Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522190 | XP_013462051.1 | 96.234 | 531 | 20 | 0 | 1 | 531 | 1 | 531 | 0.0 | 1020 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522190 | sp|Q68EH9|CRBN_DANRE | 40.609 | 197 | 113 | 2 | 326 | 518 | 211 | 407 | 7.13e-45 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522190 | A0A072V334 | 96.234 | 531 | 20 | 0 | 1 | 531 | 1 | 531 | 0.0 | 1020 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0522190 | Msa1102220 | 0.802888 | 4.529621e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522190 | MtrunA17_Chr3g0140511 | 96.234 | 531 | 20 | 0 | 1 | 531 | 1 | 531 | 0.0 | 1020 |
| Msa0522190 | MtrunA17_Chr1g0146311 | 65.932 | 499 | 138 | 5 | 57 | 526 | 59 | 554 | 0.0 | 646 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522190 | AT2G25740.1 | 54.209 | 487 | 196 | 5 | 67 | 528 | 63 | 547 | 0.0 | 525 |
| Msa0522190 | AT2G25740.2 | 54.244 | 483 | 194 | 5 | 71 | 528 | 2 | 482 | 0.0 | 520 |
Find 160 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGAGGCCTGATTCATTT+TGG | 0.120430 | 3_4:-75249166 | Msa0522190:CDS |
| TAGTTCTCTGTTTATCTTAA+AGG | 0.134777 | 3_4:+75248795 | None:intergenic |
| GTAGATCTTCCTCAATAATT+TGG | 0.165146 | 3_4:+75250847 | None:intergenic |
| ATCTGAAATCCCTCTATTTC+GGG | 0.208548 | 3_4:+75252661 | None:intergenic |
| ATCTACAAGGCAGGAGCTTT+TGG | 0.232876 | 3_4:-75249796 | Msa0522190:CDS |
| TCAGGAAATAAGATCCAATT+TGG | 0.239098 | 3_4:-75250574 | Msa0522190:CDS |
| TTCAATGCTCGAATCCAAAT+TGG | 0.250444 | 3_4:+75250560 | None:intergenic |
| GCGCCATAGAACTGCTTTCT+TGG | 0.257206 | 3_4:-75252255 | Msa0522190:CDS |
| GCATCTATTAAGCTCTTCTT+TGG | 0.258670 | 3_4:+75250509 | None:intergenic |
| GGCCGTTCTTCTTAGCCTTA+TGG | 0.260847 | 3_4:-75250876 | Msa0522190:intron |
| ATGATTCTAGTGTCAAGTTT+TGG | 0.289087 | 3_4:+75252814 | None:intergenic |
| CCGGGGCTACTCTTCCCCTT+AGG | 0.289550 | 3_4:-75251818 | Msa0522190:CDS |
| TATCTACAGATTCGACAGTA+TGG | 0.309983 | 3_4:-75251089 | Msa0522190:intron |
| GATCTGAAATCCCTCTATTT+CGG | 0.312282 | 3_4:+75252660 | None:intergenic |
| AATAGTTGGGGTACCTAGTA+TGG | 0.313980 | 3_4:-75249883 | Msa0522190:CDS |
| ATTGTTGTGCAAACTCTAAT+AGG | 0.316915 | 3_4:-75248873 | Msa0522190:three_prime_UTR |
| CGCTTGCATCGTAAAACTTT+CGG | 0.324349 | 3_4:+75251596 | None:intergenic |
| TCAGGAGTTGTACTCTTTCC+CGG | 0.337711 | 3_4:-75251837 | Msa0522190:intron |
| TGGTTAGTGGGAGAAGTAGA+TGG | 0.343295 | 3_4:+75252568 | None:intergenic |
| ACAGAATACAGCTGGTTTCC+TGG | 0.346529 | 3_4:-75249464 | Msa0522190:CDS |
| ATAAGATTTCAAAAGCATTC+TGG | 0.347520 | 3_4:-75250467 | Msa0522190:CDS |
| CTCAATAGCAGCCACAAAAC+GGG | 0.359847 | 3_4:+75251785 | None:intergenic |
| GACAACAACGATTTCATCTA+AGG | 0.363417 | 3_4:-75251028 | Msa0522190:CDS |
| CATTTCAGGTTCGGGTTCAC+AGG | 0.368965 | 3_4:-75251623 | Msa0522190:intron |
| CGGGGCTACTCTTCCCCTTA+GGG | 0.371937 | 3_4:-75251817 | Msa0522190:CDS |
| GATTTCATCTAAGGCGGTCT+TGG | 0.373402 | 3_4:-75251019 | Msa0522190:CDS |
| CGCCATACCCGACGCAGAAC+CGG | 0.377631 | 3_4:+75250644 | None:intergenic |
| CATCCAAGAAAGCAGTTCTA+TGG | 0.386957 | 3_4:+75252252 | None:intergenic |
| CAAAAGCATTCTGGCCCCAC+TGG | 0.387271 | 3_4:-75250458 | Msa0522190:CDS |
| TGCCTTGTAGATTCAGAAAC+AGG | 0.392651 | 3_4:+75249807 | None:intergenic |
| TATCTATCAGCCACTGGTTC+CGG | 0.395401 | 3_4:-75250663 | Msa0522190:CDS |
| TTTACTGATGTAATTAATAG+TGG | 0.398312 | 3_4:-75249094 | Msa0522190:three_prime_UTR |
| CTCCTATTGGCTTGCACAAA+GGG | 0.398577 | 3_4:-75250418 | Msa0522190:CDS |
| GCCTCTTTGCATACATATCT+TGG | 0.401539 | 3_4:-75252389 | Msa0522190:CDS |
| GAATTACGTACGGTTGATCT+TGG | 0.417422 | 3_4:+75252548 | None:intergenic |
| CGAATACCCCAAAATGAATC+AGG | 0.420490 | 3_4:+75249158 | None:intergenic |
| GTAGATGGAGAGTGAAGAAA+GGG | 0.426645 | 3_4:+75252583 | None:intergenic |
| TGCTACATGTAGAACCCAAA+TGG | 0.431057 | 3_4:-75249216 | Msa0522190:CDS |
| ATCGCATGTACGACTCCTAT+TGG | 0.443034 | 3_4:-75250431 | Msa0522190:CDS |
| TGTGTTCATAAAGCACTATA+TGG | 0.445295 | 3_4:-75249017 | Msa0522190:three_prime_UTR |
| ACGATGCAAGCGGCAAGCAC+TGG | 0.445704 | 3_4:-75251585 | Msa0522190:CDS |
| ACTGGTTCCGGTTCTGCGTC+GGG | 0.451784 | 3_4:-75250651 | Msa0522190:CDS |
| CTTGGTGCCTATGTGAATCC+TGG | 0.452145 | 3_4:-75249554 | Msa0522190:CDS |
| CACTGGTTCCGGTTCTGCGT+CGG | 0.454220 | 3_4:-75250652 | Msa0522190:CDS |
| TCACTCTCAAAATCCTCATC+TGG | 0.454325 | 3_4:+75250711 | None:intergenic |
| TTCCGGTTCTGCGTCGGGTA+TGG | 0.459583 | 3_4:-75250646 | Msa0522190:CDS |
| AGTAGATGGAGAGTGAAGAA+AGG | 0.460707 | 3_4:+75252582 | None:intergenic |
| ACATGTGGAAGCAAATAGTT+GGG | 0.461346 | 3_4:-75249896 | Msa0522190:CDS |
| TGAGATTGAGGAGGGACTTG+AGG | 0.464516 | 3_4:-75252689 | Msa0522190:CDS |
| GGAACCAGTGGCTGATAGAT+AGG | 0.464681 | 3_4:+75250665 | None:intergenic |
| CAGGAGTTGTACTCTTTCCC+GGG | 0.465081 | 3_4:-75251836 | Msa0522190:CDS |
| ATATGAAATGATAAAACATC+AGG | 0.465120 | 3_4:+75249843 | None:intergenic |
| TCTCAATAGCAGCCACAAAA+CGG | 0.471571 | 3_4:+75251784 | None:intergenic |
| GACATGTGGAAGCAAATAGT+TGG | 0.471891 | 3_4:-75249897 | Msa0522190:CDS |
| GGATGACTGCTTTCCAGAAG+TGG | 0.475515 | 3_4:+75250530 | None:intergenic |
| TGCAGACATGTTAAGATACA+TGG | 0.480281 | 3_4:-75250768 | Msa0522190:CDS |
