AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0545180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0545180 MtrunA17_Chr4g0025811 78.144 668 110 3 1 636 354 1017 0.0 1007
Msa0545180 MtrunA17_Chr4g0025831 77.156 661 105 4 1 625 354 1004 0.0 994
Msa0545180 MtrunA17_Chr4g0025751 74.551 668 93 6 1 636 354 976 0.0 945
Msa0545180 MtrunA17_Chr4g0025771 82.609 483 83 1 155 636 1 483 0.0 794
Msa0545180 MtrunA17_Chr4g0025741 79.493 473 64 1 1 440 354 826 0.0 734
Msa0545180 MtrunA17_Chr6g0479631 58.150 681 223 12 6 636 359 1027 0.0 722
Msa0545180 MtrunA17_Chr6g0484161 58.507 670 228 10 6 628 383 1049 0.0 692
Msa0545180 MtrunA17_Chr1g0146421 58.084 668 225 11 6 629 359 1015 0.0 690
Msa0545180 MtrunA17_Chr6g0481141 54.398 739 233 12 6 653 410 1135 0.0 682
Msa0545180 MtrunA17_Chr6g0480521 56.839 658 225 9 6 623 360 998 0.0 672
Msa0545180 MtrunA17_Chr6g0479841 55.192 703 234 10 1 631 12 705 0.0 654
Msa0545180 MtrunA17_Chr6g0479671 52.869 732 241 13 6 649 359 1074 0.0 649
Msa0545180 MtrunA17_Chr6g0481251 57.440 672 219 11 6 623 216 874 0.0 648
Msa0545180 MtrunA17_Chr6g0480321 57.562 681 219 13 6 636 217 877 0.0 645
Msa0545180 MtrunA17_Chr6g0479591 55.758 660 192 13 8 623 387 990 0.0 643
Msa0545180 MtrunA17_Chr6g0480451 54.436 665 246 10 6 631 424 1070 0.0 642
Msa0545180 MtrunA17_Chr2g0300251 55.237 697 228 11 11 636 366 1049 0.0 642
Msa0545180 MtrunA17_Chr6g0480041 53.813 695 234 10 4 625 357 1037 0.0 631
Msa0545180 MtrunA17_Chr6g0479641 56.535 681 235 11 6 636 360 1029 0.0 624
Msa0545180 MtrunA17_Chr6g0479621 55.733 689 237 11 6 633 361 1042 0.0 624
Msa0545180 MtrunA17_Chr6g0480421 56.000 675 229 11 6 636 217 867 0.0 624
Msa0545180 MtrunA17_Chr6g0480311 55.099 657 232 11 1 606 342 986 0.0 620
Msa0545180 MtrunA17_Chr8g0368251 54.273 667 238 13 6 623 359 1007 0.0 619
Msa0545180 MtrunA17_Chr6g0478451 53.043 690 234 12 1 623 357 1023 0.0 606
Msa0545180 MtrunA17_Chr6g0479001 51.263 673 251 15 6 622 349 1000 0.0 596
Msa0545180 MtrunA17_Chr6g0479701 52.746 692 211 12 1 633 360 994 0.0 590
Msa0545180 MtrunA17_Chr6g0479051 49.070 699 234 12 6 607 328 1001 0.0 565
Msa0545180 MtrunA17_Chr6g0478771 58.302 530 176 7 6 493 349 875 0.0 563
Msa0545180 MtrunA17_Chr6g0478841 51.163 688 260 14 6 642 349 1011 0.0 562
Msa0545180 MtrunA17_Chr6g0479821 49.698 662 229 12 1 615 357 961 0.0 555
Msa0545180 MtrunA17_Chr6g0479761 63.147 483 132 5 6 443 216 697 0.0 551
Msa0545180 MtrunA17_Chr6g0479651 47.626 716 268 18 6 637 363 1055 3.66e-171 523
Msa0545180 MtrunA17_Chr6g0480051 46.515 703 280 17 4 637 138 813 1.61e-169 511
Msa0545180 MtrunA17_Chr6g0481011 44.006 709 284 12 6 625 366 1050 1.35e-165 508
Msa0545180 MtrunA17_Chr6g0480911 44.643 728 268 17 1 623 356 1053 1.12e-163 502
Msa0545180 MtrunA17_Chr4g0006771 48.814 590 233 7 6 528 365 952 2.19e-163 499
Msa0545180 MtrunA17_Chr6g0482511 42.170 728 291 15 1 622 369 1072 9.57e-154 476
Msa0545180 MtrunA17_Chr4g0025691 77.532 316 57 5 324 636 1 305 9.46e-153 450
Msa0545180 MtrunA17_Chr6g0451551 42.960 696 295 15 6 624 502 1172 3.57e-151 472
Msa0545180 MtrunA17_Chr6g0480401 63.802 384 132 3 115 493 1 382 3.65e-151 447
Msa0545180 MtrunA17_Chr6g0480271 62.814 398 107 2 6 362 360 757 3.63e-149 455
Msa0545180 MtrunA17_Chr6g0480461 59.729 442 139 5 6 410 410 849 9.68e-149 460
Msa0545180 MtrunA17_Chr6g0478741 53.036 494 167 7 6 457 349 819 1.05e-144 446
Msa0545180 MtrunA17_Chr4g0025701 79.783 277 24 1 1 245 354 630 3.90e-141 431
Msa0545180 MtrunA17_Chr6g0479731 63.934 366 100 2 6 339 357 722 1.11e-138 427
Msa0545180 MtrunA17_Chr8g0371711 40.813 713 294 19 6 622 359 1039 2.68e-137 432
Msa0545180 MtrunA17_Chr6g0480151 48.045 537 149 7 6 508 359 799 7.22e-135 420
Msa0545180 MtrunA17_Chr8g0353371 35.279 771 324 13 1 622 363 1107 4.77e-132 420
Msa0545180 MtrunA17_Chr6g0480361 49.904 523 187 11 115 631 1 454 1.20e-127 389
Msa0545180 MtrunA17_Chr6g0481001 39.137 672 292 18 6 625 363 969 2.72e-124 397
Msa0545180 MtrunA17_Chr6g0480181 57.880 368 118 4 6 339 352 716 2.93e-124 392
Msa0545180 MtrunA17_Chr8g0354701 35.995 764 325 15 1 622 348 1089 1.54e-123 404
Msa0545180 MtrunA17_Chr8g0350801 37.330 734 305 17 11 624 381 1079 5.27e-122 393
Msa0545180 MtrunA17_Chr6g0481231 53.162 427 168 9 218 627 3 414 1.85e-120 370
Msa0545180 MtrunA17_Chr8g0354721 35.509 766 322 14 6 624 352 1092 9.28e-117 386
Msa0545180 MtrunA17_Chr6g0480981 42.572 552 240 12 124 622 247 774 2.97e-116 370
Msa0545180 MtrunA17_Chr8g0354711 34.943 787 340 20 1 641 343 1103 2.27e-113 376
Msa0545180 MtrunA17_Chr8g0354681 34.315 679 299 12 1 537 352 1025 5.04e-109 357
Msa0545180 MtrunA17_Chr3g0081531 33.962 742 368 20 1 651 343 1053 4.94e-108 360
Msa0545180 MtrunA17_Chr6g0481191 51.282 390 153 6 6 391 49 405 7.25e-107 333
Msa0545180 MtrunA17_Chr2g0299811 45.013 391 162 5 1 339 198 587 2.46e-93 311
Msa0545180 MtrunA17_Chr1g0153511 46.348 397 152 7 1 339 306 699 3.34e-93 319
Msa0545180 MtrunA17_Chr1g0153511 31.734 271 146 7 180 414 1144 1411 6.79e-21 99.0
Msa0545180 MtrunA17_Chr3g0084151 30.587 716 391 15 8 635 352 1049 3.33e-90 306
Msa0545180 MtrunA17_Chr2g0299921 44.757 391 163 5 1 339 349 738 8.47e-90 310
Msa0545180 MtrunA17_Chr5g0415831 43.779 434 186 10 226 622 1 413 9.71e-90 289
Msa0545180 MtrunA17_Chr6g0482111 31.356 708 368 16 6 622 357 1037 2.00e-89 308
Msa0545180 MtrunA17_Chr2g0299851 44.501 391 164 5 1 339 350 739 2.04e-89 308
Msa0545180 MtrunA17_Chr3g0084731 44.501 391 164 6 1 339 353 742 2.60e-89 303
Msa0545180 MtrunA17_Chr2g0299841 43.223 391 169 5 1 339 392 781 1.59e-88 302
Msa0545180 MtrunA17_Chr2g0299881 43.478 391 168 5 1 339 355 744 2.79e-88 305
Msa0545180 MtrunA17_Chr3g0084721 44.757 391 163 6 1 339 355 744 4.52e-88 300
Msa0545180 MtrunA17_Chr6g0479741 53.793 290 125 6 349 633 23 308 2.28e-82 266
Msa0545180 MtrunA17_Chr3g0084841 42.199 391 173 6 1 339 356 745 1.83e-81 282
Msa0545180 MtrunA17_Chr6g0482441 45.455 352 145 6 6 313 345 693 7.67e-81 283
Msa0545180 MtrunA17_Chr6g0482441 32.340 470 256 16 174 622 846 1274 3.55e-42 166
Msa0545180 MtrunA17_Chr6g0482141 43.421 380 154 5 8 329 392 768 8.50e-81 282
Msa0545180 MtrunA17_Chr6g0482141 34.086 487 258 16 162 622 744 1193 1.95e-52 198
Msa0545180 MtrunA17_Chr3g0084851 40.876 411 185 7 1 354 355 764 1.14e-80 280
Msa0545180 MtrunA17_Chr2g0299791 42.967 391 170 5 1 339 351 740 3.72e-80 281
Msa0545180 MtrunA17_Chr8g0379351 38.333 480 232 11 115 544 40 505 6.97e-80 266
Msa0545180 MtrunA17_Chr6g0482491 43.814 388 137 8 1 310 337 721 2.84e-79 278
Msa0545180 MtrunA17_Chr6g0482491 31.723 476 243 17 194 624 840 1278 2.93e-44 173
Msa0545180 MtrunA17_Chr4g0010521 29.922 645 344 13 8 548 352 992 3.29e-79 278
Msa0545180 MtrunA17_Chr5g0442761 29.741 733 383 17 1 622 352 1063 3.89e-78 276
Msa0545180 MtrunA17_Chr3g0077971 44.505 364 141 6 8 313 380 740 2.66e-77 273
Msa0545180 MtrunA17_Chr3g0077971 34.261 467 257 16 177 622 1120 1557 1.55e-46 180
Msa0545180 MtrunA17_Chr1g0172541 45.402 348 142 6 6 309 345 688 7.55e-77 270
Msa0545180 MtrunA17_Chr1g0172541 32.886 447 243 14 200 622 720 1133 9.29e-43 168
Msa0545180 MtrunA17_Chr6g0482321 44.970 338 139 7 15 313 389 718 1.59e-74 263
Msa0545180 MtrunA17_Chr6g0482321 27.811 507 253 23 158 622 709 1144 9.24e-27 117
Msa0545180 MtrunA17_Chr4g0010651 29.703 606 337 10 6 527 352 952 1.01e-73 262
Msa0545180 MtrunA17_Chr2g0281531 47.788 339 143 5 115 419 44 382 2.22e-73 244
Msa0545180 MtrunA17_Chr6g0481331 42.234 367 156 4 3 313 400 766 3.00e-71 254
Msa0545180 MtrunA17_Chr1g0181021 47.910 311 118 9 349 630 15 310 2.53e-70 233
Msa0545180 MtrunA17_Chr6g0474801 37.383 428 165 7 1 325 355 782 1.43e-68 242
Msa0545180 MtrunA17_Chr6g0482351 41.176 374 167 6 6 330 384 753 2.57e-67 243
Msa0545180 MtrunA17_Chr6g0482351 33.060 487 242 17 176 622 1035 1477 4.01e-51 194
Msa0545180 MtrunA17_Chr5g0417081 44.706 255 108 3 1 223 136 389 2.81e-61 213
Msa0545180 MtrunA17_Chr5g0417041 41.489 282 128 4 1 246 13 293 1.13e-60 207
Msa0545180 MtrunA17_Chr6g0454851 35.128 390 197 7 1 335 437 825 4.57e-58 215
Msa0545180 MtrunA17_Chr6g0455211 34.615 390 199 6 1 335 389 777 5.33e-58 214
Msa0545180 MtrunA17_Chr6g0455191 34.518 394 202 6 1 339 653 1045 1.05e-57 214
Msa0545180 MtrunA17_Chr4g0005891 35.038 391 198 6 1 336 385 774 3.46e-57 212
Msa0545180 MtrunA17_Chr4g0005591 34.190 389 201 5 1 335 414 801 1.46e-56 210
Msa0545180 MtrunA17_Chr6g0454971 34.615 390 199 6 1 335 385 773 4.08e-56 209
Msa0545180 MtrunA17_Chr6g0454951 33.846 390 202 6 1 335 431 819 1.33e-55 207
Msa0545180 MtrunA17_Chr6g0474761 45.020 251 102 4 1 215 355 605 1.34e-55 202
Msa0545180 MtrunA17_Chr6g0481221 56.383 188 43 3 6 155 359 545 4.79e-55 199
Msa0545180 MtrunA17_Chr6g0482161 47.137 227 85 3 6 197 354 580 2.95e-54 197
Msa0545180 MtrunA17_Chr4g0005871 34.359 390 200 6 1 335 470 858 2.95e-54 203
Msa0545180 MtrunA17_Chr4g0005851 33.504 391 204 6 1 336 374 763 8.59e-54 202
Msa0545180 MtrunA17_Chr6g0454831 34.872 390 197 7 1 335 345 732 8.60e-54 202
