AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0546970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0546970 MtrunA17_Chr4g0004981 98.222 450 8 0 1 450 1 450 0.0 917
Msa0546970 MtrunA17_Chr7g0243541 63.029 449 107 6 1 446 1 393 0.0 556
Msa0546970 MtrunA17_Chr2g0293201 48.844 346 167 6 107 446 124 465 5.73e-117 350
Msa0546970 MtrunA17_Chr8g0385291 51.479 338 153 7 104 437 161 491 1.04e-116 351
Msa0546970 MtrunA17_Chr4g0014901 49.107 336 161 6 107 437 254 584 1.62e-113 346
Msa0546970 MtrunA17_Chr3g0131071 48.980 343 166 6 94 432 219 556 2.41e-111 339
Msa0546970 MtrunA17_Chr4g0014911 44.961 387 192 9 68 445 87 461 2.79e-111 336
Msa0546970 MtrunA17_Chr1g0183881 38.690 336 194 6 107 437 129 457 7.02e-81 258
Msa0546970 MtrunA17_Chr3g0131581 28.372 215 128 7 123 330 67 262 8.94e-18 83.2
Msa0546970 MtrunA17_Chr5g0404711 29.646 226 136 7 125 336 76 292 1.04e-17 85.1
Msa0546970 MtrunA17_Chr8g0385691 29.384 211 131 6 123 330 47 242 1.30e-17 82.4
Msa0546970 MtrunA17_Chr8g0385681 28.436 211 133 6 123 330 50 245 1.35e-16 79.3
Msa0546970 MtrunA17_Chr3g0144911 27.753 227 139 8 125 336 110 326 1.06e-15 79.0
Msa0546970 MtrunA17_Chr4g0035391 27.273 220 137 7 125 330 107 317 3.34e-15 77.8
Msa0546970 MtrunA17_Chr4g0035381 29.412 221 131 8 125 330 84 294 3.14e-14 74.3
Msa0546970 MtrunA17_Chr3g0144891 28.889 225 139 8 125 336 97 313 1.81e-13 72.4
Msa0546970 MtrunA17_Chr1g0155521 27.149 221 136 8 125 330 112 322 2.45e-13 72.0
Msa0546970 MtrunA17_Chr4g0035361 27.232 224 144 6 125 336 1 217 1.89e-12 68.9
Msa0546970 MtrunA17_Chr3g0141821 29.148 223 129 9 125 330 93 303 1.91e-12 69.3
Msa0546970 MtrunA17_Chr1g0161441 25.877 228 151 6 122 344 28 242 5.04e-11 62.8
Msa0546970 MtrunA17_Chr8g0372651 29.075 227 136 7 125 336 79 295 7.43e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0546970 AT3G51670.1 72.381 420 99 4 31 450 6 408 0.0 631
Msa0546970 AT1G72160.1 44.725 436 201 14 27 445 76 488 1.04e-118 356
Msa0546970 AT4G09160.2 46.923 390 185 11 68 448 265 641 1.66e-114 350
Msa0546970 AT4G09160.3 46.923 390 185 11 68 448 265 641 2.48e-114 350
Msa0546970 AT4G09160.1 46.923 390 185 11 68 448 290 666 2.89e-114 350
Msa0546970 AT1G30690.1 46.389 360 178 7 88 442 183 532 2.17e-108 331
Msa0546970 AT1G30690.2 46.389 360 178 7 88 442 183 532 2.17e-108 331
Msa0546970 AT1G22530.2 44.083 338 170 10 107 437 316 641 4.85e-89 284
Msa0546970 AT1G22530.1 44.083 338 170 10 107 437 350 675 8.97e-89 284
Msa0546970 AT1G72150.1 42.105 342 176 11 109 442 243 570 1.06e-83 268
Msa0546970 AT4G36490.1 28.761 226 138 8 125 336 78 294 7.27e-17 83.6
Msa0546970 AT2G21540.6 30.531 226 134 8 125 336 95 311 2.92e-16 81.6
Msa0546970 AT2G21540.2 30.531 226 134 8 125 336 95 311 2.92e-16 81.6
Msa0546970 AT2G21540.1 30.531 226 134 8 125 336 95 311 2.92e-16 81.6
Msa0546970 AT2G21540.4 30.531 226 134 8 125 336 95 311 2.92e-16 81.6
Msa0546970 AT2G21540.3 30.531 226 134 8 125 336 95 311 3.30e-16 81.3
Msa0546970 AT2G21540.5 30.531 226 134 8 125 336 95 311 3.30e-16 81.3
Msa0546970 AT4G39170.2 26.962 293 180 12 125 399 108 384 1.61e-15 79.3
Msa0546970 AT4G39180.3 29.204 226 137 9 125 336 96 312 1.85e-15 79.0
Msa0546970 AT4G39180.2 29.204 226 137 9 125 336 96 312 1.85e-15 79.0
Msa0546970 AT4G39180.1 29.204 226 137 9 125 336 96 312 1.91e-15 79.0
Msa0546970 AT4G34580.2 29.075 227 136 9 125 336 88 304 2.49e-15 78.6
Msa0546970 AT4G34580.1 29.075 227 136 9 125 336 88 304 2.49e-15 78.6
Msa0546970 AT4G39170.1 27.391 230 143 9 125 340 108 327 2.82e-15 78.6
Msa0546970 AT2G18180.2 27.876 226 140 8 125 336 81 297 4.66e-15 77.8
Msa0546970 AT1G19650.3 31.004 229 129 9 125 336 104 320 5.10e-15 77.4
Msa0546970 AT1G19650.1 31.004 229 129 9 125 336 104 320 5.74e-15 77.8
Msa0546970 AT2G18180.1 27.876 226 140 8 125 336 81 297 5.80e-15 77.4
Msa0546970 AT2G16380.2 29.258 229 133 9 125 336 88 304 1.08e-14 76.6
Msa0546970 AT2G16380.1 29.258 229 133 9 125 336 88 304 1.08e-14 76.6
Msa0546970 AT1G01630.1 25.234 214 136 6 123 330 50 245 9.93e-13 68.6
