AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0519530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0519530 MtrunA17_Chr3g0135001 91.943 422 19 6 1 411 1 418 0.0 701
Msa0519530 MtrunA17_Chr5g0400951 36.085 424 248 9 3 408 2 420 1.29e-56 193
Msa0519530 MtrunA17_Chr4g0064381 39.200 125 72 3 131 255 115 235 1.68e-22 98.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0519530 AT1G10720.1 43.915 378 161 10 50 396 51 408 1.72e-67 221
Msa0519530 AT3G49800.1 36.085 424 235 8 3 396 2 419 1.21e-61 205
Msa0519530 AT5G65910.1 35.252 417 212 11 3 396 2 383 1.08e-51 179
Msa0519530 AT2G10950.1 35.238 210 106 8 57 255 25 215 1.03e-26 109
Msa0519530 AT2G10950.2 35.238 210 106 8 57 255 25 215 1.03e-26 109
Msa0519530 AT2G10950.3 35.238 210 106 8 57 255 25 215 1.03e-26 109

Find 122 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGACGATGATTCTGATTT+AGG 0.116038 3_4:-71732739 Msa0519530:CDS
AAACCCTAACTCGTCAATTT+TGG 0.118472 3_4:-71736148 Msa0519530:CDS
GATCCGAATGTATTCGAATT+TGG 0.171343 3_4:+71735984 None:intergenic
CTTCCGAAAATTTCAAATTC+AGG 0.205294 3_4:+71733060 None:intergenic
TTATTTATGGTGGATGTAAT+AGG 0.210532 3_4:-71732112 Msa0519530:three_prime_UTR
GGAAAATCCAACCATGTTTC+AGG 0.237635 3_4:+71735864 None:intergenic
AATTCTTAGCGCAGCTAATC+TGG 0.242948 3_4:+71735614 None:intergenic
CATGGTTGTGGGTTGAAATA+TGG 0.250336 3_4:-71732246 Msa0519530:three_prime_UTR
TCAATTGCATTATTATTTCT+AGG 0.261820 3_4:+71736236 None:intergenic
TTGATTGATGTTGAGGTTAA+AGG 0.268210 3_4:+71736417 None:intergenic
TTACGGTGGTCGTCTACTTT+TGG 0.276815 3_4:+71736468 None:intergenic
AGCTTCTCAAATTATGATTC+AGG 0.278846 3_4:-71732791 Msa0519530:CDS
CAGACGATGATTCTGATTTA+GGG 0.320175 3_4:-71732738 Msa0519530:CDS
GTTGACACACCAAGGCAATT+AGG 0.324414 3_4:+71732054 None:intergenic
ATATGAGTGAAAGTTACTTT+TGG 0.337115 3_4:-71735575 Msa0519530:CDS
ATATCTTCTTCATTCACAAT+AGG 0.340594 3_4:+71732694 None:intergenic
AATTATTGAAATAATCACTA+TGG 0.344835 3_4:+71732019 None:intergenic
AATGTATTCGAATTTGGTTC+AGG 0.348193 3_4:+71735990 None:intergenic
TATTTATGGTGGATGTAATA+GGG 0.355629 3_4:-71732111 Msa0519530:three_prime_UTR
TGGTGGATGTAATAGGGTTC+GGG 0.359587 3_4:-71732105 Msa0519530:three_prime_UTR
GTTATCATCTTCTTCATCAA+TGG 0.366231 3_4:+71735842 None:intergenic
TACCCCAAAATTGACGAGTT+AGG 0.366692 3_4:+71736144 None:intergenic
CACCAAGGCAATTAGGATTC+AGG 0.370842 3_4:+71732061 None:intergenic
AAGTTCTGGATCACATTTAT+CGG 0.371113 3_4:-71732878 Msa0519530:CDS
GATCTCGAGGATGATGATTA+TGG 0.375938 3_4:-71732661 Msa0519530:CDS
AAGTACACAATTGAAAGTTC+TGG 0.380859 3_4:-71732892 Msa0519530:CDS
AAAGAGAATTGCCAGATGTT+TGG 0.381680 3_4:-71732530 Msa0519530:three_prime_UTR
ACAATGTGCGGTTGGAATTA+CGG 0.383820 3_4:-71735925 Msa0519530:CDS
ATGGTGGATGTAATAGGGTT+CGG 0.385725 3_4:-71732106 Msa0519530:three_prime_UTR
AGGTGAGGTGGTTGGAGATT+CGG 0.393384 3_4:+71736256 None:intergenic
TTCATGTTCTCTTTCAGAAT+CGG 0.394328 3_4:+71735962 None:intergenic
ACCCCAAAATTGACGAGTTA+GGG 0.399070 3_4:+71736145 None:intergenic
ATAGTTGATGGAGGAGGAGG+AGG 0.401782 3_4:+71736104 None:intergenic
TATCTTCTTCATTCACAATA+GGG 0.403821 3_4:+71732695 None:intergenic
AAAACATCAAACATGGATAC+TGG 0.409853 3_4:-71732505 Msa0519530:three_prime_UTR
CTCGAATCAAAATTCTGAAA+TGG 0.421081 3_4:-71736039 Msa0519530:CDS
TTATCATCTTCTTCATCAAT+GGG 0.426324 3_4:+71735843 None:intergenic
CAACAACAACGGCAAGTTGA+TGG 0.428975 3_4:-71736071 Msa0519530:CDS
GACATGCCTCATCGGACATT+CGG 0.431916 3_4:-71732961 Msa0519530:CDS
ATCAGGTGGGTGCTGCGTTA+CGG 0.441257 3_4:+71736451 None:intergenic
TAAAGGTTGGGATCAGGATC+AGG 0.442900 3_4:+71736434 None:intergenic
GTATTTCAAAACAACTCAAA+TGG 0.451191 3_4:-71732334 Msa0519530:three_prime_UTR
AAATATGGGCATCTATTTCA+AGG 0.451863 3_4:-71732231 Msa0519530:three_prime_UTR
TGAGATGGAGAAATAGTTGA+TGG 0.453735 3_4:+71736092 None:intergenic
ATCGGATAAGTCGGTTATTG+AGG 0.460715 3_4:-71732860 Msa0519530:CDS
CTCCTGAATCCTAATTGCCT+TGG 0.461505 3_4:-71732063 Msa0519530:three_prime_UTR
TTCTGAAAGAGAACATGAAA+GGG 0.464632 3_4:-71735958 Msa0519530:CDS
GAAATAGTTGATGGAGGAGG+AGG 0.465113 3_4:+71736101 None:intergenic
ATAGGTGTCATCTGATAAGC+TGG 0.468819 3_4:+71732990 None:intergenic
GATATCGAAAACATGGTTGT+GGG 0.472505 3_4:-71732257 Msa0519530:three_prime_UTR
AGATATCGAAAACATGGTTG+TGG 0.473074 3_4:-71732258 Msa0519530:three_prime_UTR
GAACCAAATTCGAATACATT+CGG 0.473550 3_4:-71735987 Msa0519530:CDS
TGAGGTTAAAGGTTGGGATC+AGG 0.476856 3_4:+71736428 None:intergenic
TGATGTTGAGGTTAAAGGTT+GGG 0.479630 3_4:+71736422 None:intergenic
TTCCTGCATCCACATTGATC+TGG 0.490551 3_4:+71733101 None:intergenic
