATGATGCCAGATGAA+AGG 0.566584 3_4:-65072077 None:intergenic
TTGGAAAAGGAAGTGTAAAG+TGG 0.568418 3_4:+65071271 Msa0514380:CDS
TCAGAGACAGGGAGGCATTG+AGG 0.569758 3_4:-65068120 None:intergenic
TTACATTCTAAAACTAACAC+TGG 0.571912 3_4:-65072599 None:intergenic
GCGGTTAAGACTCTTGCTGC+GGG 0.572400 3_4:+65071298 Msa0514380:CDS
ACGGTAAATGGTACCTCAAG+AGG 0.573203 3_4:+65072369 Msa0514380:CDS
GGAGAACAGGGTTGAACGGT+CGG 0.574708 3_4:-65070666 None:intergenic
CGCCATAACGAAGAAGGGAG+TGG 0.575040 3_4:+65067999 Msa0514380:five_prime_UTR
GGTTGAACGGTCGGAGAACA+CGG 0.575209 3_4:-65070657 None:intergenic
TTTAGAATGTAAATCTTCTG+GGG 0.576754 3_4:+65072610 Msa0514380:three_prime_UTR
CACATCCACTGTGTAAACTT+GGG 0.591096 3_4:-65069008 None:intergenic
TGTAGATAGTCTTAAGCTGG+TGG 0.591987 3_4:+65069899 Msa0514380:CDS
CTCGGGCCGAGGAAGACAAG+AGG 0.595272 3_4:+65070535 Msa0514380:CDS
AATATTATAGAGTGCATGGA+GGG 0.595762 3_4:-65072025 None:intergenic
TACATGAGAACATGAGTGAG+AGG 0.600439 3_4:-65072651 None:intergenic
GTCAACTCTTGCAAATTGAA+GGG 0.601669 3_4:+65071110 Msa0514380:CDS
GTTCAACCCTGTTCTCCTAA+CGG 0.602337 3_4:+65070672 Msa0514380:CDS
GCTAGTTGGTGTGAACAGAA+TGG 0.603949 3_4:+65070987 Msa0514380:CDS
TAATTATGTCTCATGGTGAA+GGG 0.604788 3_4:+65072772 Msa0514380:three_prime_UTR
TACACAGTGGATGTGAATGA+TGG 0.605616 3_4:+65069016 Msa0514380:exon
GGACACCTTAACTCTTCTGG+TGG 0.612767 3_4:-65070795 None:intergenic
GGCCGAGGAAGACAAGAGGA+AGG 0.616588 3_4:+65070539 Msa0514380:CDS
AGTTATCACCTGATACCCAA+TGG 0.616768 3_4:-65069940 None:intergenic
TATGATGCAGGCTATAACAG+GGG 0.618070 3_4:+65069836 Msa0514380:intron
AATGGAATCCCTATTCCTGA+AGG 0.621708 3_4:+65071005 Msa0514380:CDS
GGAAGTGTAAAGTGGTAGAG+CGG 0.621993 3_4:+65071279 Msa0514380:CDS
GTTAGGAGAACAGGGTTGAA+CGG 0.621994 3_4:-65070670 None:intergenic
AGCGGTTAAGACTCTTGCTG+CGG 0.626625 3_4:+65071297 Msa0514380:CDS
AGTTTCTCACGAAGGAAGAG+AGG 0.626772 3_4:+65072176 Msa0514380:CDS
ACTCCATGTAGCATTAGAGA+AGG 0.627978 3_4:+65069597 Msa0514380:CDS
TCCTGAACTGATAAGCACAT+TGG 0.627995 3_4:+65072212 Msa0514380:CDS
TAAGGAACTTATGATATCAG+CGG 0.636604 3_4:+65071822 Msa0514380:CDS
TTATGATGCAGGCTATAACA+GGG 0.636961 3_4:+65069835 Msa0514380:intron
ACATGAGAACATGAGTGAGA+GGG 0.637519 3_4:-65072650 None:intergenic
TTAGAATGTAAATCTTCTGG+GGG 0.639542 3_4:+65072611 Msa0514380:three_prime_UTR
TCTGACGATAATGATTCTCA+GGG 0.646208 3_4:+65070627 Msa0514380:CDS
TAAAATCAAGAGATTCGGGA+GGG 0.649038 3_4:-65071028 None:intergenic
AAGGCTTGACAATGACCACC+AGG 0.649299 3_4:-65070699 None:intergenic
TGTGAGATGGTCCTGCAAGA+AGG 0.657222 3_4:+65072321 Msa0514380:CDS
AGTATCTTAGAGCAAACTGA+GGG 0.661802 3_4:+65071161 Msa0514380:CDS
TGATGATGCCAGATGAAAGG+AGG 0.668797 3_4:-65072074 None:intergenic
AAGTGAGAAATGTTGTGAGA+TGG 0.668842 3_4:+65072308 Msa0514380:CDS
GCAAGAAAGATTAAGATACA+GGG 0.669005 3_4:-65071905 None:intergenic
TCCATCGGAGAAGCAAGTTG+GGG 0.670384 3_4:+65070353 Msa0514380:CDS
TCTCCTAACGGTGTTCCTGG+TGG 0.681050 3_4:+65070684 Msa0514380:CDS
AATTTGGCAGTTTCTCACGA+AGG 0.684055 3_4:+65072168 Msa0514380:CDS
TAGTATCTTAGAGCAAACTG+AGG 0.684801 3_4:+65071160 Msa0514380:CDS
GGAACACCGTTAGGAGAACA+GGG 0.688964 3_4:-65070678 None:intergenic
TTTGTGTTTCAGAGACAGGG+AGG 0.690745 3_4:-65068128 None:intergenic
TTAAAATCAAGAGATTCGGG+AGG 0.702059 3_4:-65071029 None:intergenic
TGTGCATGAAGGGAATGCGA+TGG 0.707631 3_4:+65071394 Msa0514380:CDS
CATCTGGATTAGGAACTGCA+CGG 0.722411 3_4:-65071965 None:intergenic
AAATATTATAGAGTGCATGG+AGG 0.725341 3_4:-65072026 None:intergenic
CAATATCTAGAAGAAAAGTG+GGG 0.738940 3_4:+65072532 Msa0514380:CDS
GAATTGTTGAGAAGACAGAG+AGG 0.751412 3_4:-65068082 None:intergenic
AGAAAGATTAAGATACAGGG+CGG 0.756821 3_4:-65071902 None:intergenic
TAGGACCCAAGTTTACACAG+TGG 0.757198 3_4:+65069003 Msa0514380:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTATTACTCTTTAATA+AGG + chr3_4:65068689-65068708 Msa0514380:intron 10.0%
!! TATTTATTACTCTTTAATAA+GGG + chr3_4:65068690-65068709 Msa0514380:intron 10.0%
!!! GTATGAAATAAATTTTTTAA+TGG + chr3_4:65069086-65069105 Msa0514380:intron 10.0%
!!! GTAATTTATTGAATTTATTT+TGG + chr3_4:65072727-65072746 Msa0514380:three_prime_UTR 10.0%
!! AAAAATTAAATAGAAAGTTA+TGG - chr3_4:65072841-65072860 None:intergenic 10.0%
!!! ATATGGATTTTATTAGAAAT+GGG - chr3_4:65067955-65067974 None:intergenic 15.0%