Msa0545180 MtrunA17_Chr4g0014831 32.481 391 208 7 1 336 130 519 1.30e-53 197
Msa0545180 MtrunA17_Chr3g0119601 35.696 381 184 6 1 327 347 720 6.31e-53 199
Msa0545180 MtrunA17_Chr6g0454961 34.015 391 202 6 1 336 371 760 7.27e-53 199
Msa0545180 MtrunA17_Chr7g0257531 34.897 341 168 5 1 288 4 343 8.41e-53 195
Msa0545180 MtrunA17_Chr6g0455221 33.077 390 205 7 1 335 350 738 1.69e-52 198
Msa0545180 MtrunA17_Chr6g0454821 32.564 390 207 6 1 335 385 773 1.73e-52 198
Msa0545180 MtrunA17_Chr7g0248521 30.435 506 267 10 6 454 356 833 1.34e-51 195
Msa0545180 MtrunA17_Chr8g0352211 34.359 390 200 6 1 335 357 745 6.91e-51 194
Msa0545180 MtrunA17_Chr7g0248121 33.503 394 205 5 1 339 352 743 4.28e-50 191
Msa0545180 MtrunA17_Chr8g0348541 33.162 389 197 5 6 336 362 745 4.49e-50 191
Msa0545180 MtrunA17_Chr6g0472561 37.644 348 155 10 316 625 1 324 5.32e-50 180
Msa0545180 MtrunA17_Chr6g0454931 36.070 341 164 6 1 288 412 751 7.28e-50 188
Msa0545180 MtrunA17_Chr6g0455131 34.447 389 199 6 1 334 429 816 1.06e-49 189
Msa0545180 MtrunA17_Chr7g0256881 31.102 508 264 14 6 455 349 828 2.38e-49 189
Msa0545180 MtrunA17_Chr6g0480921 34.000 400 144 6 115 459 46 380 2.62e-49 179
Msa0545180 MtrunA17_Chr6g0455251 33.162 389 207 5 1 337 360 747 5.32e-49 187
Msa0545180 MtrunA17_Chr6g0455251 36.686 169 99 4 172 335 697 862 2.12e-15 80.9
Msa0545180 MtrunA17_Chr6g0455031 33.247 388 205 6 1 335 364 750 6.58e-49 187
Msa0545180 MtrunA17_Chr4g0009141 32.487 394 210 6 1 339 862 1254 2.22e-48 186
Msa0545180 MtrunA17_Chr4g0009141 36.458 96 58 2 6 98 368 463 5.56e-11 66.6
Msa0545180 MtrunA17_Chr8g0338901 32.817 387 202 9 6 336 371 755 2.90e-48 185
Msa0545180 MtrunA17_Chr8g0338981 33.592 387 199 9 6 336 348 732 1.99e-47 182
Msa0545180 MtrunA17_Chr6g0455551 32.225 391 208 8 1 336 421 809 3.86e-47 181
Msa0545180 MtrunA17_Chr8g0339011 33.075 387 201 9 6 336 344 728 2.23e-46 179
Msa0545180 MtrunA17_Chr7g0248511 32.905 389 204 5 6 339 363 749 3.04e-46 179
Msa0545180 MtrunA17_Chr7g0248511 25.839 298 189 10 200 481 704 985 1.88e-11 68.2
Msa0545180 MtrunA17_Chr5g0414761 33.943 383 197 6 9 336 139 520 3.12e-46 178
Msa0545180 MtrunA17_Chr8g0352221 32.207 444 219 11 1 376 339 768 3.22e-46 179
Msa0545180 MtrunA17_Chr3g0085731 31.807 393 208 7 1 336 359 748 7.79e-46 177
Msa0545180 MtrunA17_Chr6g0482461 33.258 442 228 16 212 622 271 676 8.20e-46 175
Msa0545180 MtrunA17_Chr4g0009401 28.333 540 311 14 1 468 838 1373 1.06e-45 177
Msa0545180 MtrunA17_Chr4g0009401 38.095 105 65 0 6 110 345 449 1.14e-13 75.5
Msa0545180 MtrunA17_Chr4g0009101 32.481 391 208 7 1 336 880 1269 2.73e-45 176
Msa0545180 MtrunA17_Chr4g0009101 39.175 97 57 1 6 100 382 478 3.59e-15 80.5
Msa0545180 MtrunA17_Chr6g0482471 43.568 241 94 4 6 207 384 621 3.23e-45 175
Msa0545180 MtrunA17_Chr6g0482471 38.095 294 140 9 46 310 632 912 8.89e-39 155
Msa0545180 MtrunA17_Chr8g0339031 27.397 584 317 15 1 497 355 918 5.48e-45 175
Msa0545180 MtrunA17_Chr3g0085541 31.737 334 174 5 1 281 358 690 1.40e-44 171
Msa0545180 MtrunA17_Chr4g0009041 32.487 394 202 9 1 336 850 1237 1.84e-44 174
Msa0545180 MtrunA17_Chr4g0009171 32.698 367 189 7 1 312 342 705 4.23e-44 172
Msa0545180 MtrunA17_Chr4g0009171 31.139 395 213 8 1 339 1068 1459 5.72e-44 172
Msa0545180 MtrunA17_Chr8g0342911 31.514 403 208 8 1 339 363 761 5.13e-44 172
Msa0545180 MtrunA17_Chr2g0298531 27.687 549 286 13 1 460 351 877 5.48e-44 172
Msa0545180 MtrunA17_Chr4g0009301 31.472 394 212 7 1 339 882 1272 6.44e-44 172
Msa0545180 MtrunA17_Chr8g0338881 32.737 391 207 6 1 336 374 763 1.36e-43 171
Msa0545180 MtrunA17_Chr4g0025731 78.022 91 20 0 546 636 1 91 1.49e-43 154
Msa0545180 MtrunA17_Chr4g0010711 31.010 416 221 9 1 352 855 1268 4.30e-43 169
Msa0545180 MtrunA17_Chr4g0010711 35.714 112 72 0 1 112 355 466 8.35e-14 75.9
Msa0545180 MtrunA17_Chr4g0009241 30.982 397 215 8 1 339 884 1279 5.40e-43 169
Msa0545180 MtrunA17_Chr2g0298291 27.869 549 285 14 1 460 346 872 6.72e-43 168
Msa0545180 MtrunA17_Chr8g0370511 29.070 430 245 7 1 371 345 773 7.09e-43 168
Msa0545180 MtrunA17_Chr6g0479611 50.711 211 73 8 442 636 2 197 1.70e-42 154
Msa0545180 MtrunA17_Chr5g0417071 34.226 336 162 11 1 295 95 412 1.54e-41 160
Msa0545180 MtrunA17_Chr5g0417071 31.507 292 161 11 347 626 283 547 2.86e-25 111
Msa0545180 MtrunA17_Chr8g0372681 31.300 377 199 5 1 318 349 724 4.54e-41 162
Msa0545180 MtrunA17_Chr5g0420331 29.471 397 212 7 1 336 346 735 4.54e-41 162
Msa0545180 MtrunA17_Chr7g0223531 29.949 394 220 7 1 339 355 747 5.74e-41 162
Msa0545180 MtrunA17_Chr5g0420341 29.471 397 212 7 1 336 346 735 1.52e-40 161
Msa0545180 MtrunA17_Chr6g0480381 78.218 101 19 1 1 101 361 458 3.24e-40 154
Msa0545180 MtrunA17_Chr8g0339021 29.199 387 222 6 1 336 339 724 4.13e-40 159
Msa0545180 MtrunA17_Chr4g0041611 27.458 590 307 16 6 493 359 929 4.58e-40 159
Msa0545180 MtrunA17_Chr8g0351551 31.421 366 191 5 1 307 350 714 6.36e-40 159
Msa0545180 MtrunA17_Chr2g0330121 30.348 402 213 6 1 339 167 564 6.40e-40 159
Msa0545180 MtrunA17_Chr4g0020591 28.788 528 287 11 6 448 354 877 7.59e-40 159
Msa0545180 MtrunA17_Chr4g0018431 28.125 544 291 15 6 460 357 889 9.60e-40 158
Msa0545180 MtrunA17_Chr8g0353001 30.435 368 196 5 1 309 350 716 1.10e-39 158
Msa0545180 MtrunA17_Chr5g0417051 37.324 284 144 6 243 495 1 281 3.40e-39 146
Msa0545180 MtrunA17_Chr8g0342131 30.458 371 192 6 1 309 354 720 4.99e-39 155
Msa0545180 MtrunA17_Chr3g0118981 27.966 590 309 19 1 491 354 926 1.30e-38 155
Msa0545180 MtrunA17_Chr3g0102271 26.471 578 326 15 1 493 353 916 1.99e-38 154
Msa0545180 MtrunA17_Chr8g0363851 30.318 409 207 9 4 336 171 577 2.18e-38 154
Msa0545180 MtrunA17_Chr7g0242751 30.997 371 193 7 1 312 381 747 2.57e-38 153
Msa0545180 MtrunA17_Chr3g0102121 29.480 519 283 11 6 448 357 868 3.26e-38 154
Msa0545180 MtrunA17_Chr3g0102171 27.955 533 297 14 6 460 357 880 3.69e-38 153
Msa0545180 MtrunA17_Chr7g0242801 30.769 364 193 5 6 312 431 792 3.86e-38 154
Msa0545180 MtrunA17_Chr4g0005401 29.095 409 206 8 6 336 361 763 5.78e-38 153
Msa0545180 MtrunA17_Chr3g0102281 27.599 529 294 12 6 455 357 875 6.69e-38 152
Msa0545180 MtrunA17_Chr4g0041431 30.081 369 203 5 1 315 172 539 1.68e-37 151
Msa0545180 MtrunA17_Chr7g0255681 29.412 391 220 6 1 335 1352 1742 1.70e-37 152
Msa0545180 MtrunA17_Chr7g0255681 35.200 125 78 3 1 123 349 472 1.65e-11 68.6
Msa0545180 MtrunA17_Chr3g0102131 29.167 528 292 12 1 452 352 873 1.73e-37 151
Msa0545180 MtrunA17_Chr4g0005291 29.880 415 218 10 6 352 406 815 1.77e-37 151
Msa0545180 MtrunA17_Chr4g0041441 25.263 570 326 13 6 491 344 897 3.59e-37 150
Msa0545180 MtrunA17_Chr7g0242811 32.055 365 187 7 1 307 378 739 5.93e-37 150
Msa0545180 MtrunA17_Chr6g0486361 31.180 356 185 7 20 321 375 724 1.02e-35 145
Msa0545180 MtrunA17_Chr2g0319851 27.778 486 270 9 6 423 393 865 2.15e-35 145
Msa0545180 MtrunA17_Chr4g0042011 29.805 359 197 5 1 305 358 715 5.57e-35 143
Msa0545180 MtrunA17_Chr6g0486521 28.136 590 301 22 1 493 355 918 8.70e-35 143
Msa0545180 MtrunA17_Chr3g0102261 28.137 526 292 13 1 448 352 869 1.21e-34 142
Msa0545180 MtrunA17_Chr4g0005331 30.861 418 201 13 6 343 420 829 1.67e-34 142
Msa0545180 MtrunA17_Chr4g0041241 30.811 370 198 8 6 320 361 727 2.73e-34 141
Msa0545180 MtrunA17_Chr4g0041231 28.073 545 318 17 6 492 361 889 4.16e-34 140
Msa0545180 MtrunA17_Chr6g0454901 34.694 245 125 5 6 216 161 404 5.86e-34 135
Msa0545180 MtrunA17_Chr6g0485991 30.469 384 194 10 5 321 350 727 5.92e-34 140
Msa0545180 MtrunA17_Chr3g0119001 27.094 561 310 13 1 480 354 896 6.92e-34 140
Msa0545180 MtrunA17_Chr4g0005391 26.719 509 251 14 6 448 396 848 3.75e-33 137
Msa0545180 MtrunA17_Chr8g0342201 29.430 316 158 5 1 255 387 698 3.77e-33 136
Msa0545180 MtrunA17_Chr6g0486481 27.321 560 310 17 1 491 355 886 1.95e-32 135
Msa0545180 MtrunA17_Chr3g0114401 29.766 299 156 5 1 246 226 523 9.70e-32 130
Msa0545180 MtrunA17_Chr2g0319921 26.448 518 288 13 6 440 363 870 1.16e-31 133
Msa0545180 MtrunA17_Chr6g0482191 41.509 212 84 6 71 242 248 459 1.50e-31 132
Msa0545180 MtrunA17_Chr2g0319821 30.194 361 191 7 6 307 392 750 1.74e-31 132
Msa0545180 MtrunA17_Chr6g0486271 30.636 346 171 8 5 288 350 688 4.00e-31 130
Msa0545180 MtrunA17_Chr7g0242781 33.200 250 131 4 1 216 130 377 4.51e-31 126
Msa0545180 MtrunA17_Chr6g0486311 30.601 366 179 12 5 303 350 707 4.62e-31 131
Msa0545180 MtrunA17_Chr3g0104861 30.058 346 175 7 6 287 346 688 4.74e-31 130
Msa0545180 MtrunA17_Chr6g0486221 25.169 592 319 17 5 491 350 922 8.36e-31 130
Msa0545180 MtrunA17_Chr4g0005101 29.008 393 187 9 6 312 390 776 1.12e-30 129
Msa0545180 MtrunA17_Chr8g0343661 29.570 372 192 10 6 309 62 431 1.86e-30 128
Msa0545180 MtrunA17_Chr4g0009361 33.205 259 144 5 115 347 1 256 2.47e-30 127
Msa0545180 MtrunA17_Chr4g0041951 29.508 366 184 8 6 319 417 760 2.46e-29 125
Msa0545180 MtrunA17_Chr4g0005731 31.250 336 162 9 6 273 343 677 5.75e-29 123
Msa0545180 MtrunA17_Chr6g0486731 30.347 346 181 8 14 303 368 709 7.04e-29 124