Msa0546970 AT2G21520.2 25.743 202 126 7 120 305 107 300 1.76e-12 70.1
Msa0546970 AT2G21520.3 25.743 202 126 7 120 305 107 300 1.76e-12 70.1
Msa0546970 AT2G21520.1 25.743 202 126 7 120 305 103 296 1.93e-12 69.7
Msa0546970 AT1G55840.2 28.302 212 129 6 126 325 12 212 2.88e-12 67.8
Msa0546970 AT1G55840.1 28.302 212 129 6 126 325 39 239 4.12e-12 67.4
Msa0546970 AT2G18180.5 27.404 208 128 8 143 336 1 199 3.79e-11 65.5

Find 111 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTTCTAGCAACCATTTC+AGG 0.129763 4_1:-39561585 None:intergenic
AAGTTCTCACGGCAGAAATT+AGG 0.214324 4_1:-39563605 None:intergenic
CATGGCATGTTTAACTTTAG+AGG 0.237215 4_1:+39563799 Msa0546970:three_prime_UTR
AAGCTTACTTTCATCTCTAA+TGG 0.238529 4_1:+39560921 Msa0546970:CDS
GTGAACTCAGAAGCTGGTTT+TGG 0.239830 4_1:-39562744 None:intergenic
CTTGAAAGAGTGAGAGAATA+TGG 0.279238 4_1:-39561554 None:intergenic
CTTTGAAATATTGTTGATAT+AGG 0.287101 4_1:-39564100 None:intergenic
GGGATATTGTTGTTGGAGGC+TGG 0.293563 4_1:+39563333 Msa0546970:CDS
GAAGAATCCATCATCAAGTT+TGG 0.299542 4_1:-39560814 None:intergenic
CCTGTTTGTTACAATGCTTA+TGG 0.316584 4_1:+39561336 Msa0546970:CDS
CAAATGGGTCGGTGATTCTA+TGG 0.323753 4_1:-39560732 None:intergenic
TTTCATGCAAAGATTTCATC+TGG 0.325345 4_1:+39560777 Msa0546970:exon
AGCTTAAGAAGTTTCTTAGA+TGG 0.356798 4_1:+39561409 Msa0546970:CDS
TCTGAGGCTCCAATCTTCCT+TGG 0.363487 4_1:-39563422 None:intergenic
AAGTTCTTGAAAGAGGTATT+AGG 0.366149 4_1:+39561439 Msa0546970:CDS
TTGCCCAGTGATTTGCAAAA+TGG 0.368131 4_1:+39562717 Msa0546970:CDS
AGTTCTCACGGCAGAAATTA+GGG 0.368863 4_1:-39563604 None:intergenic
CAATTGGTTCTTGAAATTGT+AGG 0.371790 4_1:+39564059 Msa0546970:three_prime_UTR
AGCTTACTTTCATCTCTAAT+GGG 0.379990 4_1:+39560922 Msa0546970:CDS
CCCTGAAATGGTTGCTAGAA+AGG 0.383035 4_1:+39561584 Msa0546970:CDS
ATCACTTGGGATATTGTTGT+TGG 0.389749 4_1:+39563326 Msa0546970:CDS
GTGTAGCTACCTTCAGCATT+TGG 0.397734 4_1:-39563383 None:intergenic
TTCTTGTACCCTTTCTCTGA+AGG 0.400861 4_1:+39563751 Msa0546970:three_prime_UTR
GTTGAGAAGCCAAGGAAGAT+TGG 0.402510 4_1:+39563413 Msa0546970:CDS
CTACGTGAGTTTGGCTATCA+TGG 0.412428 4_1:+39563649 Msa0546970:three_prime_UTR
TCAAGATAACTACCCTGAAA+TGG 0.412828 4_1:+39561572 Msa0546970:CDS
TGAAGGTGCAATCTTACAAT+TGG 0.415307 4_1:+39564043 Msa0546970:three_prime_UTR
AGGTTGCGCCTACGTGAGTT+TGG 0.418124 4_1:+39563640 Msa0546970:three_prime_UTR
GGATATTGTTGTTGGAGGCT+GGG 0.418858 4_1:+39563334 Msa0546970:CDS
TTAATTTATATATGCAAAGT+TGG 0.436905 4_1:+39564145 Msa0546970:three_prime_UTR
TATGCCTAAAAGAGAGTTAA+GGG 0.439917 4_1:+39561521 Msa0546970:CDS
CTCAACCCTCCATACTGAAC+AGG 0.444430 4_1:-39562693 None:intergenic
TCTTGTACCCTTTCTCTGAA+GGG 0.447122 4_1:+39563752 Msa0546970:three_prime_UTR
ATATGCCTAAAAGAGAGTTA+AGG 0.449424 4_1:+39561520 Msa0546970:CDS
TCAAAATCCAAACTTGATGA+TGG 0.450211 4_1:+39560807 Msa0546970:CDS
TAGTTATCTTCTTCAAAAGA+AGG 0.450715 4_1:-39560979 None:intergenic
GAGGATATTCCTGTTCAGTA+TGG 0.450984 4_1:+39562684 Msa0546970:CDS
CCATAAGCATTGTAACAAAC+AGG 0.453091 4_1:-39561336 None:intergenic
CCTTGGCTTCTCAACTGCTA+TGG 0.460467 4_1:-39563405 None:intergenic
TTTAAGGATTTGAAGCAAAT+GGG 0.464332 4_1:-39560747 None:intergenic
AAATGAGACCCTTCAGAGAA+AGG 0.466198 4_1:-39563760 None:intergenic
AGTTATCTTCTTCAAAAGAA+GGG 0.472667 4_1:-39560978 None:intergenic
TGGGGTATTCCTCTCCTTGG+TGG 0.474210 4_1:+39561111 Msa0546970:CDS
ACTTGGGATATTGTTGTTGG+AGG 0.474804 4_1:+39563329 Msa0546970:CDS
ATGTGGGGTATTCCTCTCCT+TGG 0.477587 4_1:+39561108 Msa0546970:CDS
AAAGTGAATATACAAATAGA+AGG 0.487893 4_1:+39562783 Msa0546970:CDS
TCATTCACATCGAAAGAATC+CGG 0.497680 4_1:+39563461 Msa0546970:CDS
TGATTACAAAGTGTTTAGCT+TGG 0.501944 4_1:+39561208 Msa0546970:CDS
AGTTTGGCTATCATGGTGTC+CGG 0.504198 4_1:+39563656 Msa0546970:three_prime_UTR
CCTTTCTAGCAACCATTTCA+GGG 0.505289 4_1:-39561584 None:intergenic
GCTTCTGAGTTCACTGTCAA+AGG 0.505560 4_1:+39562753 Msa0546970:CDS
AATGAGACCCTTCAGAGAAA+GGG 0.507040 4_1:-39563759 None:intergenic