!!! TATATGGATTTTATTAGAAA+TGG - chr3_4:65067956-65067975 None:intergenic 15.0%
!! TAATTATTAATTTCTATTGC+TGG + chr3_4:65068331-65068350 Msa0514380:intron 15.0%
!!! TGGTTTTAAATAAAATGTAT+TGG + chr3_4:65068393-65068412 Msa0514380:intron 15.0%
!! TAAATGTTTAGATATAATGA+TGG + chr3_4:65068855-65068874 Msa0514380:intron 15.0%
!! AAAAAATTTATTTCATACCT+TGG - chr3_4:65069084-65069103 None:intergenic 15.0%
!! TGGTATAAAACTATAAATTA+AGG + chr3_4:65069183-65069202 Msa0514380:intron 15.0%
!! AATAAAACTTACATACTAAA+TGG - chr3_4:65069714-65069733 None:intergenic 15.0%
!! AATTAATTCAGAGAATAAAT+AGG - chr3_4:65070107-65070126 None:intergenic 15.0%
!!! TTTGTTAGGTTTAAAATTAA+AGG - chr3_4:65070751-65070770 None:intergenic 15.0%
!! AGAATGAAAATTCAGAAAAA+TGG - chr3_4:65068194-65068213 None:intergenic 20.0%
!!! ACATTAATTTTTTCCTTCAA+TGG + chr3_4:65068452-65068471 Msa0514380:intron 20.0%
!!! TTATCTTATTTTTCTACTGA+AGG + chr3_4:65068799-65068818 Msa0514380:intron 20.0%
!! TTTAGATATAATGATGGTAT+TGG + chr3_4:65068861-65068880 Msa0514380:intron 20.0%
!!! TTTTTGTTTTAATTCTAAGC+AGG + chr3_4:65068894-65068913 Msa0514380:intron 20.0%
!!! AAGAAATCAACTTATAGTTT+TGG - chr3_4:65068950-65068969 None:intergenic 20.0%
!!! AACATAAGAAAAAAAGTATG+AGG - chr3_4:65069752-65069771 None:intergenic 20.0%
!!! TCATACTTTTTTTCTTATGT+TGG + chr3_4:65069751-65069770 Msa0514380:intron 20.0%
!! TTCATTATCTTGTTCAATTA+AGG + chr3_4:65070027-65070046 Msa0514380:intron 20.0%
!! TTTAAAAAAGCTCATTGAAA+GGG + chr3_4:65070512-65070531 Msa0514380:CDS 20.0%
!! AATAAAAGTTGCAATTCAAT+AGG - chr3_4:65071631-65071650 None:intergenic 20.0%
!!! TTGAATTGCAACTTTTATTT+AGG + chr3_4:65071632-65071651 Msa0514380:intron 20.0%
!! CCTAATTCAGAAATAATTAT+TGG - chr3_4:65071713-65071732 None:intergenic 20.0%
!!! CCAATAATTATTTCTGAATT+AGG + chr3_4:65071710-65071729 Msa0514380:intron 20.0%
!!! TTATTTCTGAATTAGGATAA+TGG + chr3_4:65071717-65071736 Msa0514380:intron 20.0%
!!! TTTTAGAATGTAAATCTTCT+GGG + chr3_4:65072609-65072628 Msa0514380:three_prime_UTR 20.0%
!!! ATTCTCATTTTCTATATTTG+AGG + chr3_4:65072866-65072885 Msa0514380:three_prime_UTR 20.0%
! ATAGGAAAAATATGCAGATT+TGG - chr3_4:65068031-65068050 None:intergenic 25.0%
!! TTCTGAATTTTCATTCTCAT+TGG + chr3_4:65068197-65068216 Msa0514380:five_prime_UTR 25.0%
! TTCAGATTAGAAGATGATTA+GGG - chr3_4:65068286-65068305 None:intergenic 25.0%
! TTTCAGATTAGAAGATGATT+AGG - chr3_4:65068287-65068306 None:intergenic 25.0%
! TTATTAATTTCTATTGCTGG+AGG + chr3_4:65068334-65068353 Msa0514380:intron 25.0%
!! AATTGAACATTTTCCATTGA+AGG - chr3_4:65068468-65068487 None:intergenic 25.0%
! AGGATTAAACACAAAAAAGT+GGG - chr3_4:65068507-65068526 None:intergenic 25.0%
! AAGGATTAAACACAAAAAAG+TGG - chr3_4:65068508-65068527 None:intergenic 25.0%
!!! ACTTTTTTGTGTTTAATCCT+TGG + chr3_4:65068507-65068526 Msa0514380:intron 25.0%
! TGTTTAATCCTTGGTTTAAA+CGG + chr3_4:65068516-65068535 Msa0514380:intron 25.0%
! AAATGACATCATCAAAAGAA+AGG - chr3_4:65068581-65068600 None:intergenic 25.0%
!! TGAATTTTTAATCATTTCCG+TGG + chr3_4:65068613-65068632 Msa0514380:intron 25.0%
!!! TAGTTTTATACCATTGCATA+AGG - chr3_4:65069176-65069195 None:intergenic 25.0%
!! TTTGCTCTATTTTCTTAGTT+TGG - chr3_4:65069303-65069322 None:intergenic 25.0%
!!! TTTTGTTTTTGGTGAAATGT+TGG + chr3_4:65069387-65069406 Msa0514380:intron 25.0%
!!! ACTTTTTTTCTTATGTTGGT+TGG + chr3_4:65069755-65069774 Msa0514380:intron 25.0%
! ATCAAACACGAAATTAACAA+AGG - chr3_4:65070068-65070087 None:intergenic 25.0%
! TATGGTATATTTGCTTATCA+TGG + chr3_4:65070217-65070236 Msa0514380:intron 25.0%
!!! CTTTTTTAAAGCTCTTCTTT+CGG - chr3_4:65070502-65070521 None:intergenic 25.0%
!! CTTTAAAAAAGCTCATTGAA+AGG + chr3_4:65070511-65070530 Msa0514380:CDS 25.0%
! AAACCTAACAAAAAGAAATC+AGG + chr3_4:65070759-65070778 Msa0514380:CDS 25.0%
! AAAGAGCTTGTATAGAAAAA+TGG + chr3_4:65070874-65070893 Msa0514380:CDS 25.0%
! ATAGAAAAATGGTTCAATGA+TGG + chr3_4:65070885-65070904 Msa0514380:CDS 25.0%
! TAGTTAAAATCAAGAGATTC+GGG - chr3_4:65071035-65071054 None:intergenic 25.0%
! GTAGTTAAAATCAAGAGATT+CGG - chr3_4:65071036-65071055 None:intergenic 25.0%
!!! AATCTCTTGATTTTAACTAC+TGG + chr3_4:65071036-65071055 Msa0514380:CDS 25.0%
!!! AGATCTTGAATTAATGGATT+CGG - chr3_4:65071081-65071100 None:intergenic 25.0%