Msa0545180 MtrunA17_Chr2g0296451 32.794 247 143 3 115 339 8 253 8.37e-29 122
Msa0545180 MtrunA17_Chr8g0343671 26.245 522 264 14 6 461 393 859 1.21e-28 123
Msa0545180 MtrunA17_Chr6g0486301 26.387 595 308 18 5 495 350 918 1.61e-28 123
Msa0545180 MtrunA17_Chr1g0172811 27.515 487 271 13 6 448 355 803 2.01e-28 123
Msa0545180 MtrunA17_Chr4g0041931 27.795 331 184 5 6 281 364 694 8.64e-28 120
Msa0545180 MtrunA17_Chr8g0343801 36.649 191 88 3 1 158 350 540 1.18e-27 118
Msa0545180 MtrunA17_Chr5g0394041 25.835 449 253 10 45 422 1 440 1.35e-27 119
Msa0545180 MtrunA17_Chr4g0005261 28.381 525 289 16 6 461 346 852 1.41e-27 120
Msa0545180 MtrunA17_Chr2g0299561 28.338 367 192 9 5 306 350 710 4.51e-27 118
Msa0545180 MtrunA17_Chr8g0350071 37.895 190 81 4 1 157 130 315 5.13e-27 113
Msa0545180 MtrunA17_Chr8g0342791 25.651 538 294 12 6 448 329 855 1.11e-26 117
Msa0545180 MtrunA17_Chr8g0342641 24.717 530 309 14 6 448 335 861 1.31e-26 117
Msa0545180 MtrunA17_Chr8g0392051 33.203 256 128 7 1 215 126 379 1.67e-26 113
Msa0545180 MtrunA17_Chr6g0480871 50.962 104 48 1 115 215 31 134 5.57e-25 102
Msa0545180 MtrunA17_Chr6g0480991 69.863 73 22 0 6 78 53 125 5.96e-25 101
Msa0545180 MtrunA17_Chr5g0439951 25.235 531 305 14 6 448 344 870 2.57e-24 109
Msa0545180 MtrunA17_Chr6g0480091 68.056 72 23 0 6 77 359 430 2.80e-24 106
Msa0545180 MtrunA17_Chr8g0342621 25.181 552 308 15 4 459 342 884 6.16e-24 108
Msa0545180 MtrunA17_Chr8g0338851 34.848 198 94 5 1 165 248 443 6.68e-24 105
Msa0545180 MtrunA17_Chr5g0430541 29.762 252 146 4 115 336 8 258 1.40e-23 106
Msa0545180 MtrunA17_Chr8g0343631 27.666 347 183 10 6 287 370 713 2.18e-23 106
Msa0545180 MtrunA17_Chr4g0025801 82.143 56 10 0 680 735 1 56 2.76e-23 93.6
Msa0545180 MtrunA17_Chr8g0343611 25.994 327 174 9 6 267 185 508 1.14e-22 102
Msa0545180 MtrunA17_Chr4g0041941 26.097 433 246 11 6 373 351 774 1.47e-22 103
Msa0545180 MtrunA17_Chr1g0181031 60.000 75 28 1 443 517 3 75 1.92e-22 92.8
Msa0545180 MtrunA17_Chr1g0172831 26.027 365 188 8 6 306 355 701 3.61e-22 102
Msa0545180 MtrunA17_Chr8g0343581 24.038 520 278 9 6 461 400 866 8.55e-22 101
Msa0545180 MtrunA17_Chr6g0480351 40.909 132 33 2 567 653 1 132 1.17e-21 91.7
Msa0545180 MtrunA17_Chr8g0342691 26.742 531 275 17 6 451 343 844 1.40e-21 101
Msa0545180 MtrunA17_Chr6g0482311 53.409 88 41 0 226 313 1 88 5.53e-21 89.0
Msa0545180 MtrunA17_Chr3g0084761 37.097 124 59 1 177 281 1 124 3.23e-20 87.0
Msa0545180 MtrunA17_Chr7g0243031 26.984 378 221 10 113 451 6 367 4.67e-20 95.1
Msa0545180 MtrunA17_Chr8g0353431 46.364 110 59 0 1 110 334 443 4.69e-20 94.7
Msa0545180 MtrunA17_Chr4g0005371 46.465 99 53 0 6 104 136 234 5.22e-20 91.3
Msa0545180 MtrunA17_Chr8g0342671 25.835 569 310 19 6 472 341 899 5.90e-20 95.5
Msa0545180 MtrunA17_Chr8g0353401 44.144 111 62 0 1 111 344 454 1.83e-19 92.8
Msa0545180 MtrunA17_Chr7g0234901 26.374 364 224 5 115 448 8 357 2.08e-19 93.2
Msa0545180 MtrunA17_Chr4g0005341 31.128 257 146 8 106 337 1 251 3.49e-19 92.0
Msa0545180 MtrunA17_Chr8g0350081 25.791 411 249 10 113 474 6 409 3.79e-19 92.4
Msa0545180 MtrunA17_Chr8g0353361 41.593 113 66 0 1 113 348 460 7.59e-19 90.9
Msa0545180 MtrunA17_Chr6g0480861 41.071 168 73 3 316 457 1 168 1.89e-18 84.0
Msa0545180 MtrunA17_Chr4g0009021 42.342 111 63 1 1 110 18 128 3.85e-18 82.4
Msa0545180 MtrunA17_Chr4g0009281 32.716 162 74 3 87 216 2 160 4.74e-18 82.8
Msa0545180 MtrunA17_Chr8g0353351 40.708 113 67 0 1 113 348 460 8.56e-18 87.4
Msa0545180 MtrunA17_Chr8g0338841 30.159 189 110 3 173 339 14 202 2.25e-17 86.3
Msa0545180 MtrunA17_Chr8g0350111 31.401 207 107 5 113 287 6 209 2.44e-17 86.7
Msa0545180 MtrunA17_Chr1g0153501 32.370 173 83 7 455 622 1 144 5.81e-17 79.0
Msa0545180 MtrunA17_Chr2g0296461 36.634 101 63 1 1 100 132 232 1.14e-16 80.1
Msa0545180 MtrunA17_Chr8g0342781 34.272 213 102 5 6 183 343 552 1.62e-16 84.0
Msa0545180 MtrunA17_Chr6g0479771 30.000 230 126 7 536 743 4 220 3.53e-16 79.7
Msa0545180 MtrunA17_Chr6g0480261 57.333 75 25 3 563 636 35 103 3.55e-16 76.3
Msa0545180 MtrunA17_Chr7g0234891 40.351 114 66 2 1 112 265 378 3.21e-15 78.6
Msa0545180 MtrunA17_Chr4g0009351 40.517 116 58 3 1 110 257 367 6.80e-15 77.8
Msa0545180 MtrunA17_Chr3g0102241 31.176 170 87 4 113 254 6 173 1.09e-14 73.6
Msa0545180 MtrunA17_Chr3g0084771 56.716 67 29 0 1 67 352 418 1.27e-14 77.0
Msa0545180 MtrunA17_Chr6g0455171 40.909 88 51 1 115 202 47 133 1.62e-14 71.2
Msa0545180 MtrunA17_Chr8g0338821 31.481 162 78 3 87 216 2 162 2.92e-14 72.0
Msa0545180 MtrunA17_Chr8g0353381 29.348 184 90 6 453 622 1 158 2.94e-14 71.2
Msa0545180 MtrunA17_Chr8g0342741 34.973 183 84 4 6 154 343 524 7.58e-14 75.1
Msa0545180 MtrunA17_Chr1g0181061 82.051 39 7 0 6 44 110 148 2.22e-13 69.3
Msa0545180 MtrunA17_Chr8g0382351 35.897 117 64 2 113 219 24 139 4.36e-13 68.2
Msa0545180 MtrunA17_Chr6g0455181 36.134 119 74 1 220 336 8 126 1.71e-12 69.7
Msa0545180 MtrunA17_Chr1g0153991 31.217 189 115 6 170 349 605 787 5.73e-12 69.7
Msa0545180 MtrunA17_Chr6g0480931 31.098 164 81 8 473 626 5 146 1.03e-11 63.9
Msa0545180 MtrunA17_Chr5g0430531 37.647 85 53 0 1 85 348 432 1.05e-11 67.8
Msa0545180 MtrunA17_Chr3g0119591 32.667 150 79 3 148 275 247 396 1.22e-11 67.4
Msa0545180 MtrunA17_Chr4g0005601 31.126 151 81 2 177 304 1 151 1.45e-11 63.9
Msa0545180 MtrunA17_Chr8g0374461 33.858 127 81 2 216 339 603 729 6.43e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0545180 AT5G36930.3 32.164 513 271 12 6 443 349 859 3.03e-52 197
Msa0545180 AT5G36930.4 32.164 513 271 12 6 443 349 859 3.22e-52 197
Msa0545180 AT5G36930.1 32.164 513 271 12 6 443 349 859 3.22e-52 197
Msa0545180 AT5G36930.2 32.164 513 271 12 6 443 352 862 3.35e-52 197
Msa0545180 AT5G17680.1 28.972 535 299 15 1 465 343 866 5.39e-49 188
Msa0545180 AT5G17680.2 28.972 535 299 15 1 465 344 867 5.80e-49 188
Msa0545180 AT5G41750.1 26.780 646 328 20 2 548 345 944 6.19e-42 166
Msa0545180 AT5G41750.2 26.780 646 328 20 2 548 345 944 6.19e-42 166
Msa0545180 AT1G63870.1 26.825 589 312 17 2 511 346 894 1.52e-40 161
Msa0545180 AT5G41740.3 25.786 636 342 16 2 548 184 778 2.22e-40 160
Msa0545180 AT5G41740.1 25.786 636 342 16 2 548 336 930 3.16e-40 160
Msa0545180 AT5G41740.2 25.786 636 342 16 2 548 336 930 3.82e-40 160
Msa0545180 AT2G16870.3 25.610 574 311 12 2 495 72 609 1.67e-38 154
Msa0545180 AT2G16870.2 25.610 574 311 12 2 495 72 609 1.67e-38 154
Msa0545180 AT2G16870.1 26.839 503 277 10 2 446 346 815 1.83e-38 155
Msa0545180 AT1G27170.1 30.065 459 212 13 1 352 348 804 3.38e-38 154
Msa0545180 AT1G27170.2 30.065 459 212 13 1 352 348 804 4.24e-38 154
Msa0545180 AT5G40910.1 26.998 563 291 15 2 488 339 857 9.18e-37 149
Msa0545180 AT5G40910.9 26.998 563 291 15 2 488 339 857 9.18e-37 149
Msa0545180 AT5G40910.2 26.761 568 296 15 2 493 155 678 1.01e-36 149
Msa0545180 AT5G40910.3 26.761 568 296 15 2 493 155 678 1.01e-36 149
Msa0545180 AT5G40910.5 26.761 568 296 15 2 493 155 678 1.01e-36 149
Msa0545180 AT5G40910.7 26.761 568 296 15 2 493 155 678 1.01e-36 149
Msa0545180 AT5G40910.8 26.761 568 296 15 2 493 155 678 1.01e-36 149
Msa0545180 AT1G63750.1 25.608 617 334 18 2 530 184 763 1.85e-36 148
Msa0545180 AT1G63750.2 25.608 617 334 18 2 530 184 763 1.85e-36 148
Msa0545180 AT1G63750.3 25.608 617 334 18 2 530 351 930 2.35e-36 148
Msa0545180 AT5G41550.1 26.601 609 315 16 2 526 348 908 4.26e-36 147
Msa0545180 AT4G14370.1 25.480 573 308 13 2 494 305 838 1.72e-35 145
Msa0545180 AT4G14370.2 25.480 573 308 13 2 494 348 881 1.74e-35 145
Msa0545180 AT4G14370.3 25.480 573 308 13 2 494 348 881 1.74e-35 145
Msa0545180 AT5G38850.1 25.958 574 315 14 2 500 337 875 1.86e-35 145
Msa0545180 AT5G40910.6 27.944 501 271 12 2 448 155 619 5.32e-35 144
Msa0545180 AT5G40910.4 27.944 501 271 12 2 448 155 619 5.32e-35 144
Msa0545180 AT5G46260.1 28.316 392 217 6 2 333 348 735 1.64e-34 142
Msa0545180 AT5G18360.1 29.365 378 203 6 2 316 347 723 5.16e-34 140
Msa0545180 AT5G41540.1 25.997 577 297 17 2 493 347 878 1.50e-33 139
Msa0545180 AT1G27180.7 28.539 438 209 10 1 336 184 619 2.37e-33 139
Msa0545180 AT1G27180.6 28.539 438 209 10 1 336 184 619 2.37e-33 139
Msa0545180 AT1G27180.4 28.539 438 209 10 1 336 184 619 2.37e-33 139
Msa0545180 AT1G27180.3 28.539 438 209 10 1 336 360 795 2.39e-33 139
Msa0545180 AT1G27180.1 28.539 438 209 10 1 336 522 957 2.48e-33 139
Msa0545180 AT1G27180.5 28.539 438 209 10 1 336 358 793 2.99e-33 139
Msa0545180 AT1G27180.8 28.539 438 209 10 1 336 358 793 2.99e-33 139
Msa0545180 AT1G27180.2 28.539 438 209 10 1 336 360 795 3.26e-33 139
Msa0545180 AT5G49140.1 25.130 577 308 15 3 495 350 886 6.35e-32 134
Msa0545180 AT1G56540.1 23.818 571 320 14 2 493 347 881 1.01e-31 134
Msa0545180 AT1G56540.2 23.818 571 320 14 2 493 183 717 1.10e-31 133
Msa0545180 AT5G17970.1 28.606 409 226 9 2 348 355 759 1.50e-31 132
Msa0545180 AT1G63880.1 25.517 580 300 16 2 494 347 881 2.67e-31 132
Msa0545180 AT4G19510.2 25.565 708 335 23 6 579 351 1000 6.84e-31 131
Msa0545180 AT1G64070.1 25.130 577 298 18 2 491 347 876 7.37e-31 130
