AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0552980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0552980 MtrunA17_Chr4g0038551 94.383 2065 85 1 1 2034 1 2065 0.0 3984
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0552980 AT4G30150.1 35.752 2067 1091 45 36 2034 112 2009 0.0 1102
Msa0552980 AT4G30150.2 35.752 2067 1091 45 36 2034 72 1969 0.0 1101

Find 376 sgRNAs with CRISPR-Local

Find 620 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATGAAAATTTGGATTTA+TGG 0.073503 4_1:-49770459 Msa0552980:CDS
CATTGCTATAGCTTTCTTTC+TGG 0.095319 4_1:+49770000 None:intergenic
TTCAACATCACTGCCAATTT+TGG 0.159178 4_1:+49765656 None:intergenic
GAGAAGATTTGGTGAATTTA+TGG 0.168885 4_1:-49769442 Msa0552980:CDS
ATTGAAGTGTTTAACCTTAA+TGG 0.175717 4_1:-49766168 Msa0552980:CDS
CGCTTTGCACAATGCTAAAA+TGG 0.185578 4_1:+49769046 None:intergenic
TAAAGCACTGCAAAAGATTT+TGG 0.187122 4_1:+49767459 None:intergenic
GACTGTAGAGATTAACTATT+TGG 0.198454 4_1:+49769327 None:intergenic
AATATCGACAGAAGTATTAT+TGG 0.201356 4_1:+49769838 None:intergenic
CCTTCTAATACCACTTCTTT+TGG 0.213566 4_1:+49762791 None:intergenic
GTCCAGCAGCCTCTTCCTTC+AGG 0.215265 4_1:+49768082 None:intergenic
AGATTGGCTTCTCAAAATTC+TGG 0.215269 4_1:+49765814 None:intergenic
GAAATTGAGTATGAAGTTAT+TGG 0.217511 4_1:-49769464 Msa0552980:CDS
GAAAATATTAGTGATTTAAA+TGG 0.219011 4_1:+49766371 None:intergenic
AATCCCCGTCTATTGGTTTA+AGG 0.220186 4_1:-49762016 Msa0552980:three_prime_UTR
ATTGATATTGTGTCCAAAAT+TGG 0.223791 4_1:-49765669 Msa0552980:CDS
CAGAGCCCACATATATTTAA+TGG 0.226377 4_1:-49764182 Msa0552980:CDS
TTTCAAATTGTCAGCCATTA+AGG 0.230407 4_1:+49766154 None:intergenic
TTAATGGAAGTGATCCTATT+TGG 0.238227 4_1:-49770216 Msa0552980:CDS
TCAAAATTCTATCTAAAGTA+TGG 0.245737 4_1:-49768234 Msa0552980:CDS
AACCCACTCACTTGCCCTTC+TGG 0.250464 4_1:+49768870 None:intergenic
GTGCAAAGGTTTAGTTTCTT+TGG 0.257750 4_1:-49767989 Msa0552980:CDS
GGTTTATATATTTCAGTCTA+TGG 0.263651 4_1:-49768190 Msa0552980:CDS
CCCCAGTCTTTCTTCCCATT+TGG 0.267667 4_1:+49770766 None:intergenic
GAATTCTTTCAACTGCTTCT+TGG 0.268890 4_1:+49767852 None:intergenic
TGAATTACAAAACAGTTAAC+TGG 0.275445 4_1:+49767310 None:intergenic
GGCCTTAAGGTATATATTAA+TGG 0.276150 4_1:-49766531 Msa0552980:CDS