! GTTTACAGATCTTGAATTAA+TGG - chr3_4:65071087-65071106 None:intergenic 25.0%
!! CTTTTTCTTCAACAGAAATA+AGG + chr3_4:65071804-65071823 Msa0514380:intron 25.0%
! TAGAAATATTATAGAGTGCA+TGG - chr3_4:65072032-65072051 None:intergenic 25.0%
!!! CTAGATATTGATTTACTTAG+AGG - chr3_4:65072522-65072541 None:intergenic 25.0%
! ATCAATATCTAGAAGAAAAG+TGG + chr3_4:65072530-65072549 Msa0514380:CDS 25.0%
! TCAATATCTAGAAGAAAAGT+GGG + chr3_4:65072531-65072550 Msa0514380:CDS 25.0%
!!! TTACATTCTAAAACTAACAC+TGG - chr3_4:65072602-65072621 None:intergenic 25.0%
!!! GTTTTAGAATGTAAATCTTC+TGG + chr3_4:65072608-65072627 Msa0514380:exon 25.0%
!! TTTAGAATGTAAATCTTCTG+GGG + chr3_4:65072610-65072629 Msa0514380:three_prime_UTR 25.0%
! AAATGGCACTGAAAAAATTG+AGG - chr3_4:65068177-65068196 None:intergenic 30.0%
!!! TCTTCTCTCTTCTTTTTTTG+CGG + chr3_4:65068242-65068261 Msa0514380:five_prime_UTR 30.0%
AAACACTAATCAGAAAGTGA+TGG + chr3_4:65068666-65068685 Msa0514380:intron 30.0%
AAAATTAGCTCAGATCATAG+AGG - chr3_4:65068732-65068751 None:intergenic 30.0%
!! GATCTGAGCTAATTTTGTTT+TGG + chr3_4:65068736-65068755 Msa0514380:intron 30.0%
!!! TCTTATTTTTCTACTGAAGG+AGG + chr3_4:65068802-65068821 Msa0514380:intron 30.0%
!!! ACTTATAGTTTTGGCCTTTT+GGG - chr3_4:65068941-65068960 None:intergenic 30.0%
!!! AACTTATAGTTTTGGCCTTT+TGG - chr3_4:65068942-65068961 None:intergenic 30.0%
!! CTATAAGTTGATTTCTTTCC+TGG + chr3_4:65068953-65068972 Msa0514380:five_prime_UTR 30.0%
GGATACAATTGAGATCATTT+AGG + chr3_4:65068984-65069003 Msa0514380:five_prime_UTR 30.0%
!! GTTGCTCGTTATTATTTTGT+CGG + chr3_4:65069118-65069137 Msa0514380:intron 30.0%
!!! TTCTGTTGGACTTTTGTTTT+TGG + chr3_4:65069376-65069395 Msa0514380:intron 30.0%
AGAGTGTAGTAAACTTTACT+TGG + chr3_4:65069645-65069664 Msa0514380:CDS 30.0%
! AATAGCTTTACTTATGATGC+AGG + chr3_4:65069824-65069843 Msa0514380:intron 30.0%
TGTTCTTCTCAAATTTGAGA+AGG + chr3_4:65069863-65069882 Msa0514380:CDS 30.0%
GACTTATGCTAATATGTGAA+TGG + chr3_4:65070185-65070204 Msa0514380:intron 30.0%
AATTTCATCAATCTGAACAG+AGG - chr3_4:65070298-65070317 None:intergenic 30.0%
! TGAACTTGAGTGTTTTCATA+TGG + chr3_4:65070434-65070453 Msa0514380:CDS 30.0%
CATATCTATTACACCTTATG+AGG + chr3_4:65070574-65070593 Msa0514380:CDS 30.0%
GAACTCACTTCTAAATAACT+TGG - chr3_4:65070607-65070626 None:intergenic 30.0%
! TTTTGATATCTGTCTGTCAA+AGG - chr3_4:65070721-65070740 None:intergenic 30.0%
! TGACCTGATTTCTTTTTGTT+AGG - chr3_4:65070765-65070784 None:intergenic 30.0%
ATCCTGTTATAATTGCTTCT+GGG + chr3_4:65070841-65070860 Msa0514380:CDS 30.0%
! CAAGTTTCTGTTGAGTTTTT+GGG - chr3_4:65070923-65070942 None:intergenic 30.0%
!!! TGATTTTAACTACTGGAGAT+TGG + chr3_4:65071043-65071062 Msa0514380:CDS 30.0%
AAGATACTATTCTCTTCAAG+TGG - chr3_4:65071149-65071168 None:intergenic 30.0%
!! TTACTGAAAGTATTGACTGA+AGG + chr3_4:65071242-65071261 Msa0514380:CDS 30.0%
!! TACTGAAAGTATTGACTGAA+GGG + chr3_4:65071243-65071262 Msa0514380:CDS 30.0%
TCTTTAGTCCAGTTTAACAT+TGG - chr3_4:65071663-65071682 None:intergenic 30.0%
TAAGGAACTTATGATATCAG+CGG + chr3_4:65071822-65071841 Msa0514380:CDS 30.0%
GCAAGAAAGATTAAGATACA+GGG - chr3_4:65071908-65071927 None:intergenic 30.0%
AATATTATAGAGTGCATGGA+GGG - chr3_4:65072028-65072047 None:intergenic 30.0%
AAATATTATAGAGTGCATGG+AGG - chr3_4:65072029-65072048 None:intergenic 30.0%
! TGAAAAATGCATAGCTGTTT+TGG + chr3_4:65072143-65072162 Msa0514380:CDS 30.0%
TTCTGTTGCATAATATTAGG+AGG - chr3_4:65072290-65072309 None:intergenic 30.0%
CACTTCTGTTGCATAATATT+AGG - chr3_4:65072293-65072312 None:intergenic 30.0%
CAATATCTAGAAGAAAAGTG+GGG + chr3_4:65072532-65072551 Msa0514380:CDS 30.0%
TTAGAATGTAAATCTTCTGG+GGG + chr3_4:65072611-65072630 Msa0514380:three_prime_UTR 30.0%
GGGTTAGATTTACTTTATGA+AGG + chr3_4:65072748-65072767 Msa0514380:three_prime_UTR 30.0%
TGAAGGTTAATTATGTCTCA+TGG + chr3_4:65072765-65072784 Msa0514380:three_prime_UTR 30.0%
TTAATTATGTCTCATGGTGA+AGG + chr3_4:65072771-65072790 Msa0514380:three_prime_UTR 30.0%
TAATTATGTCTCATGGTGAA+GGG + chr3_4:65072772-65072791 Msa0514380:three_prime_UTR 30.0%
TTACTAGCTAAGCAAGAATT+AGG - chr3_4:65072803-65072822 None:intergenic 30.0%
! ATTTTACGCCATAACGAAGA+AGG + chr3_4:65067993-65068012 Msa0514380:five_prime_UTR 35.0%