Msa0545180 AT1G56510.1 24.956 565 318 17 2 491 345 878 8.42e-31 130
Msa0545180 AT5G18350.1 26.118 559 329 14 3 493 367 909 2.61e-30 129
Msa0545180 AT5G38350.1 27.169 438 243 8 6 370 192 626 3.18e-30 128
Msa0545180 AT4G19510.8 32.047 337 188 7 6 309 391 719 4.94e-30 128
Msa0545180 AT4G19510.1 32.047 337 188 7 6 309 391 719 4.94e-30 128
Msa0545180 AT5G22690.4 27.750 400 221 9 2 337 350 745 9.16e-30 127
Msa0545180 AT5G22690.3 27.750 400 221 9 2 337 350 745 9.23e-30 127
Msa0545180 AT5G22690.2 27.750 400 221 9 2 337 350 745 1.06e-29 127
Msa0545180 AT5G40060.1 28.075 374 205 6 2 312 157 529 1.08e-29 127
Msa0545180 AT5G22690.1 27.750 400 221 9 2 337 350 745 1.26e-29 127
Msa0545180 AT5G46270.4 28.851 409 220 10 2 347 359 759 1.27e-29 127
Msa0545180 AT5G40060.2 28.075 374 205 6 2 312 157 529 1.32e-29 126
Msa0545180 AT5G46270.2 28.851 409 220 10 2 347 348 748 1.36e-29 127
Msa0545180 AT5G46270.3 28.851 409 220 10 2 347 348 748 1.40e-29 127
Msa0545180 AT5G46270.1 28.851 409 220 10 2 347 359 759 1.44e-29 127
Msa0545180 AT5G46270.5 28.851 409 220 10 2 347 359 759 1.44e-29 127
Msa0545180 AT4G12010.1 25.593 590 290 13 6 448 350 937 4.63e-29 125
Msa0545180 AT3G04220.1 27.007 411 224 8 4 339 401 810 4.90e-29 124
Msa0545180 AT1G56520.4 26.190 504 275 12 6 446 349 818 5.44e-29 124
Msa0545180 AT1G56520.3 26.190 504 275 12 6 446 187 656 6.81e-29 124
Msa0545180 AT1G56520.1 26.190 504 275 12 6 446 349 818 7.15e-29 124
Msa0545180 AT1G63860.4 24.096 581 304 15 30 518 346 881 8.42e-29 124
Msa0545180 AT1G63860.5 24.096 581 304 15 30 518 346 881 8.42e-29 124
Msa0545180 AT1G63860.3 24.096 581 304 15 30 518 346 881 8.42e-29 124
Msa0545180 AT1G56520.2 26.190 504 275 12 6 446 349 818 1.00e-28 124
Msa0545180 AT4G12020.6 31.514 403 201 14 72 409 1040 1432 1.09e-28 124
Msa0545180 AT4G12020.8 31.514 403 201 14 72 409 1040 1432 1.09e-28 124
Msa0545180 AT4G12020.7 29.605 456 237 15 21 409 994 1432 1.23e-28 124
Msa0545180 AT4G12020.4 29.605 456 237 15 21 409 994 1432 1.31e-28 124
Msa0545180 AT4G12020.10 32.931 331 156 9 72 341 1040 1365 1.34e-28 124
Msa0545180 AT4G12020.5 29.605 456 237 15 21 409 927 1365 1.35e-28 124
Msa0545180 AT1G63860.6 24.373 558 288 14 30 498 346 858 1.53e-28 123
Msa0545180 AT1G63860.2 24.373 558 288 14 30 498 346 858 1.68e-28 123
Msa0545180 AT1G63860.1 24.373 558 288 14 30 498 346 858 1.88e-28 123
Msa0545180 AT4G08450.2 27.390 544 266 18 2 472 347 834 2.27e-28 123
Msa0545180 AT4G08450.1 27.390 544 266 18 2 472 347 834 2.30e-28 123
Msa0545180 AT3G04220.3 25.909 440 221 9 4 339 401 839 2.39e-28 122
Msa0545180 AT4G19500.2 27.778 396 216 9 8 339 369 758 2.77e-28 122
Msa0545180 AT5G46450.3 27.806 392 218 10 2 333 349 735 2.99e-28 122
Msa0545180 AT5G11250.2 27.644 416 230 10 4 352 400 811 3.33e-28 122
Msa0545180 AT5G11250.2 26.087 345 170 13 200 498 795 1100 7.17e-12 70.1
Msa0545180 AT5G46450.2 27.806 392 218 10 2 333 326 712 3.41e-28 122
Msa0545180 AT5G11250.3 27.644 416 230 10 4 352 318 729 3.43e-28 122
Msa0545180 AT5G11250.3 26.087 345 170 13 200 498 713 1018 6.16e-12 70.1
Msa0545180 AT5G11250.1 27.644 416 230 10 4 352 318 729 3.43e-28 122
Msa0545180 AT5G11250.1 26.087 345 170 13 200 498 713 1018 6.16e-12 70.1
Msa0545180 AT5G46450.1 27.806 392 218 10 2 333 349 735 3.56e-28 122
Msa0545180 AT4G19500.1 27.778 396 216 9 8 339 892 1281 4.76e-28 122
Msa0545180 AT5G51630.5 27.614 373 208 7 2 312 277 649 4.91e-28 121
Msa0545180 AT4G19510.6 29.620 368 193 6 6 309 364 729 5.36e-28 122
Msa0545180 AT5G51630.4 27.614 373 208 7 2 312 277 649 5.50e-28 122
Msa0545180 AT5G51630.6 27.614 373 208 7 2 312 277 649 5.50e-28 122
Msa0545180 AT4G19510.9 29.891 368 192 6 6 309 364 729 5.78e-28 121
Msa0545180 AT4G19510.10 29.891 368 192 6 6 309 351 716 6.33e-28 121
Msa0545180 AT5G51630.3 27.614 373 208 7 2 312 293 665 6.55e-28 121
Msa0545180 AT4G19510.3 29.620 368 193 6 6 309 391 756 6.65e-28 121
Msa0545180 AT5G51630.1 27.614 373 208 7 2 312 341 713 6.86e-28 121
Msa0545180 AT4G19510.5 29.891 368 192 6 6 309 391 756 7.42e-28 121
Msa0545180 AT4G19510.4 29.891 368 192 6 6 309 391 756 7.42e-28 121
Msa0545180 AT4G19510.7 29.891 368 192 6 6 309 391 756 7.42e-28 121
Msa0545180 AT5G51630.2 27.614 373 208 7 2 312 277 649 7.49e-28 121
Msa0545180 AT4G12020.2 29.526 464 235 16 21 409 994 1440 1.06e-27 121
Msa0545180 AT1G63880.2 27.889 398 215 9 2 334 347 737 1.07e-27 120
Msa0545180 AT4G12020.3 30.900 411 201 14 72 409 1040 1440 1.17e-27 121
Msa0545180 AT4G12020.1 29.095 464 237 15 21 409 994 1440 1.25e-27 121
Msa0545180 AT4G12020.9 29.095 464 237 15 21 409 994 1440 1.25e-27 121
Msa0545180 AT4G16890.4 28.926 363 205 6 2 312 195 556 1.45e-27 120
Msa0545180 AT5G18370.1 25.658 456 246 10 2 371 408 856 1.65e-27 120
Msa0545180 AT4G16890.2 28.926 363 205 6 2 312 350 711 1.95e-27 120
Msa0545180 AT4G16890.1 28.926 363 205 6 2 312 350 711 2.26e-27 120
Msa0545180 AT4G16890.5 28.926 363 205 6 2 312 341 702 2.29e-27 120
Msa0545180 AT4G16890.3 28.926 363 205 6 2 312 341 702 2.56e-27 120
Msa0545180 AT1G31540.3 28.351 388 215 9 5 333 352 735 3.32e-27 119
Msa0545180 AT1G31540.1 28.351 388 215 9 5 333 352 735 3.32e-27 119
Msa0545180 AT1G31540.2 28.351 388 215 9 5 333 352 735 5.10e-27 119
Msa0545180 AT5G38340.2 27.381 420 214 10 2 333 188 604 5.78e-27 118
Msa0545180 AT1G72840.2 24.725 546 320 15 6 475 351 881 6.25e-27 118
Msa0545180 AT1G72840.3 24.725 546 320 15 6 475 351 881 6.25e-27 118
Msa0545180 AT1G72840.1 24.725 546 320 15 6 475 351 881 6.43e-27 118
Msa0545180 AT5G38340.3 27.381 420 214 10 2 333 394 810 6.69e-27 118
Msa0545180 AT5G38340.1 27.381 420 214 10 2 333 394 810 6.69e-27 118
Msa0545180 AT1G72840.4 24.725 546 320 15 6 475 185 715 1.13e-26 117
Msa0545180 AT2G14080.1 28.463 397 219 9 6 338 396 791 1.67e-26 117
Msa0545180 AT5G58120.1 25.467 589 335 20 2 514 349 909 1.82e-26 117
Msa0545180 AT4G16940.1 25.856 584 327 19 2 506 301 857 2.21e-26 116
Msa0545180 AT4G16940.4 25.856 584 327 19 2 506 301 857 2.22e-26 116
Msa0545180 AT2G14080.2 28.463 397 219 9 6 338 263 658 2.25e-26 116
Msa0545180 AT4G16940.6 25.856 584 327 19 2 506 301 857 2.76e-26 116
Msa0545180 AT4G16940.2 25.856 584 327 19 2 506 301 857 2.78e-26 116
Msa0545180 AT4G16940.3 25.856 584 327 19 2 506 301 857 2.78e-26 116
Msa0545180 AT4G16940.5 25.856 584 327 19 2 506 301 857 2.78e-26 116
Msa0545180 AT4G16960.1 25.258 582 331 19 2 506 345 899 5.26e-25 112
Msa0545180 AT5G44510.1 26.617 402 231 8 2 339 374 775 6.58e-25 112
Msa0545180 AT5G44510.4 26.617 402 231 8 2 339 374 775 6.86e-25 112
Msa0545180 AT5G44510.2 26.617 402 231 8 2 339 374 775 8.15e-25 111
Msa0545180 AT5G44510.3 26.617 402 231 8 2 339 374 775 8.40e-25 111
Msa0545180 AT5G46510.1 27.569 399 212 8 2 333 348 736 9.51e-25 111
Msa0545180 AT4G11170.1 25.373 402 230 7 2 337 345 742 1.11e-24 111
Msa0545180 AT5G46520.1 27.569 399 212 8 2 333 349 737 1.18e-24 111
Msa0545180 AT5G46510.2 27.569 399 212 8 2 333 348 736 1.23e-24 111
Msa0545180 AT1G65850.2 27.685 419 208 10 44 370 428 843 1.30e-24 110
Msa0545180 AT1G65850.3 27.685 419 208 10 44 370 303 718 1.44e-24 110
Msa0545180 AT5G46470.1 27.807 374 204 8 2 312 352 722 1.52e-24 110
Msa0545180 AT5G46520.2 27.569 399 212 8 2 333 387 775 1.57e-24 110
Msa0545180 AT1G65850.1 27.685 419 208 10 44 370 413 828 1.75e-24 110
Msa0545180 AT3G25505.1 28.746 327 173 6 44 310 210 536 1.88e-24 108
Msa0545180 AT5G45250.1 21.519 632 340 16 6 495 369 986 4.63e-24 109
Msa0545180 AT1G69550.1 25.536 560 310 17 6 467 419 969 6.40e-24 108
Msa0545180 AT1G69550.1 31.786 280 161 13 207 467 868 1136 4.17e-12 70.9
Msa0545180 AT5G48770.1 25.495 404 216 10 1 344 345 723 6.50e-24 108
Msa0545180 AT4G16920.3 26.844 339 190 5 2 285 339 674 4.71e-23 106
Msa0545180 AT4G16920.5 26.844 339 190 5 2 285 339 674 4.71e-23 106
Msa0545180 AT4G16920.2 26.844 339 190 5 2 285 339 674 4.97e-23 106
Msa0545180 AT4G16920.8 26.844 339 190 5 2 285 339 674 4.97e-23 106
Msa0545180 AT4G16920.6 26.844 339 190 5 2 285 339 674 6.20e-23 105
Msa0545180 AT4G16920.4 26.844 339 190 5 2 285 339 674 6.77e-23 105
Msa0545180 AT4G16920.7 26.844 339 190 5 2 285 339 674 6.77e-23 105
Msa0545180 AT4G16950.4 27.300 337 191 5 2 285 345 680 7.51e-23 105
Msa0545180 AT4G16950.6 27.300 337 191 5 2 285 345 680 7.80e-23 105
Msa0545180 AT4G16950.5 27.300 337 191 5 2 285 345 680 8.77e-23 105
Msa0545180 AT4G16950.2 27.300 337 191 5 2 285 345 680 8.78e-23 105
Msa0545180 AT4G16920.1 26.844 339 190 5 2 285 339 674 9.64e-23 105
Msa0545180 AT4G16920.9 26.844 339 190 5 2 285 339 674 9.98e-23 105
Msa0545180 AT4G16950.1 27.300 337 191 5 2 285 345 680 1.02e-22 105
Msa0545180 AT4G16950.3 27.300 337 191 5 2 285 345 680 1.10e-22 105
Msa0545180 AT1G63730.1 23.267 649 352 21 14 560 359 963 1.30e-22 104
Msa0545180 AT4G36140.2 27.328 494 275 22 6 438 558 1028 1.69e-22 104
Msa0545180 AT4G36140.1 27.328 494 275 22 6 438 743 1213 1.92e-22 104
Msa0545180 AT4G16900.2 27.907 344 206 8 2 312 334 668 2.64e-22 103