TTGACAGTGAACTCAGAAGC+TGG 0.507103 4_1:-39562750 None:intergenic
TTATGTTTCTGAACTTGTCA+TGG 0.508955 4_1:+39563781 Msa0546970:three_prime_UTR
CCACATGGAAACTTCACCAT+TGG 0.509679 4_1:-39561091 None:intergenic
CACATGGAAACTTCACCATT+GGG 0.513178 4_1:-39561090 None:intergenic
GAAATCTTTGCATGAAACGT+TGG 0.514993 4_1:-39560771 None:intergenic
TTAAGAAGTTTCTTAGATGG+AGG 0.517692 4_1:+39561412 Msa0546970:CDS
AAGTATCTTTGAAATTGCTA+AGG 0.521989 4_1:+39564120 Msa0546970:three_prime_UTR
CTTTCGATGTGAATGAGTTG+TGG 0.533441 4_1:-39563454 None:intergenic
AGGGTTCAAGTTCTTGAAAG+AGG 0.536058 4_1:+39561432 Msa0546970:CDS
TACTGAACAGGAATATCCTC+AGG 0.539885 4_1:-39562681 None:intergenic
CCATAGCAGTTGAGAAGCCA+AGG 0.541463 4_1:+39563405 Msa0546970:CDS
TATACAAATAGAAGGAATTG+AGG 0.543818 4_1:+39562791 Msa0546970:CDS
ATATTGTTGATATAGGACAT+TGG 0.546266 4_1:-39564093 None:intergenic
TAAGAAGTTTCTTAGATGGA+GGG 0.548172 4_1:+39561413 Msa0546970:CDS
TGCAAGTTGCAAACTACAGA+AGG 0.551526 4_1:+39564011 Msa0546970:three_prime_UTR
TTTCTCTGAGGATTTGAGAA+GGG 0.555742 4_1:-39561010 None:intergenic
GTTATCTTCTTCAAAAGAAG+GGG 0.557236 4_1:-39560977 None:intergenic
AGTAGTACTAGTATATTGCT+TGG 0.560898 4_1:+39563889 Msa0546970:three_prime_UTR
GATATTCCTGTTCAGTATGG+AGG 0.561935 4_1:+39562687 Msa0546970:CDS
GAGATAAAGATATGTATGAG+AGG 0.566379 4_1:+39561367 Msa0546970:CDS
AGGGAGGTGCAACTATCACT+TGG 0.570429 4_1:+39563312 Msa0546970:intron
CTGAGTTCACTGTCAAAGGA+GGG 0.573864 4_1:+39562757 Msa0546970:CDS
ATATTCCTGTTCAGTATGGA+GGG 0.579611 4_1:+39562688 Msa0546970:CDS
GTTGTGGATTGCTTCTTCTG+AGG 0.580281 4_1:-39563438 None:intergenic
CGTGTTATAGCTTATATGCA+AGG 0.583021 4_1:+39561294 Msa0546970:CDS
TCTGAGTTCACTGTCAAAGG+AGG 0.584412 4_1:+39562756 Msa0546970:CDS
ATCCGGCAAAATGATACTCT+CGG 0.584833 4_1:+39563478 Msa0546970:CDS
GAGCAAGTTTGTGATCTCAA+AGG 0.585716 4_1:+39562037 Msa0546970:CDS
CAATGGTGAAGTTTCCATGT+GGG 0.585875 4_1:+39561092 Msa0546970:CDS
AGGATTTGAAGCAAATGGGT+CGG 0.586107 4_1:-39560743 None:intergenic
CGGTGGACAACACTGCCTCA+AGG 0.590863 4_1:+39563498 Msa0546970:CDS
ATGAGAACAATGTTGGCACT+TGG 0.592967 4_1:+39563865 Msa0546970:three_prime_UTR
TTCATGCAAAGATTTCATCT+GGG 0.593880 4_1:+39560778 Msa0546970:exon
CTCACGTAGGCGCAACCTCA+AGG 0.594735 4_1:-39563635 None:intergenic
ATAAGAGAATTAACACCACC+AGG 0.601081 4_1:-39561477 None:intergenic
TGAGTTCACTGTCAAAGGAG+GGG 0.606287 4_1:+39562758 Msa0546970:CDS
CTTAATGGTGATATCTCAAG+TGG 0.615306 4_1:-39563567 None:intergenic
GCTCAGATTCATTAGACCTG+AGG 0.622030 4_1:+39562665 Msa0546970:intron
AAGTTTGTGATCTCAAAGGA+AGG 0.624122 4_1:+39562041 Msa0546970:CDS
GAGTTTGTTCCAAATGCTGA+AGG 0.625300 4_1:+39563374 Msa0546970:CDS
CTATCATCTCCACCAAGGAG+AGG 0.629348 4_1:-39561120 None:intergenic
TTTACTTGAGAGTGTGAATG+TGG 0.629848 4_1:-39560695 None:intergenic
TATGCAAGGCTATGACAAAG+AGG 0.630041 4_1:+39561308 Msa0546970:CDS
CCAATGGTGAAGTTTCCATG+TGG 0.637652 4_1:+39561091 Msa0546970:CDS
ATGCAAGGCTATGACAAAGA+GGG 0.646233 4_1:+39561309 Msa0546970:CDS
TACAACATGCTGAAGTACCA+TGG 0.646670 4_1:-39561978 None:intergenic
GGGAGGTGCAACTATCACTT+GGG 0.650638 4_1:+39563313 Msa0546970:intron
GAGAACTTGTCGTGACCTTG+AGG 0.651634 4_1:+39563620 Msa0546970:three_prime_UTR
AATGGTGATATCTCAAGTGG+TGG 0.651676 4_1:-39563564 None:intergenic
AAGGTCACGACAAGTTCTCA+CGG 0.653633 4_1:-39563616 None:intergenic
TTTCATTTGTGACTTCAAGG+AGG 0.654705 4_1:-39561059 None:intergenic
AATGGTGAAGTTTCCATGTG+GGG 0.660805 4_1:+39561093 Msa0546970:CDS
GCAAGTTGCAAACTACAGAA+GGG 0.662029 4_1:+39564012 Msa0546970:three_prime_UTR
GGTCACAACAAACAGTAACA+TGG 0.662068 4_1:-39563950 None:intergenic
AAGGAGAGGAATACCCCACA+TGG 0.675818 4_1:-39561106 None:intergenic
ACAGAAGGGTGACTTTGTGA+AGG 0.677372 4_1:+39564026 Msa0546970:three_prime_UTR
CAGCTCTATCATCTCCACCA+AGG 0.706930 4_1:-39561125 None:intergenic
CATGATAGCCAAACTCACGT+AGG 0.718673 4_1:-39563648 None:intergenic
CGGCAAAATGATACTCTCGG+TGG 0.749191 4_1:+39563481 Msa0546970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATAATTAAGTTAATTTT+AGG - chr4_1:39563004-39563023 None:intergenic 10.0%