! TTTTACGCCATAACGAAGAA+GGG + chr3_4:65067994-65068013 Msa0514380:five_prime_UTR 35.0%
CAAAGAGAAAGAAGAAGGAA+GGG - chr3_4:65068058-65068077 None:intergenic 35.0%
ACAAAGAGAAAGAAGAAGGA+AGG - chr3_4:65068059-65068078 None:intergenic 35.0%
GACAACAAAGAGAAAGAAGA+AGG - chr3_4:65068063-65068082 None:intergenic 35.0%
! GTTTTTGTGTTTCAGAGACA+GGG - chr3_4:65068134-65068153 None:intergenic 35.0%
! AGTTTTTGTGTTTCAGAGAC+AGG - chr3_4:65068135-65068154 None:intergenic 35.0%
!!! CTTCTCTCTTCTTTTTTTGC+GGG + chr3_4:65068243-65068262 Msa0514380:five_prime_UTR 35.0%
!!! ATGATTAGGGTTTTGAAGGA+AGG - chr3_4:65068273-65068292 None:intergenic 35.0%
!! GAAGATGATTAGGGTTTTGA+AGG - chr3_4:65068277-65068296 None:intergenic 35.0%
TTTGTGACATTGTCTTAGCT+GGG + chr3_4:65068365-65068384 Msa0514380:intron 35.0%
ATTGTCTTAGCTGGGAATTA+TGG + chr3_4:65068373-65068392 Msa0514380:intron 35.0%
! AGTTTGTTTATCACCCCAAA+AGG + chr3_4:65068924-65068943 Msa0514380:five_prime_UTR 35.0%
!!! CTTATAGTTTTGGCCTTTTG+GGG - chr3_4:65068940-65068959 None:intergenic 35.0%
ATTTCTTTCCTGGTTAACTC+TGG + chr3_4:65068963-65068982 Msa0514380:five_prime_UTR 35.0%
AATTGTATCCAGAGTTAACC+AGG - chr3_4:65068974-65068993 None:intergenic 35.0%
!! CGTTATTATTTTGTCGGTGA+CGG + chr3_4:65069124-65069143 Msa0514380:intron 35.0%
!! GTTATTATTTTGTCGGTGAC+GGG + chr3_4:65069125-65069144 Msa0514380:intron 35.0%
TGTGAAACAATGGTCAGAAA+AGG - chr3_4:65069356-65069375 None:intergenic 35.0%
ACCATTGTTTCACATTCTGT+TGG + chr3_4:65069362-65069381 Msa0514380:intron 35.0%
TCCAACAGAATGTGAAACAA+TGG - chr3_4:65069366-65069385 None:intergenic 35.0%
TTATGATGCAGGCTATAACA+GGG + chr3_4:65069835-65069854 Msa0514380:intron 35.0%
! TCTTGTAGATAGTCTTAAGC+TGG + chr3_4:65069896-65069915 Msa0514380:CDS 35.0%
ATATCGTTTCCCAATCCATT+GGG + chr3_4:65069925-65069944 Msa0514380:CDS 35.0%
GGTGATAACTTTCAACGATA+TGG + chr3_4:65069953-65069972 Msa0514380:intron 35.0%
AAACCAGAATATAGCAAACG+AGG - chr3_4:65070153-65070172 None:intergenic 35.0%
GAAATTGTGAACGAAATTGC+TGG + chr3_4:65070312-65070331 Msa0514380:CDS 35.0%
TTTAATTGCATTGCTTCAGC+AGG + chr3_4:65070380-65070399 Msa0514380:CDS 35.0%
! ACTTGGAGTATTTCCTCATA+AGG - chr3_4:65070590-65070609 None:intergenic 35.0%
TCTGACGATAATGATTCTCA+GGG + chr3_4:65070627-65070646 Msa0514380:CDS 35.0%
GACAGACAGATATCAAAACT+TGG + chr3_4:65070723-65070742 Msa0514380:CDS 35.0%
GATCCTGTTATAATTGCTTC+TGG + chr3_4:65070840-65070859 Msa0514380:CDS 35.0%
! GCAAGTTTCTGTTGAGTTTT+TGG - chr3_4:65070924-65070943 None:intergenic 35.0%
ACTCCTAATTACTGTGTCAA+GGG + chr3_4:65070957-65070976 Msa0514380:CDS 35.0%
TAAAATCAAGAGATTCGGGA+GGG - chr3_4:65071031-65071050 None:intergenic 35.0%
TTAAAATCAAGAGATTCGGG+AGG - chr3_4:65071032-65071051 None:intergenic 35.0%
TGTCAACTCTTGCAAATTGA+AGG + chr3_4:65071109-65071128 Msa0514380:CDS 35.0%
GTCAACTCTTGCAAATTGAA+GGG + chr3_4:65071110-65071129 Msa0514380:CDS 35.0%
TAGTATCTTAGAGCAAACTG+AGG + chr3_4:65071160-65071179 Msa0514380:CDS 35.0%
AGTATCTTAGAGCAAACTGA+GGG + chr3_4:65071161-65071180 Msa0514380:CDS 35.0%
! TATTGACTGAAGGGAACAAT+TGG + chr3_4:65071252-65071271 Msa0514380:CDS 35.0%
! TTGGAAAAGGAAGTGTAAAG+TGG + chr3_4:65071271-65071290 Msa0514380:CDS 35.0%
AAGGAACTTATGATATCAGC+GGG + chr3_4:65071823-65071842 Msa0514380:CDS 35.0%
! CTTATTGTTGTTGGAGGAAA+TGG + chr3_4:65071849-65071868 Msa0514380:CDS 35.0%
AGAAAGATTAAGATACAGGG+CGG - chr3_4:65071905-65071924 None:intergenic 35.0%
GGCAAGAAAGATTAAGATAC+AGG - chr3_4:65071909-65071928 None:intergenic 35.0%
!! TAGTTCTAAGCATCTGGATT+AGG - chr3_4:65071978-65071997 None:intergenic 35.0%
!! CTATCTTAGTTCTAAGCATC+TGG - chr3_4:65071984-65072003 None:intergenic 35.0%
GTTCGAAATATTTGAGGGTA+CGG - chr3_4:65072055-65072074 None:intergenic 35.0%
AGGAGGTTCGAAATATTTGA+GGG - chr3_4:65072060-65072079 None:intergenic 35.0%
AAGGAGGTTCGAAATATTTG+AGG - chr3_4:65072061-65072080 None:intergenic 35.0%
!!! CATAGCTGTTTTGGTCAATT+TGG + chr3_4:65072152-65072171 Msa0514380:CDS 35.0%
AAGTGAGAAATGTTGTGAGA+TGG + chr3_4:65072308-65072327 Msa0514380:CDS 35.0%
!! GGAAAGCTCTTAGTTTTCTA+TGG + chr3_4:65072553-65072572 Msa0514380:CDS 35.0%
CACTCATGTTCTCATGTAAA+TGG + chr3_4:65072656-65072675 Msa0514380:three_prime_UTR 35.0%
AAATCGATGAAGAGTTGTAC+AGG + chr3_4:65072699-65072718 Msa0514380:three_prime_UTR 35.0%