Msa0545180 AT4G16900.1 27.907 344 206 8 2 312 334 668 2.73e-22 103
Msa0545180 AT1G63740.2 22.513 573 305 17 14 496 389 912 5.56e-22 102
Msa0545180 AT1G63740.1 22.513 573 305 17 14 496 318 841 7.34e-22 102
Msa0545180 AT4G16900.3 27.545 334 202 7 2 302 334 660 9.55e-22 101
Msa0545180 AT5G45060.2 23.502 634 332 23 6 512 377 984 1.10e-21 101
Msa0545180 AT5G45060.1 23.502 634 332 23 6 512 377 984 1.10e-21 101
Msa0545180 AT1G57650.4 26.503 366 195 8 17 312 89 450 4.48e-21 99.0
Msa0545180 AT1G57650.3 26.503 366 195 8 17 312 89 450 4.68e-21 99.0
Msa0545180 AT1G57650.1 26.503 366 195 8 17 312 89 450 5.95e-21 98.6
Msa0545180 AT1G57650.2 26.975 367 192 9 17 312 89 450 7.66e-21 98.2
Msa0545180 AT3G25510.2 23.244 598 351 17 2 506 159 741 9.57e-21 98.6
Msa0545180 AT3G25510.1 23.244 598 351 17 2 506 159 741 9.57e-21 98.6
Msa0545180 AT3G44480.4 25.750 400 234 10 2 339 433 831 2.15e-20 97.4
Msa0545180 AT3G44480.1 25.750 400 234 10 2 339 433 831 2.15e-20 97.4
Msa0545180 AT3G44480.3 25.750 400 234 10 2 339 433 831 2.25e-20 97.4
Msa0545180 AT3G44480.5 25.750 400 234 10 2 339 433 831 2.25e-20 97.4
Msa0545180 AT3G44480.2 25.750 400 234 10 2 339 433 831 2.57e-20 97.4
Msa0545180 AT3G44670.1 23.663 617 335 20 2 495 429 1032 4.21e-20 96.7
Msa0545180 AT3G44670.2 23.663 617 335 20 2 495 429 1032 4.21e-20 96.7
Msa0545180 AT1G17600.1 23.264 576 335 19 6 484 348 913 6.10e-20 95.9
Msa0545180 AT5G44870.1 22.924 602 311 18 34 495 445 1033 1.21e-19 95.1
Msa0545180 AT5G44870.2 22.757 602 312 17 34 495 181 769 1.63e-19 94.4
Msa0545180 AT5G17880.1 22.886 603 312 20 32 495 400 988 1.70e-19 94.7
Msa0545180 AT5G17880.2 22.886 603 312 20 32 495 400 988 1.73e-19 94.7
Msa0545180 AT3G51570.2 22.664 578 313 18 32 495 400 957 2.33e-19 94.4
Msa0545180 AT4G36150.1 22.698 630 325 22 34 512 405 1023 6.25e-19 92.8
Msa0545180 AT4G16860.2 24.642 349 198 4 2 285 181 529 8.60e-19 92.4
Msa0545180 AT4G16860.1 24.642 349 198 4 2 285 343 691 9.62e-19 92.0
Msa0545180 AT1G72860.2 25.191 393 236 9 1 344 345 728 1.01e-18 92.0
Msa0545180 AT1G72860.3 25.191 393 236 9 1 344 345 728 1.12e-18 92.0
Msa0545180 AT3G51560.1 24.172 513 289 18 1 436 316 805 1.27e-18 92.0
Msa0545180 AT3G51570.1 23.307 502 296 15 32 460 400 885 3.55e-18 90.5
Msa0545180 AT2G17050.1 24.610 577 314 25 1 499 169 702 8.85e-18 89.4
Msa0545180 AT5G17890.1 24.346 497 282 16 6 438 331 797 1.06e-17 89.0
Msa0545180 AT2G17050.2 24.610 577 314 25 1 499 169 702 1.10e-17 89.0
Msa0545180 AT2G17050.3 24.610 577 314 25 1 499 169 702 1.31e-17 88.6
Msa0545180 AT5G45200.2 22.135 637 309 20 23 491 154 771 4.22e-17 86.7
Msa0545180 AT5G45200.1 22.135 637 309 20 23 491 398 1015 5.68e-17 86.7
Msa0545180 AT5G45200.3 22.810 548 286 16 23 448 398 930 1.92e-16 84.7
Msa0545180 AT4G12020.11 33.152 184 81 5 72 215 1040 1221 1.54e-15 82.0
Msa0545180 AT1G72860.1 23.585 424 235 10 1 344 345 759 5.22e-15 80.1
Msa0545180 AT5G45210.1 23.861 373 218 11 1 313 322 688 5.32e-14 76.3
Msa0545180 AT5G45210.5 23.861 373 218 11 1 313 341 707 5.44e-14 76.3
Msa0545180 AT5G45210.4 23.861 373 218 11 1 313 350 716 5.68e-14 76.3
Msa0545180 AT4G09430.1 30.601 183 97 3 6 158 347 529 8.09e-14 75.5
Msa0545180 AT2G17060.2 25.750 400 197 16 200 539 729 1088 5.29e-12 70.5
Msa0545180 AT2G17060.1 26.042 384 189 15 200 528 729 1072 9.59e-12 69.7

Find 144 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTTTGCTTATCACTAAA+TGG 0.214012 4_1:-35027514 Msa0545180:CDS
GGATTTAAATATCTGCTTTC+GGG 0.217123 4_1:-35026838 Msa0545180:CDS
TTCAATCTTAGTAGACAAAT+TGG 0.222834 4_1:-35025446 Msa0545180:CDS
TTAAGATTTCAAGTTTATTT+AGG 0.225718 4_1:+35027719 None:intergenic
ATATTTGTTTGATATGAATT+TGG 0.226062 4_1:-35026809 Msa0545180:CDS
GTCATCTTACATAATAATTC+TGG 0.226902 4_1:+35027598 None:intergenic
GACCCTTTAACCACATTCTT+AGG 0.247708 4_1:+35026664 None:intergenic
AGCTTAATTTAAGTATCTTT+TGG 0.264773 4_1:+35028645 None:intergenic
GACCTGAGACATTGGGTATA+TGG 0.266425 4_1:+35027812 None:intergenic
AACTTCTATTATTATTCTTC+CGG 0.272080 4_1:-35026926 Msa0545180:CDS
TGAAAATGGCAATTCTCTTC+TGG 0.277005 4_1:+35027543 None:intergenic
TTTCCATTCCAGTCTATTAC+AGG 0.283470 4_1:+35028176 None:intergenic
CGGATTTAAATATCTGCTTT+CGG 0.295469 4_1:-35026839 Msa0545180:CDS
GCTCTTTAGGTGATTCTTTA+CGG 0.305024 4_1:+35028418 None:intergenic
GAGATTTGTCATCTTCTTGA+AGG 0.306240 4_1:+35028151 None:intergenic
GTTCCTAAGAATGTGGTTAA+AGG 0.307167 4_1:-35026667 Msa0545180:CDS
CAAACGGAACAGAGGGGATT+AGG 0.310317 4_1:-35027023 Msa0545180:CDS
TGCTATTCACCAATCCTTAT+AGG 0.311614 4_1:-35025381 Msa0545180:CDS
TAAATTAAGCTTTGATGCTT+TGG 0.314173 4_1:-35028633 Msa0545180:CDS
ATAATAATAGAAGTTATAGA+AGG 0.326881 4_1:+35026934 None:intergenic
TCTTGTGTTTCGTCAAAGTT+CGG 0.337693 4_1:-35025253 Msa0545180:CDS
CGTGCAGTTGTGTATGCTTC+TGG 0.351658 4_1:-35028773 Msa0545180:CDS
CTTGTGTTTCGTCAAAGTTC+GGG 0.353993 4_1:-35025252 Msa0545180:CDS
TGAGGACCCTCAAATTGAAT+TGG 0.358034 4_1:-35027285 Msa0545180:CDS
GAATCCGTTGTTTGTTCAAA+AGG 0.358090 4_1:-35025534 Msa0545180:CDS
TAGAAGAATGTTATTGAGTC+AGG 0.362544 4_1:-35027176 Msa0545180:intron
AAAATCTCTTCATAACTTGA+AGG 0.365459 4_1:+35028800 None:intergenic
TTTAAGCTTCATTATTTCAA+TGG 0.374081 4_1:-35026691 Msa0545180:CDS
CAAACTCCTTGGAAAATACT+TGG 0.376165 4_1:+35028088 None:intergenic
CTTTGATGCTCGAACCAATC+TGG 0.376575 4_1:+35026997 None:intergenic
ATGAGGCTCAAATGCATTGA+TGG 0.385132 4_1:+35024988 None:intergenic
GTAGTGGGTTCCAACTTGTT+TGG 0.388274 4_1:-35028731 Msa0545180:CDS
TTAAGCTTCATTATTTCAAT+GGG 0.391145 4_1:-35026690 Msa0545180:CDS
CTAATCCCCTCTGTTCCGTT+TGG 0.395188 4_1:+35027024 None:intergenic
AGGGTCAAGAAGTACAGAAA+TGG 0.397388 4_1:-35026647 Msa0545180:CDS
CCCACTACTTCTATAGCTAA+TGG 0.400516 4_1:+35028746 None:intergenic
TAATCCCCTCTGTTCCGTTT+GGG 0.406125 4_1:+35027025 None:intergenic
AGATTTAATTTGTTTGTCAA+TGG 0.408351 4_1:-35026886 Msa0545180:CDS
TCCGTTTGGGAAACAAATAT+TGG 0.409014 4_1:+35027038 None:intergenic
TTCATTACTCTCAAACTCCT+TGG 0.415794 4_1:+35028077 None:intergenic
TTTCTTCAAAGGATGTAGAT+TGG 0.419561 4_1:-35028573 Msa0545180:CDS
ACCTGAGACATTGGGTATAT+GGG 0.420598 4_1:+35027813 None:intergenic
GGAGTTTGAGAGTAATGAAA+TGG 0.421730 4_1:-35028073 Msa0545180:CDS
GTGAAACTGCTAGACTTATC+TGG 0.427428 4_1:-35027355 Msa0545180:CDS
GATCAATTTCGAGTCTGAAA+TGG 0.431289 4_1:-35026752 Msa0545180:CDS
TCAATTTGAGGGTCCTCATA+AGG 0.432455 4_1:+35027290 None:intergenic
CTTAAGAGAGGGCAGCCATA+AGG 0.433449 4_1:+35027660 None:intergenic
ATGACAAATACAAAAGAGAT+TGG 0.437022 4_1:-35027580 Msa0545180:CDS
GATATTGCTTGTTTCTTCAA+AGG 0.437703 4_1:-35028584 Msa0545180:CDS
GACCATCTTGAGGAAATTAG+AGG 0.438049 4_1:-35027259 Msa0545180:CDS
GTCGTTCCAATTCAATTTGA+GGG 0.439445 4_1:+35027279 None:intergenic
TGTGTTTCTGCAGAGGTTTG+AGG 0.443474 4_1:-35027875 Msa0545180:intron
ACCAATATTTGTTTCCCAAA+CGG 0.445102 4_1:-35027039 Msa0545180:CDS
ATTTGGAAGACCTGAGACAT+TGG 0.447930 4_1:+35027804 None:intergenic
TTAGTGAATGTCACCTTATG+AGG 0.449954 4_1:-35027303 Msa0545180:CDS
TTAAAGATTTCCTTATGGAT+TGG 0.451831 4_1:-35025016 Msa0545180:intron
ATGAAGTAAAAGGGATGTCT+AGG 0.456677 4_1:-35028874 None:intergenic
ACTCCTTGGAGACATTCATA+TGG 0.458568 4_1:+35027397 None:intergenic
TCTTGAGTTGTTGAGGTGGA+TGG 0.463357 4_1:-35028843 Msa0545180:CDS
GGGTCAAGAAGTACAGAAAT+GGG 0.463747 4_1:-35026646 Msa0545180:CDS
TTCCTAAGAATGTGGTTAAA+GGG 0.469109 4_1:-35026666 Msa0545180:CDS
AGATATTTAAATCCGAGTTC+TGG 0.469182 4_1:+35026847 None:intergenic
TTAAGAGAGGGCAGCCATAA+GGG 0.470544 4_1:+35027661 None:intergenic
CAGTTGTACTGCAGCTCAGT+TGG 0.473980 4_1:-35025483 Msa0545180:CDS
ATTGCAATTCACGATTCGAT+TGG 0.476048 4_1:-35027745 Msa0545180:CDS
GCTTACTGAAACAGTAGAAA+AGG 0.476347 4_1:-35026407 Msa0545180:intron
ATATCTGAATTCTCCCTCAA+TGG 0.479222 4_1:-35028201 Msa0545180:CDS
GCATCAAGACATTTGAGATT+CGG 0.479310 4_1:+35027229 None:intergenic
ATCAGATGAAGATCAGAGCT+TGG 0.480179 4_1:-35025350 Msa0545180:CDS
GGTCGTTCCAATTCAATTTG+AGG 0.482789 4_1:+35027278 None:intergenic
ACATGACTTGCTAGAGGTCA+TGG 0.486018 4_1:-35028454 Msa0545180:intron
ACCCATATACCCAATGTCTC+AGG 0.486517 4_1:-35027814 Msa0545180:CDS
CACACAACTTGAGAACTCCT+TGG 0.488373 4_1:+35027383 None:intergenic
TTTGGAAGACCTGAGACATT+GGG 0.493031 4_1:+35027805 None:intergenic
CAATGGATCCTGTAATAGAC+TGG 0.494211 4_1:-35028184 Msa0545180:CDS
CTGTAAGTATATTCAACATC+CGG 0.494975 4_1:+35026907 None:intergenic
TAACAGCAATTACATGAGGC+TGG 0.496280 4_1:-35027066 Msa0545180:intron
GAATGCTGTAAAATATTTCA+CGG 0.497084 4_1:-35026775 Msa0545180:CDS
TATTTATCGAACAAAGAAAC+GGG 0.499929 4_1:-35025281 Msa0545180:CDS
CTGAAAAGCGTAGTCGGTTG+TGG 0.500180 4_1:-35028395 Msa0545180:CDS
GAAGAAAAGAAGCATGGAGC+AGG 0.507446 4_1:-35025407 Msa0545180:CDS
GATGGACAATCCAATCCATA+AGG 0.510496 4_1:+35025006 None:intergenic
CTAGATATATTCCTTGATCC+AGG 0.511157 4_1:-35026374 Msa0545180:intron
TCCATTAGCTATAGAAGTAG+TGG 0.519608 4_1:-35028747 Msa0545180:CDS
ACCCTCTAATTTCCTCAAGA+TGG 0.520350 4_1:+35027257 None:intergenic
TCATCATGCGACAAGTCTAC+AGG 0.520453 4_1:-35025571 Msa0545180:CDS