TGGGTTGTCAAATGAAAATT+TGG 0.287369 4_1:-49770467 Msa0552980:CDS
GAGTTGCATTGTCGGGTTAA+TGG 0.289996 4_1:-49770232 Msa0552980:CDS
AGTTGCAATGGGCTATCTTT+TGG 0.291440 4_1:-49769486 Msa0552980:CDS
ATGATTATTGAATTTGTTTC+AGG 0.291696 4_1:-49764883 Msa0552980:intron
CAGTTCAAATGTGCAGAAAT+TGG 0.292752 4_1:-49761767 None:intergenic
CTCCGATGATTCTTCTCCTT+TGG 0.294047 4_1:-49768211 Msa0552980:CDS
GATGCAATTTGGAAGGCTTT+TGG 0.299495 4_1:+49771464 None:intergenic
CTCTGCCATCAATTGTAATA+TGG 0.302080 4_1:-49769402 Msa0552980:CDS
AAAACTTTCAAATCCTTTCC+TGG 0.305548 4_1:+49770294 None:intergenic
AGCTTCTATCAGAACCTAAC+TGG 0.308730 4_1:-49767387 Msa0552980:CDS
TTGTTACAAAGCTTGGTAAA+AGG 0.310120 4_1:-49765546 Msa0552980:CDS
GTATCTAGGCAAATAGTATC+TGG 0.313127 4_1:+49768579 None:intergenic
ATATTCTGCCTTTGAGTTGA+TGG 0.313310 4_1:-49768340 Msa0552980:CDS
AACTATTGTGTACCATTATA+AGG 0.313376 4_1:-49763851 Msa0552980:CDS
TCAACAGTTTCTCCTATAAT+AGG 0.313569 4_1:+49768537 None:intergenic
CATAGAATTTCTAAAGCTTC+TGG 0.314917 4_1:-49763987 Msa0552980:CDS
TGAAGTTATTGGAGAAGATT+TGG 0.316091 4_1:-49769453 Msa0552980:CDS
ATTTGCCATATTACAATTGA+TGG 0.316997 4_1:+49769397 None:intergenic
GTAAAACTCTTGACGTTAAG+AGG 0.318463 4_1:+49767229 None:intergenic
ATCTTAAACTTATCTCTGTT+TGG 0.326016 4_1:-49765795 Msa0552980:CDS
TACTGTTCTTCTTAATTGCT+TGG 0.326160 4_1:-49763590 Msa0552980:CDS
AAACAGCAAAAGGATATATT+TGG 0.328486 4_1:-49762870 Msa0552980:CDS
TAAACCAATAGACGGGGATT+TGG 0.330356 4_1:+49762019 None:intergenic
ACCTGAATGCTCAGTTTCTA+AGG 0.331942 4_1:-49765757 Msa0552980:CDS
AAATTAATTTCATAACAAAA+AGG 0.335963 4_1:+49768256 None:intergenic
TCTGCAGTTTCGTGCTTTAG+TGG 0.336863 4_1:-49766035 Msa0552980:CDS
GCCTTAGAAACTGAGCATTC+AGG 0.337800 4_1:+49765756 None:intergenic
CTTAGTAAAATAGCTACTTC+AGG 0.339370 4_1:+49765516 None:intergenic
AAACTTCGTTGCCAGTCTTT+TGG 0.339651 4_1:-49765610 Msa0552980:CDS
AAATGAAAATTTGGATTTAT+GGG 0.345524 4_1:-49770458 Msa0552980:CDS
GAAACGACTGGGGCAGTGCT+TGG 0.346301 4_1:-49770433 Msa0552980:CDS
ATGATATATCTGAAACTCTT+AGG 0.346955 4_1:-49768830 Msa0552980:CDS
AAACTCTACAATGGTCGATT+TGG 0.348553 4_1:-49771542 None:intergenic
CTTTCAAATCCTTTCCTGGC+TGG 0.352730 4_1:+49770298 None:intergenic