GAATTGTTGAGAAGACAGAG+AGG - chr3_4:65068085-65068104 None:intergenic 40.0%
GTTTGTGACATTGTCTTAGC+TGG + chr3_4:65068364-65068383 Msa0514380:intron 40.0%
ATAGACGACCGTTTAAACCA+AGG - chr3_4:65068527-65068546 None:intergenic 40.0%
CATTTCCGTGGTCTACTATT+TGG + chr3_4:65068625-65068644 Msa0514380:intron 40.0%
TCCAACCAAATAGTAGACCA+CGG - chr3_4:65068633-65068652 None:intergenic 40.0%
CACATCCACTGTGTAAACTT+GGG - chr3_4:65069011-65069030 None:intergenic 40.0%
TCACATCCACTGTGTAAACT+TGG - chr3_4:65069012-65069031 None:intergenic 40.0%
TACACAGTGGATGTGAATGA+TGG + chr3_4:65069016-65069035 Msa0514380:exon 40.0%
!! GTGAATGATGGATGTTTCTG+AGG + chr3_4:65069028-65069047 Msa0514380:exon 40.0%
GTGAACAAGTCCTTATGCAA+TGG + chr3_4:65069163-65069182 Msa0514380:intron 40.0%
AACAATGGTCAGAAAAGGCA+TGG - chr3_4:65069351-65069370 None:intergenic 40.0%
! TTCCTTCTTTAGAAGCTGCT+AGG + chr3_4:65069539-65069558 Msa0514380:CDS 40.0%
! TGAATTCCAGATTTGCTCCT+AGG - chr3_4:65069565-65069584 None:intergenic 40.0%
! TAGGAGCAAATCTGGAATTC+AGG + chr3_4:65069564-65069583 Msa0514380:CDS 40.0%
ACTCCATGTAGCATTAGAGA+AGG + chr3_4:65069597-65069616 Msa0514380:CDS 40.0%
TTGCCTTCTCTAATGCTACA+TGG - chr3_4:65069603-65069622 None:intergenic 40.0%
!! TTTTCTTATGTTGGTTGGCG+AGG + chr3_4:65069760-65069779 Msa0514380:intron 40.0%
CTTATGATGCAGGCTATAAC+AGG + chr3_4:65069834-65069853 Msa0514380:intron 40.0%
TATGATGCAGGCTATAACAG+GGG + chr3_4:65069836-65069855 Msa0514380:intron 40.0%
! ACTATCTACAAGAGCACACT+TGG - chr3_4:65069889-65069908 None:intergenic 40.0%
! TGTAGATAGTCTTAAGCTGG+TGG + chr3_4:65069899-65069918 Msa0514380:CDS 40.0%
GATATCGTTTCCCAATCCAT+TGG + chr3_4:65069924-65069943 Msa0514380:CDS 40.0%
AGTTATCACCTGATACCCAA+TGG - chr3_4:65069943-65069962 None:intergenic 40.0%
GTGTTTGATGTATGAGCAAG+TGG + chr3_4:65070079-65070098 Msa0514380:intron 40.0%
! GAGGTGGCATTCGATTATTT+TGG - chr3_4:65070134-65070153 None:intergenic 40.0%
TGTGAATGGACATGCACATA+TGG + chr3_4:65070199-65070218 Msa0514380:intron 40.0%
TGTGAACGAAATTGCTGGTA+TGG + chr3_4:65070317-65070336 Msa0514380:CDS 40.0%
AAAAGCTCATTGAAAGGGCT+CGG + chr3_4:65070517-65070536 Msa0514380:CDS 40.0%
CTCTGACGATAATGATTCTC+AGG + chr3_4:65070626-65070645 Msa0514380:CDS 40.0%
ATTGGACACCTTAACTCTTC+TGG - chr3_4:65070801-65070820 None:intergenic 40.0%
CTCATAAGTTGCAGTGAGAT+TGG - chr3_4:65070819-65070838 None:intergenic 40.0%
TGCCCAGAAGCAATTATAAC+AGG - chr3_4:65070846-65070865 None:intergenic 40.0%
!! TTTCTGTTGAGTTTTTGGGC+AGG - chr3_4:65070919-65070938 None:intergenic 40.0%
GACTCCTAATTACTGTGTCA+AGG + chr3_4:65070956-65070975 Msa0514380:CDS 40.0%
AGACCCTTGACACAGTAATT+AGG - chr3_4:65070963-65070982 None:intergenic 40.0%
AATGGAATCCCTATTCCTGA+AGG + chr3_4:65071005-65071024 Msa0514380:CDS 40.0%
AACTGAAAGTTTCTCTGCAC+AGG + chr3_4:65071190-65071209 Msa0514380:CDS 40.0%
CTGAAGGGAACAATTGGAAA+AGG + chr3_4:65071258-65071277 Msa0514380:CDS 40.0%
! TGAGGAAGCCAGGATTTTTA+TGG + chr3_4:65071325-65071344 Msa0514380:CDS 40.0%
! GAGGAAGCCAGGATTTTTAT+GGG + chr3_4:65071326-65071345 Msa0514380:CDS 40.0%
! AGGAAGCCAGGATTTTTATG+GGG + chr3_4:65071327-65071346 Msa0514380:CDS 40.0%
ATTAGCCCCCATAAAAATCC+TGG - chr3_4:65071336-65071355 None:intergenic 40.0%
! AGGATTTTTATGGGGGCTAA+TGG + chr3_4:65071335-65071354 Msa0514380:CDS 40.0%
TTCAATCAGCTGTGCATGAA+GGG + chr3_4:65071384-65071403 Msa0514380:CDS 40.0%
ATTATTGCTCCTAGTGCTCA+AGG + chr3_4:65071546-65071565 Msa0514380:intron 40.0%
AGGACGTTCCAATGTTAAAC+TGG + chr3_4:65071652-65071671 Msa0514380:intron 40.0%
AGCGGGAATCTTATTGTTGT+TGG + chr3_4:65071840-65071859 Msa0514380:CDS 40.0%
! GGGAATCTTATTGTTGTTGG+AGG + chr3_4:65071843-65071862 Msa0514380:CDS 40.0%
TCATATGCTTGGCTTCTTCA+AGG - chr3_4:65071930-65071949 None:intergenic 40.0%
GAAGAAGCCAAGCATATGAT+TGG + chr3_4:65071931-65071950 Msa0514380:CDS 40.0%
ATTTCGAACCTCCTTTCATC+TGG + chr3_4:65072066-65072085 Msa0514380:CDS 40.0%
!! CATTGATGATGCCAGATGAA+AGG - chr3_4:65072080-65072099 None:intergenic 40.0%
CTTTCATCTGGCATCATCAA+TGG + chr3_4:65072078-65072097 Msa0514380:CDS 40.0%
!! TTTTTCAGTCCATGTGCACT+CGG - chr3_4:65072130-65072149 None:intergenic 40.0%
AATTTGGCAGTTTCTCACGA+AGG + chr3_4:65072168-65072187 Msa0514380:CDS 40.0%
TCCTGAACTGATAAGCACAT+TGG + chr3_4:65072212-65072231 Msa0514380:CDS 40.0%