AGGGGATTAGGATTCCAGAT+TGG 0.523761 4_1:-35027011 Msa0545180:CDS
ATTGGTTCGAGCATCAAAGC+AGG 0.524388 4_1:-35026993 Msa0545180:CDS
TAATAATAGAAGTTATAGAA+GGG 0.526816 4_1:+35026935 None:intergenic
TAAATGGAAGTGAAATGCTC+AGG 0.528123 4_1:-35027498 Msa0545180:CDS
CTATTTATCGAACAAAGAAA+CGG 0.528582 4_1:-35025282 Msa0545180:CDS
TGTTTCCCAAACGGAACAGA+GGG 0.529376 4_1:-35027030 Msa0545180:CDS
ATAATGATGTACCTGGATCA+AGG 0.532133 4_1:+35026363 None:intergenic
AATGCTGTAAAATATTTCAC+GGG 0.536820 4_1:-35026774 Msa0545180:CDS
AATACTCTTTCCAAACAAGT+TGG 0.542629 4_1:+35028721 None:intergenic
CTCCTTGGAGACATTCATAT+GGG 0.543936 4_1:+35027398 None:intergenic
CCATTAGCTATAGAAGTAGT+GGG 0.545608 4_1:-35028746 Msa0545180:CDS
TGTCGCATGATGAATAAAGA+TGG 0.547510 4_1:+35025581 None:intergenic
AATCCGTTGTTTGTTCAAAA+GGG 0.550218 4_1:-35025533 Msa0545180:CDS
CAATGGGGTTCCTAAGAATG+TGG 0.552585 4_1:-35026674 Msa0545180:CDS
TCTATTACAGGATCCATTGA+GGG 0.563361 4_1:+35028188 None:intergenic
GTCTATTACAGGATCCATTG+AGG 0.564264 4_1:+35028187 None:intergenic
AAACTCCTTGGAAAATACTT+GGG 0.565319 4_1:+35028089 None:intergenic
AATGGGAATCCATGTGTGGA+AGG 0.567832 4_1:-35026629 Msa0545180:CDS
TTGAGAGTAATGAAATGGAA+TGG 0.571346 4_1:-35028068 Msa0545180:CDS
GATCCTGTAATAGACTGGAA+TGG 0.574833 4_1:-35028179 Msa0545180:CDS
GCCTTGGTGCAAATAAAAGA+TGG 0.575043 4_1:+35028026 None:intergenic
GCTGCCCTCTCTTAAGACAT+TGG 0.576824 4_1:-35027653 Msa0545180:CDS
AACAGCAATTACATGAGGCT+GGG 0.579655 4_1:-35027065 Msa0545180:intron
CAATAACATTCTTCTAGTTG+AGG 0.580440 4_1:+35027183 None:intergenic
TGAAGTAAAAGGGATGTCTA+GGG 0.584651 4_1:-35028873 None:intergenic
AGTTCCAATGTCTTAAGAGA+GGG 0.588556 4_1:+35027649 None:intergenic
CATGACTTGCTAGAGGTCAT+GGG 0.588773 4_1:-35028453 Msa0545180:intron
GAATTGGAACGACCATCTTG+AGG 0.592699 4_1:-35027269 Msa0545180:CDS
GAATGTACATTTCCAGAACT+CGG 0.594672 4_1:-35026859 Msa0545180:CDS
GGATATGAAAGTCTTGACAT+TGG 0.595980 4_1:-35027854 Msa0545180:CDS
CTCCCATATGAATGTCTCCA+AGG 0.597708 4_1:-35027400 Msa0545180:CDS
TCATAAGGTGACATTCACTA+AGG 0.604423 4_1:+35027305 None:intergenic
GAGTTCCAATGTCTTAAGAG+AGG 0.605165 4_1:+35027648 None:intergenic
AAGAGCCTGAAAAGCGTAGT+CGG 0.615752 4_1:-35028401 Msa0545180:CDS
TTGGTTCGAGCATCAAAGCA+GGG 0.616031 4_1:-35026992 Msa0545180:CDS
GTTCAAGAAGAAAAGAAGCA+TGG 0.616575 4_1:-35025413 Msa0545180:CDS
TCAAGACATTTGAGATTCGG+TGG 0.620477 4_1:+35027232 None:intergenic
AATATGCTCTTGAGTTGTTG+AGG 0.624447 4_1:-35028850 Msa0545180:CDS
GTGTCGATTATGCTATCACA+TGG 0.628470 4_1:-35024955 Msa0545180:CDS
ACCATCTTGAGGAAATTAGA+GGG 0.628797 4_1:-35027258 Msa0545180:CDS
TCAAGGAATATATCTAGCCA+TGG 0.629935 4_1:+35026380 None:intergenic
CTACTTCTATAGCTAATGGA+AGG 0.631551 4_1:+35028750 None:intergenic
GTGATAGCATAATCGACACT+AGG 0.635651 4_1:+35024959 None:intergenic
TGTAATAGACTGGAATGGAA+AGG 0.636957 4_1:-35028174 Msa0545180:CDS
TTGTTTCCCAAACGGAACAG+AGG 0.638791 4_1:-35027031 Msa0545180:CDS
TGACATTCACTAAGGCACTC+AGG 0.641103 4_1:+35027313 None:intergenic
AAACTAACAGCAATTACATG+AGG 0.644710 4_1:-35027070 Msa0545180:intron
ATGCTCTTGAGTTGTTGAGG+TGG 0.650518 4_1:-35028847 Msa0545180:CDS
TGGTTCGAGCATCAAAGCAG+GGG 0.662242 4_1:-35026991 Msa0545180:CDS
AGAGAGGGCAGCCATAAGGG+TGG 0.665703 4_1:+35027664 None:intergenic
CAGAAATGGGAATCCATGTG+TGG 0.679379 4_1:-35026633 Msa0545180:CDS
TAAGCTTCATTATTTCAATG+GGG 0.680243 4_1:-35026689 Msa0545180:CDS
CAGAAGCATACACAACTGCA+CGG 0.684968 4_1:+35028774 None:intergenic
ACTGAGCTGCAGTACAACTG+AGG 0.698305 4_1:+35025486 None:intergenic
ACAGTAGAAAAGGAACACCA+TGG 0.719726 4_1:-35026397 Msa0545180:intron
GTTTCCCAAACGGAACAGAG+GGG 0.721041 4_1:-35027029 Msa0545180:CDS
TCGACACTAGGACTTTCATG+AGG 0.730102 4_1:+35024971 None:intergenic
AAACTGCTAGACTTATCTGG+TGG 0.776027 4_1:-35027352 Msa0545180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAATATCAAGA+TGG + chr4_1:35028606-35028625 None:intergenic 10.0%
!!! TCAATATTTTATATGTATTG+TGG - chr4_1:35025522-35025541 Msa0545180:CDS 15.0%
!!! AATTTTTTTTTCCTGTTAAA+AGG - chr4_1:35025551-35025570 Msa0545180:CDS 15.0%
!!! ATTTTTTTTTCCTGTTAAAA+GGG - chr4_1:35025552-35025571 Msa0545180:CDS 15.0%
!!! TTAAGATTTCAAGTTTATTT+AGG + chr4_1:35026081-35026100 None:intergenic 15.0%
!! TAATAATAGAAGTTATAGAA+GGG + chr4_1:35026865-35026884 None:intergenic 15.0%
!! ATAATAATAGAAGTTATAGA+AGG + chr4_1:35026866-35026885 None:intergenic 15.0%
!! ATATTTGTTTGATATGAATT+TGG - chr4_1:35026988-35027007 Msa0545180:CDS 15.0%
!!! TATTTTTAAAGATTTCCTTA+TGG - chr4_1:35028776-35028795 Msa0545180:CDS 15.0%
!!! AGCTTAATTTAAGTATCTTT+TGG + chr4_1:35025155-35025174 None:intergenic 20.0%
!! GAACATGTAAATGTAATTAA+GGG + chr4_1:35025502-35025521 None:intergenic 20.0%
!! AGAACATGTAAATGTAATTA+AGG + chr4_1:35025503-35025522 None:intergenic 20.0%
!!! TAGTGATATTTATTTCTTGA+TGG + chr4_1:35025856-35025875 None:intergenic 20.0%
!!! CAAAGATTTTGAAATGAAAA+TGG + chr4_1:35026271-35026290 None:intergenic 20.0%
!!! ACATTTTATCATTGTGTTTT+GGG + chr4_1:35026327-35026346 None:intergenic 20.0%
!!! TACATTTTATCATTGTGTTT+TGG + chr4_1:35026328-35026347 None:intergenic 20.0%
!! AACTTCTATTATTATTCTTC+CGG - chr4_1:35026871-35026890 Msa0545180:CDS 20.0%
!!! AGATTTAATTTGTTTGTCAA+TGG - chr4_1:35026911-35026930 Msa0545180:CDS 20.0%
!!! AAGCACTTTTAAAAAATGAA+TGG - chr4_1:35027071-35027090 Msa0545180:intron 20.0%
!! TTTAAGCTTCATTATTTCAA+TGG - chr4_1:35027106-35027125 Msa0545180:intron 20.0%
!! TTAAGCTTCATTATTTCAAT+GGG - chr4_1:35027107-35027126 Msa0545180:intron 20.0%
!!! AATTTTCTCTTTCTACTATA+AGG + chr4_1:35027232-35027251 None:intergenic 20.0%
!!! TGATTTTCTCAAATTACTAT+TGG - chr4_1:35027590-35027609 Msa0545180:CDS 20.0%
!! ATTTATATGTATGAACTTGA+TGG - chr4_1:35027886-35027905 Msa0545180:intron 20.0%
! AAAATCTCTTCATAACTTGA+AGG + chr4_1:35025000-35025019 None:intergenic 25.0%
!! TAAATTAAGCTTTGATGCTT+TGG - chr4_1:35025164-35025183 Msa0545180:intron 25.0%
!! TAATTTTTATGAGGCTCTTT+AGG + chr4_1:35025292-35025311 None:intergenic 25.0%
!!! ATCAATCTTACTTTGTTTTC+CGG + chr4_1:35025455-35025474 None:intergenic 25.0%
!! AACGAGAGTTTTTCTAAATT+TGG + chr4_1:35026013-35026032 None:intergenic 25.0%
! GTCATCTTACATAATAATTC+TGG + chr4_1:35026202-35026221 None:intergenic 25.0%
! ATGACAAATACAAAAGAGAT+TGG - chr4_1:35026217-35026236 Msa0545180:intron 25.0%
! AATCTTTGCTTATCACTAAA+TGG - chr4_1:35026283-35026302 Msa0545180:intron 25.0%
!! TTCTACAATGTTTTCAAATG+TGG - chr4_1:35026348-35026367 Msa0545180:intron 25.0%
! GAATGCTGTAAAATATTTCA+CGG - chr4_1:35027022-35027041 Msa0545180:CDS 25.0%
! AATGCTGTAAAATATTTCAC+GGG - chr4_1:35027023-35027042 Msa0545180:CDS 25.0%
! TAAGCTTCATTATTTCAATG+GGG - chr4_1:35027108-35027127 Msa0545180:intron 25.0%
!! AATAATGATAATGATGTACC+TGG + chr4_1:35027444-35027463 None:intergenic 25.0%
! AATTTGAGAAAATCACATGT+CGG + chr4_1:35027585-35027604 None:intergenic 25.0%
! GGAGAAAAACAAAACAAAAT+TGG + chr4_1:35027745-35027764 None:intergenic 25.0%
! GGCTAAAATTTACAATATGA+TGG + chr4_1:35027840-35027859 None:intergenic 25.0%
!!! TTTTGTTGTTATCTCGAAAA+TGG - chr4_1:35027931-35027950 Msa0545180:intron 25.0%
!!! AAAGTTTGTTTTCTGCATAA+TGG - chr4_1:35028067-35028086 Msa0545180:CDS 25.0%
!! AGAGATTGTTGTTAAAAAGT+GGG + chr4_1:35028131-35028150 None:intergenic 25.0%
! TTCAATCTTAGTAGACAAAT+TGG - chr4_1:35028351-35028370 Msa0545180:intron 25.0%
! CTATTTATCGAACAAAGAAA+CGG - chr4_1:35028515-35028534 Msa0545180:intron 25.0%
! TATTTATCGAACAAAGAAAC+GGG - chr4_1:35028516-35028535 Msa0545180:intron 25.0%
! GAACTTTCATTTCAAAAAGT+TGG - chr4_1:35028741-35028760 Msa0545180:CDS 25.0%
! TTAAAGATTTCCTTATGGAT+TGG - chr4_1:35028781-35028800 Msa0545180:CDS 25.0%
AATACTCTTTCCAAACAAGT+TGG + chr4_1:35025079-35025098 None:intergenic 30.0%
! ATCTTTTGGATATCTTCATG+TGG + chr4_1:35025141-35025160 None:intergenic 30.0%
!! AGAACAACAAAGTGTCTTTT+TGG - chr4_1:35025191-35025210 Msa0545180:intron 30.0%
! GATATTGCTTGTTTCTTCAA+AGG - chr4_1:35025213-35025232 Msa0545180:intron 30.0%
TTTCTTCAAAGGATGTAGAT+TGG - chr4_1:35025224-35025243 Msa0545180:intron 30.0%
!! ACCACTGACTAATTTTTATG+AGG + chr4_1:35025301-35025320 None:intergenic 30.0%
! TGACATAGTTCATATTTTGC+CGG - chr4_1:35025433-35025452 Msa0545180:CDS 30.0%
! TTTACTTGTTCCCTTTTAAC+AGG + chr4_1:35025565-35025584 None:intergenic 30.0%
AAACTCCTTGGAAAATACTT+GGG + chr4_1:35025711-35025730 None:intergenic 30.0%
TTGAGAGTAATGAAATGGAA+TGG - chr4_1:35025729-35025748 Msa0545180:intron 30.0%
TGAAATTATTTCACTTGCCT+TGG + chr4_1:35025790-35025809 None:intergenic 30.0%
! CAATAACATTCTTCTAGTTG+AGG + chr4_1:35026617-35026636 None:intergenic 30.0%
TAGAAGAATGTTATTGAGTC+AGG - chr4_1:35026621-35026640 Msa0545180:CDS 30.0%
AAACTAACAGCAATTACATG+AGG - chr4_1:35026727-35026746 Msa0545180:CDS 30.0%
ACCAATATTTGTTTCCCAAA+CGG - chr4_1:35026758-35026777 Msa0545180:CDS 30.0%
CTGTAAGTATATTCAACATC+CGG + chr4_1:35026893-35026912 None:intergenic 30.0%
AGATATTTAAATCCGAGTTC+TGG + chr4_1:35026953-35026972 None:intergenic 30.0%
CGGATTTAAATATCTGCTTT+CGG - chr4_1:35026958-35026977 Msa0545180:CDS 30.0%