| AGAACTGCTTTCTTGGATGC+TGG | 0.481005 | 3_4:-75252248 | Msa0522190:CDS |
| CAGAATACAGCTGGTTTCCT+GGG | 0.483707 | 3_4:-75249463 | Msa0522190:intron |
| CTTCATGCATAAGTCAGATC+AGG | 0.488445 | 3_4:-75250592 | Msa0522190:CDS |
| AATTACATCAGTAAAACTAA+AGG | 0.488845 | 3_4:+75249102 | None:intergenic |
| TGCCCTTTGTGCAAGCCAAT+AGG | 0.491981 | 3_4:+75250416 | None:intergenic |
| CCAATGGCTTATCTCTCGTT+GGG | 0.496202 | 3_4:-75249496 | Msa0522190:CDS |
| GTACGGTTGATCTTGGTTAG+TGG | 0.496235 | 3_4:+75252555 | None:intergenic |
| GCCAATGGCTTATCTCTCGT+TGG | 0.496816 | 3_4:-75249497 | Msa0522190:CDS |
| AGGGAAATTGAATTACTAGA+TGG | 0.497087 | 3_4:-75249744 | Msa0522190:CDS |
| TGGCTTGCACAAAGGGCAGC+AGG | 0.499919 | 3_4:-75250411 | Msa0522190:intron |
| GAGATTGAGGAGGGACTTGA+GGG | 0.500602 | 3_4:-75252688 | Msa0522190:CDS |
| CCTACCACACCAATGGTGTA+AGG | 0.506830 | 3_4:+75251738 | None:intergenic |
| CGATGCAAGCGGCAAGCACT+GGG | 0.516577 | 3_4:-75251584 | Msa0522190:CDS |
| GCATCACATATAGGTTGCGC+AGG | 0.518320 | 3_4:-75249764 | Msa0522190:CDS |
| ATATCGATGGCATCACATAT+AGG | 0.519147 | 3_4:-75249773 | Msa0522190:CDS |
| ATAATTTGGATCTCTCCATA+AGG | 0.522393 | 3_4:+75250861 | None:intergenic |
| TGGAGAGATCCAAATTATTG+AGG | 0.522653 | 3_4:-75250856 | Msa0522190:CDS |
| CGAGATAATGACTCTTTACA+AGG | 0.529930 | 3_4:-75249519 | Msa0522190:CDS |
| TTGACGAGACTATCCATACT+AGG | 0.530605 | 3_4:+75249870 | None:intergenic |
| ATGAAATCGTTGTTGTCCAC+GGG | 0.533530 | 3_4:+75251034 | None:intergenic |
| ATGTCAAATGAGGGTCCTCT+TGG | 0.534217 | 3_4:-75249572 | Msa0522190:CDS |
| AACGGGGAACAGTAACCCTA+AGG | 0.536406 | 3_4:+75251802 | None:intergenic |
| GAAAGTGAATTCATCGGATG+AGG | 0.536968 | 3_4:+75252424 | None:intergenic |
| GTTGACGTTCCTTACACCAT+TGG | 0.538622 | 3_4:-75251747 | Msa0522190:CDS |
| TACGGTTGATCTTGGTTAGT+GGG | 0.539160 | 3_4:+75252556 | None:intergenic |
| CGGTCTTGGAACGACGTTGA+CGG | 0.541422 | 3_4:-75251005 | Msa0522190:CDS |
| GATGAAATCGTTGTTGTCCA+CGG | 0.545724 | 3_4:+75251033 | None:intergenic |
| AAAAGCATTCTGGCCCCACT+GGG | 0.551775 | 3_4:-75250457 | Msa0522190:CDS |
| TGTCCGATGTAGAATATGCC+AGG | 0.556010 | 3_4:-75249712 | Msa0522190:intron |
| GAATTCATCGGATGAGGCAA+TGG | 0.556499 | 3_4:+75252430 | None:intergenic |
| ACGCCCCTTGGAGTTCTCAA+TGG | 0.558248 | 3_4:+75250825 | None:intergenic |
| CAGTATGGGCGCCTAGAGGA+TGG | 0.561771 | 3_4:-75251074 | Msa0522190:CDS |
| TGAGAGTGAGCTTTCACCAA+CGG | 0.561845 | 3_4:-75250697 | Msa0522190:CDS |
| TGTTTCTGAATCTACAAGGC+AGG | 0.563311 | 3_4:-75249805 | Msa0522190:CDS |
| TGTATTGAAAGTGAATTCAT+CGG | 0.567752 | 3_4:+75252418 | None:intergenic |
| ATCTACAGATTCGACAGTAT+GGG | 0.571244 | 3_4:-75251088 | Msa0522190:intron |
| CCTAAGGGGAAGAGTAGCCC+CGG | 0.575717 | 3_4:+75251818 | None:intergenic |
| TCTTTGCATACATATCTTGG+TGG | 0.577315 | 3_4:-75252386 | Msa0522190:intron |
| AAAACCTATCTATCAGCCAC+TGG | 0.577939 | 3_4:-75250669 | Msa0522190:CDS |
| TTGGAACGACGTTGACGGAG+TGG | 0.578672 | 3_4:-75251000 | Msa0522190:intron |
| ACTCCTATTGGCTTGCACAA+AGG | 0.579672 | 3_4:-75250419 | Msa0522190:CDS |
| ACGCAGTTACAGAATACAGC+TGG | 0.580311 | 3_4:-75249472 | Msa0522190:CDS |
| ATTTCAGGTTCGGGTTCACA+GGG | 0.581329 | 3_4:-75251622 | Msa0522190:intron |
| CGGTTCTGCGTCGGGTATGG+CGG | 0.584526 | 3_4:-75250643 | Msa0522190:CDS |
| TGATACTGAGGATGAGATTG+AGG | 0.585067 | 3_4:-75252701 | Msa0522190:CDS |
| ACGGGGAACAGTAACCCTAA+GGG | 0.585255 | 3_4:+75251803 | None:intergenic |
| ATGACTCTTTACAAGGCCAA+TGG | 0.585388 | 3_4:-75249512 | Msa0522190:CDS |
| GCTACATGTAGAACCCAAAT+GGG | 0.590599 | 3_4:-75249215 | Msa0522190:CDS |
| CTTCTCCTTCGACTTCGTAG+AGG | 0.591176 | 3_4:+75252629 | None:intergenic |
| ATATGAACCTCGTAACTACA+AGG | 0.591815 | 3_4:+75249071 | None:intergenic |
| AGAGGATGGTTCACTGAATG+TGG | 0.592726 | 3_4:-75251060 | Msa0522190:CDS |
| TACCTGTTTCTGAATCTACA+AGG | 0.597932 | 3_4:-75249809 | Msa0522190:CDS |
| TGCAAAACGAAGTGATATGT+TGG | 0.598158 | 3_4:-75249597 | Msa0522190:CDS |
| GTGAGCTTTCACCAACGGAA+AGG | 0.604444 | 3_4:-75250692 | Msa0522190:CDS |
| TGCGTTAATCTAGCTTAGTG+TGG | 0.606051 | 3_4:-75249045 | Msa0522190:three_prime_UTR |
| TGCTCATATAGCAACGTGCA+TGG | 0.606446 | 3_4:-75248965 | Msa0522190:three_prime_UTR |
| CATTCAGTGAACCATCCTCT+AGG | 0.612434 | 3_4:+75251063 | None:intergenic |
| ATATAGTGCTTTATGAACAC+AGG | 0.616091 | 3_4:+75249019 | None:intergenic |
| TATGTTGGTGATGTCAAATG+AGG | 0.617283 | 3_4:-75249582 | Msa0522190:CDS |
| CATGTAGAACCCAAATGGGA+TGG | 0.620208 | 3_4:-75249211 | Msa0522190:CDS |
| CTTGGAGAGAAAAGAGTGGA+AGG | 0.620789 | 3_4:+75252213 | None:intergenic |
| CGACGCAGAACCGGAACCAG+TGG | 0.621891 | 3_4:+75250653 | None:intergenic |
| TAGATGGAGAGTGAAGAAAG+GGG | 0.623498 | 3_4:+75252584 | None:intergenic |
| TCTACCATTGAGAACTCCAA+GGG | 0.627379 | 3_4:-75250829 | Msa0522190:CDS |
| TTGTGCAAACTCTAATAGGT+TGG | 0.629606 | 3_4:-75248869 | Msa0522190:three_prime_UTR |
| CAGTTCCTCTACGAAGTCGA+AGG | 0.632169 | 3_4:-75252634 | Msa0522190:CDS |
| GTACCTTGGAGAGAAAAGAG+TGG | 0.633983 | 3_4:+75252209 | None:intergenic |
| TGTAAAGAGTCATTATCTCG+TGG | 0.634324 | 3_4:+75249522 | None:intergenic |
| CCCAACGAGAGATAAGCCAT+TGG | 0.634977 | 3_4:+75249496 | None:intergenic |
| AAGTTAACCTACCACACCAA+TGG | 0.637348 | 3_4:+75251731 | None:intergenic |