TTGGCTTCTATACTCGATAC+TGG + chr3_4:65072231-65072250 Msa0514380:CDS 40.0%
CTTGAGTATTAGCAGGTGAA+TGG - chr3_4:65072449-65072468 None:intergenic 40.0%
GAACAGTCTTGAGTATTAGC+AGG - chr3_4:65072456-65072475 None:intergenic 40.0%
!!! CTTAGAGGTTTTGTTTCTCG+AGG - chr3_4:65072507-65072526 None:intergenic 40.0%
ACATGAGAACATGAGTGAGA+GGG - chr3_4:65072653-65072672 None:intergenic 40.0%
TACATGAGAACATGAGTGAG+AGG - chr3_4:65072654-65072673 None:intergenic 40.0%
TACCACTCCCTTCTTCGTTA+TGG - chr3_4:65068004-65068023 None:intergenic 45.0%
AGAAGAAGGAAGGGAGAGAT+AGG - chr3_4:65068049-65068068 None:intergenic 45.0%
TTTGTGTTTCAGAGACAGGG+AGG - chr3_4:65068131-65068150 None:intergenic 45.0%
TCCGTGGTCTACTATTTGGT+TGG + chr3_4:65068629-65068648 Msa0514380:intron 45.0%
GGTCTACTATTTGGTTGGAG+AGG + chr3_4:65068634-65068653 Msa0514380:intron 45.0%
TAGGACCCAAGTTTACACAG+TGG + chr3_4:65069003-65069022 Msa0514380:five_prime_UTR 45.0%
TTCCCAATCCATTGGGTATC+AGG + chr3_4:65069932-65069951 Msa0514380:CDS 45.0%
! CACCTGATACCCAATGGATT+GGG - chr3_4:65069937-65069956 None:intergenic 45.0%
TCACCTGATACCCAATGGAT+TGG - chr3_4:65069938-65069957 None:intergenic 45.0%
CCAGAATATAGCAAACGAGG+TGG - chr3_4:65070150-65070169 None:intergenic 45.0%
!! CCACCTCGTTTGCTATATTC+TGG + chr3_4:65070147-65070166 Msa0514380:intron 45.0%
ATCCATCGGAGAAGCAAGTT+GGG + chr3_4:65070352-65070371 Msa0514380:CDS 45.0%
CATATGGCTGCTACTAGACT+TGG + chr3_4:65070450-65070469 Msa0514380:CDS 45.0%
AAAGCTCATTGAAAGGGCTC+GGG + chr3_4:65070518-65070537 Msa0514380:CDS 45.0%
TTCCTTCCTCTTGTCTTCCT+CGG - chr3_4:65070544-65070563 None:intergenic 45.0%
GTTAGGAGAACAGGGTTGAA+CGG - chr3_4:65070673-65070692 None:intergenic 45.0%
GTTCAACCCTGTTCTCCTAA+CGG + chr3_4:65070672-65070691 Msa0514380:CDS 45.0%
CTTAACTCTTCTGGTGGAAG+GGG - chr3_4:65070792-65070811 None:intergenic 45.0%
CCTTAACTCTTCTGGTGGAA+GGG - chr3_4:65070793-65070812 None:intergenic 45.0%
ACCTTAACTCTTCTGGTGGA+AGG - chr3_4:65070794-65070813 None:intergenic 45.0%
TTACTGTGTCAAGGGTCTTG+TGG + chr3_4:65070965-65070984 Msa0514380:CDS 45.0%
! GCTAGTTGGTGTGAACAGAA+TGG + chr3_4:65070987-65071006 Msa0514380:CDS 45.0%
AAGTTTCTCTGCACAGGAAG+AGG + chr3_4:65071196-65071215 Msa0514380:CDS 45.0%
! GGAAGTGTAAAGTGGTAGAG+CGG + chr3_4:65071279-65071298 Msa0514380:CDS 45.0%
! GGAAGCCAGGATTTTTATGG+GGG + chr3_4:65071328-65071347 Msa0514380:CDS 45.0%
CTTCAATCAGCTGTGCATGA+AGG + chr3_4:65071383-65071402 Msa0514380:CDS 45.0%
!! AATGCGATGGCTCTGGAAAA+TGG + chr3_4:65071407-65071426 Msa0514380:CDS 45.0%
!! AGCTATGGCTTTGTTCAACC+TGG + chr3_4:65071430-65071449 Msa0514380:CDS 45.0%
ACCTGGCTGTGAATAACAAC+AGG + chr3_4:65071447-65071466 Msa0514380:CDS 45.0%
! ACCTGTTGTTATTCACAGCC+AGG - chr3_4:65071451-65071470 None:intergenic 45.0%
GGCTGTGAATAACAACAGGT+AGG + chr3_4:65071451-65071470 Msa0514380:intron 45.0%
! CATTTTCGACCTTGAGCACT+AGG - chr3_4:65071558-65071577 None:intergenic 45.0%
! CATCTGGATTAGGAACTGCA+CGG - chr3_4:65071968-65071987 None:intergenic 45.0%
! TGATGATGCCAGATGAAAGG+AGG - chr3_4:65072077-65072096 None:intergenic 45.0%
AGTTTCTCACGAAGGAAGAG+AGG + chr3_4:65072176-65072195 Msa0514380:CDS 45.0%
GCCAATGTGCTTATCAGTTC+AGG - chr3_4:65072216-65072235 None:intergenic 45.0%
TACTGGTGAATCCATAGAGC+AGG + chr3_4:65072248-65072267 Msa0514380:CDS 45.0%
TGAATCCATAGAGCAGGAAC+AGG + chr3_4:65072254-65072273 Msa0514380:CDS 45.0%
ACGGTAAATGGTACCTCAAG+AGG + chr3_4:65072369-65072388 Msa0514380:CDS 45.0%
AGCTTTCTCTCTTCCTCTTG+AGG - chr3_4:65072385-65072404 None:intergenic 45.0%
ATGGACAAATCACCAGCTTC+AGG - chr3_4:65072480-65072499 None:intergenic 45.0%
!! TTTTGTTTCTCGAGGAGGCA+TGG - chr3_4:65072499-65072518 None:intergenic 45.0%
!!! AGAGGTTTTGTTTCTCGAGG+AGG - chr3_4:65072504-65072523 None:intergenic 45.0%
!!! AGTTTAATTTTTTTTTTTTA+AGG - chr3_4:65067889-65067908 None:intergenic 5.0%
!! TAAATAAACTATATATTATA+TGG - chr3_4:65067972-65067991 None:intergenic 5.0%
!!! TAATTTATTGAATTTATTTT+GGG + chr3_4:65072728-65072747 Msa0514380:three_prime_UTR 5.0%
!!! ATTTTGTCGGTGACGGGAGT+TGG + chr3_4:65069131-65069150 Msa0514380:intron 50.0%
! GGCCTAGCAGCTTCTAAAGA+AGG - chr3_4:65069544-65069563 None:intergenic 50.0%
! CTTTAGAAGCTGCTAGGCCT+AGG + chr3_4:65069545-65069564 Msa0514380:CDS 50.0%