GGATTTAAATATCTGCTTTC+GGG - chr4_1:35026959-35026978 Msa0545180:CDS 30.0%
TTCCTAAGAATGTGGTTAAA+GGG - chr4_1:35027131-35027150 Msa0545180:intron 30.0%
!! AATCTATGCTATTTCAGTGT+AGG + chr4_1:35027292-35027311 None:intergenic 30.0%
ACTGAAATAGCATAGATTTG+TGG - chr4_1:35027294-35027313 Msa0545180:CDS 30.0%
!! ACCAATTAATTGTTTCTACC+TGG - chr4_1:35027474-35027493 Msa0545180:CDS 30.0%
TCCAGGTAGAAACAATTAAT+TGG + chr4_1:35027478-35027497 None:intergenic 30.0%
!!! TTTTTTTCCAGCTTGATTGA+TGG - chr4_1:35027675-35027694 Msa0545180:CDS 30.0%
AAAATTTCCATCAATCAAGC+TGG + chr4_1:35027685-35027704 None:intergenic 30.0%
! TTCGTTTCATAAGTCAGTTT+TGG - chr4_1:35027965-35027984 Msa0545180:intron 30.0%
! GAGATTGTTGTTAAAAAGTG+GGG + chr4_1:35028130-35028149 None:intergenic 30.0%
! GAGAGATTGTTGTTAAAAAG+TGG + chr4_1:35028132-35028151 None:intergenic 30.0%
AATCCGTTGTTTGTTCAAAA+GGG - chr4_1:35028264-35028283 Msa0545180:intron 30.0%
! TTTTCTCTTCCTATAAGGAT+TGG + chr4_1:35028428-35028447 None:intergenic 30.0%
! TCTGATTTTCTCTTCCTATA+AGG + chr4_1:35028433-35028452 None:intergenic 30.0%
! AATATGCTCTTGAGTTGTTG+AGG - chr4_1:35024947-35024966 Msa0545180:CDS 35.0%
CTACTTCTATAGCTAATGGA+AGG + chr4_1:35025050-35025069 None:intergenic 35.0%
TCCATTAGCTATAGAAGTAG+TGG - chr4_1:35025050-35025069 Msa0545180:intron 35.0%
CCATTAGCTATAGAAGTAGT+GGG - chr4_1:35025051-35025070 Msa0545180:intron 35.0%
GCTCTTTAGGTGATTCTTTA+CGG + chr4_1:35025279-35025298 None:intergenic 35.0%
GCCTCATAAAAATTAGTCAG+TGG - chr4_1:35025297-35025316 Msa0545180:CDS 35.0%
! GTAATGTCACTTCATTCAAG+TGG + chr4_1:35025325-35025344 None:intergenic 35.0%
GCTCTTTAGGTGATTCTTTA+CGG + chr4_1:35025279-35025298 None:intergenic 35.0%
ATATCTGAATTCTCCCTCAA+TGG - chr4_1:35025596-35025615 Msa0545180:intron 35.0%
TCTATTACAGGATCCATTGA+GGG + chr4_1:35025612-35025631 None:intergenic 35.0%
TTTCCATTCCAGTCTATTAC+AGG + chr4_1:35025624-35025643 None:intergenic 35.0%
TGTAATAGACTGGAATGGAA+AGG - chr4_1:35025623-35025642 Msa0545180:intron 35.0%
GAGATTTGTCATCTTCTTGA+AGG + chr4_1:35025649-35025668 None:intergenic 35.0%
! AAGATCCCAAGTATTTTCCA+AGG - chr4_1:35025703-35025722 Msa0545180:intron 35.0%
CAAACTCCTTGGAAAATACT+TGG + chr4_1:35025712-35025731 None:intergenic 35.0%
TTCATTACTCTCAAACTCCT+TGG + chr4_1:35025723-35025742 None:intergenic 35.0%
GGAGTTTGAGAGTAATGAAA+TGG - chr4_1:35025724-35025743 Msa0545180:intron 35.0%
!! ACCATCTTTTATTTGCACCA+AGG - chr4_1:35025770-35025789 Msa0545180:intron 35.0%
GGATATGAAAGTCTTGACAT+TGG - chr4_1:35025943-35025962 Msa0545180:intron 35.0%
ATTGCAATTCACGATTCGAT+TGG - chr4_1:35026052-35026071 Msa0545180:intron 35.0%
AGTTCCAATGTCTTAAGAGA+GGG + chr4_1:35026151-35026170 None:intergenic 35.0%
TGAAAATGGCAATTCTCTTC+TGG + chr4_1:35026257-35026276 None:intergenic 35.0%
TAAATGGAAGTGAAATGCTC+AGG - chr4_1:35026299-35026318 Msa0545180:intron 35.0%
TCATAAGGTGACATTCACTA+AGG + chr4_1:35026495-35026514 None:intergenic 35.0%
TTAGTGAATGTCACCTTATG+AGG - chr4_1:35026494-35026513 Msa0545180:intron 35.0%
GTCGTTCCAATTCAATTTGA+GGG + chr4_1:35026521-35026540 None:intergenic 35.0%
ACCATCTTGAGGAAATTAGA+GGG - chr4_1:35026539-35026558 Msa0545180:intron 35.0%
! GCATCAAGACATTTGAGATT+CGG + chr4_1:35026571-35026590 None:intergenic 35.0%
TCCGTTTGGGAAACAAATAT+TGG + chr4_1:35026762-35026781 None:intergenic 35.0%
! AAGGGATCTTTTTGCAGAAA+CGG + chr4_1:35026847-35026866 None:intergenic 35.0%
GAATGTACATTTCCAGAACT+CGG - chr4_1:35026938-35026957 Msa0545180:CDS 35.0%
! GATCAATTTCGAGTCTGAAA+TGG - chr4_1:35027045-35027064 Msa0545180:CDS 35.0%
GTTCCTAAGAATGTGGTTAA+AGG - chr4_1:35027130-35027149 Msa0545180:intron 35.0%
GGAGAAAAACAACATGAATG+AGG - chr4_1:35027189-35027208 Msa0545180:CDS 35.0%
ATAGCATAGATTTGTGGAAG+TGG - chr4_1:35027300-35027319 Msa0545180:CDS 35.0%
TAGCATAGATTTGTGGAAGT+GGG - chr4_1:35027301-35027320 Msa0545180:CDS 35.0%
GCTTACTGAAACAGTAGAAA+AGG - chr4_1:35027390-35027409 Msa0545180:CDS 35.0%
TCAAGGAATATATCTAGCCA+TGG + chr4_1:35027420-35027439 None:intergenic 35.0%
CTAGATATATTCCTTGATCC+AGG - chr4_1:35027423-35027442 Msa0545180:CDS 35.0%
ATAATGATGTACCTGGATCA+AGG + chr4_1:35027437-35027456 None:intergenic 35.0%
GTCATTTGAAAAACTCTTCC+AGG + chr4_1:35027495-35027514 None:intergenic 35.0%
!! GAAGAGTTTTTCAAATGACG+AGG - chr4_1:35027496-35027515 Msa0545180:CDS 35.0%
AGAAAATCACATGTCGGTAT+TGG + chr4_1:35027579-35027598 None:intergenic 35.0%
GGTTCAGAATGTCGAAATAA+AGG - chr4_1:35027775-35027794 Msa0545180:CDS 35.0%
CACAACAGATAAGCATAAAG+TGG + chr4_1:35027861-35027880 None:intergenic 35.0%
CACTTTATGCTTATCTGTTG+TGG - chr4_1:35027859-35027878 Msa0545180:CDS 35.0%
TGTTATCTCGAAAATGGAAG+TGG - chr4_1:35027937-35027956 Msa0545180:intron 35.0%
! TACTTCGAAGCATTACGTTA+AGG - chr4_1:35027993-35028012 Msa0545180:intron 35.0%
GTTGTTAAAAAGTGGGGATA+GGG + chr4_1:35028124-35028143 None:intergenic 35.0%
TGTTGTTAAAAAGTGGGGAT+AGG + chr4_1:35028125-35028144 None:intergenic 35.0%
AACCAAAACTATGCATTGTC+AGG - chr4_1:35028190-35028209 Msa0545180:CDS 35.0%
! TTCCTGACAATGCATAGTTT+TGG + chr4_1:35028195-35028214 None:intergenic 35.0%
TGTCGCATGATGAATAAAGA+TGG + chr4_1:35028219-35028238 None:intergenic 35.0%
GAATCCGTTGTTTGTTCAAA+AGG - chr4_1:35028263-35028282 Msa0545180:intron 35.0%
! TCTTTTCTTCTTGAACACAG+TGG + chr4_1:35028380-35028399 None:intergenic 35.0%
GTTCAAGAAGAAAAGAAGCA+TGG - chr4_1:35028384-35028403 Msa0545180:CDS 35.0%
TGCTATTCACCAATCCTTAT+AGG - chr4_1:35028416-35028435 Msa0545180:CDS 35.0%
! AATAGCTTTTCTGCCAAATG+TGG + chr4_1:35028500-35028519 None:intergenic 35.0%
TCTTGTGTTTCGTCAAAGTT+CGG - chr4_1:35028544-35028563 Msa0545180:intron 35.0%
GATTGAGACTAAACATCTGT+CGG + chr4_1:35028706-35028725 None:intergenic 35.0%
CCCACTACTTCTATAGCTAA+TGG + chr4_1:35025054-35025073 None:intergenic 40.0%
!! GACATTACATGACTTGCTAG+AGG - chr4_1:35025337-35025356 Msa0545180:CDS 40.0%
GTCTATTACAGGATCCATTG+AGG + chr4_1:35025613-35025632 None:intergenic 40.0%
CAATGGATCCTGTAATAGAC+TGG - chr4_1:35025613-35025632 Msa0545180:intron 40.0%
GATCCTGTAATAGACTGGAA+TGG - chr4_1:35025618-35025637 Msa0545180:intron 40.0%
! GCCTTGGTGCAAATAAAAGA+TGG + chr4_1:35025774-35025793 None:intergenic 40.0%
! TCTTCTTTGTGTTTCTGCAG+AGG - chr4_1:35025915-35025934 Msa0545180:intron 40.0%
ACCTGAGACATTGGGTATAT+GGG + chr4_1:35025987-35026006 None:intergenic 40.0%
TTTGGAAGACCTGAGACATT+GGG + chr4_1:35025995-35026014 None:intergenic 40.0%
ATTTGGAAGACCTGAGACAT+TGG + chr4_1:35025996-35026015 None:intergenic 40.0%
! TTGAGAGTTTTCCACCCTTA+TGG - chr4_1:35026122-35026141 Msa0545180:intron 40.0%
GAGTTCCAATGTCTTAAGAG+AGG + chr4_1:35026152-35026171 None:intergenic 40.0%
CTCCTTGGAGACATTCATAT+GGG + chr4_1:35026402-35026421 None:intergenic 40.0%
ACTCCTTGGAGACATTCATA+TGG + chr4_1:35026403-35026422 None:intergenic 40.0%
GTGAAACTGCTAGACTTATC+TGG - chr4_1:35026442-35026461 Msa0545180:intron 40.0%
AAACTGCTAGACTTATCTGG+TGG - chr4_1:35026445-35026464 Msa0545180:intron 40.0%
TCAATTTGAGGGTCCTCATA+AGG + chr4_1:35026510-35026529 None:intergenic 40.0%
TGAGGACCCTCAAATTGAAT+TGG - chr4_1:35026512-35026531 Msa0545180:intron 40.0%
GGTCGTTCCAATTCAATTTG+AGG + chr4_1:35026522-35026541 None:intergenic 40.0%
GACCATCTTGAGGAAATTAG+AGG - chr4_1:35026538-35026557 Msa0545180:intron 40.0%
ACCCTCTAATTTCCTCAAGA+TGG + chr4_1:35026543-35026562 None:intergenic 40.0%
! TCAAGACATTTGAGATTCGG+TGG + chr4_1:35026568-35026587 None:intergenic 40.0%
TAACAGCAATTACATGAGGC+TGG - chr4_1:35026731-35026750 Msa0545180:CDS 40.0%
AACAGCAATTACATGAGGCT+GGG - chr4_1:35026732-35026751 Msa0545180:CDS 40.0%
GACCCTTTAACCACATTCTT+AGG + chr4_1:35027136-35027155 None:intergenic 40.0%
! AGGGTCAAGAAGTACAGAAA+TGG - chr4_1:35027150-35027169 Msa0545180:intron 40.0%
! GGGTCAAGAAGTACAGAAAT+GGG - chr4_1:35027151-35027170 Msa0545180:intron 40.0%
! TGTTTTTCTCCTTCCACACA+TGG + chr4_1:35027180-35027199 None:intergenic 40.0%
!! CAACATCTAGCTTTAGTGTC+AGG - chr4_1:35027352-35027371 Msa0545180:CDS 40.0%
ACAGTAGAAAAGGAACACCA+TGG - chr4_1:35027400-35027419 Msa0545180:CDS 40.0%
ATGAAATACCGACACAGACA+CGG + chr4_1:35027645-35027664 None:intergenic 40.0%
! TGTCTGTGTCGGTATTTCAT+AGG - chr4_1:35027645-35027664 Msa0545180:CDS 40.0%
! TGTTTTTCTCCTCGCTCTAT+TGG - chr4_1:35027754-35027773 Msa0545180:CDS 40.0%
! TCGAAGCATTACGTTAAGGT+TGG - chr4_1:35027997-35028016 Msa0545180:intron 40.0%
! CTGCCCTTTTGAACAAACAA+CGG + chr4_1:35028270-35028289 None:intergenic 40.0%
ATCAGATGAAGATCAGAGCT+TGG - chr4_1:35028447-35028466 Msa0545180:intron 40.0%
! GAACTCGTGTTTTCCACATT+TGG - chr4_1:35028484-35028503 Msa0545180:intron 40.0%
CTTGTGTTTCGTCAAAGTTC+GGG - chr4_1:35028545-35028564 Msa0545180:intron 40.0%
GATGGACAATCCAATCCATA+AGG + chr4_1:35028794-35028813 None:intergenic 40.0%
ATGAGGCTCAAATGCATTGA+TGG + chr4_1:35028812-35028831 None:intergenic 40.0%
GTGATAGCATAATCGACACT+AGG + chr4_1:35028841-35028860 None:intergenic 40.0%
!! GTGTCGATTATGCTATCACA+TGG - chr4_1:35028842-35028861 Msa0545180:CDS 40.0%
! ATGCTCTTGAGTTGTTGAGG+TGG - chr4_1:35024950-35024969 Msa0545180:CDS 45.0%