ACCAATCTCCCTGTCCAAAT+AGG 0.354487 4_1:+49770202 None:intergenic
TGAGGTTGTTTGTCTCTTGC+CGG 0.354654 4_1:-49766556 Msa0552980:CDS
TCTTCAACTATTCCTGCATT+GGG 0.354928 4_1:-49769353 Msa0552980:CDS
ATATTCCATGGCTTTATAGA+TGG 0.356038 4_1:+49768896 None:intergenic
TGATTCCATTTGTTGATTTG+AGG 0.357586 4_1:+49767964 None:intergenic
GTTGACAACATGCAACAAAT+AGG 0.361703 4_1:+49763871 None:intergenic
TGACGGAGTTGAGGCATATA+TGG 0.362356 4_1:-49770722 Msa0552980:CDS
AACAGAGATAAGTTTAAGAT+TGG 0.365608 4_1:+49765798 None:intergenic
GCCTTAAGGTATATATTAAT+GGG 0.369043 4_1:-49766530 Msa0552980:CDS
TTTAAAATGTTCTTCTGAAC+TGG 0.370217 4_1:+49770558 None:intergenic
CTTAAGAACTCAACCCAGTT+AGG 0.372084 4_1:+49767373 None:intergenic
CAAATTCACATGAGGGCAAT+AGG 0.372966 4_1:-49765237 Msa0552980:CDS
AGAGATGATTGTACCTTTCA+AGG 0.373516 4_1:+49767119 None:intergenic
GGATGATTCCCCGGTGCCAT+TGG 0.377748 4_1:-49765583 Msa0552980:CDS
TCCTATTTGGACAGGGAGAT+TGG 0.379316 4_1:-49770203 Msa0552980:CDS
AAACTTGCCTGTTTCTCAAA+AGG 0.382844 4_1:-49766120 Msa0552980:CDS
TAAACCTTTGTTACAAAGCT+TGG 0.385069 4_1:-49765553 Msa0552980:CDS
TGTCGGGTGAGTTGCATTGT+CGG 0.386312 4_1:-49770240 Msa0552980:CDS
CCTTGGGCGATGCCTTATAA+TGG 0.386417 4_1:+49763839 None:intergenic
ATATCGGTATATTCAGGATA+TGG 0.387235 4_1:-49762816 Msa0552980:CDS
CTGATATTCACTCGCTCTGC+TGG 0.387960 4_1:+49763921 None:intergenic
GGCAGCTGGCATTGATTGCT+TGG 0.389283 4_1:-49764908 Msa0552980:CDS
CTGGGTATCATGTAAACTTT+CGG 0.389365 4_1:+49765833 None:intergenic
TTTACCAAATCCCCGTCTAT+TGG 0.392299 4_1:-49762023 Msa0552980:three_prime_UTR
ATCTTCAACTATTCCTGCAT+TGG 0.393099 4_1:-49769354 Msa0552980:CDS
GATGATTCCCCGGTGCCATT+GGG 0.394283 4_1:-49765582 Msa0552980:CDS
CAGTCTTTCTTCCCATTTGG+AGG 0.395106 4_1:+49770769 None:intergenic
TGTGGTATACTGAAGTCTAT+TGG 0.395198 4_1:-49769707 Msa0552980:CDS
CAAATCCTTTCCTGGCTGGA+TGG 0.396358 4_1:+49770302 None:intergenic
TGGTCCATCAGATTCATTCA+TGG 0.396862 4_1:-49763967 Msa0552980:CDS
GTGGGGCCTAACATCTTCGC+TGG 0.397596 4_1:-49766006 Msa0552980:CDS
GCTATTGCCTTCAGTTATAG+TGG 0.398943 4_1:+49768692 None:intergenic
TGCTAGGTTATCTTAATGAT+TGG 0.398968 4_1:-49770810 Msa0552980:CDS
TCTTCAGAGGCTTGTTGACT+TGG 0.400178 4_1:-49768166 Msa0552980:CDS