| ATCTACCATTGAGAACTCCA+AGG | 0.639168 | 3_4:-75250830 | Msa0522190:CDS |
| CTGAAATCCCTCTATTTCGG+GGG | 0.641547 | 3_4:+75252663 | None:intergenic |
| TTCAGATGCAAATCCAGATG+AGG | 0.642126 | 3_4:-75250724 | Msa0522190:CDS |
| AAGCACTGGGACAACTGCTG+TGG | 0.642393 | 3_4:-75251571 | Msa0522190:intron |
| ACTGAGGATGAGATTGAGGA+GGG | 0.643542 | 3_4:-75252697 | Msa0522190:CDS |
| ACCAAGATATGTATGCAAAG+AGG | 0.643562 | 3_4:+75252388 | None:intergenic |
| CTAAGGGGAAGAGTAGCCCC+GGG | 0.643791 | 3_4:+75251819 | None:intergenic |
| CGGGGAACAGTAACCCTAAG+GGG | 0.644000 | 3_4:+75251804 | None:intergenic |
| TACTGAGGATGAGATTGAGG+AGG | 0.646608 | 3_4:-75252698 | Msa0522190:CDS |
| CGTTCCTTACACCATTGGTG+TGG | 0.647268 | 3_4:-75251742 | Msa0522190:intron |
| GATGTATCAGCGAACAGCAG+CGG | 0.654571 | 3_4:-75250621 | Msa0522190:CDS |
| TCAATAGCAGCCACAAAACG+GGG | 0.655620 | 3_4:+75251786 | None:intergenic |
| GTTGATAATCTGTAGACATG+TGG | 0.657388 | 3_4:-75249911 | Msa0522190:intron |
| TGTATCTTAACATGTCTGCA+AGG | 0.658706 | 3_4:+75250771 | None:intergenic |
| ATCTCGTGGACATAACCACC+AGG | 0.660799 | 3_4:+75249536 | None:intergenic |
| TCGACAGTATGGGCGCCTAG+AGG | 0.662608 | 3_4:-75251078 | Msa0522190:CDS |
| CATCACATATAGGTTGCGCA+GGG | 0.666725 | 3_4:-75249763 | Msa0522190:CDS |
| TCACTGAATGTGGTTACCCG+TGG | 0.666796 | 3_4:-75251050 | Msa0522190:CDS |
| TGAGAATGAAGTCGATACGT+AGG | 0.668046 | 3_4:+75252768 | None:intergenic |
| GTACATGCGATAAACCCAGT+GGG | 0.668415 | 3_4:+75250443 | None:intergenic |
| AGGAGTTGTACTCTTTCCCG+GGG | 0.669162 | 3_4:-75251835 | Msa0522190:CDS |
| TTACCTGGCATATTCTACAT+CGG | 0.675105 | 3_4:+75249709 | None:intergenic |
| ATAACCACCAGGATTCACAT+AGG | 0.678095 | 3_4:+75249547 | None:intergenic |
| GGTGCCTATGTGAATCCTGG+TGG | 0.679597 | 3_4:-75249551 | Msa0522190:CDS |
| TCTGAAATCCCTCTATTTCG+GGG | 0.681892 | 3_4:+75252662 | None:intergenic |
| GTATCGACTTCATTCTCACA+AGG | 0.689259 | 3_4:-75252763 | Msa0522190:five_prime_UTR |
| ATAGTGGCCTTGTAGTTACG+AGG | 0.690908 | 3_4:-75249078 | Msa0522190:three_prime_UTR |
| GGATTCACATAGGCACCAAG+AGG | 0.693126 | 3_4:+75249557 | None:intergenic |
| AACAACGATTTCATCTAAGG+CGG | 0.700763 | 3_4:-75251025 | Msa0522190:CDS |
| CATGTGGAAGCAAATAGTTG+GGG | 0.707600 | 3_4:-75249895 | Msa0522190:CDS |
| ATGTTGGTGATGTCAAATGA+GGG | 0.709622 | 3_4:-75249581 | Msa0522190:CDS |
| TACATGCGATAAACCCAGTG+GGG | 0.730042 | 3_4:+75250444 | None:intergenic |
| CGTACATGCGATAAACCCAG+TGG | 0.742112 | 3_4:+75250442 | None:intergenic |
| CTACCATTGAGAACTCCAAG+GGG | 0.751682 | 3_4:-75250828 | Msa0522190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAATTATTTATAAAAAA+CGG | + | chr3_4:75251566-75251585 | None:intergenic | 0.0% |
| !!! | TTTTATTTAAAAATTATACG+TGG | + | chr3_4:75250152-75250171 | None:intergenic | 10.0% |
| !!! | ATTTTTAAATAAAAAATGAG+TGG | - | chr3_4:75250158-75250177 | Msa0522190:intron | 10.0% |
| !! | TTATATTTATCTCTAAATAT+CGG | - | chr3_4:75251588-75251607 | Msa0522190:CDS | 10.0% |
| !! | AATTCAAACAAAAATCTAAA+TGG | - | chr3_4:75251378-75251397 | Msa0522190:intron | 15.0% |
| !! | AAATTATTTATAAAAAACGG+AGG | + | chr3_4:75251563-75251582 | None:intergenic | 15.0% |
| !! | ATATTTGAATAGTTCAGAAT+AGG | + | chr3_4:75249123-75249142 | None:intergenic | 20.0% |
| !!! | ATTTTATTATGCAGTAACAA+TGG | - | chr3_4:75249170-75249189 | Msa0522190:CDS | 20.0% |
| !!! | GTACGCAATTAATAATTTTA+TGG | - | chr3_4:75249264-75249283 | Msa0522190:intron | 20.0% |
| !! | AAAAATAGTATTTAGTACCT+TGG | + | chr3_4:75249436-75249455 | None:intergenic | 20.0% |
| !! | AATTAGATATTGTACTTTCA+GGG | - | chr3_4:75249597-75249616 | Msa0522190:CDS | 20.0% |
| !!! | ATTATTAAAAAGGCATGATA+AGG | + | chr3_4:75249726-75249745 | None:intergenic | 20.0% |
| !!! | TTTTTCATAAAAAACCATCA+TGG | - | chr3_4:75249963-75249982 | Msa0522190:intron | 20.0% |
| !! | TATCTCTAAATATGTCTTAA+TGG | + | chr3_4:75250231-75250250 | None:intergenic | 20.0% |
| !! | AGAAATTAATTTAACTCTGT+TGG | + | chr3_4:75250366-75250385 | None:intergenic | 20.0% |
| !! | TATTACTTGTATTTCAGAAA+TGG | - | chr3_4:75251417-75251436 | Msa0522190:intron | 20.0% |
| !! | ATATGAAATGATAAAACATC+AGG | + | chr3_4:75251788-75251807 | None:intergenic | 20.0% |
| !! | AATTACATCAGTAAAACTAA+AGG | + | chr3_4:75252529-75252548 | None:intergenic | 20.0% |
| !! | TTTACTGATGTAATTAATAG+TGG | - | chr3_4:75252534-75252553 | Msa0522190:intron | 20.0% |
| !!! | ACAAGTTAATGAGTTTTTTT+AGG | - | chr3_4:75252707-75252726 | Msa0522190:CDS | 20.0% |
| ! | TGTATTGAAAGTGAATTCAT+CGG | + | chr3_4:75249213-75249232 | None:intergenic | 25.0% |
| ! | CAATTAGATATTGTACTTTC+AGG | - | chr3_4:75249596-75249615 | Msa0522190:CDS | 25.0% |
| ! | CTAAATATGTCTTAATGGTT+TGG | + | chr3_4:75250226-75250245 | None:intergenic | 25.0% |
| ! | TTTGAACTTGATACATGATT+AGG | - | chr3_4:75250261-75250280 | Msa0522190:intron | 25.0% |
| ! | TACTGTAACTTGAAAATACA+GGG | + | chr3_4:75250450-75250469 | None:intergenic | 25.0% |
| ! | ATACTGTAACTTGAAAATAC+AGG | + | chr3_4:75250451-75250470 | None:intergenic | 25.0% |
| ! | CGAGTGGATAATAATAAAAA+GGG | + | chr3_4:75250679-75250698 | None:intergenic | 25.0% |
| ! | ACGAGTGGATAATAATAAAA+AGG | + | chr3_4:75250680-75250699 | None:intergenic | 25.0% |
| ! | AAGATACATGGCTTAAAAAA+TGG | - | chr3_4:75250872-75250891 | Msa0522190:intron | 25.0% |