ATGAGGCATGTCATCAGAAT+AGG 0.499437 3_4:+71732972 None:intergenic
AGCCAGATCAATGTGGATGC+AGG 0.502125 3_4:-71733103 Msa0519530:CDS
ATGGTTGTGGGTTGAAATAT+GGG 0.504035 3_4:-71732245 Msa0519530:three_prime_UTR
TGCATTATTATTTCTAGGTG+AGG 0.508488 3_4:+71736241 None:intergenic
ATTCTTAGCGCAGCTAATCT+GGG 0.509581 3_4:+71735615 None:intergenic
TTGATTTCTTGTTCAGTGTG+AGG 0.519973 3_4:+71732553 None:intergenic
ATTATTATTTCTAGGTGAGG+TGG 0.523254 3_4:+71736244 None:intergenic
GGAGAAATAGTTGATGGAGG+AGG 0.524034 3_4:+71736098 None:intergenic
TAACTTCGCTCACCATTATG+TGG 0.525605 3_4:+71732459 None:intergenic
TGGTTTATTGATTGATGTTG+AGG 0.526585 3_4:+71736410 None:intergenic
ATTCTGAAAGAGAACATGAA+AGG 0.529381 3_4:-71735959 Msa0519530:CDS
CCTAAATCAGAATCATCGTC+TGG 0.535306 3_4:+71732739 None:intergenic
TGGAACAAGCTGTGTTCCGT+GGG 0.540715 3_4:-71736019 Msa0519530:CDS
TAGTAGCAATTCAGATTCAA+AGG 0.541777 3_4:-71732626 Msa0519530:CDS
AACAACCTCTTTGTCTGTGA+TGG 0.543867 3_4:-71732932 Msa0519530:CDS
CGATTCGGAGAGAGTTTGCA+AGG 0.544073 3_4:+71736324 None:intergenic
TTGACGACGGTGATGATGAT+TGG 0.544899 3_4:-71732762 Msa0519530:CDS
TAGGGTTCGGGTTTCTACCC+CGG 0.547800 3_4:-71732093 Msa0519530:three_prime_UTR
AGCATGATCTCGTTGGTCCT+CGG 0.550779 3_4:+71735659 None:intergenic
TTTGATATACAATGTGCGGT+TGG 0.553973 3_4:-71735933 Msa0519530:CDS
GCAAGGCTAGGTGGGTTTGA+AGG 0.553989 3_4:-71732365 Msa0519530:three_prime_UTR
ACTTGCCGTTGTTGTTGAGA+TGG 0.556511 3_4:+71736077 None:intergenic
GATGGAGAAATAGTTGATGG+AGG 0.562302 3_4:+71736095 None:intergenic
AAATGCTGTGATGATATTTG+AGG 0.563683 3_4:-71732433 Msa0519530:three_prime_UTR
TTATTTCTAGGTGAGGTGGT+TGG 0.564798 3_4:+71736248 None:intergenic
ATCACATTTATCGGATAAGT+CGG 0.568429 3_4:-71732869 Msa0519530:CDS
ATCTGCCATCACAGACAAAG+AGG 0.578070 3_4:+71732927 None:intergenic
ATTCTGATGACATGCCTCAT+CGG 0.584652 3_4:-71732969 Msa0519530:CDS
GGAATTTGATATACAATGTG+CGG 0.588890 3_4:-71735937 Msa0519530:CDS
GATGAAACGTTGCAAGGTCG+TGG 0.591256 3_4:-71736200 Msa0519530:CDS
CAAACACAGTTGACACACCA+AGG 0.593634 3_4:+71732046 None:intergenic
ATCATGCTATGGTCGTTGAA+AGG 0.598303 3_4:-71735644 Msa0519530:CDS
TGCGGTTGGAATTACGGAGG+AGG 0.600877 3_4:-71735919 Msa0519530:CDS
AGGATTCAGGAGAACAACAC+CGG 0.602635 3_4:+71732074 None:intergenic
GAAAATGATGAAACGTTGCA+AGG 0.602997 3_4:-71736206 Msa0519530:CDS
TCAATCAATAAACCATTCGA+AGG 0.603826 3_4:-71736402 Msa0519530:five_prime_UTR
TATATCTTTCAGCGATCTCG+AGG 0.605970 3_4:-71732674 Msa0519530:CDS
AGGTTGGGATCAGGATCAGG+TGG 0.609537 3_4:+71736437 None:intergenic
AGACGATGATTCTGATTTAG+GGG 0.611211 3_4:-71732737 Msa0519530:CDS
CGACCATAGCATGATCTCGT+TGG 0.611446 3_4:+71735652 None:intergenic
TTGATATTTGATGACAAACA+AGG 0.613012 3_4:+71732157 None:intergenic
TTGATGTTGAGGTTAAAGGT+TGG 0.620803 3_4:+71736421 None:intergenic
GGATTCAGGAGAACAACACC+GGG 0.625463 3_4:+71732075 None:intergenic
AGGTGGGTGCTGCGTTACGG+TGG 0.625573 3_4:+71736454 None:intergenic
GACGATGATTCTGATTTAGG+GGG 0.629733 3_4:-71732736 Msa0519530:CDS
TATGCATCCTGAAACATGGT+TGG 0.632829 3_4:-71735871 Msa0519530:CDS
ATGGAACAAGCTGTGTTCCG+TGG 0.634294 3_4:-71736020 Msa0519530:CDS
GGTTGGGATCAGGATCAGGT+GGG 0.650397 3_4:+71736438 None:intergenic
TAACTTTCACTCATATGACA+AGG 0.653724 3_4:+71735582 None:intergenic
GGACCAACGAGATCATGCTA+TGG 0.656196 3_4:-71735655 Msa0519530:CDS
TTGGTTCAGGATCATCCCCA+CGG 0.656808 3_4:+71736003 None:intergenic
GGGTTTGTTTGATTTCGTCG+AGG 0.657504 3_4:+71736165 None:intergenic
TAGGTGTCATCTGATAAGCT+GGG 0.666888 3_4:+71732991 None:intergenic
TTGCTATGCATCCTGAAACA+TGG 0.669635 3_4:-71735875 Msa0519530:CDS
AACTTTCACTCATATGACAA+GGG 0.678075 3_4:+71735583 None:intergenic
TAGCAATTCAGATTCAAAGG+TGG 0.680098 3_4:-71732623 Msa0519530:CDS
TTCAAACCCACCTAGCCTTG+CGG 0.682308 3_4:+71732367 None:intergenic
GATTCGGAGAGAGTTTGCAA+GGG 0.683544 3_4:+71736325 None:intergenic
TTTCTCCATCTCAACAACAA+CGG 0.693561 3_4:-71736082 Msa0519530:CDS
CTATATCCGAATGTCCGATG+AGG 0.695034 3_4:+71732955 None:intergenic
TCATGGTAGCCAGATCAATG+TGG 0.707205 3_4:-71733110 Msa0519530:CDS
GATGAAGAAGATGATAACGA+CGG 0.709312 3_4:-71735837 Msa0519530:intron
ATTCAGGACTATGTTGACGA+CGG 0.722797 3_4:-71732775 Msa0519530:CDS
ATGTGCGGTTGGAATTACGG+AGG 0.754385 3_4:-71735922 Msa0519530:CDS
AACTTCAGATGACACGACTG+AGG 0.758277 3_4:-71732596 Msa0519530:three_prime_UTR
GGAACAAGCTGTGTTCCGTG+GGG 0.773574 3_4:-71736018 Msa0519530:CDS
GATTCAGGAGAACAACACCG+GGG 0.849144 3_4:+71732076 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTTAATTTTACCATT+AGG - chr3_4:71734006-71734025 Msa0519530:intron 10.0%