GATCCATCGGAGAAGCAAGT+TGG + chr3_4:65070351-65070370 Msa0514380:CDS 50.0%
TCCATCGGAGAAGCAAGTTG+GGG + chr3_4:65070353-65070372 Msa0514380:CDS 50.0%
GGAACACCGTTAGGAGAACA+GGG - chr3_4:65070681-65070700 None:intergenic 50.0%
AGGAACACCGTTAGGAGAAC+AGG - chr3_4:65070682-65070701 None:intergenic 50.0%
TGTTCTCCTAACGGTGTTCC+TGG + chr3_4:65070681-65070700 Msa0514380:CDS 50.0%
AAGGCTTGACAATGACCACC+AGG - chr3_4:65070702-65070721 None:intergenic 50.0%
CCCTTCCACCAGAAGAGTTA+AGG + chr3_4:65070790-65070809 Msa0514380:CDS 50.0%
GGACACCTTAACTCTTCTGG+TGG - chr3_4:65070798-65070817 None:intergenic 50.0%
!! GAGTTTTTGGGCAGGTGTTG+TGG - chr3_4:65070911-65070930 None:intergenic 50.0%
! TCAAGGGTCTTGTGGCTAGT+TGG + chr3_4:65070973-65070992 Msa0514380:CDS 50.0%
AGCGGTTAAGACTCTTGCTG+CGG + chr3_4:65071297-65071316 Msa0514380:CDS 50.0%
TGTGCATGAAGGGAATGCGA+TGG + chr3_4:65071394-65071413 Msa0514380:CDS 50.0%
!! GGCTCTGGAAAATGGAGCTA+TGG + chr3_4:65071415-65071434 Msa0514380:CDS 50.0%
GGTTGCACAACTGTACGAAC+TGG - chr3_4:65071884-65071903 None:intergenic 50.0%
ACTCGCGCCAATCATATGCT+TGG - chr3_4:65071941-65071960 None:intergenic 50.0%
GGCCTACAATCCCTTCTTGT+AGG + chr3_4:65072099-65072118 Msa0514380:CDS 50.0%
GGCCTACAAGAAGGGATTGT+AGG - chr3_4:65072104-65072123 None:intergenic 50.0%
ACAATCCCTTCTTGTAGGCC+AGG + chr3_4:65072104-65072123 Msa0514380:CDS 50.0%
TGTGAGATGGTCCTGCAAGA+AGG + chr3_4:65072321-65072340 Msa0514380:CDS 50.0%
CAAGACTGTTCACCTGAAGC+TGG + chr3_4:65072465-65072484 Msa0514380:CDS 50.0%
CGCCATAACGAAGAAGGGAG+TGG + chr3_4:65067999-65068018 Msa0514380:five_prime_UTR 55.0%
!! TCAGAGACAGGGAGGCATTG+AGG - chr3_4:65068123-65068142 None:intergenic 55.0%
GCTAGGCCTAGGAGCAAATC+TGG + chr3_4:65069556-65069575 Msa0514380:CDS 55.0%
GGTGTTCGCGCTTGATCCAT+CGG + chr3_4:65070338-65070357 Msa0514380:CDS 55.0%
! TCCCCAACTTGCTTCTCCGA+TGG - chr3_4:65070357-65070376 None:intergenic 55.0%
TCTTTCGGTGAGAGCTGCTC+TGG - chr3_4:65070487-65070506 None:intergenic 55.0%
GGTTGAACGGTCGGAGAACA+CGG - chr3_4:65070660-65070679 None:intergenic 55.0%
GGAGAACAGGGTTGAACGGT+CGG - chr3_4:65070669-65070688 None:intergenic 55.0%
TCTCCTAACGGTGTTCCTGG+TGG + chr3_4:65070684-65070703 Msa0514380:CDS 55.0%
TGACCACCAGGAACACCGTT+AGG - chr3_4:65070690-65070709 None:intergenic 55.0%
GCGGTTAAGACTCTTGCTGC+GGG + chr3_4:65071298-65071317 Msa0514380:CDS 55.0%
ACTCTTGCTGCGGGATGATG+AGG + chr3_4:65071307-65071326 Msa0514380:CDS 55.0%
TGAAGGGAATGCGATGGCTC+TGG + chr3_4:65071400-65071419 Msa0514380:CDS 55.0%
GCATATGATTGGCGCGAGTC+AGG + chr3_4:65071942-65071961 Msa0514380:CDS 55.0%
CACAGCCTGTTCCTGCTCTA+TGG - chr3_4:65072262-65072281 None:intergenic 55.0%
CAGGTATAGCGCCTTCTTGC+AGG - chr3_4:65072335-65072354 None:intergenic 55.0%
CTTTGCTGCAAGCGACGCCA+AGG + chr3_4:65069064-65069083 Msa0514380:CDS 60.0%
GGCCGAGGAAGACAAGAGGA+AGG + chr3_4:65070539-65070558 Msa0514380:CDS 60.0%
CGGGAGGGCCTTCAGGAATA+GGG - chr3_4:65071016-65071035 None:intergenic 60.0%
TCGGGAGGGCCTTCAGGAAT+AGG - chr3_4:65071017-65071036 None:intergenic 60.0%
AGAGATTCGGGAGGGCCTTC+AGG - chr3_4:65071023-65071042 None:intergenic 60.0%
TGCGGGATGATGAGGAAGCC+AGG + chr3_4:65071315-65071334 Msa0514380:CDS 60.0%
!! GGAGGGCATCTAGCTTGCAC+TGG - chr3_4:65072011-65072030 None:intergenic 60.0%
CTCGGCCTGGCCTACAAGAA+GGG - chr3_4:65072112-65072131 None:intergenic 60.0%
ACTCGGCCTGGCCTACAAGA+AGG - chr3_4:65072113-65072132 None:intergenic 60.0%
CATTGAAAGGGCTCGGGCCG+AGG + chr3_4:65070524-65070543 Msa0514380:CDS 65.0%
CTCGGGCCGAGGAAGACAAG+AGG + chr3_4:65070535-65070554 Msa0514380:CDS 65.0%
TAGGCCAGGCCGAGTGCACA+TGG + chr3_4:65072118-65072137 Msa0514380:CDS 65.0%
CAGTCCATGTGCACTCGGCC+TGG - chr3_4:65072125-65072144 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 65067861 65072905 65067861 ID=Msa0514380;Name=Msa0514380
chr3_4 mRNA 65067861 65072905 65067861 ID=Msa0514380-mRNA-1;Parent=Msa0514380;Name=Msa0514380-mRNA-1;_AED=0.05;_eAED=0.05;_QI=520|1|1|1|0.8|0.66|6|297|766
chr3_4 exon 65067861 65068264 65067861 ID=Msa0514380-mRNA-1:exon:16452;Parent=Msa0514380-mRNA-1
chr3_4 exon 65068916 65069085 65068916 ID=Msa0514380-mRNA-1:exon:16453;Parent=Msa0514380-mRNA-1
chr3_4 exon 65069481 65069666 65069481 ID=Msa0514380-mRNA-1:exon:16454;Parent=Msa0514380-mRNA-1