!! ATAGAAAAAATTAAATTTCA+GGG - chr4_1:39563032-39563051 None:intergenic 10.0%
!! GATAGAAAAAATTAAATTTC+AGG - chr4_1:39563033-39563052 None:intergenic 15.0%
!! TTAATTTATATATGCAAAGT+TGG + chr4_1:39564145-39564164 Msa0546970:three_prime_UTR 15.0%
!!! TCTAAAATTATTAACTGTGT+CGG - chr4_1:39561684-39561703 None:intergenic 20.0%
!! ATTAAAGCTAGTACTTATTA+GGG - chr4_1:39561783-39561802 None:intergenic 20.0%
!! AATTAAAGCTAGTACTTATT+AGG - chr4_1:39561784-39561803 None:intergenic 20.0%
!!! ATATAATTGTTGTTCCATTT+TGG + chr4_1:39562094-39562113 Msa0546970:intron 20.0%
!! TGAATGCTAAAAGTAATAAA+TGG - chr4_1:39562261-39562280 None:intergenic 20.0%
!! AAAGTGAATATACAAATAGA+AGG + chr4_1:39562783-39562802 Msa0546970:CDS 20.0%
!!! TATGATTAGTTCTTTTCTTT+TGG + chr4_1:39562864-39562883 Msa0546970:intron 20.0%
!! AATTGTTTGAATTAGCAATT+TGG + chr4_1:39562976-39562995 Msa0546970:intron 20.0%
!!! TCTTTAATTTAATCCCTTAA+AGG - chr4_1:39563225-39563244 None:intergenic 20.0%
!! TTGAAAACAAGTTAAAAATC+CGG - chr4_1:39563678-39563697 None:intergenic 20.0%
!!! CTTTGAAATATTGTTGATAT+AGG - chr4_1:39564103-39564122 None:intergenic 20.0%
!! TTTAAGGATTTGAAGCAAAT+GGG - chr4_1:39560750-39560769 None:intergenic 25.0%
!!! TTTTAAGGATTTGAAGCAAA+TGG - chr4_1:39560751-39560770 None:intergenic 25.0%
!!! GTTTTGAAAAGGTGATTTTT+GGG - chr4_1:39560866-39560885 None:intergenic 25.0%
!!! AAGCTTTTTTTGGTTTGTTT+TGG - chr4_1:39560907-39560926 None:intergenic 25.0%
!!! AGATGAAAGTAAGCTTTTTT+TGG - chr4_1:39560917-39560936 None:intergenic 25.0%
! AGTTATCTTCTTCAAAAGAA+GGG - chr4_1:39560981-39561000 None:intergenic 25.0%
! TAGTTATCTTCTTCAAAAGA+AGG - chr4_1:39560982-39561001 None:intergenic 25.0%
!!! TTTTTTCATTTGTGACTTCA+AGG - chr4_1:39561065-39561084 None:intergenic 25.0%
! CATGATTTAGTTATGAAACA+CGG + chr4_1:39561628-39561647 Msa0546970:intron 25.0%
!!! TCATTTTTGTTGTTTTTGAG+TGG + chr4_1:39561879-39561898 Msa0546970:intron 25.0%
!!! AGTGTTTGTTTTTGCTTTTT+TGG + chr4_1:39561932-39561951 Msa0546970:intron 25.0%
!! GAAACAAATCTAAAATACCA+AGG - chr4_1:39562403-39562422 None:intergenic 25.0%
!!! ATTTTAGATTTGTTTCTCAC+TGG + chr4_1:39562407-39562426 Msa0546970:intron 25.0%
!! GAAACATTATTTGCTGATTA+TGG - chr4_1:39562591-39562610 None:intergenic 25.0%
!! TTTCTTTGTGTTTCCATTTT+GGG + chr4_1:39562614-39562633 Msa0546970:intron 25.0%
! TATACAAATAGAAGGAATTG+AGG + chr4_1:39562791-39562810 Msa0546970:CDS 25.0%
! ATCATAATCTGATCTTCATA+GGG - chr4_1:39562850-39562869 None:intergenic 25.0%
! AATCATAATCTGATCTTCAT+AGG - chr4_1:39562851-39562870 None:intergenic 25.0%
!! TGCTAATTCAAACAATTTTC+AGG - chr4_1:39562973-39562992 None:intergenic 25.0%
!!! TTATTAGCTGTTTTCATAGA+AGG + chr4_1:39563139-39563158 Msa0546970:intron 25.0%
! TTGATTTCATTTGCCTTTAA+GGG + chr4_1:39563209-39563228 Msa0546970:intron 25.0%
! TTGATCAAATTTCATACACA+TGG + chr4_1:39563246-39563265 Msa0546970:intron 25.0%
!!! GTTGTTTTTTTACTTGTTGT+GGG + chr4_1:39563281-39563300 Msa0546970:intron 25.0%
! TGTAAAAATGAGAACAATGT+TGG + chr4_1:39563858-39563877 Msa0546970:three_prime_UTR 25.0%
! ATATTGTTGATATAGGACAT+TGG - chr4_1:39564096-39564115 None:intergenic 25.0%
!!! AAGTATCTTTGAAATTGCTA+AGG + chr4_1:39564120-39564139 Msa0546970:three_prime_UTR 25.0%
!!! ACTGTGTTTTTTTGAGTTTG+AGG - chr4_1:39560643-39560662 None:intergenic 30.0%
TTTCATGCAAAGATTTCATC+TGG + chr4_1:39560777-39560796 Msa0546970:exon 30.0%
TTCATGCAAAGATTTCATCT+GGG + chr4_1:39560778-39560797 Msa0546970:exon 30.0%
TCAAAATCCAAACTTGATGA+TGG + chr4_1:39560807-39560826 Msa0546970:CDS 30.0%
!!! CGTTTTGAAAAGGTGATTTT+TGG - chr4_1:39560867-39560886 None:intergenic 30.0%
!!! TTTTTTGGTTTGTTTTGGTG+AGG - chr4_1:39560902-39560921 None:intergenic 30.0%
AAGCTTACTTTCATCTCTAA+TGG + chr4_1:39560921-39560940 Msa0546970:CDS 30.0%
AGCTTACTTTCATCTCTAAT+GGG + chr4_1:39560922-39560941 Msa0546970:CDS 30.0%
GTTATCTTCTTCAAAAGAAG+GGG - chr4_1:39560980-39560999 None:intergenic 30.0%