!!! TATTTTTAATTTTACCATTA+GGG - chr3_4:71734007-71734026 Msa0519530:intron 10.0%
!!! TGATTTTTTTCATTTATTTA+TGG - chr3_4:71736368-71736387 Msa0519530:exon 10.0%
!! TTAGAAATAAAATATTGAGT+CGG + chr3_4:71733952-71733971 None:intergenic 15.0%
!!! ATTTTTAATTTTACCATTAG+GGG - chr3_4:71734008-71734027 Msa0519530:intron 15.0%
!!! TTAAAAACTTATAATTTGTG+AGG + chr3_4:71734940-71734959 None:intergenic 15.0%
!!! TTGTTTTCAGTTTTATTAAT+TGG + chr3_4:71735664-71735683 None:intergenic 15.0%
!!! TTTTTTTCATTTATTTATGG+TGG - chr3_4:71736371-71736390 Msa0519530:five_prime_UTR 15.0%
!! AATTATTGAAATAATCACTA+TGG + chr3_4:71736477-71736496 None:intergenic 15.0%
!! AAAACAAAAAAATGTCATCA+TGG - chr3_4:71732135-71732154 Msa0519530:three_prime_UTR 20.0%
!!! TCAATTGCATTATTATTTCT+AGG + chr3_4:71732260-71732279 None:intergenic 20.0%
!! AAAATTCATCATTACAGAAA+TGG + chr3_4:71732778-71732797 None:intergenic 20.0%
!! TTTCTATCTAATAGAAATAG+TGG + chr3_4:71733111-71733130 None:intergenic 20.0%
!!! AGTTTAAAACAACTAATTAC+TGG - chr3_4:71733680-71733699 Msa0519530:intron 20.0%
!! ATTTAAATTTCTACTTCAGT+TGG - chr3_4:71734279-71734298 Msa0519530:intron 20.0%
!! TTTAAATTTCTACTTCAGTT+GGG - chr3_4:71734280-71734299 Msa0519530:intron 20.0%
!! AAATGAGAAGAAATCTTAAA+AGG + chr3_4:71734441-71734460 None:intergenic 20.0%
!! TAATCGTGTGTATTATAATT+TGG + chr3_4:71734640-71734659 None:intergenic 20.0%
!!! TATTTTAAAGCTACGATAAT+GGG - chr3_4:71735319-71735338 Msa0519530:intron 20.0%
!! GATAAACTTCTTTAATATCT+TGG - chr3_4:71735344-71735363 Msa0519530:intron 20.0%
!!! TTTTTTAGATATCGAAAACA+TGG - chr3_4:71736229-71736248 Msa0519530:CDS 20.0%
! TTATCATCTTCTTCATCAAT+GGG + chr3_4:71732653-71732672 None:intergenic 25.0%
! TAGCACATTATTATCAGAAA+TGG + chr3_4:71732727-71732746 None:intergenic 25.0%
!!! ATATGAGTGAAAGTTACTTT+TGG - chr3_4:71732918-71732937 Msa0519530:CDS 25.0%
!! ATTTTGTACTTTTGCATTCA+AGG - chr3_4:71732948-71732967 Msa0519530:CDS 25.0%
! GCTTGTAAATTATAAGTGAT+AGG - chr3_4:71733217-71733236 Msa0519530:intron 25.0%
! ATAGGTGTAAATTATGAACT+AGG - chr3_4:71733235-71733254 Msa0519530:intron 25.0%
! TTAATGATCCGCTATTAATT+GGG + chr3_4:71733517-71733536 None:intergenic 25.0%
! TTTAATGATCCGCTATTAAT+TGG + chr3_4:71733518-71733537 None:intergenic 25.0%
! AAAAGGAAGAAACAAATTAC+TGG - chr3_4:71733656-71733675 Msa0519530:intron 25.0%
! TGAAGATAATGATTATGTTG+TGG + chr3_4:71733757-71733776 None:intergenic 25.0%
!!! ATCTTCATTTTTAGATAGTG+AGG - chr3_4:71733770-71733789 Msa0519530:intron 25.0%
! CTATACCACTATTACATATT+GGG + chr3_4:71734176-71734195 None:intergenic 25.0%
! AATATGTAATAGTGGTATAG+CGG - chr3_4:71734176-71734195 Msa0519530:intron 25.0%
! AATAACAGAAACATTTAGAG+AGG + chr3_4:71734223-71734242 None:intergenic 25.0%
! GGCAAAAGAAATTTAGAAAA+TGG + chr3_4:71734420-71734439 None:intergenic 25.0%
!!! TTCCAGATTTTGATTGTTAT+TGG - chr3_4:71734521-71734540 Msa0519530:intron 25.0%
! TTCCAATAACAATCAAAATC+TGG + chr3_4:71734526-71734545 None:intergenic 25.0%
! AATCCAAGAATAGAGATTAT+TGG - chr3_4:71734544-71734563 Msa0519530:intron 25.0%
! TTTCCAATAATCTCTATTCT+TGG + chr3_4:71734550-71734569 None:intergenic 25.0%
! ATTGTTATAATCTTTCTTCC+TGG - chr3_4:71734582-71734601 Msa0519530:intron 25.0%
! TCATATGTTAATGCCTAATA+CGG - chr3_4:71734680-71734699 Msa0519530:intron 25.0%
! ATATGTTTGGATTGATGAAA+AGG - chr3_4:71734703-71734722 Msa0519530:intron 25.0%
! TATGTTTGGATTGATGAAAA+GGG - chr3_4:71734704-71734723 Msa0519530:intron 25.0%
! TCGTTAAACATTCTATTGTT+TGG - chr3_4:71734741-71734760 Msa0519530:intron 25.0%
! AAGAATTCAACATGATTTCA+TGG - chr3_4:71734785-71734804 Msa0519530:intron 25.0%
! AAAGTGAAAGACTTGTAATT+AGG - chr3_4:71735092-71735111 Msa0519530:intron 25.0%
!!! AATGTTTGCTTTATTTGAAG+AGG - chr3_4:71735153-71735172 Msa0519530:intron 25.0%
!!! AAGTATTTCTCATTTTTCCT+CGG - chr3_4:71735188-71735207 Msa0519530:intron 25.0%
!!! GTATTTTAAAGCTACGATAA+TGG - chr3_4:71735318-71735337 Msa0519530:intron 25.0%
!!! AAGCCTGAATTTGAAATTTT+CGG - chr3_4:71735430-71735449 Msa0519530:intron 25.0%
! GAAAACAAAGATCTAAAAAG+TGG - chr3_4:71735676-71735695 Msa0519530:intron 25.0%
! TATCTTCTTCATTCACAATA+GGG + chr3_4:71735801-71735820 None:intergenic 25.0%
! ATATCTTCTTCATTCACAAT+AGG + chr3_4:71735802-71735821 None:intergenic 25.0%
! TTTGGTAAAAACATCAAACA+TGG - chr3_4:71735981-71736000 Msa0519530:CDS 25.0%
!!! TATCTTTTTTGTCCACATAA+TGG - chr3_4:71736022-71736041 Msa0519530:CDS 25.0%
! GTATTTCAAAACAACTCAAA+TGG - chr3_4:71736159-71736178 Msa0519530:CDS 25.0%
!! TTGATATTTGATGACAAACA+AGG + chr3_4:71736339-71736358 None:intergenic 25.0%