| !!! | ATAAGATTTCAAAAGCATTC+TGG | - | chr3_4:75251161-75251180 | Msa0522190:intron | 25.0% |
| ! | AATATGATGTGCAAAATTGT+GGG | + | chr3_4:75251964-75251983 | None:intergenic | 25.0% |
| ! | TAAAATCACAGGCATAAAAA+TGG | + | chr3_4:75252202-75252221 | None:intergenic | 25.0% |
| !! | TTTTTATGCCTGTGATTTTA+TGG | - | chr3_4:75252202-75252221 | Msa0522190:intron | 25.0% |
| ! | CTCAGAATGTTACATAATTT+GGG | - | chr3_4:75252294-75252313 | Msa0522190:intron | 25.0% |
| !!! | ATTTGTCAAAATGCTACTTT+TGG | - | chr3_4:75252362-75252381 | Msa0522190:intron | 25.0% |
| ! | ATGATTCTAGTGTCAAGTTT+TGG | + | chr3_4:75248817-75248836 | None:intergenic | 30.0% |
| AGAAAAAATGGATGATACTG+AGG | - | chr3_4:75248915-75248934 | Msa0522190:three_prime_UTR | 30.0% | |
| TTGAATAGTTCAGAATAGGA+AGG | + | chr3_4:75249119-75249138 | None:intergenic | 30.0% | |
| TCATCCATCATTTGAATCAT+AGG | - | chr3_4:75249645-75249664 | Msa0522190:intron | 30.0% | |
| AATGCCTATGATTCAAATGA+TGG | + | chr3_4:75249652-75249671 | None:intergenic | 30.0% | |
| ! | GTCGATATTATTGCGTATTT+TGG | - | chr3_4:75249679-75249698 | Msa0522190:intron | 30.0% |
| !! | GATATTATTGCGTATTTTGG+AGG | - | chr3_4:75249682-75249701 | Msa0522190:intron | 30.0% |
| ! | AAGTTTGATTGTTGTTGATG+TGG | - | chr3_4:75250332-75250351 | Msa0522190:intron | 30.0% |
| ATAATTTGGATCTCTCCATA+AGG | + | chr3_4:75250770-75250789 | None:intergenic | 30.0% | |
| GTAGATCTTCCTCAATAATT+TGG | + | chr3_4:75250784-75250803 | None:intergenic | 30.0% | |
| TCAGGAAATAAGATCCAATT+TGG | - | chr3_4:75251054-75251073 | Msa0522190:CDS | 30.0% | |
| ATTGAAAAATGTTCCACTTC+TGG | - | chr3_4:75251085-75251104 | Msa0522190:intron | 30.0% | |
| AGTGATGTCATAACAAAGAA+GGG | + | chr3_4:75251297-75251316 | None:intergenic | 30.0% | |
| TTGTTATGACATCACTGTTA+TGG | - | chr3_4:75251301-75251320 | Msa0522190:intron | 30.0% | |
| TGTTATGACATCACTGTTAT+GGG | - | chr3_4:75251302-75251321 | Msa0522190:intron | 30.0% | |
| GTATTTCAGAAATGGTTATG+TGG | - | chr3_4:75251425-75251444 | Msa0522190:intron | 30.0% | |
| !! | GTTGATAATCTGTAGATATG+TGG | - | chr3_4:75251661-75251680 | Msa0522190:intron | 30.0% |
| ! | TTCAGAAACAGGTATTTTAC+TGG | + | chr3_4:75251813-75251832 | None:intergenic | 30.0% |
| AGGGAAATTGAATTACTAGA+TGG | - | chr3_4:75251884-75251903 | Msa0522190:intron | 30.0% | |
| ATATGATGTGCAAAATTGTG+GGG | + | chr3_4:75251963-75251982 | None:intergenic | 30.0% | |
| CAATATGATGTGCAAAATTG+TGG | + | chr3_4:75251965-75251984 | None:intergenic | 30.0% | |
| ! | TGTTACTTCCATAAAATCAC+AGG | + | chr3_4:75252213-75252232 | None:intergenic | 30.0% |
| AAGCTGTTTACTATGTATCA+AGG | - | chr3_4:75252232-75252251 | Msa0522190:CDS | 30.0% | |
| AGCTGTTTACTATGTATCAA+GGG | - | chr3_4:75252233-75252252 | Msa0522190:CDS | 30.0% | |
| GCTCAGAATGTTACATAATT+TGG | - | chr3_4:75252293-75252312 | Msa0522190:intron | 30.0% | |
| AATGTTACATAATTTGGGAG+TGG | - | chr3_4:75252299-75252318 | Msa0522190:intron | 30.0% | |
| ATGTTACATAATTTGGGAGT+GGG | - | chr3_4:75252300-75252319 | Msa0522190:intron | 30.0% | |
| ATATAGTGCTTTATGAACAC+AGG | + | chr3_4:75252612-75252631 | None:intergenic | 30.0% | |
| ! | TGTGTTCATAAAGCACTATA+TGG | - | chr3_4:75252611-75252630 | Msa0522190:CDS | 30.0% |
| ATTGTTGTGCAAACTCTAAT+AGG | - | chr3_4:75252755-75252774 | Msa0522190:five_prime_UTR | 30.0% | |
| GTCGAATATCGCAGAAAAAA+TGG | - | chr3_4:75248903-75248922 | Msa0522190:three_prime_UTR | 35.0% | |
| ! | ATCTGAAATCCCTCTATTTC+GGG | + | chr3_4:75248970-75248989 | None:intergenic | 35.0% |
| ! | GATCTGAAATCCCTCTATTT+CGG | + | chr3_4:75248971-75248990 | None:intergenic | 35.0% |
| GTGAAGGAAAGAATTACGTA+CGG | + | chr3_4:75249093-75249112 | None:intergenic | 35.0% | |
| ACCAAGATATGTATGCAAAG+AGG | + | chr3_4:75249243-75249262 | None:intergenic | 35.0% | |
| TCTTTGCATACATATCTTGG+TGG | - | chr3_4:75249242-75249261 | Msa0522190:CDS | 35.0% | |
| !! | TGTTTTGCGATTGTGTTGTT+TGG | - | chr3_4:75249293-75249312 | Msa0522190:intron | 35.0% |
| GACTATTCCTTGCAATATTC+AGG | - | chr3_4:75249773-75249792 | Msa0522190:CDS | 35.0% | |
| TACAACTCCTGAATATTGCA+AGG | + | chr3_4:75249783-75249802 | None:intergenic | 35.0% | |
| ! | AAAAAACCATCATGGTGTCA+TGG | - | chr3_4:75249971-75249990 | Msa0522190:intron | 35.0% |
| ! | TGGATGTGCATTTTCATTTC+AGG | - | chr3_4:75249991-75250010 | Msa0522190:intron | 35.0% |
| !!! | GTGCATTTTCATTTCAGGTT+CGG | - | chr3_4:75249996-75250015 | Msa0522190:intron | 35.0% |
| !!! | TGCATTTTCATTTCAGGTTC+GGG | - | chr3_4:75249997-75250016 | Msa0522190:intron | 35.0% |
| CTGTGGTATTCTATCTCATT+GGG | - | chr3_4:75250074-75250093 | Msa0522190:intron | 35.0% | |
| ! | ATATGTCTTAATGGTTTGGC+CGG | + | chr3_4:75250222-75250241 | None:intergenic | 35.0% |
| GGTTGACTGCATAGATATAA+TGG | + | chr3_4:75250297-75250316 | None:intergenic | 35.0% | |
| ! | ATTGTTGTTGATGTGGACTT+GGG | - | chr3_4:75250339-75250358 | Msa0522190:intron | 35.0% |
| AACTTGAAAATACAGGGAAC+TGG | + | chr3_4:75250444-75250463 | None:intergenic | 35.0% | |
| TTCTTAGTCCTTTCCTAGTT+AGG | - | chr3_4:75250470-75250489 | Msa0522190:CDS | 35.0% | |
| TATCTACAGATTCGACAGTA+TGG | - | chr3_4:75250539-75250558 | Msa0522190:CDS | 35.0% | |
| ATCTACAGATTCGACAGTAT+GGG | - | chr3_4:75250540-75250559 | Msa0522190:CDS | 35.0% | |