AATGAAAAAAACTCTCCCAA+TGG + chr4_1:39561075-39561094 Msa0546970:CDS 30.0%
! TGATTACAAAGTGTTTAGCT+TGG + chr4_1:39561208-39561227 Msa0546970:CDS 30.0%
GAGATAAAGATATGTATGAG+AGG + chr4_1:39561367-39561386 Msa0546970:CDS 30.0%
! GATATGTATGAGAGGATTTT+TGG + chr4_1:39561375-39561394 Msa0546970:CDS 30.0%
AGCTTAAGAAGTTTCTTAGA+TGG + chr4_1:39561409-39561428 Msa0546970:CDS 30.0%
TTAAGAAGTTTCTTAGATGG+AGG + chr4_1:39561412-39561431 Msa0546970:CDS 30.0%
TAAGAAGTTTCTTAGATGGA+GGG + chr4_1:39561413-39561432 Msa0546970:CDS 30.0%
!! AAGTTCTTGAAAGAGGTATT+AGG + chr4_1:39561439-39561458 Msa0546970:CDS 30.0%
ATATGCCTAAAAGAGAGTTA+AGG + chr4_1:39561520-39561539 Msa0546970:CDS 30.0%
TATGCCTAAAAGAGAGTTAA+GGG + chr4_1:39561521-39561540 Msa0546970:CDS 30.0%
TTAGTTATGAAACACGGATA+CGG + chr4_1:39561634-39561653 Msa0546970:intron 30.0%
!! GTCTCTAAAGTACAAGAAAT+TGG - chr4_1:39561818-39561837 None:intergenic 30.0%
!!! TTTGTTGTTTTTGAGTGGAT+TGG + chr4_1:39561884-39561903 Msa0546970:intron 30.0%
!!! GTTTGTTTTTGCTTTTTTGG+TGG + chr4_1:39561935-39561954 Msa0546970:intron 30.0%
!! TTAGTCCATTTTTGACACAA+AGG + chr4_1:39562009-39562028 Msa0546970:CDS 30.0%
TTAGTCCTTTGTGTCAAAAA+TGG - chr4_1:39562017-39562036 None:intergenic 30.0%
GACAGAAAAACAAACCAAAA+TGG - chr4_1:39562111-39562130 None:intergenic 30.0%
GTGTATTTGTGACTAGTAAA+AGG - chr4_1:39562146-39562165 None:intergenic 30.0%
!!! CTGATCTAGAATGTTTTAGT+TGG + chr4_1:39562165-39562184 Msa0546970:intron 30.0%
! TGTGCTGACAAAATAAAAAG+TGG - chr4_1:39562339-39562358 None:intergenic 30.0%
!! TTATTTTGTCAGCACATTTG+TGG + chr4_1:39562343-39562362 Msa0546970:intron 30.0%
AATCAACACAATCAGTACAT+CGG - chr4_1:39562467-39562486 None:intergenic 30.0%
! TAATACCACCATGATTTTGA+TGG - chr4_1:39562520-39562539 None:intergenic 30.0%
! CTTTCTTTGTGTTTCCATTT+TGG + chr4_1:39562613-39562632 Msa0546970:intron 30.0%
! TTCTTTGTGTTTCCATTTTG+GGG + chr4_1:39562615-39562634 Msa0546970:intron 30.0%
! GTTGATTTCATTTGCCTTTA+AGG + chr4_1:39563208-39563227 Msa0546970:intron 30.0%
!!! GGTTGTTTTTTTACTTGTTG+TGG + chr4_1:39563280-39563299 Msa0546970:intron 30.0%
! TTATGTTTCTGAACTTGTCA+TGG + chr4_1:39563781-39563800 Msa0546970:three_prime_UTR 30.0%
AGTAGTACTAGTATATTGCT+TGG + chr4_1:39563889-39563908 Msa0546970:three_prime_UTR 30.0%
! CAATTGGTTCTTGAAATTGT+AGG + chr4_1:39564059-39564078 Msa0546970:three_prime_UTR 30.0%
! TTTACTTGAGAGTGTGAATG+TGG - chr4_1:39560698-39560717 None:intergenic 35.0%
!!! TGCATGAAACGTTGGTTTTA+AGG - chr4_1:39560766-39560785 None:intergenic 35.0%
GAAATCTTTGCATGAAACGT+TGG - chr4_1:39560774-39560793 None:intergenic 35.0%
GAAGAATCCATCATCAAGTT+TGG - chr4_1:39560817-39560836 None:intergenic 35.0%
!!! TCTTCAGGTACGTTTTGAAA+AGG - chr4_1:39560877-39560896 None:intergenic 35.0%
! TTTCTCTGAGGATTTGAGAA+GGG - chr4_1:39561013-39561032 None:intergenic 35.0%
!! TTTTCTCTGAGGATTTGAGA+AGG - chr4_1:39561014-39561033 None:intergenic 35.0%
!!! TTGAAGTGCTTTTTTCTCTG+AGG - chr4_1:39561025-39561044 None:intergenic 35.0%
!!! CTTCAAGGAGGTTTTTTTTG+AGG - chr4_1:39561050-39561069 None:intergenic 35.0%
TTTCATTTGTGACTTCAAGG+AGG - chr4_1:39561062-39561081 None:intergenic 35.0%
CGTGTTATAGCTTATATGCA+AGG + chr4_1:39561294-39561313 Msa0546970:CDS 35.0%
! CCATAAGCATTGTAACAAAC+AGG - chr4_1:39561339-39561358 None:intergenic 35.0%
! CCTGTTTGTTACAATGCTTA+TGG + chr4_1:39561336-39561355 Msa0546970:CDS 35.0%
ATAAGAGAATTAACACCACC+AGG - chr4_1:39561480-39561499 None:intergenic 35.0%
CTTGAAAGAGTGAGAGAATA+TGG - chr4_1:39561557-39561576 None:intergenic 35.0%
TCAAGATAACTACCCTGAAA+TGG + chr4_1:39561572-39561591 Msa0546970:CDS 35.0%
!!! TTGTTTTTGAGTGGATTGGT+TGG + chr4_1:39561888-39561907 Msa0546970:intron 35.0%
! AGATTTTCATCAATGTGCCA+TGG + chr4_1:39561961-39561980 Msa0546970:intron 35.0%
AAGTTTGTGATCTCAAAGGA+AGG + chr4_1:39562041-39562060 Msa0546970:CDS 35.0%
GTCGTTGAATCGAAATTAGA+TGG + chr4_1:39562365-39562384 Msa0546970:intron 35.0%
GATGGTTTAGATTTCATCCT+TGG + chr4_1:39562383-39562402 Msa0546970:intron 35.0%
ACTGCAATCCATCAAAATCA+TGG + chr4_1:39562509-39562528 Msa0546970:intron 35.0%