!!! TTATTTATGGTGGATGTAAT+AGG - chr3_4:71736381-71736400 Msa0519530:five_prime_UTR 25.0%
!!! TATTTATGGTGGATGTAATA+GGG - chr3_4:71736382-71736401 Msa0519530:five_prime_UTR 25.0%
TTGATTGATGTTGAGGTTAA+AGG + chr3_4:71732079-71732098 None:intergenic 30.0%
! TGGTTTATTGATTGATGTTG+AGG + chr3_4:71732086-71732105 None:intergenic 30.0%
TCAATCAATAAACCATTCGA+AGG - chr3_4:71732091-71732110 Msa0519530:three_prime_UTR 30.0%
! AATCATCATCATCATCGATT+CGG + chr3_4:71732187-71732206 None:intergenic 30.0%
!! ATTATTATTTCTAGGTGAGG+TGG + chr3_4:71732252-71732271 None:intergenic 30.0%
!! TGCATTATTATTTCTAGGTG+AGG + chr3_4:71732255-71732274 None:intergenic 30.0%
! CTCGAATCAAAATTCTGAAA+TGG - chr3_4:71732454-71732473 Msa0519530:three_prime_UTR 30.0%
! AATGTATTCGAATTTGGTTC+AGG + chr3_4:71732506-71732525 None:intergenic 30.0%
GAACCAAATTCGAATACATT+CGG - chr3_4:71732506-71732525 Msa0519530:three_prime_UTR 30.0%
TTCATGTTCTCTTTCAGAAT+CGG + chr3_4:71732534-71732553 None:intergenic 30.0%
! ATTCTGAAAGAGAACATGAA+AGG - chr3_4:71732534-71732553 Msa0519530:three_prime_UTR 30.0%
! TTCTGAAAGAGAACATGAAA+GGG - chr3_4:71732535-71732554 Msa0519530:three_prime_UTR 30.0%
GGAATTTGATATACAATGTG+CGG - chr3_4:71732556-71732575 Msa0519530:three_prime_UTR 30.0%
GTTATCATCTTCTTCATCAA+TGG + chr3_4:71732654-71732673 None:intergenic 30.0%
ATAATAATGTGCTAGATTGC+TGG - chr3_4:71732733-71732752 Msa0519530:CDS 30.0%
ATTCATCATTACAGAAATGG+AGG + chr3_4:71732775-71732794 None:intergenic 30.0%
AACTTTCACTCATATGACAA+GGG + chr3_4:71732913-71732932 None:intergenic 30.0%
TAACTTTCACTCATATGACA+AGG + chr3_4:71732914-71732933 None:intergenic 30.0%
GGTAAATTATTCCCAAAAGA+CGG + chr3_4:71733171-71733190 None:intergenic 30.0%
TGTAAATTATGAACTAGGCA+GGG - chr3_4:71733240-71733259 Msa0519530:intron 30.0%
!!! GTTTTTTCCCTGATTATTGT+TGG - chr3_4:71733467-71733486 Msa0519530:intron 30.0%
CAAGATAACCCAATTAATAG+CGG - chr3_4:71733506-71733525 Msa0519530:intron 30.0%
AAATCCGCTATAAGAAATAG+CGG - chr3_4:71733537-71733556 Msa0519530:intron 30.0%
ACTATTGTATACGATCATTG+CGG + chr3_4:71733589-71733608 None:intergenic 30.0%
TACATATATTGCTGCAGAAA+AGG - chr3_4:71733639-71733658 Msa0519530:intron 30.0%
TAATGATTATGTTGTGGAAG+AGG + chr3_4:71733751-71733770 None:intergenic 30.0%
!! GGATTCATTTTAGAAGTTGA+AGG + chr3_4:71733801-71733820 None:intergenic 30.0%
TATGAAATGAAGAGAGAAGA+TGG - chr3_4:71733849-71733868 Msa0519530:intron 30.0%
!!! TTTTATGCTTTTTCCCCTAA+TGG + chr3_4:71734024-71734043 None:intergenic 30.0%
! TTTTTGCATATCTGTGATAG+TGG + chr3_4:71734082-71734101 None:intergenic 30.0%
CACTATTACATATTGGGATT+TGG + chr3_4:71734170-71734189 None:intergenic 30.0%
CAAATCCCAATATGTAATAG+TGG - chr3_4:71734168-71734187 Msa0519530:intron 30.0%
GCTATACCACTATTACATAT+TGG + chr3_4:71734177-71734196 None:intergenic 30.0%
!! TTAGAGAGGTGTTAAATAAC+CGG + chr3_4:71734209-71734228 None:intergenic 30.0%
! AAGCAATTTTAGATACAGAC+TGG - chr3_4:71734475-71734494 Msa0519530:intron 30.0%
AATCCAAACATATCCGTATT+AGG + chr3_4:71734696-71734715 None:intergenic 30.0%
GATTGATGAAAAGGGATAAA+TGG - chr3_4:71734712-71734731 Msa0519530:intron 30.0%
ATGAAAAGGGATAAATGGAT+GGG - chr3_4:71734717-71734736 Msa0519530:intron 30.0%
TTGTTTGGATTGTTCAGAAT+AGG - chr3_4:71734756-71734775 Msa0519530:intron 30.0%
! ATAATTTGTGAGGCTATGTT+AGG + chr3_4:71734930-71734949 None:intergenic 30.0%
!! GATCTATCATTGTTTTACCA+TGG - chr3_4:71735128-71735147 Msa0519530:intron 30.0%
AATAAAGCAAACATTCTCCA+TGG + chr3_4:71735148-71735167 None:intergenic 30.0%
!! TTGCTTTATTTGAAGAGGTT+AGG - chr3_4:71735158-71735177 Msa0519530:intron 30.0%
! AAATGTTCCTTTTCGTAGTT+TGG - chr3_4:71735223-71735242 Msa0519530:intron 30.0%
!!! ATCTTGGTTTTAACTTTTGC+AGG - chr3_4:71735360-71735379 Msa0519530:intron 30.0%
CTTCCGAAAATTTCAAATTC+AGG + chr3_4:71735436-71735455 None:intergenic 30.0%
AAGTACACAATTGAAAGTTC+TGG - chr3_4:71735601-71735620 Msa0519530:CDS 30.0%
!! AAGTTCTGGATCACATTTAT+CGG - chr3_4:71735615-71735634 Msa0519530:CDS 30.0%
ATCACATTTATCGGATAAGT+CGG - chr3_4:71735624-71735643 Msa0519530:CDS 30.0%
AGCTTCTCAAATTATGATTC+AGG - chr3_4:71735702-71735721 Msa0519530:intron 30.0%
TAGTAGCAATTCAGATTCAA+AGG - chr3_4:71735867-71735886 Msa0519530:CDS 30.0%
!! TGATGTTTTTACCAAACATC+TGG + chr3_4:71735977-71735996 None:intergenic 30.0%
AAAACATCAAACATGGATAC+TGG - chr3_4:71735988-71736007 Msa0519530:CDS 30.0%
AAATGCTGTGATGATATTTG+AGG - chr3_4:71736060-71736079 Msa0519530:CDS 30.0%
GCAAAAAATTGTAGGGAAAA+AGG + chr3_4:71736107-71736126 None:intergenic 30.0%
!! AAACATCAGATTGCTTTTCT+TGG + chr3_4:71736201-71736220 None:intergenic 30.0%