| GACAACAACGATTTCATCTA+AGG | - | chr3_4:75250600-75250619 | Msa0522190:CDS | 35.0% | |
| AACAACGATTTCATCTAAGG+CGG | - | chr3_4:75250603-75250622 | Msa0522190:CDS | 35.0% | |
| ! | ACGACTTCCTTTTCTTTGTT+TGG | - | chr3_4:75250725-75250744 | Msa0522190:CDS | 35.0% |
| !! | TCCTTTTCTTTGTTTGGTTG+TGG | - | chr3_4:75250731-75250750 | Msa0522190:CDS | 35.0% |
| TGGAGAGATCCAAATTATTG+AGG | - | chr3_4:75250772-75250791 | Msa0522190:CDS | 35.0% | |
| TGTATCTTAACATGTCTGCA+AGG | + | chr3_4:75250860-75250879 | None:intergenic | 35.0% | |
| TGCAGACATGTTAAGATACA+TGG | - | chr3_4:75250860-75250879 | Msa0522190:CDS | 35.0% | |
| TTCAATGCTCGAATCCAAAT+TGG | + | chr3_4:75251071-75251090 | None:intergenic | 35.0% | |
| GCATCTATTAAGCTCTTCTT+TGG | + | chr3_4:75251122-75251141 | None:intergenic | 35.0% | |
| TGATGTCATAACAAAGAAGG+GGG | + | chr3_4:75251295-75251314 | None:intergenic | 35.0% | |
| GTGATGTCATAACAAAGAAG+GGG | + | chr3_4:75251296-75251315 | None:intergenic | 35.0% | |
| CAGTGATGTCATAACAAAGA+AGG | + | chr3_4:75251298-75251317 | None:intergenic | 35.0% | |
| ! | ATGACGTTGTGCTTTTCTTT+TGG | - | chr3_4:75251328-75251347 | Msa0522190:intron | 35.0% |
| ! | TGACGTTGTGCTTTTCTTTT+GGG | - | chr3_4:75251329-75251348 | Msa0522190:intron | 35.0% |
| !! | GTTGATAATCTGTAGACATG+TGG | - | chr3_4:75251717-75251736 | Msa0522190:intron | 35.0% |
| ACATGTGGAAGCAAATAGTT+GGG | - | chr3_4:75251732-75251751 | Msa0522190:intron | 35.0% | |
| !! | TACCTGTTTCTGAATCTACA+AGG | - | chr3_4:75251819-75251838 | Msa0522190:CDS | 35.0% |
| ATATCGATGGCATCACATAT+AGG | - | chr3_4:75251855-75251874 | Msa0522190:intron | 35.0% | |
| TTACCTGGCATATTCTACAT+CGG | + | chr3_4:75251922-75251941 | None:intergenic | 35.0% | |
| TTGGTGAGAAAATGATTACC+TGG | + | chr3_4:75251937-75251956 | None:intergenic | 35.0% | |
| TATGATGTGCAAAATTGTGG+GGG | + | chr3_4:75251962-75251981 | None:intergenic | 35.0% | |
| TGCAAAACGAAGTGATATGT+TGG | - | chr3_4:75252031-75252050 | Msa0522190:intron | 35.0% | |
| !! | TATGTTGGTGATGTCAAATG+AGG | - | chr3_4:75252046-75252065 | Msa0522190:intron | 35.0% |
| !! | ATGTTGGTGATGTCAAATGA+GGG | - | chr3_4:75252047-75252066 | Msa0522190:intron | 35.0% |
| TGTAAAGAGTCATTATCTCG+TGG | + | chr3_4:75252109-75252128 | None:intergenic | 35.0% | |
| CGAGATAATGACTCTTTACA+AGG | - | chr3_4:75252109-75252128 | Msa0522190:intron | 35.0% | |
| CTAATTCTCACAAAGCTTCA+GGG | + | chr3_4:75252274-75252293 | None:intergenic | 35.0% | |
| TGTAAAAAGCCATCCCATTT+GGG | + | chr3_4:75252429-75252448 | None:intergenic | 35.0% | |
| TTGTAAAAAGCCATCCCATT+TGG | + | chr3_4:75252430-75252449 | None:intergenic | 35.0% | |
| !!! | CTGATTCATTTTGGGGTATT+CGG | - | chr3_4:75252471-75252490 | Msa0522190:intron | 35.0% |
| ATATGAACCTCGTAACTACA+AGG | + | chr3_4:75252560-75252579 | None:intergenic | 35.0% | |
| TTGTGCAAACTCTAATAGGT+TGG | - | chr3_4:75252759-75252778 | Msa0522190:five_prime_UTR | 35.0% | |
| !!! | CTAGTGTCAAGTTTTGGACT+CGG | + | chr3_4:75248811-75248830 | None:intergenic | 40.0% |
| TGAGAATGAAGTCGATACGT+AGG | + | chr3_4:75248863-75248882 | None:intergenic | 40.0% | |
| !! | GTATCGACTTCATTCTCACA+AGG | - | chr3_4:75248865-75248884 | Msa0522190:three_prime_UTR | 40.0% |
| TGATACTGAGGATGAGATTG+AGG | - | chr3_4:75248927-75248946 | Msa0522190:three_prime_UTR | 40.0% | |
| ! | TCTGAAATCCCTCTATTTCG+GGG | + | chr3_4:75248969-75248988 | None:intergenic | 40.0% |
| TAGATGGAGAGTGAAGAAAG+GGG | + | chr3_4:75249047-75249066 | None:intergenic | 40.0% | |
| GTAGATGGAGAGTGAAGAAA+GGG | + | chr3_4:75249048-75249067 | None:intergenic | 40.0% | |
| AGTAGATGGAGAGTGAAGAA+AGG | + | chr3_4:75249049-75249068 | None:intergenic | 40.0% | |
| TACGGTTGATCTTGGTTAGT+GGG | + | chr3_4:75249075-75249094 | None:intergenic | 40.0% | |
| GAATTACGTACGGTTGATCT+TGG | + | chr3_4:75249083-75249102 | None:intergenic | 40.0% | |
| GAAAGTGAATTCATCGGATG+AGG | + | chr3_4:75249207-75249226 | None:intergenic | 40.0% | |
| GCCTCTTTGCATACATATCT+TGG | - | chr3_4:75249239-75249258 | Msa0522190:CDS | 40.0% | |
| CATCCAAGAAAGCAGTTCTA+TGG | + | chr3_4:75249379-75249398 | None:intergenic | 40.0% | |
| AACAAGAAGAACAACCAGTG+TGG | + | chr3_4:75249491-75249510 | None:intergenic | 40.0% | |
| ACTCATGCATACGCTCTTAT+AGG | - | chr3_4:75249557-75249576 | Msa0522190:CDS | 40.0% | |
| ATGCATACGCTCTTATAGGA+AGG | - | chr3_4:75249561-75249580 | Msa0522190:CDS | 40.0% | |
| TCTCAATAGCAGCCACAAAA+CGG | + | chr3_4:75249847-75249866 | None:intergenic | 40.0% | |
| AAGTTAACCTACCACACCAA+TGG | + | chr3_4:75249900-75249919 | None:intergenic | 40.0% | |
| AAAATCTCAGTCAACTGCTG+TGG | + | chr3_4:75249934-75249953 | None:intergenic | 40.0% | |
| CGCTTGCATCGTAAAACTTT+CGG | + | chr3_4:75250035-75250054 | None:intergenic | 40.0% | |
| ! | CGAAAGTTTTACGATGCAAG+CGG | - | chr3_4:75250033-75250052 | Msa0522190:intron | 40.0% |
| GCTGTGGTATTCTATCTCAT+TGG | - | chr3_4:75250073-75250092 | Msa0522190:intron | 40.0% | |
| ATGAGTGGTCCAATAGTTAG+AGG | - | chr3_4:75250173-75250192 | Msa0522190:intron | 40.0% | |
| GTCCAATAGTTAGAGGCAAA+TGG | - | chr3_4:75250180-75250199 | Msa0522190:intron | 40.0% | |
| CTCCATTTGCCTCTAACTAT+TGG | + | chr3_4:75250185-75250204 | None:intergenic | 40.0% | |
| TGGAGACTGAGAAAATTCAC+CGG | - | chr3_4:75250200-75250219 | Msa0522190:intron | 40.0% | |