chr3_4 exon 65069846 65069953 65069846 ID=Msa0514380-mRNA-1:exon:16455;Parent=Msa0514380-mRNA-1
chr3_4 exon 65070306 65071468 65070306 ID=Msa0514380-mRNA-1:exon:16456;Parent=Msa0514380-mRNA-1
chr3_4 exon 65071819 65072905 65071819 ID=Msa0514380-mRNA-1:exon:16457;Parent=Msa0514380-mRNA-1
chr3_4 five_prime_UTR 65067861 65068264 65067861 ID=Msa0514380-mRNA-1:five_prime_utr;Parent=Msa0514380-mRNA-1
chr3_4 five_prime_UTR 65068916 65069031 65068916 ID=Msa0514380-mRNA-1:five_prime_utr;Parent=Msa0514380-mRNA-1
chr3_4 CDS 65069032 65069085 65069032 ID=Msa0514380-mRNA-1:cds;Parent=Msa0514380-mRNA-1
chr3_4 CDS 65069481 65069666 65069481 ID=Msa0514380-mRNA-1:cds;Parent=Msa0514380-mRNA-1
chr3_4 CDS 65069846 65069953 65069846 ID=Msa0514380-mRNA-1:cds;Parent=Msa0514380-mRNA-1
chr3_4 CDS 65070306 65071468 65070306 ID=Msa0514380-mRNA-1:cds;Parent=Msa0514380-mRNA-1
chr3_4 CDS 65071819 65072608 65071819 ID=Msa0514380-mRNA-1:cds;Parent=Msa0514380-mRNA-1
chr3_4 three_prime_UTR 65072609 65072905 65072609 ID=Msa0514380-mRNA-1:three_prime_utr;Parent=Msa0514380-mRNA-1
Gene Sequence

>Msa0514380

ATGATGGATGTTTCTGAGGTTGAAGAAAATTTCTTTGCTGCAAGCGACGCCAAGTTACATGCAGAAATGTGCAGAAGTCTTTCTGCAATATATTGTAAAGTATTGTCATTATTTCCTTCTTTAGAAGCTGCTAGGCCTAGGAGCAAATCTGGAATTCAGGCATTATGTTCACTCCATGTAGCATTAGAGAAGGCAAAGAATGTACTTAAGCATTGTTCAGAGTGTAGTAAACTTTACTTGGCTATAACAGGGGACTCTGTTCTTCTCAAATTTGAGAAGGCCAAGTGTGCTCTTGTAGATAGTCTTAAGCTGGTGGAAGATATCGTTTCCCAATCCATTGGGTATCAGATTGATGAAATTGTGAACGAAATTGCTGGTATGGTGTTCGCGCTTGATCCATCGGAGAAGCAAGTTGGGGATGATTTAATTGCATTGCTTCAGCAGGATAGAAAGTTTAACAACTCTAATGATAGTAGTGAACTTGAGTGTTTTCATATGGCTGCTACTAGACTTGGAATCACATCTTCCAGAGCAGCTCTCACCGAAAGAAGAGCTTTAAAAAAGCTCATTGAAAGGGCTCGGGCCGAGGAAGACAAGAGGAAGGAATCAATTATTGCATATCTATTACACCTTATGAGGAAATACTCCAAGTTATTTAGAAGTGAGTTCTCTGACGATAATGATTCTCAGGGTTCTCAACCGTGTTCTCCGACCGTTCAACCCTGTTCTCCTAACGGTGTTCCTGGTGGTCATTGTCAAGCCTTTGACAGACAGATATCAAAACTTGGTTCCTTTAATTTTAAACCTAACAAAAAGAAATCAGGTCAAATGCCCCTTCCACCAGAAGAGTTAAGGTGTCCAATCTCACTGCAACTTATGAGCGATCCTGTTATAATTGCTTCTGGGCAGACATATGAAAGAGCTTGTATAGAAAAATGGTTCAATGATGGCCACAACACCTGCCCAAAAACTCAACAGAAACTTGCACATCTTTCTTTGACTCCTAATTACTGTGTCAAGGGTCTTGTGGCTAGTTGGTGTGAACAGAATGGAATCCCTATTCCTGAAGGCCCTCCCGAATCTCTTGATTTTAACTACTGGAGATTGGCATTATCAGATTCCGAATCCATTAATTCAAGATCTGTAAACAGTGTCAACTCTTGCAAATTGAAGGGTGTCAAAGTTGTTCCACTTGAAGAGAATAGTATCTTAGAGCAAACTGAGGGAAATGTAACTGAAAGTTTCTCTGCACAGGAAGAGGAAGACAGTGATAAGTATCTTAGTTTACTGAAAGTATTGACTGAAGGGAACAATTGGAAAAGGAAGTGTAAAGTGGTAGAGCGGTTAAGACTCTTGCTGCGGGATGATGAGGAAGCCAGGATTTTTATGGGGGCTAATGGATTTGTTGAAGTACTTTTTCAGTTTCTTCAATCAGCTGTGCATGAAGGGAATGCGATGGCTCTGGAAAATGGAGCTATGGCTTTGTTCAACCTGGCTGTGAATAACAACAGAAATAAGGAACTTATGATATCAGCGGGAATCTTATTGTTGTTGGAGGAAATGGTTTCAAGCACCAGTTCGTACAGTTGTGCAACCGCCCTGTATCTTAATCTTTCTTGCCTTGAAGAAGCCAAGCATATGATTGGCGCGAGTCAGGCCGTGCAGTTCCTAATCCAGATGCTTAGAACTAAGATAGAAGTCCAGTGCAAGCTAGATGCCCTCCATGCACTCTATAATATTTCTACCGTACCCTCAAATATTTCGAACCTCCTTTCATCTGGCATCATCAATGGCCTACAATCCCTTCTTGTAGGCCAGGCCGAGTGCACATGGACTGAAAAATGCATAGCTGTTTTGGTCAATTTGGCAGTTTCTCACGAAGGAAGAGAGGAAATGATGTTGAATCCTGAACTGATAAGCACATTGGCTTCTATACTCGATACTGGTGAATCCATAGAGCAGGAACAGGCTGTGTCTTGCCTCCTAATATTATGCAACAGAAGTGAGAAATGTTGTGAGATGGTCCTGCAAGAAGGCGCTATACCTGCATTGGTGTCGATAACGGTAAATGGTACCTCAAGAGGAAGAGAGAAAGCTCAGAAACTCTTGATGCTCTTTCGAGAGCAGCGACAACGAGACCATTCACCTGCTAATACTCAAGACTGTTCACCTGAAGCTGGTGATTTGTCCATGCCTCCTCGAGAAACAAAACCTCTAAGTAAATCAATATCTAGAAGAAAAGTGGGGAAAGCTCTTAGTTTTCTATGGAAAAGCAAAAGCTATTCTGTTTACCAGTGTTAG
Protein sequence

>Msa0514380

MMDVSEVEENFFAASDAKLHAEMCRSLSAIYCKVLSLFPSLEAARPRSKSGIQALCSLHVALEKAKNVLKHCSECSKLYLAITGDSVLLKFEKAKCALVDSLKLVEDIVSQSIGYQIDEIVNEIAGMVFALDPSEKQVGDDLIALLQQDRKFNNSNDSSELECFHMAATRLGITSSRAALTERRALKKLIERARAEEDKRKESIIAYLLHLMRKYSKLFRSEFSDDNDSQGSQPCSPTVQPCSPNGVPGGHCQAFDRQISKLGSFNFKPNKKKSGQMPLPPEELRCPISLQLMSDPVIIASGQTYERACIEKWFNDGHNTCPKTQQKLAHLSLTPNYCVKGLVASWCEQNGIPIPEGPPESLDFNYWRLALSDSESINSRSVNSVNSCKLKGVKVVPLEENSILEQTEGNVTESFSAQEEEDSDKYLSLLKVLTEGNNWKRKCKVVERLRLLLRDDEEARIFMGANGFVEVLFQFLQSAVHEGNAMALENGAMALFNLAVNNNRNKELMISAGILLLLEEMVSSTSSYSCATALYLNLSCLEEAKHMIGASQAVQFLIQMLRTKIEVQCKLDALHALYNISTVPSNISNLLSSGIINGLQSLLVGQAECTWTEKCIAVLVNLAVSHEGREEMMLNPELISTLASILDTGESIEQEQAVSCLLILCNRSEKCCEMVLQEGAIPALVSITVNGTSRGREKAQKLLMLFREQRQRDHSPANTQDCSPEAGDLSMPPRETKPLSKSISRRKVGKALSFLWKSKSYSVYQC*