AAATATGGGCATCTATTTCA+AGG - chr3_4:71736262-71736281 Msa0519530:CDS 30.0%
!!! TGTTTTAAGACACATCATAC+AGG - chr3_4:71736292-71736311 Msa0519530:CDS 30.0%
TGATGTTGAGGTTAAAGGTT+GGG + chr3_4:71732074-71732093 None:intergenic 35.0%
TTGATGTTGAGGTTAAAGGT+TGG + chr3_4:71732075-71732094 None:intergenic 35.0%
! GATGATGATGATGATTACGA+CGG - chr3_4:71732191-71732210 Msa0519530:three_prime_UTR 35.0%
GAAAATGATGAAACGTTGCA+AGG - chr3_4:71732287-71732306 Msa0519530:three_prime_UTR 35.0%
! AAACCCTAACTCGTCAATTT+TGG - chr3_4:71732345-71732364 Msa0519530:three_prime_UTR 35.0%
! AACCCTAACTCGTCAATTTT+GGG - chr3_4:71732346-71732365 Msa0519530:three_prime_UTR 35.0%
TGAGATGGAGAAATAGTTGA+TGG + chr3_4:71732404-71732423 None:intergenic 35.0%
TTTCTCCATCTCAACAACAA+CGG - chr3_4:71732411-71732430 Msa0519530:three_prime_UTR 35.0%
GATCCGAATGTATTCGAATT+TGG + chr3_4:71732512-71732531 None:intergenic 35.0%
TTTGATATACAATGTGCGGT+TGG - chr3_4:71732560-71732579 Msa0519530:three_prime_UTR 35.0%
! GATGAAGAAGATGATAACGA+CGG - chr3_4:71732656-71732675 Msa0519530:CDS 35.0%
!!! TGTAGATTTTGAAATGTCCG+AGG - chr3_4:71732817-71732836 Msa0519530:CDS 35.0%
CGAAATAACTAACTAACCTG+GGG + chr3_4:71733007-71733026 None:intergenic 35.0%
GCGAAATAACTAACTAACCT+GGG + chr3_4:71733008-71733027 None:intergenic 35.0%
TGCGAAATAACTAACTAACC+TGG + chr3_4:71733009-71733028 None:intergenic 35.0%
! AGAAATCCAAGCTTCAAGTT+TGG - chr3_4:71733126-71733145 Msa0519530:intron 35.0%
CTATTTCCAAACTTGAAGCT+TGG + chr3_4:71733135-71733154 None:intergenic 35.0%
! CAAGCTTCAAGTTTGGAAAT+AGG - chr3_4:71733133-71733152 Msa0519530:intron 35.0%
GTGTAAATTATGAACTAGGC+AGG - chr3_4:71733239-71733258 Msa0519530:intron 35.0%
AAGGAGTAAATGCAACAGTA+AGG + chr3_4:71733294-71733313 None:intergenic 35.0%
CTCCTTTAATTCATGTTGCT+TGG - chr3_4:71733308-71733327 Msa0519530:intron 35.0%
TAAGCCACGATATAGAAAGA+GGG + chr3_4:71733334-71733353 None:intergenic 35.0%
TTAAGCCACGATATAGAAAG+AGG + chr3_4:71733335-71733354 None:intergenic 35.0%
! AAATCTGAAGTTCTTCTCAG+AGG - chr3_4:71733388-71733407 Msa0519530:intron 35.0%
TTCTCAGAGGTTCGAATTTA+TGG - chr3_4:71733401-71733420 Msa0519530:intron 35.0%
GTGAGTTCCAACAATAATCA+GGG + chr3_4:71733477-71733496 None:intergenic 35.0%
AGTGAGTTCCAACAATAATC+AGG + chr3_4:71733478-71733497 None:intergenic 35.0%
!! CTATCCGCTATTTCTTATAG+CGG + chr3_4:71733544-71733563 None:intergenic 35.0%
TCCTCATAATCATGTCTTGA+AGG - chr3_4:71733818-71733837 Msa0519530:intron 35.0%
TCCTTCAAGACATGATTATG+AGG + chr3_4:71733822-71733841 None:intergenic 35.0%
TTAGTGATGAGAGGTTACTT+AGG - chr3_4:71733887-71733906 Msa0519530:intron 35.0%
AGTGGTTATTGCTTACATAG+CGG + chr3_4:71734064-71734083 None:intergenic 35.0%
GTCAATGTCTCAATACTCAA+TGG - chr3_4:71734243-71734262 Msa0519530:intron 35.0%
!! TGGAGTTTTTAGATACAGAC+TGG - chr3_4:71734495-71734514 Msa0519530:intron 35.0%
! TTTCTTCCTGGTGTGAATTT+TGG - chr3_4:71734594-71734613 Msa0519530:intron 35.0%
ATGCCTAATACGGATATGTT+TGG - chr3_4:71734690-71734709 Msa0519530:intron 35.0%
GATGAAAAGGGATAAATGGA+TGG - chr3_4:71734716-71734735 Msa0519530:intron 35.0%
! TGGTTGGCTAATAATTGAGT+TGG - chr3_4:71735013-71735032 Msa0519530:intron 35.0%
!!! GCTGTAGTTGTTTCTTCTTT+TGG - chr3_4:71735038-71735057 Msa0519530:intron 35.0%
CAATGAACCAAACTACGAAA+AGG + chr3_4:71735233-71735252 None:intergenic 35.0%
!!! GTTTTAACTTTTGCAGGTCA+TGG - chr3_4:71735366-71735385 Msa0519530:intron 35.0%
CAGACGATGATTCTGATTTA+GGG - chr3_4:71735755-71735774 Msa0519530:intron 35.0%
AGACGATGATTCTGATTTAG+GGG - chr3_4:71735756-71735775 Msa0519530:intron 35.0%
TAGCAATTCAGATTCAAAGG+TGG - chr3_4:71735870-71735889 Msa0519530:CDS 35.0%
TTGATTTCTTGTTCAGTGTG+AGG + chr3_4:71735943-71735962 None:intergenic 35.0%
AAAGAGAATTGCCAGATGTT+TGG - chr3_4:71735963-71735982 Msa0519530:CDS 35.0%
AGATATCGAAAACATGGTTG+TGG - chr3_4:71736235-71736254 Msa0519530:CDS 35.0%
GATATCGAAAACATGGTTGT+GGG - chr3_4:71736236-71736255 Msa0519530:CDS 35.0%
! ATGGTTGTGGGTTGAAATAT+GGG - chr3_4:71736248-71736267 Msa0519530:CDS 35.0%
ACAAAAAAGCGACCTTCGAA+TGG + chr3_4:71732106-71732125 None:intergenic 40.0%
!! TTATTTCTAGGTGAGGTGGT+TGG + chr3_4:71732248-71732267 None:intergenic 40.0%
! ACCCTAACTCGTCAATTTTG+GGG - chr3_4:71732347-71732366 Msa0519530:three_prime_UTR 40.0%
ACCCCAAAATTGACGAGTTA+GGG + chr3_4:71732351-71732370 None:intergenic 40.0%
TACCCCAAAATTGACGAGTT+AGG + chr3_4:71732352-71732371 None:intergenic 40.0%
!!! AACTCGTCAATTTTGGGGTA+TGG - chr3_4:71732352-71732371 Msa0519530:three_prime_UTR 40.0%
!! GATGGAGAAATAGTTGATGG+AGG + chr3_4:71732401-71732420 None:intergenic 40.0%