| AAACTTTATCCCACTAGACG+CGG | + | chr3_4:75250318-75250337 | None:intergenic | 40.0% | |
| ! | GATTGTTGTTGATGTGGACT+TGG | - | chr3_4:75250338-75250357 | Msa0522190:intron | 40.0% |
| CATTGCTGTATTGCAAAAGC+AGG | + | chr3_4:75250415-75250434 | None:intergenic | 40.0% | |
| CACTGATACCTAACTAGGAA+AGG | + | chr3_4:75250481-75250500 | None:intergenic | 40.0% | |
| ATCGACACTGATACCTAACT+AGG | + | chr3_4:75250486-75250505 | None:intergenic | 40.0% | |
| ATGAAATCGTTGTTGTCCAC+GGG | + | chr3_4:75250597-75250616 | None:intergenic | 40.0% | |
| GATGAAATCGTTGTTGTCCA+CGG | + | chr3_4:75250598-75250617 | None:intergenic | 40.0% | |
| GCCACAACCAAACAAAGAAA+AGG | + | chr3_4:75250735-75250754 | None:intergenic | 40.0% | |
| CTCCATAAGGCTAAGAAGAA+CGG | + | chr3_4:75250757-75250776 | None:intergenic | 40.0% | |
| ATCTACCATTGAGAACTCCA+AGG | - | chr3_4:75250798-75250817 | Msa0522190:CDS | 40.0% | |
| TCTACCATTGAGAACTCCAA+GGG | - | chr3_4:75250799-75250818 | Msa0522190:CDS | 40.0% | |
| TTCAGATGCAAATCCAGATG+AGG | - | chr3_4:75250904-75250923 | Msa0522190:intron | 40.0% | |
| TCACTCTCAAAATCCTCATC+TGG | + | chr3_4:75250920-75250939 | None:intergenic | 40.0% | |
| ! | AGATAGGTTTTCCTTTCCGT+TGG | + | chr3_4:75250950-75250969 | None:intergenic | 40.0% |
| AAAACCTATCTATCAGCCAC+TGG | - | chr3_4:75250959-75250978 | Msa0522190:intron | 40.0% | |
| CTTCATGCATAAGTCAGATC+AGG | - | chr3_4:75251036-75251055 | Msa0522190:CDS | 40.0% | |
| CATAACAAAGAAGGGGGAAA+AGG | + | chr3_4:75251289-75251308 | None:intergenic | 40.0% | |
| CCAGAAAACAAGAACGTATG+AGG | + | chr3_4:75251534-75251553 | None:intergenic | 40.0% | |
| !!! | CCTCATACGTTCTTGTTTTC+TGG | - | chr3_4:75251531-75251550 | Msa0522190:intron | 40.0% |
| GACATGTGGAAGCAAATAGT+TGG | - | chr3_4:75251731-75251750 | Msa0522190:intron | 40.0% | |
| CATGTGGAAGCAAATAGTTG+GGG | - | chr3_4:75251733-75251752 | Msa0522190:intron | 40.0% | |
| ! | AATAGTTGGGGTACCTAGTA+TGG | - | chr3_4:75251745-75251764 | Msa0522190:CDS | 40.0% |
| TTGACGAGACTATCCATACT+AGG | + | chr3_4:75251761-75251780 | None:intergenic | 40.0% | |
| TGCCTTGTAGATTCAGAAAC+AGG | + | chr3_4:75251824-75251843 | None:intergenic | 40.0% | |
| ! | TGTTTCTGAATCTACAAGGC+AGG | - | chr3_4:75251823-75251842 | Msa0522190:CDS | 40.0% |
| ATAACCACCAGGATTCACAT+AGG | + | chr3_4:75252084-75252103 | None:intergenic | 40.0% | |
| ATGACTCTTTACAAGGCCAA+TGG | - | chr3_4:75252116-75252135 | Msa0522190:intron | 40.0% | |
| !! | AAATGGACTAAAACTCACCC+AGG | + | chr3_4:75252185-75252204 | None:intergenic | 40.0% |
| GCTAATTCTCACAAAGCTTC+AGG | + | chr3_4:75252275-75252294 | None:intergenic | 40.0% | |
| !! | CTACTTTTGGCAGATATGCA+TGG | - | chr3_4:75252375-75252394 | Msa0522190:intron | 40.0% |
| TGCTACATGTAGAACCCAAA+TGG | - | chr3_4:75252412-75252431 | Msa0522190:CDS | 40.0% | |
| GCTACATGTAGAACCCAAAT+GGG | - | chr3_4:75252413-75252432 | Msa0522190:CDS | 40.0% | |
| CAACCACCAACAAAAAACTG+AGG | - | chr3_4:75252447-75252466 | Msa0522190:CDS | 40.0% | |
| !!! | ATCAGGCCTCAGTTTTTTGT+TGG | + | chr3_4:75252456-75252475 | None:intergenic | 40.0% |
| ! | AACTGAGGCCTGATTCATTT+TGG | - | chr3_4:75252462-75252481 | Msa0522190:intron | 40.0% |
| ! | ACTGAGGCCTGATTCATTTT+GGG | - | chr3_4:75252463-75252482 | Msa0522190:intron | 40.0% |
| CGAATACCCCAAAATGAATC+AGG | + | chr3_4:75252473-75252492 | None:intergenic | 40.0% | |
| ! | TGCGTTAATCTAGCTTAGTG+TGG | - | chr3_4:75252583-75252602 | Msa0522190:CDS | 40.0% |
| TACTGAGGATGAGATTGAGG+AGG | - | chr3_4:75248930-75248949 | Msa0522190:three_prime_UTR | 45.0% | |
| ACTGAGGATGAGATTGAGGA+GGG | - | chr3_4:75248931-75248950 | Msa0522190:three_prime_UTR | 45.0% | |
| CTGAAATCCCTCTATTTCGG+GGG | + | chr3_4:75248968-75248987 | None:intergenic | 45.0% | |
| TGGTTAGTGGGAGAAGTAGA+TGG | + | chr3_4:75249063-75249082 | None:intergenic | 45.0% | |
| GTACGGTTGATCTTGGTTAG+TGG | + | chr3_4:75249076-75249095 | None:intergenic | 45.0% | |
| CAGAATAGGAAGGTGAGTGA+AGG | + | chr3_4:75249109-75249128 | None:intergenic | 45.0% | |
| GAATTCATCGGATGAGGCAA+TGG | + | chr3_4:75249201-75249220 | None:intergenic | 45.0% | |
| AGAACTGCTTTCTTGGATGC+TGG | - | chr3_4:75249380-75249399 | Msa0522190:intron | 45.0% | |
| CTTGGAGAGAAAAGAGTGGA+AGG | + | chr3_4:75249418-75249437 | None:intergenic | 45.0% | |
| ! | CTTCCACTCTTTTCTCTCCA+AGG | - | chr3_4:75249416-75249435 | Msa0522190:intron | 45.0% |
| GTACCTTGGAGAGAAAAGAG+TGG | + | chr3_4:75249422-75249441 | None:intergenic | 45.0% | |
| CTTCTATCTTGCTTCCACAC+TGG | - | chr3_4:75249474-75249493 | Msa0522190:CDS | 45.0% | |
| TCAGGAGTTGTACTCTTTCC+CGG | - | chr3_4:75249791-75249810 | Msa0522190:CDS | 45.0% | |
| TCAATAGCAGCCACAAAACG+GGG | + | chr3_4:75249845-75249864 | None:intergenic | 45.0% | |
| CTCAATAGCAGCCACAAAAC+GGG | + | chr3_4:75249846-75249865 | None:intergenic | 45.0% | |
| GTTGACGTTCCTTACACCAT+TGG | - | chr3_4:75249881-75249900 | Msa0522190:CDS | 45.0% | |
| !! | ATTTCAGGTTCGGGTTCACA+GGG | - | chr3_4:75250006-75250025 | Msa0522190:intron | 45.0% |
| CATTCAGTGAACCATCCTCT+AGG | + | chr3_4:75250568-75250587 | None:intergenic | 45.0% | |
| AGAGGATGGTTCACTGAATG+TGG | - | chr3_4:75250568-75250587 | Msa0522190:CDS | 45.0% | |
| ! | GATTTCATCTAAGGCGGTCT+TGG | - | chr3_4:75250609-75250628 | Msa0522190:CDS | 45.0% |