AACTACATATCGGTATATTC+AGG 0.400547 4_1:-49762822 Msa0552980:CDS
AGAGTCGGAACGATGCAATT+TGG 0.401194 4_1:+49771453 None:intergenic
ATATATACCTTAAGGCCTTC+CGG 0.401772 4_1:+49766537 None:intergenic
CCAAAAGAAGTGGTATTAGA+AGG 0.405421 4_1:-49762791 Msa0552980:intron
GTGCTTTAGTGGAGTCTTGT+GGG 0.405709 4_1:-49766024 Msa0552980:CDS
GATTGGCTTCTCAAAATTCT+GGG 0.408839 4_1:+49765815 None:intergenic
ACTTGACTGTCTTTCATGTA+AGG 0.409745 4_1:+49765176 None:intergenic
TCTCTACAGTCAACTTCGTC+AGG 0.409773 4_1:-49769315 Msa0552980:intron
TAATCTGCAGGCAGAACTCT+TGG 0.410102 4_1:-49768757 Msa0552980:CDS
TCTCTTGCCGGAAGGCCTTA+AGG 0.411934 4_1:-49766544 Msa0552980:CDS
CTCCAAATGGGAAGAAAGAC+TGG 0.412065 4_1:-49770768 Msa0552980:CDS
TCCAGCAGCCTCTTCCTTCA+GGG 0.412248 4_1:+49768083 None:intergenic
CTTGTTAGCTGTATCGTAGT+TGG 0.413325 4_1:+49769550 None:intergenic
GTATCTGGGCATATAGTATC+TGG 0.413796 4_1:+49768594 None:intergenic
CGCTCTTGATTGTGTTTCGT+TGG 0.417438 4_1:-49770506 Msa0552980:CDS
AAACGACTGGGGCAGTGCTT+GGG 0.417528 4_1:-49770432 Msa0552980:CDS
CATATATGGATCTTCGTTGT+TGG 0.419429 4_1:-49770708 Msa0552980:CDS
CAGGCTTCTTGTAAATGCCT+TGG 0.421981 4_1:-49766624 Msa0552980:CDS
CAAATAGGTTAACTGTGAAT+TGG 0.422156 4_1:+49763886 None:intergenic
TGAGCCATTGCTGCATTTGT+CGG 0.423909 4_1:-49770257 Msa0552980:CDS
TAACAGCCTTTCAACTGATT+CGG 0.427408 4_1:+49768941 None:intergenic
GTCGGGTGAGTTGCATTGTC+GGG 0.427634 4_1:-49770239 Msa0552980:CDS
TCCCATTAATATATACCTTA+AGG 0.427724 4_1:+49766529 None:intergenic
GACTGCTCTCCATTGGTTGA+TGG 0.428505 4_1:-49768798 Msa0552980:CDS
GGAACTTTAGTTTCGTATGA+AGG 0.429807 4_1:-49769923 Msa0552980:CDS
ACAAAATTGAATCACTTAGA+AGG 0.429865 4_1:+49767713 None:intergenic
ACTATTATTGTGAATATTTG+AGG 0.430994 4_1:-49766574 Msa0552980:CDS
GTCACGGCTACTCCCGATCC+AGG 0.432269 4_1:-49764140 Msa0552980:CDS
GCTATAGCAATGGGTAGCTT+AGG 0.432617 4_1:-49769989 Msa0552980:CDS
ATGCCTCAACTCCGTCAAGC+TGG 0.432782 4_1:+49770728 None:intergenic
AAAACTTGCAAATAGTATCT+AGG 0.434098 4_1:+49768565 None:intergenic
AGGGAGATTGGTGAAGGTGG+TGG 0.434458 4_1:-49770191 Msa0552980:CDS
ATTCGTTGCCGATAGCCATT+TGG 0.439209 4_1:-49767918 Msa0552980:CDS
AAACTCAATTTCAAATATGA+AGG 0.440148 4_1:-49762243 Msa0552980:CDS