ACAATGTGCGGTTGGAATTA+CGG - chr3_4:71732568-71732587 Msa0519530:three_prime_UTR 40.0%
TTGCTATGCATCCTGAAACA+TGG - chr3_4:71732618-71732637 Msa0519530:CDS 40.0%
TATGCATCCTGAAACATGGT+TGG - chr3_4:71732622-71732641 Msa0519530:CDS 40.0%
GGAAAATCCAACCATGTTTC+AGG + chr3_4:71732632-71732651 None:intergenic 40.0%
ATCATGCTATGGTCGTTGAA+AGG - chr3_4:71732849-71732868 Msa0519530:CDS 40.0%
ATTCTTAGCGCAGCTAATCT+GGG + chr3_4:71732881-71732900 None:intergenic 40.0%
AATTCTTAGCGCAGCTAATC+TGG + chr3_4:71732882-71732901 None:intergenic 40.0%
GCACTGCTCTTATTATCTGT+TGG - chr3_4:71733026-71733045 Msa0519530:CDS 40.0%
! GCTTCAAGTTTGGAAATAGG+TGG - chr3_4:71733136-71733155 Msa0519530:intron 40.0%
GGCCAAGCAACATGAATTAA+AGG + chr3_4:71733313-71733332 None:intergenic 40.0%
!! ATAAGAAATAGCGGATAGCG+TGG - chr3_4:71733546-71733565 Msa0519530:intron 40.0%
AATGAAGAGAGAAGATGGAG+TGG - chr3_4:71733854-71733873 Msa0519530:intron 40.0%
AGAGTCAGTTTAGTGATGAG+AGG - chr3_4:71733878-71733897 Msa0519530:intron 40.0%
TATTGAGTCGGTGATGAGAT+GGG + chr3_4:71733940-71733959 None:intergenic 40.0%
ATATTGAGTCGGTGATGAGA+TGG + chr3_4:71733941-71733960 None:intergenic 40.0%
GCAAAAAACCACCACTATTG+CGG - chr3_4:71734095-71734114 Msa0519530:intron 40.0%
AGCGGAATTACAATAGCGTA+TGG - chr3_4:71734126-71734145 Msa0519530:intron 40.0%
GCGGAATTACAATAGCGTAT+GGG - chr3_4:71734127-71734146 Msa0519530:intron 40.0%
TGGAGCACACAAGAATATAC+AGG + chr3_4:71734400-71734419 None:intergenic 40.0%
GTGAGATATTGGATGGAATG+GGG + chr3_4:71734817-71734836 None:intergenic 40.0%
GGTGAGATATTGGATGGAAT+GGG + chr3_4:71734818-71734837 None:intergenic 40.0%
TGAGGCTATGTTAGGACTTA+GGG + chr3_4:71734922-71734941 None:intergenic 40.0%
TTATGACCGTGCACTTTGAT+TGG - chr3_4:71734993-71735012 Msa0519530:intron 40.0%
CATTTCAACACAACTTTCCG+AGG + chr3_4:71735208-71735227 None:intergenic 40.0%
! TAGGTGTCATCTGATAAGCT+GGG + chr3_4:71735505-71735524 None:intergenic 40.0%
! ATAGGTGTCATCTGATAAGC+TGG + chr3_4:71735506-71735525 None:intergenic 40.0%
ATGAGGCATGTCATCAGAAT+AGG + chr3_4:71735524-71735543 None:intergenic 40.0%
ATTCTGATGACATGCCTCAT+CGG - chr3_4:71735524-71735543 Msa0519530:CDS 40.0%
AACAACCTCTTTGTCTGTGA+TGG - chr3_4:71735561-71735580 Msa0519530:CDS 40.0%
ATCGGATAAGTCGGTTATTG+AGG - chr3_4:71735633-71735652 Msa0519530:CDS 40.0%
ATTCAGGACTATGTTGACGA+CGG - chr3_4:71735718-71735737 Msa0519530:intron 40.0%
CCTAAATCAGAATCATCGTC+TGG + chr3_4:71735757-71735776 None:intergenic 40.0%
CCAGACGATGATTCTGATTT+AGG - chr3_4:71735754-71735773 Msa0519530:intron 40.0%
GACGATGATTCTGATTTAGG+GGG - chr3_4:71735757-71735776 Msa0519530:intron 40.0%
TCTGATTTAGGGGGATATAC+TGG - chr3_4:71735766-71735785 Msa0519530:intron 40.0%
TATATCTTTCAGCGATCTCG+AGG - chr3_4:71735819-71735838 Msa0519530:intron 40.0%
GATCTCGAGGATGATGATTA+TGG - chr3_4:71735832-71735851 Msa0519530:intron 40.0%
! ACACGACTGAGGTGATTTTA+GGG - chr3_4:71735908-71735927 Msa0519530:CDS 40.0%
TAACTTCGCTCACCATTATG+TGG + chr3_4:71736037-71736056 None:intergenic 40.0%
CCTTGCGGCAAAAAATTGTA+GGG + chr3_4:71736114-71736133 None:intergenic 40.0%
! CATGGTTGTGGGTTGAAATA+TGG - chr3_4:71736247-71736266 Msa0519530:CDS 40.0%
!! ATGGTGGATGTAATAGGGTT+CGG - chr3_4:71736387-71736406 Msa0519530:five_prime_UTR 40.0%
! TTACGGTGGTCGTCTACTTT+TGG + chr3_4:71732028-71732047 None:intergenic 45.0%
TAAAGGTTGGGATCAGGATC+AGG + chr3_4:71732062-71732081 None:intergenic 45.0%
TGAGGTTAAAGGTTGGGATC+AGG + chr3_4:71732068-71732087 None:intergenic 45.0%
GATTCGGAGAGAGTTTGCAA+GGG + chr3_4:71732171-71732190 None:intergenic 45.0%
! GGGTTTGTTTGATTTCGTCG+AGG + chr3_4:71732331-71732350 None:intergenic 45.0%
!! GAAATAGTTGATGGAGGAGG+AGG + chr3_4:71732395-71732414 None:intergenic 45.0%
!! GGAGAAATAGTTGATGGAGG+AGG + chr3_4:71732398-71732417 None:intergenic 45.0%
! ACTTGCCGTTGTTGTTGAGA+TGG + chr3_4:71732419-71732438 None:intergenic 45.0%
! CAACAACAACGGCAAGTTGA+TGG - chr3_4:71732422-71732441 Msa0519530:three_prime_UTR 45.0%
!! TGAAGTTTTGTCTACACCCC+AGG - chr3_4:71732988-71733007 Msa0519530:CDS 45.0%
TTGGCCCTCTTTCTATATCG+TGG - chr3_4:71733327-71733346 Msa0519530:intron 45.0%
! ATAGCGTGGTGGGAAAATAG+CGG - chr3_4:71733560-71733579 Msa0519530:intron 45.0%
ATGAGAGGTTACTTAGGTCG+TGG - chr3_4:71733893-71733912 Msa0519530:intron 45.0%
TGAGAGGTTACTTAGGTCGT+GGG - chr3_4:71733894-71733913 Msa0519530:intron 45.0%
ATTGAGTCGGTGATGAGATG+GGG + chr3_4:71733939-71733958 None:intergenic 45.0%
AAATATCACGTGAGCTGCAC+AGG + chr3_4:71733992-71734011 None:intergenic 45.0%