! TCTTGAGTTGTTGAGGTGGA+TGG - chr4_1:35024954-35024973 Msa0545180:CDS 45.0%
! CAGAAGCATACACAACTGCA+CGG + chr4_1:35025026-35025045 None:intergenic 45.0%
!! GTAGTGGGTTCCAACTTGTT+TGG - chr4_1:35025066-35025085 Msa0545180:intron 45.0%
!! ACATGACTTGCTAGAGGTCA+TGG - chr4_1:35025343-35025362 Msa0545180:CDS 45.0%
!! CATGACTTGCTAGAGGTCAT+GGG - chr4_1:35025344-35025363 Msa0545180:CDS 45.0%
!! CTACGCTTTTCAGGCTCTTT+AGG + chr4_1:35025395-35025414 None:intergenic 45.0%
! AAGAGCCTGAAAAGCGTAGT+CGG - chr4_1:35025396-35025415 Msa0545180:CDS 45.0%
! TGTGTTTCTGCAGAGGTTTG+AGG - chr4_1:35025922-35025941 Msa0545180:intron 45.0%
ACCCATATACCCAATGTCTC+AGG - chr4_1:35025983-35026002 Msa0545180:intron 45.0%
GACCTGAGACATTGGGTATA+TGG + chr4_1:35025988-35026007 None:intergenic 45.0%
TTAAGAGAGGGCAGCCATAA+GGG + chr4_1:35026139-35026158 None:intergenic 45.0%
CTCCCATATGAATGTCTCCA+AGG - chr4_1:35026397-35026416 Msa0545180:intron 45.0%
CACACAACTTGAGAACTCCT+TGG + chr4_1:35026417-35026436 None:intergenic 45.0%
! TGACATTCACTAAGGCACTC+AGG + chr4_1:35026487-35026506 None:intergenic 45.0%
GAATTGGAACGACCATCTTG+AGG - chr4_1:35026528-35026547 Msa0545180:intron 45.0%
TTGTTTCCCAAACGGAACAG+AGG - chr4_1:35026766-35026785 Msa0545180:CDS 45.0%
TGTTTCCCAAACGGAACAGA+GGG - chr4_1:35026767-35026786 Msa0545180:CDS 45.0%
TAATCCCCTCTGTTCCGTTT+GGG + chr4_1:35026775-35026794 None:intergenic 45.0%
AGGGGATTAGGATTCCAGAT+TGG - chr4_1:35026786-35026805 Msa0545180:CDS 45.0%
CTTTGATGCTCGAACCAATC+TGG + chr4_1:35026803-35026822 None:intergenic 45.0%
!! ATTGGTTCGAGCATCAAAGC+AGG - chr4_1:35026804-35026823 Msa0545180:CDS 45.0%
! TTGGTTCGAGCATCAAAGCA+GGG - chr4_1:35026805-35026824 Msa0545180:CDS 45.0%
CAATGGGGTTCCTAAGAATG+TGG - chr4_1:35027123-35027142 Msa0545180:intron 45.0%
CAGAAATGGGAATCCATGTG+TGG - chr4_1:35027164-35027183 Msa0545180:intron 45.0%
AATGGGAATCCATGTGTGGA+AGG - chr4_1:35027168-35027187 Msa0545180:intron 45.0%
TTTGTGGAAGTGGGAGTTTC+AGG - chr4_1:35027310-35027329 Msa0545180:CDS 45.0%
TTGTGGAAGTGGGAGTTTCA+GGG - chr4_1:35027311-35027330 Msa0545180:CDS 45.0%
!! TAGCTTTAGTGTCAGGCATG+CGG - chr4_1:35027359-35027378 Msa0545180:CDS 45.0%
AGACACACACTTCTGATCCA+AGG - chr4_1:35027550-35027569 Msa0545180:CDS 45.0%
! TGACAAATCAGTGTCGAGTC+TGG - chr4_1:35027616-35027635 Msa0545180:CDS 45.0%
! TGTGTCGGTATTTCATAGGC+AGG - chr4_1:35027649-35027668 Msa0545180:CDS 45.0%
CATTCTGAACCAATAGAGCG+AGG + chr4_1:35027766-35027785 None:intergenic 45.0%
TACGTTAAGGTTGGCATGAG+TGG - chr4_1:35028006-35028025 Msa0545180:intron 45.0%
TCATCATGCGACAAGTCTAC+AGG - chr4_1:35028226-35028245 Msa0545180:CDS 45.0%
! GAAGAAAAGAAGCATGGAGC+AGG - chr4_1:35028390-35028409 Msa0545180:CDS 45.0%
TCGACACTAGGACTTTCATG+AGG + chr4_1:35028829-35028848 None:intergenic 45.0%
CGTGCAGTTGTGTATGCTTC+TGG - chr4_1:35025024-35025043 Msa0545180:intron 50.0%
! CACAACCGACTACGCTTTTC+AGG + chr4_1:35025404-35025423 None:intergenic 50.0%
! CTGAAAAGCGTAGTCGGTTG+TGG - chr4_1:35025402-35025421 Msa0545180:CDS 50.0%
CTTAAGAGAGGGCAGCCATA+AGG + chr4_1:35026140-35026159 None:intergenic 50.0%
GCTGCCCTCTCTTAAGACAT+TGG - chr4_1:35026144-35026163 Msa0545180:intron 50.0%
GTTTCCCAAACGGAACAGAG+GGG - chr4_1:35026768-35026787 Msa0545180:CDS 50.0%
CTAATCCCCTCTGTTCCGTT+TGG + chr4_1:35026776-35026795 None:intergenic 50.0%
CAAACGGAACAGAGGGGATT+AGG - chr4_1:35026774-35026793 Msa0545180:CDS 50.0%
TGGTTCGAGCATCAAAGCAG+GGG - chr4_1:35026806-35026825 Msa0545180:CDS 50.0%
! CATGTCGGTATTGGATGCCT+TGG + chr4_1:35027570-35027589 None:intergenic 50.0%
ACTGAGCTGCAGTACAACTG+AGG + chr4_1:35028314-35028333 None:intergenic 50.0%
CAGTTGTACTGCAGCTCAGT+TGG - chr4_1:35028314-35028333 Msa0545180:intron 50.0%
AGTGTCAGGCATGCGGAACT+TGG - chr4_1:35027366-35027385 Msa0545180:CDS 55.0%
TCTGGTGTCCGTGTCTGTGT+CGG - chr4_1:35027634-35027653 Msa0545180:CDS 55.0%
AGAGAGGGCAGCCATAAGGG+TGG + chr4_1:35026136-35026155 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 35024937 35028882 35024937 ID=Msa0545180;Name=Msa0545180
chr4_1 mRNA 35024937 35028882 35024937 ID=Msa0545180-mRNA-1;Parent=Msa0545180;Name=Msa0545180-mRNA-1;_AED=0.50;_eAED=0.50;_QI=0|0.14|0|0.25|1|1|8|0|800
chr4_1 exon 35028546 35028882 35028546 ID=Msa0545180-mRNA-1:exon:8865;Parent=Msa0545180-mRNA-1
chr4_1 exon 35028356 35028462 35028356 ID=Msa0545180-mRNA-1:exon:8864;Parent=Msa0545180-mRNA-1
chr4_1 exon 35028028 35028246 35028028 ID=Msa0545180-mRNA-1:exon:8863;Parent=Msa0545180-mRNA-1
chr4_1 exon 35027177 35027884 35027177 ID=Msa0545180-mRNA-1:exon:8862;Parent=Msa0545180-mRNA-1
chr4_1 exon 35026547 35027082 35026547 ID=Msa0545180-mRNA-1:exon:8861;Parent=Msa0545180-mRNA-1
chr4_1 exon 35026375 35026415 35026375 ID=Msa0545180-mRNA-1:exon:8860;Parent=Msa0545180-mRNA-1
chr4_1 exon 35025249 35025607 35025249 ID=Msa0545180-mRNA-1:exon:8859;Parent=Msa0545180-mRNA-1
chr4_1 exon 35024937 35025032 35024937 ID=Msa0545180-mRNA-1:exon:8858;Parent=Msa0545180-mRNA-1
chr4_1 CDS 35028546 35028882 35028546 ID=Msa0545180-mRNA-1:cds;Parent=Msa0545180-mRNA-1
chr4_1 CDS 35028356 35028462 35028356 ID=Msa0545180-mRNA-1:cds;Parent=Msa0545180-mRNA-1
chr4_1 CDS 35028028 35028246 35028028 ID=Msa0545180-mRNA-1:cds;Parent=Msa0545180-mRNA-1
chr4_1 CDS 35027177 35027884 35027177 ID=Msa0545180-mRNA-1:cds;Parent=Msa0545180-mRNA-1
chr4_1 CDS 35026547 35027082 35026547 ID=Msa0545180-mRNA-1:cds;Parent=Msa0545180-mRNA-1
chr4_1 CDS 35026375 35026415 35026375 ID=Msa0545180-mRNA-1:cds;Parent=Msa0545180-mRNA-1
chr4_1 CDS 35025249 35025607 35025249 ID=Msa0545180-mRNA-1:cds;Parent=Msa0545180-mRNA-1
chr4_1 CDS 35024937 35025032 35024937 ID=Msa0545180-mRNA-1:cds;Parent=Msa0545180-mRNA-1
Gene Sequence

>Msa0545180

ATGTCTAGGGAATATGCTCTTGAGTTGTTGAGGTGGATGGCTTTTAAAAATTACAAAGTTCCTTCAAGTTATGAAGAGATTTTAAACCGTGCAGTTGTGTATGCTTCTGGCCTTCCATTAGCTATAGAAGTAGTGGGTTCCAACTTGTTTGGAAAGAGTATTGCAGAATGTGAGTCTACATTAGATAAGTATGAAAGAATTCCACATGAAGATATCCAAAAGATACTTAAATTAAGCTTTGATGCTTTGGACGAAGAACAACAAAGTGTCTTTTTGGATATTGCTTGTTTCTTCAAAGGATGTAGATTGGAAGAAGTCGAAGAGATACTTCAACATCAGGTCATGGGCAAAGAAATCGTCCGTAAAGAATCACCTAAAGAGCCTGAAAAGCGTAGTCGGTTGTGGTGTCGTGATGACATAGTTCATATTTTGCCGGAAAACAAAGGAACAAGTAAAATTGAGATGATATATCTGAATTCTCCCTCAATGGATCCTGTAATAGACTGGAATGGAAAGGCCTTCAAGAAGATGACAAATCTCAAAACACTTGTTATTAAAAATGTCTCTTTTTCTAAAGATCCCAAGTATTTTCCAAGGAGTTTGAGAGTAATGAAATGGAATGGATGTTCTTCAGAGTCTCTACCATCTTTTATTTGCACCAAGAGGTTTGAGGATATGAAAGTCTTGACATTGGACAATTGTCAATATTTAACCCATATACCCAATGTCTCAGGTCTTCCAAATTTAGAAAAACTCTCGTTTCGAGAGTGTTATAATTTAATTGCAATTCACGATTCGATTGGAAACCTAAATAAACTTGAAATCTTAAATGCAAATGAATGCATCATGCTTGAGAGTTTTCCACCCTTATGGCTGCCCTCTCTTAAGACATTGGAACTCTCTTATTGTATAAGACTCAAGAGTTTTCCAGAATTATTATGTAAGATGACAAATACAAAAGAGATTGGAATGTGTATAACTTCCAGAAGAGAATTGCCATTTTCATTTCAAAATCTTTGCTTATCACTAAATGGAAGTGAAATGCTCAGGTTCCCAAAACACAATGATAAAATGTATTCTACAATGTTTTCAAATGTGGAAACTCTTCAGCTCAAAAATTACTATCTCCCATATGAATGTCTCCAAGGAGTTCTCAAGTTGTGTGTTAATGTGAAACTGCTAGACTTATCTGGTGGCAATTTCAAAATTCTTCCTGAGTGCCTTAGTGAATGTCACCTTATGAGGACCCTCAAATTGAATTGGAACGACCATCTTGAGGAAATTAGAGGGTTACCACCGAATCTCAAATGTCTTGATGCGTATGAATGTAAATCATTGAGTTCCTCAACTAGAAGAATGTTATTGAGTCAGCAATTACATGAGGCTGGGTGCACCAATATTTGTTTCCCAAACGGAACAGAGGGGATTAGGATTCCAGATTGGTTCGAGCATCAAAGCAGGGGTCAATCATTATCTTTCCGTTTCTGCAAAAAGATCCCTTCTATAACTTCTATTATTATTCTTCCGGATGTTGAATATACTTACAGATTTAATTTGTTTGTCAATGGTTACGAATGTACATTTCCAGAACTCGGATTTAAATATCTGCTTTCGGGACATACATATTTGTTTGATATGAATTTGGAAGAAAATATTGAATGCTGTAAAATATTTCACGGGATCAATTTCGAGTCTGAAATGGACAAAGCACTTTTAAAAAATGAATGGATCTATGTGAAGTTTAAGCTTCATTATTTCAATGGGGTTCCTAAGAATGTGGTTAAAGGGTCAAGAAGTACAGAAATGGGAATCCATGTGTGGAAGGAGAAAAACAACATGAATGAGGATGTGATATTCACGAATCCTTATAGTAGAAAGAGAAAATTAGATGAATATCTCAATGCTTCTAGAAAAGGAACACCATGGCTAGATATATTCCTTGATCCAGGAAACCATCTTTATTCATCATGCGACAAGTCTACAGGTCGCTCGCACAGCAGAATCCGTTGTTTGTTCAAAAGGGCAGTGAGTATTGATATGCTTTGCACCTCAGTTGTACTGCAGCTCAGTTGGAGAGTTTTGAGAATTTCAATCTTAGTAGACAAATTGGAATCCACTGTGTTCAAGAAGAAAAGAAGCATGGAGCAGGATGTGCTATTCACCAATCCTTATAGGAAGAGAAAATCAGATGAAGATCAGAGCTTGGATGTTTCTGAGACAGAACTCGTGTTTTCCACATTTGGCAGAAAAGCTATTTATCGAACAAAGAAACGGGATTATTCTTGTGTTTCGTCAAAGTTCGGGTTTATTTCCTTATGGATTGGATTGTCCATCAATGCATTTGAGCCTCATGAAAGTCCTAGTGTCGATTATGCTATCACATGGATTACTGTCTGCAAGTAG
Protein sequence

>Msa0545180

MSREYALELLRWMAFKNYKVPSSYEEILNRAVVYASGLPLAIEVVGSNLFGKSIAECESTLDKYERIPHEDIQKILKLSFDALDEEQQSVFLDIACFFKGCRLEEVEEILQHQVMGKEIVRKESPKEPEKRSRLWCRDDIVHILPENKGTSKIEMIYLNSPSMDPVIDWNGKAFKKMTNLKTLVIKNVSFSKDPKYFPRSLRVMKWNGCSSESLPSFICTKRFEDMKVLTLDNCQYLTHIPNVSGLPNLEKLSFRECYNLIAIHDSIGNLNKLEILNANECIMLESFPPLWLPSLKTLELSYCIRLKSFPELLCKMTNTKEIGMCITSRRELPFSFQNLCLSLNGSEMLRFPKHNDKMYSTMFSNVETLQLKNYYLPYECLQGVLKLCVNVKLLDLSGGNFKILPECLSECHLMRTLKLNWNDHLEEIRGLPPNLKCLDAYECKSLSSSTRRMLLSQQLHEAGCTNICFPNGTEGIRIPDWFEHQSRGQSLSFRFCKKIPSITSIIILPDVEYTYRFNLFVNGYECTFPELGFKYLLSGHTYLFDMNLEENIECCKIFHGINFESEMDKALLKNEWIYVKFKLHYFNGVPKNVVKGSRSTEMGIHVWKEKNNMNEDVIFTNPYSRKRKLDEYLNASRKGTPWLDIFLDPGNHLYSSCDKSTGRSHSRIRCLFKRAVSIDMLCTSVVLQLSWRVLRISILVDKLESTVFKKKRSMEQDVLFTNPYRKRKSDEDQSLDVSETELVFSTFGRKAIYRTKKRDYSCVSSKFGFISLWIGLSINAFEPHESPSVDYAITWITVCK*