| GTCGTCAATCTTTAGCTGCA+CGG | + | chr3_4:75250710-75250729 | None:intergenic | 45.0% | |
| CTACCATTGAGAACTCCAAG+GGG | - | chr3_4:75250800-75250819 | Msa0522190:CDS | 45.0% | |
| TGAGAGTGAGCTTTCACCAA+CGG | - | chr3_4:75250931-75250950 | Msa0522190:intron | 45.0% | |
| !! | TATCTATCAGCCACTGGTTC+CGG | - | chr3_4:75250965-75250984 | Msa0522190:intron | 45.0% |
| TACATGCGATAAACCCAGTG+GGG | + | chr3_4:75251187-75251206 | None:intergenic | 45.0% | |
| GTACATGCGATAAACCCAGT+GGG | + | chr3_4:75251188-75251207 | None:intergenic | 45.0% | |
| ATCGCATGTACGACTCCTAT+TGG | - | chr3_4:75251197-75251216 | Msa0522190:intron | 45.0% | |
| !! | ACTCCTATTGGCTTGCACAA+AGG | - | chr3_4:75251209-75251228 | Msa0522190:intron | 45.0% |
| !! | CTCCTATTGGCTTGCACAAA+GGG | - | chr3_4:75251210-75251229 | Msa0522190:intron | 45.0% |
| ! | ATCTACAAGGCAGGAGCTTT+TGG | - | chr3_4:75251832-75251851 | Msa0522190:CDS | 45.0% |
| ! | CAGGAGCTTTTGGATATCGA+TGG | - | chr3_4:75251842-75251861 | Msa0522190:intron | 45.0% |
| CATCACATATAGGTTGCGCA+GGG | - | chr3_4:75251865-75251884 | Msa0522190:intron | 45.0% | |
| TGTCCGATGTAGAATATGCC+AGG | - | chr3_4:75251916-75251935 | Msa0522190:intron | 45.0% | |
| ATGTCAAATGAGGGTCCTCT+TGG | - | chr3_4:75252056-75252075 | Msa0522190:intron | 45.0% | |
| CCAATGGCTTATCTCTCGTT+GGG | - | chr3_4:75252132-75252151 | Msa0522190:intron | 45.0% | |
| ACGCAGTTACAGAATACAGC+TGG | - | chr3_4:75252156-75252175 | Msa0522190:intron | 45.0% | |
| ! | ACAGAATACAGCTGGTTTCC+TGG | - | chr3_4:75252164-75252183 | Msa0522190:intron | 45.0% |
| ! | CAGAATACAGCTGGTTTCCT+GGG | - | chr3_4:75252165-75252184 | Msa0522190:intron | 45.0% |
| CATGTAGAACCCAAATGGGA+TGG | - | chr3_4:75252417-75252436 | Msa0522190:CDS | 45.0% | |
| !!! | AGGCCTCAGTTTTTTGTTGG+TGG | + | chr3_4:75252453-75252472 | None:intergenic | 45.0% |
| ! | CTGAGGCCTGATTCATTTTG+GGG | - | chr3_4:75252464-75252483 | Msa0522190:intron | 45.0% |
| !! | ATAGTGGCCTTGTAGTTACG+AGG | - | chr3_4:75252550-75252569 | Msa0522190:intron | 45.0% |
| TGCTCATATAGCAACGTGCA+TGG | - | chr3_4:75252663-75252682 | Msa0522190:CDS | 45.0% | |
| !! | AAGATAAAAAATTATTAAAA+AGG | + | chr3_4:75249736-75249755 | None:intergenic | 5.0% |
| !!! | GTGTCAAGTTTTGGACTCGG+CGG | + | chr3_4:75248808-75248827 | None:intergenic | 50.0% |
| TGAGATTGAGGAGGGACTTG+AGG | - | chr3_4:75248939-75248958 | Msa0522190:three_prime_UTR | 50.0% | |
| GAGATTGAGGAGGGACTTGA+GGG | - | chr3_4:75248940-75248959 | Msa0522190:three_prime_UTR | 50.0% | |
| CAGTTCCTCTACGAAGTCGA+AGG | - | chr3_4:75248994-75249013 | Msa0522190:three_prime_UTR | 50.0% | |
| CTTCTCCTTCGACTTCGTAG+AGG | + | chr3_4:75249002-75249021 | None:intergenic | 50.0% | |
| GCGCCATAGAACTGCTTTCT+TGG | - | chr3_4:75249373-75249392 | Msa0522190:intron | 50.0% | |
| CAGGAGTTGTACTCTTTCCC+GGG | - | chr3_4:75249792-75249811 | Msa0522190:CDS | 50.0% | |
| AGGAGTTGTACTCTTTCCCG+GGG | - | chr3_4:75249793-75249812 | Msa0522190:CDS | 50.0% | |
| ACGGGGAACAGTAACCCTAA+GGG | + | chr3_4:75249828-75249847 | None:intergenic | 50.0% | |
| AACGGGGAACAGTAACCCTA+AGG | + | chr3_4:75249829-75249848 | None:intergenic | 50.0% | |
| ! | GGTTACTGTTCCCCGTTTTG+TGG | - | chr3_4:75249832-75249851 | Msa0522190:CDS | 50.0% |
| CGTTCCTTACACCATTGGTG+TGG | - | chr3_4:75249886-75249905 | Msa0522190:CDS | 50.0% | |
| CCTACCACACCAATGGTGTA+AGG | + | chr3_4:75249893-75249912 | None:intergenic | 50.0% | |
| CCTTACACCATTGGTGTGGT+AGG | - | chr3_4:75249890-75249909 | Msa0522190:CDS | 50.0% | |
| CAGTCAACTGCTGTGGTGTA+AGG | + | chr3_4:75249927-75249946 | None:intergenic | 50.0% | |
| GCACATCCATGACACCATGA+TGG | + | chr3_4:75249980-75249999 | None:intergenic | 50.0% | |
| !! | CATTTCAGGTTCGGGTTCAC+AGG | - | chr3_4:75250005-75250024 | Msa0522190:intron | 50.0% |
| TCACTGAATGTGGTTACCCG+TGG | - | chr3_4:75250578-75250597 | Msa0522190:CDS | 50.0% | |
| !! | GGCCGTTCTTCTTAGCCTTA+TGG | - | chr3_4:75250752-75250771 | Msa0522190:CDS | 50.0% |
| !!! | AGAACTCCAAGGGGCGTTTT+TGG | - | chr3_4:75250809-75250828 | Msa0522190:CDS | 50.0% |
| GATTTGCCAAAAACGCCCCT+TGG | + | chr3_4:75250818-75250837 | None:intergenic | 50.0% | |
| GTGAGCTTTCACCAACGGAA+AGG | - | chr3_4:75250936-75250955 | Msa0522190:intron | 50.0% | |
| GGAACCAGTGGCTGATAGAT+AGG | + | chr3_4:75250966-75250985 | None:intergenic | 50.0% | |
| GATGTATCAGCGAACAGCAG+CGG | - | chr3_4:75251007-75251026 | Msa0522190:CDS | 50.0% | |
| GGATGACTGCTTTCCAGAAG+TGG | + | chr3_4:75251101-75251120 | None:intergenic | 50.0% | |
| !! | AAAAGCATTCTGGCCCCACT+GGG | - | chr3_4:75251171-75251190 | Msa0522190:intron | 50.0% |
| CGTACATGCGATAAACCCAG+TGG | + | chr3_4:75251189-75251208 | None:intergenic | 50.0% | |
| TGCCCTTTGTGCAAGCCAAT+AGG | + | chr3_4:75251215-75251234 | None:intergenic | 50.0% | |
| GCATCACATATAGGTTGCGC+AGG | - | chr3_4:75251864-75251883 | Msa0522190:intron | 50.0% | |
| GTGCAAAATTGTGGGGGCTT+TGG | + | chr3_4:75251956-75251975 | None:intergenic | 50.0% | |
| GGATTCACATAGGCACCAAG+AGG | + | chr3_4:75252074-75252093 | None:intergenic | 50.0% | |
| !! | CTTGGTGCCTATGTGAATCC+TGG | - | chr3_4:75252074-75252093 | Msa0522190:intron | 50.0% |
| ATCTCGTGGACATAACCACC+AGG | + | chr3_4:75252095-75252114 | None:intergenic | 50.0% | |
| GCCAATGGCTTATCTCTCGT+TGG | - | chr3_4:75252131-75252150 | Msa0522190:intron | 50.0% | |