ACTATTGCGGTGATAGGTAG+CGG - chr3_4:71734108-71734127 Msa0519530:intron 45.0%
! ATTTGGAGCAACCGTGATGA+AGG + chr3_4:71734153-71734172 None:intergenic 45.0%
! CTTCCTGGTGTGAATTTTGG+TGG - chr3_4:71734597-71734616 Msa0519530:intron 45.0%
GGGTGAGATATTGGATGGAA+TGG + chr3_4:71734819-71734838 None:intergenic 45.0%
ATTCTGCCCAAAATCCAAGG+CGG + chr3_4:71734845-71734864 None:intergenic 45.0%
! CCTTGGATTTTGGGCAGAAT+GGG - chr3_4:71734845-71734864 Msa0519530:intron 45.0%
GTGAGGCTATGTTAGGACTT+AGG + chr3_4:71734923-71734942 None:intergenic 45.0%
AGCCAACCAATCAAAGTGCA+CGG + chr3_4:71735002-71735021 None:intergenic 45.0%
TCATGGTAGCCAGATCAATG+TGG - chr3_4:71735383-71735402 Msa0519530:intron 45.0%
TTCCTGCATCCACATTGATC+TGG + chr3_4:71735395-71735414 None:intergenic 45.0%
CTATATCCGAATGTCCGATG+AGG + chr3_4:71735541-71735560 None:intergenic 45.0%
ATCTGCCATCACAGACAAAG+AGG + chr3_4:71735569-71735588 None:intergenic 45.0%
! TTGACGACGGTGATGATGAT+TGG - chr3_4:71735731-71735750 Msa0519530:intron 45.0%
AACTTCAGATGACACGACTG+AGG - chr3_4:71735897-71735916 Msa0519530:CDS 45.0%
! GACACGACTGAGGTGATTTT+AGG - chr3_4:71735907-71735926 Msa0519530:CDS 45.0%
! CACGACTGAGGTGATTTTAG+GGG - chr3_4:71735909-71735928 Msa0519530:CDS 45.0%
!!! CCCTACAATTTTTTGCCGCA+AGG - chr3_4:71736111-71736130 Msa0519530:CDS 45.0%
GCCTTGCGGCAAAAAATTGT+AGG + chr3_4:71736115-71736134 None:intergenic 45.0%
!!! CAATTTTTTGCCGCAAGGCT+AGG - chr3_4:71736116-71736135 Msa0519530:CDS 45.0%
! TGGTGGATGTAATAGGGTTC+GGG - chr3_4:71736388-71736407 Msa0519530:five_prime_UTR 45.0%
AGGATTCAGGAGAACAACAC+CGG + chr3_4:71736422-71736441 None:intergenic 45.0%
CTCCTGAATCCTAATTGCCT+TGG - chr3_4:71736430-71736449 Msa0519530:five_prime_UTR 45.0%
CACCAAGGCAATTAGGATTC+AGG + chr3_4:71736435-71736454 None:intergenic 45.0%
GTTGACACACCAAGGCAATT+AGG + chr3_4:71736442-71736461 None:intergenic 45.0%
CAAACACAGTTGACACACCA+AGG + chr3_4:71736450-71736469 None:intergenic 45.0%
! CGATTCGGAGAGAGTTTGCA+AGG + chr3_4:71732172-71732191 None:intergenic 50.0%
AGGTGAGGTGGTTGGAGATT+CGG + chr3_4:71732240-71732259 None:intergenic 50.0%
GATGAAACGTTGCAAGGTCG+TGG - chr3_4:71732293-71732312 Msa0519530:three_prime_UTR 50.0%
!! ATAGTTGATGGAGGAGGAGG+AGG + chr3_4:71732392-71732411 None:intergenic 50.0%
ATGGAACAAGCTGTGTTCCG+TGG - chr3_4:71732473-71732492 Msa0519530:three_prime_UTR 50.0%
TGGAACAAGCTGTGTTCCGT+GGG - chr3_4:71732474-71732493 Msa0519530:three_prime_UTR 50.0%
TTGGTTCAGGATCATCCCCA+CGG + chr3_4:71732493-71732512 None:intergenic 50.0%
ATGTGCGGTTGGAATTACGG+AGG - chr3_4:71732571-71732590 Msa0519530:three_prime_UTR 50.0%
AGCATGATCTCGTTGGTCCT+CGG + chr3_4:71732837-71732856 None:intergenic 50.0%
GGACCAACGAGATCATGCTA+TGG - chr3_4:71732838-71732857 Msa0519530:CDS 50.0%
CGACCATAGCATGATCTCGT+TGG + chr3_4:71732844-71732863 None:intergenic 50.0%
! TGGTTCTCGATGCCGTCTTT+TGG - chr3_4:71733156-71733175 Msa0519530:intron 50.0%
! GGTTCTCGATGCCGTCTTTT+GGG - chr3_4:71733157-71733176 Msa0519530:intron 50.0%
CACACGAGAGAGAACTACAC+AGG + chr3_4:71733192-71733211 None:intergenic 50.0%
!! AGAAATAGCGGATAGCGTGG+TGG - chr3_4:71733549-71733568 Msa0519530:intron 50.0%
!! GAAATAGCGGATAGCGTGGT+GGG - chr3_4:71733550-71733569 Msa0519530:intron 50.0%
GAGAGGTTACTTAGGTCGTG+GGG - chr3_4:71733895-71733914 Msa0519530:intron 50.0%
TTACTTAGGTCGTGGGGTTG+AGG - chr3_4:71733901-71733920 Msa0519530:intron 50.0%
TACTTAGGTCGTGGGGTTGA+GGG - chr3_4:71733902-71733921 Msa0519530:intron 50.0%
ACCACCACTATTGCGGTGAT+AGG - chr3_4:71734102-71734121 Msa0519530:intron 50.0%
ACCTATCACCGCAATAGTGG+TGG + chr3_4:71734106-71734125 None:intergenic 50.0%
GCTACCTATCACCGCAATAG+TGG + chr3_4:71734109-71734128 None:intergenic 50.0%
TAGCGTATGGGCCTTCATCA+CGG - chr3_4:71734139-71734158 Msa0519530:intron 50.0%
GTGGTATAGCGGCGTTATAC+CGG - chr3_4:71734187-71734206 Msa0519530:intron 50.0%
GAGCCACCAAAATTCACACC+AGG + chr3_4:71734603-71734622 None:intergenic 50.0%
! GCCTTGGATTTTGGGCAGAA+TGG - chr3_4:71734844-71734863 Msa0519530:intron 50.0%
CCCATTCTGCCCAAAATCCA+AGG + chr3_4:71734848-71734867 None:intergenic 50.0%
! GGATTTTGGGCAGAATGGGA+TGG - chr3_4:71734849-71734868 Msa0519530:intron 50.0%
AGGACTTAGGGAGAGTAGAG+TGG + chr3_4:71734910-71734929 None:intergenic 50.0%
GACCGTGCACTTTGATTGGT+TGG - chr3_4:71734997-71735016 Msa0519530:intron 50.0%
AGCCAGATCAATGTGGATGC+AGG - chr3_4:71735390-71735409 Msa0519530:intron 50.0%
GACATGCCTCATCGGACATT+CGG - chr3_4:71735532-71735551 Msa0519530:CDS 50.0%
!! TGAGGTGATTTTAGGGGCAC+TGG - chr3_4:71735915-71735934 Msa0519530:CDS 50.0%
!!! TTTTTTGCCGCAAGGCTAGG+TGG - chr3_4:71736119-71736138 Msa0519530:CDS 50.0%