ATATTCCTGTTCAGTATGGA+GGG + chr4_1:39562688-39562707 Msa0546970:CDS 35.0%
AGGGAAGAGTAAAATGGTAT+GGG - chr4_1:39562831-39562850 None:intergenic 35.0%
TAGGGAAGAGTAAAATGGTA+TGG - chr4_1:39562832-39562851 None:intergenic 35.0%
CTTCATAGGGAAGAGTAAAA+TGG - chr4_1:39562837-39562856 None:intergenic 35.0%
ATCACTTGGGATATTGTTGT+TGG + chr4_1:39563326-39563345 Msa0546970:CDS 35.0%
TCATTCACATCGAAAGAATC+CGG + chr4_1:39563461-39563480 Msa0546970:CDS 35.0%
!!! AGCAACTTTTTTCTTCCTTG+AGG - chr4_1:39563516-39563535 None:intergenic 35.0%
CTTAATGGTGATATCTCAAG+TGG - chr4_1:39563570-39563589 None:intergenic 35.0%
! GTTTTCAAACACACGCTTAA+TGG - chr4_1:39563585-39563604 None:intergenic 35.0%
!! AACTTGTTTTCAAACACACG+CGG + chr4_1:39563685-39563704 Msa0546970:three_prime_UTR 35.0%
! CATGGCATGTTTAACTTTAG+AGG + chr4_1:39563799-39563818 Msa0546970:three_prime_UTR 35.0%
!!! ACTGTTTGTTGTGACCTTTT+TGG + chr4_1:39563957-39563976 Msa0546970:three_prime_UTR 35.0%
!! TTTGTTGTGACCTTTTTGGT+GGG + chr4_1:39563961-39563980 Msa0546970:three_prime_UTR 35.0%
! TGAAGGTGCAATCTTACAAT+TGG + chr4_1:39564043-39564062 Msa0546970:three_prime_UTR 35.0%
! AGGATTTGAAGCAAATGGGT+CGG - chr4_1:39560746-39560765 None:intergenic 40.0%
!!! TTTTGGGTTTGAAGAGACAG+AGG - chr4_1:39560850-39560869 None:intergenic 40.0%
!!! TGTTTTGGTGAGGATTCTTC+AGG - chr4_1:39560892-39560911 None:intergenic 40.0%
CACATGGAAACTTCACCATT+GGG - chr4_1:39561093-39561112 None:intergenic 40.0%
CAATGGTGAAGTTTCCATGT+GGG + chr4_1:39561092-39561111 Msa0546970:CDS 40.0%
AATGGTGAAGTTTCCATGTG+GGG + chr4_1:39561093-39561112 Msa0546970:CDS 40.0%
TATGCAAGGCTATGACAAAG+AGG + chr4_1:39561308-39561327 Msa0546970:CDS 40.0%
ATGCAAGGCTATGACAAAGA+GGG + chr4_1:39561309-39561328 Msa0546970:CDS 40.0%
! AGGGTTCAAGTTCTTGAAAG+AGG + chr4_1:39561432-39561451 Msa0546970:CDS 40.0%
! AGGCTTCTTCATTTTAAGCC+TGG + chr4_1:39561459-39561478 Msa0546970:CDS 40.0%
! CTTCTTCATTTTAAGCCTGG+TGG + chr4_1:39561462-39561481 Msa0546970:CDS 40.0%
! GCAACCCTTAACTCTCTTTT+AGG - chr4_1:39561528-39561547 None:intergenic 40.0%
! CCTTTCTAGCAACCATTTCA+GGG - chr4_1:39561587-39561606 None:intergenic 40.0%
! ACCTTTCTAGCAACCATTTC+AGG - chr4_1:39561588-39561607 None:intergenic 40.0%
! TACAACATGCTGAAGTACCA+TGG - chr4_1:39561981-39562000 None:intergenic 40.0%
GAGCAAGTTTGTGATCTCAA+AGG + chr4_1:39562037-39562056 Msa0546970:CDS 40.0%
GCAATCCATCAAAATCATGG+TGG + chr4_1:39562512-39562531 Msa0546970:intron 40.0%
TCAGAAAGCAAACCCCAAAA+TGG - chr4_1:39562630-39562649 None:intergenic 40.0%
TACTGAACAGGAATATCCTC+AGG - chr4_1:39562684-39562703 None:intergenic 40.0%
GAGGATATTCCTGTTCAGTA+TGG + chr4_1:39562684-39562703 Msa0546970:CDS 40.0%
GATATTCCTGTTCAGTATGG+AGG + chr4_1:39562687-39562706 Msa0546970:CDS 40.0%
! TTGCCCAGTGATTTGCAAAA+TGG + chr4_1:39562717-39562736 Msa0546970:CDS 40.0%
! GGACCATTTTGCAAATCACT+GGG - chr4_1:39562723-39562742 None:intergenic 40.0%
!!! TGAACTCAGAAGCTGGTTTT+GGG - chr4_1:39562746-39562765 None:intergenic 40.0%
! TTCTTTTGGCATGATGCAAG+TGG + chr4_1:39562878-39562897 Msa0546970:intron 40.0%
ATACACATGGAAAGCTGATC+TGG + chr4_1:39563259-39563278 Msa0546970:intron 40.0%
!! ACTTGTTGTGGGTGTGAATT+AGG + chr4_1:39563292-39563311 Msa0546970:intron 40.0%
! CTTGTTGTGGGTGTGAATTA+GGG + chr4_1:39563293-39563312 Msa0546970:intron 40.0%
! ACTTGGGATATTGTTGTTGG+AGG + chr4_1:39563329-39563348 Msa0546970:CDS 40.0%
! GAGTTTGTTCCAAATGCTGA+AGG + chr4_1:39563374-39563393 Msa0546970:CDS 40.0%
CTTTCGATGTGAATGAGTTG+TGG - chr4_1:39563457-39563476 None:intergenic 40.0%
ATCCGGCAAAATGATACTCT+CGG + chr4_1:39563478-39563497 Msa0546970:CDS 40.0%
AATGGTGATATCTCAAGTGG+TGG - chr4_1:39563567-39563586 None:intergenic 40.0%
AGTTCTCACGGCAGAAATTA+GGG - chr4_1:39563607-39563626 None:intergenic 40.0%
AAGTTCTCACGGCAGAAATT+AGG - chr4_1:39563608-39563627 None:intergenic 40.0%
TTCTTGTACCCTTTCTCTGA+AGG + chr4_1:39563751-39563770 Msa0546970:three_prime_UTR 40.0%
TCTTGTACCCTTTCTCTGAA+GGG + chr4_1:39563752-39563771 Msa0546970:three_prime_UTR 40.0%