| CCCAACGAGAGATAAGCCAT+TGG | + | chr3_4:75252135-75252154 | None:intergenic | 50.0% | |
| CGGGGAACAGTAACCCTAAG+GGG | + | chr3_4:75249827-75249846 | None:intergenic | 55.0% | |
| !! | AAGCACTGGGACAACTGCTG+TGG | - | chr3_4:75250057-75250076 | Msa0522190:intron | 55.0% |
| ATGCAGTCAACCGCGTCTAG+TGG | - | chr3_4:75250305-75250324 | Msa0522190:intron | 55.0% | |
| TGCAGTCAACCGCGTCTAGT+GGG | - | chr3_4:75250306-75250325 | Msa0522190:intron | 55.0% | |
| CGGTCTTGGAACGACGTTGA+CGG | - | chr3_4:75250623-75250642 | Msa0522190:CDS | 55.0% | |
| TTGGAACGACGTTGACGGAG+TGG | - | chr3_4:75250628-75250647 | Msa0522190:CDS | 55.0% | |
| ACGCCCCTTGGAGTTCTCAA+TGG | + | chr3_4:75250806-75250825 | None:intergenic | 55.0% | |
| !! | CAAAAGCATTCTGGCCCCAC+TGG | - | chr3_4:75251170-75251189 | Msa0522190:intron | 55.0% |
| GGTGCCTATGTGAATCCTGG+TGG | - | chr3_4:75252077-75252096 | Msa0522190:intron | 55.0% | |
| !! | TGAGGGTGCCCCCGAAATAG+AGG | - | chr3_4:75248957-75248976 | Msa0522190:three_prime_UTR | 60.0% |
| !! | GAGGGTGCCCCCGAAATAGA+GGG | - | chr3_4:75248958-75248977 | Msa0522190:three_prime_UTR | 60.0% |
| CTAAGGGGAAGAGTAGCCCC+GGG | + | chr3_4:75249812-75249831 | None:intergenic | 60.0% | |
| CCTAAGGGGAAGAGTAGCCC+CGG | + | chr3_4:75249813-75249832 | None:intergenic | 60.0% | |
| CGGGGCTACTCTTCCCCTTA+GGG | - | chr3_4:75249811-75249830 | Msa0522190:CDS | 60.0% | |
| ACGATGCAAGCGGCAAGCAC+TGG | - | chr3_4:75250043-75250062 | Msa0522190:intron | 60.0% | |
| CGATGCAAGCGGCAAGCACT+GGG | - | chr3_4:75250044-75250063 | Msa0522190:intron | 60.0% | |
| TCGACAGTATGGGCGCCTAG+AGG | - | chr3_4:75250550-75250569 | Msa0522190:CDS | 60.0% | |
| CAGTATGGGCGCCTAGAGGA+TGG | - | chr3_4:75250554-75250573 | Msa0522190:CDS | 60.0% | |
| CTGCACGGCTAAAGCACGAG+TGG | + | chr3_4:75250695-75250714 | None:intergenic | 60.0% | |
| !! | CACTGGTTCCGGTTCTGCGT+CGG | - | chr3_4:75250976-75250995 | Msa0522190:intron | 60.0% |
| ! | ACTGGTTCCGGTTCTGCGTC+GGG | - | chr3_4:75250977-75250996 | Msa0522190:intron | 60.0% |
| TTCCGGTTCTGCGTCGGGTA+TGG | - | chr3_4:75250982-75251001 | Msa0522190:intron | 60.0% | |
| ! | TGGCTTGCACAAAGGGCAGC+AGG | - | chr3_4:75251217-75251236 | Msa0522190:intron | 60.0% |
| CCGGGGCTACTCTTCCCCTT+AGG | - | chr3_4:75249810-75249829 | Msa0522190:CDS | 65.0% | |
| CGACGCAGAACCGGAACCAG+TGG | + | chr3_4:75250978-75250997 | None:intergenic | 65.0% | |
| CGCCATACCCGACGCAGAAC+CGG | + | chr3_4:75250987-75251006 | None:intergenic | 65.0% | |
| CGGTTCTGCGTCGGGTATGG+CGG | - | chr3_4:75250985-75251004 | Msa0522190:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 75248797 | 75252853 | 75248797 | ID=Msa0522190;Name=Msa0522190 |
| chr3_4 | mRNA | 75248797 | 75252853 | 75248797 | ID=Msa0522190-mRNA-1;Parent=Msa0522190;Name=Msa0522190-mRNA-1;_AED=0.09;_eAED=0.09;_QI=125|1|1|1|1|1|10|321|531 |
| chr3_4 | exon | 75248797 | 75249262 | 75248797 | ID=Msa0522190-mRNA-1:exon:21502;Parent=Msa0522190-mRNA-1 |
| chr3_4 | exon | 75249464 | 75249627 | 75249464 | ID=Msa0522190-mRNA-1:exon:21501;Parent=Msa0522190-mRNA-1 |
| chr3_4 | exon | 75249713 | 75249918 | 75249713 | ID=Msa0522190-mRNA-1:exon:21500;Parent=Msa0522190-mRNA-1 |
| chr3_4 | exon | 75250412 | 75250883 | 75250412 | ID=Msa0522190-mRNA-1:exon:21499;Parent=Msa0522190-mRNA-1 |
| chr3_4 | exon | 75251001 | 75251102 | 75251001 | ID=Msa0522190-mRNA-1:exon:21498;Parent=Msa0522190-mRNA-1 |
| chr3_4 | exon | 75251572 | 75251637 | 75251572 | ID=Msa0522190-mRNA-1:exon:21497;Parent=Msa0522190-mRNA-1 |
| chr3_4 | exon | 75251743 | 75251855 | 75251743 | ID=Msa0522190-mRNA-1:exon:21496;Parent=Msa0522190-mRNA-1 |
| chr3_4 | exon | 75252213 | 75252290 | 75252213 | ID=Msa0522190-mRNA-1:exon:21495;Parent=Msa0522190-mRNA-1 |
| chr3_4 | exon | 75252387 | 75252466 | 75252387 | ID=Msa0522190-mRNA-1:exon:21494;Parent=Msa0522190-mRNA-1 |
| chr3_4 | exon | 75252559 | 75252853 | 75252559 | ID=Msa0522190-mRNA-1:exon:21493;Parent=Msa0522190-mRNA-1 |
| chr3_4 | five_prime_UTR | 75252729 | 75252853 | 75252729 | ID=Msa0522190-mRNA-1:five_prime_utr;Parent=Msa0522190-mRNA-1 |
| chr3_4 | CDS | 75252559 | 75252728 | 75252559 | ID=Msa0522190-mRNA-1:cds;Parent=Msa0522190-mRNA-1 |
| chr3_4 | CDS | 75252387 | 75252466 | 75252387 | ID=Msa0522190-mRNA-1:cds;Parent=Msa0522190-mRNA-1 |
| chr3_4 | CDS | 75252213 | 75252290 | 75252213 | ID=Msa0522190-mRNA-1:cds;Parent=Msa0522190-mRNA-1 |
| chr3_4 | CDS | 75251743 | 75251855 | 75251743 | ID=Msa0522190-mRNA-1:cds;Parent=Msa0522190-mRNA-1 |
| chr3_4 | CDS | 75251572 | 75251637 | 75251572 | ID=Msa0522190-mRNA-1:cds;Parent=Msa0522190-mRNA-1 |
| chr3_4 | CDS | 75251001 | 75251102 | 75251001 | ID=Msa0522190-mRNA-1:cds;Parent=Msa0522190-mRNA-1 |
| chr3_4 | CDS | 75250412 | 75250883 | 75250412 | ID=Msa0522190-mRNA-1:cds;Parent=Msa0522190-mRNA-1 |
| chr3_4 | CDS | 75249713 | 75249918 | 75249713 | ID=Msa0522190-mRNA-1:cds;Parent=Msa0522190-mRNA-1 |
| chr3_4 | CDS | 75249464 | 75249627 | 75249464 | ID=Msa0522190-mRNA-1:cds;Parent=Msa0522190-mRNA-1 |
| chr3_4 | CDS | 75249118 | 75249262 | 75249118 | ID=Msa0522190-mRNA-1:cds;Parent=Msa0522190-mRNA-1 |
| chr3_4 | three_prime_UTR | 75248797 | 75249117 | 75248797 | ID=Msa0522190-mRNA-1:three_prime_utr;Parent=Msa0522190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