! TTTTTGCCGCAAGGCTAGGT+GGG - chr3_4:71736120-71736139 Msa0519530:CDS 50.0%
!! TTCAAACCCACCTAGCCTTG+CGG + chr3_4:71736129-71736148 None:intergenic 50.0%
GATTCAGGAGAACAACACCG+GGG + chr3_4:71736420-71736439 None:intergenic 50.0%
GGATTCAGGAGAACAACACC+GGG + chr3_4:71736421-71736440 None:intergenic 50.0%
! ATCAGGTGGGTGCTGCGTTA+CGG + chr3_4:71732045-71732064 None:intergenic 55.0%
GGTTGGGATCAGGATCAGGT+GGG + chr3_4:71732058-71732077 None:intergenic 55.0%
AGGTTGGGATCAGGATCAGG+TGG + chr3_4:71732059-71732078 None:intergenic 55.0%
GGAACAAGCTGTGTTCCGTG+GGG - chr3_4:71732475-71732494 Msa0519530:three_prime_UTR 55.0%
TGCGGTTGGAATTACGGAGG+AGG - chr3_4:71732574-71732593 Msa0519530:three_prime_UTR 55.0%
ACTTAGGTCGTGGGGTTGAG+GGG - chr3_4:71733903-71733922 Msa0519530:intron 55.0%
GGTGGGGGTGAGATATTGGA+TGG + chr3_4:71734824-71734843 None:intergenic 55.0%
TGCCCAAAATCCAAGGCGGT+GGG + chr3_4:71734841-71734860 None:intergenic 55.0%
! GCAAGGCTAGGTGGGTTTGA+AGG - chr3_4:71736128-71736147 Msa0519530:CDS 55.0%
! TAGGGTTCGGGTTTCTACCC+CGG - chr3_4:71736400-71736419 Msa0519530:five_prime_UTR 55.0%
AGGCGGTGGGGGTGAGATAT+TGG + chr3_4:71734828-71734847 None:intergenic 60.0%
ATATCTCACCCCCACCGCCT+TGG - chr3_4:71734828-71734847 Msa0519530:intron 60.0%
! ACCCCCACCGCCTTGGATTT+TGG - chr3_4:71734835-71734854 Msa0519530:intron 60.0%
CCCAAAATCCAAGGCGGTGG+GGG + chr3_4:71734839-71734858 None:intergenic 60.0%
! CCCCCACCGCCTTGGATTTT+GGG - chr3_4:71734836-71734855 Msa0519530:intron 60.0%
GCCCAAAATCCAAGGCGGTG+GGG + chr3_4:71734840-71734859 None:intergenic 60.0%
CTGCCCAAAATCCAAGGCGG+TGG + chr3_4:71734842-71734861 None:intergenic 60.0%
! AGGTGGGTGCTGCGTTACGG+TGG + chr3_4:71732042-71732061 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 71732018 71736497 71732018 ID=Msa0519530;Name=Msa0519530
chr3_4 mRNA 71732018 71736497 71732018 ID=Msa0519530-mRNA-1;Parent=Msa0519530;Name=Msa0519530-mRNA-1;_AED=0.00;_eAED=0.00;_QI=128|1|1|1|1|1|3|600|411
chr3_4 exon 71732018 71733133 71732018 ID=Msa0519530-mRNA-1:exon:19694;Parent=Msa0519530-mRNA-1
chr3_4 exon 71735506 71735693 71735506 ID=Msa0519530-mRNA-1:exon:19693;Parent=Msa0519530-mRNA-1
chr3_4 exon 71735838 71736497 71735838 ID=Msa0519530-mRNA-1:exon:19692;Parent=Msa0519530-mRNA-1
chr3_4 five_prime_UTR 71736370 71736497 71736370 ID=Msa0519530-mRNA-1:five_prime_utr;Parent=Msa0519530-mRNA-1
chr3_4 CDS 71735838 71736369 71735838 ID=Msa0519530-mRNA-1:cds;Parent=Msa0519530-mRNA-1
chr3_4 CDS 71735506 71735693 71735506 ID=Msa0519530-mRNA-1:cds;Parent=Msa0519530-mRNA-1
chr3_4 CDS 71732618 71733133 71732618 ID=Msa0519530-mRNA-1:cds;Parent=Msa0519530-mRNA-1
chr3_4 three_prime_UTR 71732018 71732617 71732018 ID=Msa0519530-mRNA-1:three_prime_utr;Parent=Msa0519530-mRNA-1
Gene Sequence

>Msa0519530

ATGTCATCATGGTTCGCTCGTTCCCTTGCAAACTCTCTCCGAATCGATGATGATGATGATTACGACGGTGACATTCAAAACGACATCGTAACCGAATCTCCAACCACCTCACCTAGAAATAATAATGCAATTGAATCAGAAGAAAATGATGAAACGTTGCAAGGTCGTGGTGTTAAAGAAGACCTCGACGAAATCAAACAAACCCTAACTCGTCAATTTTGGGGTATGGCTTCTTTTCTCGCTCCTCCTCCTCCTCCATCAACTATTTCTCCATCTCAACAACAACGGCAAGTTGATGGCGATGTAATCTCGAATCAAAATTCTGAAATGGAACAAGCTGTGTTCCGTGGGGATGATCCTGAACCAAATTCGAATACATTCGGATCCGATTCTGAAAGAGAACATGAAAGGGAATTTGATATACAATGTGCGGTTGGAATTACGGAGGAGGTATTGACTTTTGCAATGAATATTGCTATGCATCCTGAAACATGGTTGGATTTTCCCATTGATGAAGAAGATGATAACGACGATTTTGAAATGTCCGAGGACCAACGAGATCATGCTATGGTCGTTGAAAGGCTTGCTCCCAGATTAGCTGCGCTAAGAATTGAATTGTGCCCTTGTCATATGAGTGAAAGTTACTTTTGGAAAGTCTATTTTGTACTTTTGCATTCAAGGCTTAATAAACAAGATTCTGAAGTTTTGTCTACACCCCAGGTCATGGTAGCCAGATCAATGTGGATGCAGGAATTGCAGAAACAAACAAAGCCTGAATTTGAAATTTTCGGAAGAAGTGATCTCTACTCAAGAGACAATGCTCAGCATCATGATTCTACTCCCAGCTTATCAGATGACACCTATTCTGATGACATGCCTCATCGGACATTCGGATATAGAACAACCTCTTTGTCTGTGATGGCAGATAATGAGTCTGAAAAGTACACAATTGAAAGTTCTGGATCACATTTATCGGATAAGTCGGTTATTGAGGAAAATCCAATTAATAAAACTGAAAACAAAGATCTAAAAAGTGGTCGAGCTTCTCAAATTATGATTCAGGACTATGTTGACGACGGTGATGATGATTGGCCAGACGATGATTCTGATTTAGGGGGATATACTGGAACAGCGCTCCCTATTGTGAATGAAGAAGATATATCTTTCAGCGATCTCGAGGATGATGATTATGGCATTAAACATATTAGTAGCAATTCAGATTCAAAGGTGGTGTGA
Protein sequence

>Msa0519530

MSSWFARSLANSLRIDDDDDYDGDIQNDIVTESPTTSPRNNNAIESEENDETLQGRGVKEDLDEIKQTLTRQFWGMASFLAPPPPPSTISPSQQQRQVDGDVISNQNSEMEQAVFRGDDPEPNSNTFGSDSEREHEREFDIQCAVGITEEVLTFAMNIAMHPETWLDFPIDEEDDNDDFEMSEDQRDHAMVVERLAPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKQDSEVLSTPQVMVARSMWMQELQKQTKPEFEIFGRSDLYSRDNAQHHDSTPSLSDDTYSDDMPHRTFGYRTTSLSVMADNESEKYTIESSGSHLSDKSVIEENPINKTENKDLKSGRASQIMIQDYVDDGDDDWPDDDSDLGGYTGTALPIVNEEDISFSDLEDDDYGIKHISSNSDSKVV*