AATGAGACCCTTCAGAGAAA+GGG - chr4_1:39563762-39563781 None:intergenic 40.0%
AAATGAGACCCTTCAGAGAA+AGG - chr4_1:39563763-39563782 None:intergenic 40.0%
ATGAGAACAATGTTGGCACT+TGG + chr4_1:39563865-39563884 Msa0546970:three_prime_UTR 40.0%
GGTCACAACAAACAGTAACA+TGG - chr4_1:39563953-39563972 None:intergenic 40.0%
!!! GTTTGTTGTGACCTTTTTGG+TGG + chr4_1:39563960-39563979 Msa0546970:three_prime_UTR 40.0%
!!! TGACCTTTTTGGTGGGTTTT+TGG + chr4_1:39563968-39563987 Msa0546970:three_prime_UTR 40.0%
!!! GACCTTTTTGGTGGGTTTTT+GGG + chr4_1:39563969-39563988 Msa0546970:three_prime_UTR 40.0%
TGCAAGTTGCAAACTACAGA+AGG + chr4_1:39564011-39564030 Msa0546970:three_prime_UTR 40.0%
GCAAGTTGCAAACTACAGAA+GGG + chr4_1:39564012-39564031 Msa0546970:three_prime_UTR 40.0%
CAAATGGGTCGGTGATTCTA+TGG - chr4_1:39560735-39560754 None:intergenic 45.0%
CCACATGGAAACTTCACCAT+TGG - chr4_1:39561094-39561113 None:intergenic 45.0%
CCAATGGTGAAGTTTCCATG+TGG + chr4_1:39561091-39561110 Msa0546970:CDS 45.0%
CCCTGAAATGGTTGCTAGAA+AGG + chr4_1:39561584-39561603 Msa0546970:CDS 45.0%
! GTCATTCTTTTGCCTGCAGT+TGG + chr4_1:39562308-39562327 Msa0546970:intron 45.0%
AAAGTGGTATTGCCAACTGC+AGG - chr4_1:39562323-39562342 None:intergenic 45.0%
CAACACAATCAGTACATCGG+TGG - chr4_1:39562464-39562483 None:intergenic 45.0%
GCTCAGATTCATTAGACCTG+AGG + chr4_1:39562665-39562684 Msa0546970:intron 45.0%
! GGGACCATTTTGCAAATCAC+TGG - chr4_1:39562724-39562743 None:intergenic 45.0%
!!! AACTCAGAAGCTGGTTTTGG+GGG - chr4_1:39562744-39562763 None:intergenic 45.0%
!!! GAACTCAGAAGCTGGTTTTG+GGG - chr4_1:39562745-39562764 None:intergenic 45.0%
!! GTGAACTCAGAAGCTGGTTT+TGG - chr4_1:39562747-39562766 None:intergenic 45.0%
TTGACAGTGAACTCAGAAGC+TGG - chr4_1:39562753-39562772 None:intergenic 45.0%
GCTTCTGAGTTCACTGTCAA+AGG + chr4_1:39562753-39562772 Msa0546970:CDS 45.0%
TCTGAGTTCACTGTCAAAGG+AGG + chr4_1:39562756-39562775 Msa0546970:CDS 45.0%
CTGAGTTCACTGTCAAAGGA+GGG + chr4_1:39562757-39562776 Msa0546970:CDS 45.0%
TGAGTTCACTGTCAAAGGAG+GGG + chr4_1:39562758-39562777 Msa0546970:CDS 45.0%
! GGATATTGTTGTTGGAGGCT+GGG + chr4_1:39563334-39563353 Msa0546970:CDS 45.0%
GTGTAGCTACCTTCAGCATT+TGG - chr4_1:39563386-39563405 None:intergenic 45.0%
GTTGAGAAGCCAAGGAAGAT+TGG + chr4_1:39563413-39563432 Msa0546970:CDS 45.0%
! GTTGTGGATTGCTTCTTCTG+AGG - chr4_1:39563441-39563460 None:intergenic 45.0%
!!! CACCGAGAGTATCATTTTGC+CGG - chr4_1:39563483-39563502 None:intergenic 45.0%
AAGGTCACGACAAGTTCTCA+CGG - chr4_1:39563619-39563638 None:intergenic 45.0%
CATGATAGCCAAACTCACGT+AGG - chr4_1:39563651-39563670 None:intergenic 45.0%
CTACGTGAGTTTGGCTATCA+TGG + chr4_1:39563649-39563668 Msa0546970:three_prime_UTR 45.0%
AGTTTGGCTATCATGGTGTC+CGG + chr4_1:39563656-39563675 Msa0546970:three_prime_UTR 45.0%
! TTGTTTTCAAACACACGCGG+AGG + chr4_1:39563688-39563707 Msa0546970:three_prime_UTR 45.0%
GTCCCAAAAACCCACCAAAA+AGG - chr4_1:39563974-39563993 None:intergenic 45.0%
!!! TTTGGTGGGTTTTTGGGACA+AGG + chr4_1:39563975-39563994 Msa0546970:three_prime_UTR 45.0%
ACAGAAGGGTGACTTTGTGA+AGG + chr4_1:39564026-39564045 Msa0546970:three_prime_UTR 45.0%
!!! AATTTTTAAACTTATTTATT+AGG + chr4_1:39562947-39562966 Msa0546970:intron 5.0%
!!! TTTAAAGAAATATTTTAATT+TGG + chr4_1:39563186-39563205 Msa0546970:intron 5.0%
AAGGAGAGGAATACCCCACA+TGG - chr4_1:39561109-39561128 None:intergenic 50.0%
! ATGTGGGGTATTCCTCTCCT+TGG + chr4_1:39561108-39561127 Msa0546970:CDS 50.0%
CTATCATCTCCACCAAGGAG+AGG - chr4_1:39561123-39561142 None:intergenic 50.0%
CAGCTCTATCATCTCCACCA+AGG - chr4_1:39561128-39561147 None:intergenic 50.0%
!! GGTGGTCATTGACTCGAGAT+CGG - chr4_1:39562446-39562465 None:intergenic 50.0%
CTCAACCCTCCATACTGAAC+AGG - chr4_1:39562696-39562715 None:intergenic 50.0%
GTTGTGGGTGTGAATTAGGG+AGG + chr4_1:39563296-39563315 Msa0546970:intron 50.0%
! AGGGAGGTGCAACTATCACT+TGG + chr4_1:39563312-39563331 Msa0546970:intron 50.0%
! GGGAGGTGCAACTATCACTT+GGG + chr4_1:39563313-39563332 Msa0546970:intron 50.0%
! GGGATATTGTTGTTGGAGGC+TGG + chr4_1:39563333-39563352 Msa0546970:CDS 50.0%
CCTTGGCTTCTCAACTGCTA+TGG - chr4_1:39563408-39563427 None:intergenic 50.0%
CCATAGCAGTTGAGAAGCCA+AGG + chr4_1:39563405-39563424 Msa0546970:CDS 50.0%
! TCTGAGGCTCCAATCTTCCT+TGG - chr4_1:39563425-39563444 None:intergenic 50.0%
CGGCAAAATGATACTCTCGG+TGG + chr4_1:39563481-39563500 Msa0546970:CDS 50.0%
!! CTCAAGTGGTGGCGCATTTT+CGG - chr4_1:39563556-39563575 None:intergenic 50.0%
GAGAACTTGTCGTGACCTTG+AGG + chr4_1:39563620-39563639 Msa0546970:three_prime_UTR 50.0%
! TGGGGTATTCCTCTCCTTGG+TGG + chr4_1:39561111-39561130 Msa0546970:CDS 55.0%
AGGTTGCGCCTACGTGAGTT+TGG + chr4_1:39563640-39563659 Msa0546970:three_prime_UTR 55.0%
CGGTGGACAACACTGCCTCA+AGG + chr4_1:39563498-39563517 Msa0546970:CDS 60.0%
CTCACGTAGGCGCAACCTCA+AGG - chr4_1:39563638-39563657 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 39560631 39564170 39560631 ID=Msa0546970;Name=Msa0546970
chr4_1 mRNA 39560631 39564170 39560631 ID=Msa0546970-mRNA-1;Parent=Msa0546970;Name=Msa0546970-mRNA-1;_AED=0.03;_eAED=0.03;_QI=150|1|1|1|1|1|4|596|450
chr4_1 exon 39560631 39561605 39560631 ID=Msa0546970-mRNA-1:exon:10026;Parent=Msa0546970-mRNA-1
chr4_1 exon 39561963 39562087 39561963 ID=Msa0546970-mRNA-1:exon:10027;Parent=Msa0546970-mRNA-1
chr4_1 exon 39562671 39562812 39562671 ID=Msa0546970-mRNA-1:exon:10028;Parent=Msa0546970-mRNA-1
chr4_1 exon 39563314 39564170 39563314 ID=Msa0546970-mRNA-1:exon:10029;Parent=Msa0546970-mRNA-1
chr4_1 five_prime_UTR 39560631 39560780 39560631 ID=Msa0546970-mRNA-1:five_prime_utr;Parent=Msa0546970-mRNA-1
chr4_1 CDS 39560781 39561605 39560781 ID=Msa0546970-mRNA-1:cds;Parent=Msa0546970-mRNA-1
chr4_1 CDS 39561963 39562087 39561963 ID=Msa0546970-mRNA-1:cds;Parent=Msa0546970-mRNA-1
chr4_1 CDS 39562671 39562812 39562671 ID=Msa0546970-mRNA-1:cds;Parent=Msa0546970-mRNA-1
chr4_1 CDS 39563314 39563574 39563314 ID=Msa0546970-mRNA-1:cds;Parent=Msa0546970-mRNA-1
chr4_1 three_prime_UTR 39563575 39564170 39563575 ID=Msa0546970-mRNA-1:three_prime_utr;Parent=Msa0546970-mRNA-1
Gene Sequence

>Msa0546970

ATGCAAAGATTTCATCTGGGTTTCTCTCAAAATCCAAACTTGATGATGGATTCTTCTTCATTATCTCCTCTGTCTCTTCAAACCCAAAAATCACCTTTTCAAAACGTACCTGAAGAATCCTCACCAAAACAAACCAAAAAAAGCTTACTTTCATCTCTAATGGGTACTAACAACAACACTTCTTCTACTCTTAGAACCCCTTCTTTTGAAGAAGATAACTACTTTGTTACCCTTCTCAAATCCTCAGAGAAAAAAGCACTTCAAGACCTCAAAAAAAACCTCCTTGAAGTCACAAATGAAAAAAACTCTCCCAATGGTGAAGTTTCCATGTGGGGTATTCCTCTCCTTGGTGGAGATGATAGAGCTGATGTAATACTCTTGAAGTTTCTTAGAGCAAGAGATTTCAGAGTTAATGAAGCATTAAACATGATTACAAAGTGTTTAGCTTGGAGAAAAGAGTTTAATGCTGACACAATAGTTGAAGAAGATTTGAGTCAGTTCAAAGAGCTTGAACGTGTTATAGCTTATATGCAAGGCTATGACAAAGAGGGTCATCCTGTTTGTTACAATGCTTATGGTTTGTTTAGAGATAAAGATATGTATGAGAGGATTTTTGGTGATGAAGAGAAGCTTAAGAAGTTTCTTAGATGGAGGGTTCAAGTTCTTGAAAGAGGTATTAGGCTTCTTCATTTTAAGCCTGGTGGTGTTAATTCTCTTATTCAAGTTACTGATCTTAAAGATATGCCTAAAAGAGAGTTAAGGGTTGCTTCTAACCATATTCTCTCACTCTTTCAAGATAACTACCCTGAAATGGTTGCTAGAAAGATTTTCATCAATGTGCCATGGTACTTCAGCATGTTGTATTCAATGTTTAGTCCATTTTTGACACAAAGGACTAAGAGCAAGTTTGTGATCTCAAAGGAAGGAAATGCTGCTGAGACACTCTACAAATTCATTAGACCTGAGGATATTCCTGTTCAGTATGGAGGGTTGAGTTTGCCCAGTGATTTGCAAAATGGTCCCCCAAAACCAGCTTCTGAGTTCACTGTCAAAGGAGGGGAGAAAGTGAATATACAAATAGAAGGAATTGAGGGAGGTGCAACTATCACTTGGGATATTGTTGTTGGAGGCTGGGACTTAGAATACAGTGCTGAGTTTGTTCCAAATGCTGAAGGTAGCTACACCATAGCAGTTGAGAAGCCAAGGAAGATTGGAGCCTCAGAAGAAGCAATCCACAACTCATTCACATCGAAAGAATCCGGCAAAATGATACTCTCGGTGGACAACACTGCCTCAAGGAAGAAAAAAGTTGCTGCATATCGTTATGTTGTCCGAAAATGCGCCACCACTTGA
Protein sequence

>Msa0546970

MQRFHLGFSQNPNLMMDSSSLSPLSLQTQKSPFQNVPEESSPKQTKKSLLSSLMGTNNNTSSTLRTPSFEEDNYFVTLLKSSEKKALQDLKKNLLEVTNEKNSPNGEVSMWGIPLLGGDDRADVILLKFLRARDFRVNEALNMITKCLAWRKEFNADTIVEEDLSQFKELERVIAYMQGYDKEGHPVCYNAYGLFRDKDMYERIFGDEEKLKKFLRWRVQVLERGIRLLHFKPGGVNSLIQVTDLKDMPKRELRVASNHILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPEDIPVQYGGLSLPSDLQNGPPKPASEFTVKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKIGASEEAIHNSFTSKESGKMILSVDNTASRKKKVAAYRYVVRKCATT*