TTACCATCTACAGAATTTCA+AGG 0.443088 4_1:+49762210 None:intergenic
AAGATAGGAGATTAAGCAAC+TGG 0.443692 4_1:+49767197 None:intergenic
AAGTCATTATCTGTGATTGT+TGG 0.450978 4_1:-49766425 Msa0552980:CDS
TACTCTATTCTCGATGGATG+TGG 0.451152 4_1:-49764066 Msa0552980:CDS
TTGCTTGCCTAAGCAAGCTT+CGG 0.453680 4_1:+49768424 None:intergenic
TTTGACCCAGCGAAGATGTT+AGG 0.454665 4_1:+49766000 None:intergenic
AAGCTACCATTAAATATATG+TGG 0.455114 4_1:+49764176 None:intergenic
ACACTTCAATTCCTCGAGCT+TGG 0.459302 4_1:+49766181 None:intergenic
ATATATGGATCTTCGTTGTT+GGG 0.460318 4_1:-49770707 Msa0552980:CDS
CCCTTCTGGAATATATTCCA+TGG 0.460490 4_1:+49768884 None:intergenic
CTACTAGTTCCTCCTGGCAC+TGG 0.460772 4_1:+49769863 None:intergenic
GCATTCATTTCAAGCAAAAG+AGG 0.461955 4_1:+49769776 None:intergenic
TCGTTGGTGTTCTCCTCTCA+TGG 0.463063 4_1:-49770490 Msa0552980:CDS
TCTTTGTTTCTGATGATGTA+AGG 0.463858 4_1:-49768011 Msa0552980:CDS
GTGGAAGAAGTTCTTTCTCA+TGG 0.464104 4_1:-49770172 Msa0552980:CDS
GATGCAGATAAAACAGCAAA+AGG 0.464687 4_1:-49762880 Msa0552980:intron
ATACAGTCAACTAGAATGTC+TGG 0.465406 4_1:+49767775 None:intergenic
TTGACAAGCGAGGAGGCATA+AGG 0.466177 4_1:+49768397 None:intergenic
CGTGCTTTAGTGGAGTCTTG+TGG 0.467219 4_1:-49766025 Msa0552980:CDS
TGGCTCCTCAAATCAACAAA+TGG 0.467331 4_1:-49767969 Msa0552980:CDS
TTAAGATAACCTAGCAGTCT+TGG 0.467560 4_1:+49770817 None:intergenic
CAAATCAACAAATGGAATCA+AGG 0.469741 4_1:-49767961 Msa0552980:CDS
ATTTCGACACTTGTGGCAGC+TGG 0.471530 4_1:-49764922 Msa0552980:CDS
AACTTGCCTGTTTCTCAAAA+GGG 0.472238 4_1:-49766119 Msa0552980:CDS
GGAAGTGATCCTATTTGGAC+AGG 0.477696 4_1:-49770211 Msa0552980:CDS
TATAGGAGAAACTGTTGATC+GGG 0.478964 4_1:-49768532 Msa0552980:CDS
TCTAAGGCTAATAGCTCAGC+TGG 0.479993 4_1:-49765741 Msa0552980:CDS
TGCCTCAACTCCGTCAAGCT+GGG 0.480906 4_1:+49770729 None:intergenic
TTGCCTAAGCAAGCTTCGGC+TGG 0.481928 4_1:+49768428 None:intergenic
CTGACAGTGGTTTCTTCTCG+TGG 0.483199 4_1:-49768302 Msa0552980:CDS
GAGCCATTGCTGCATTTGTC+GGG 0.483708 4_1:-49770256 Msa0552980:CDS
CAAGTCTGGCGAGGATTGAA+TGG 0.484610 4_1:+49766487 None:intergenic
TTTGCAGAGATTTGACCAAA+TGG 0.485150 4_1:+49767903 None:intergenic
CATTCAATCCTCGCCAGACT+TGG 0.486247 4_1:-49766486 Msa0552980:CDS
TTATTCAAACCCAATGGCAC+CGG 0.486892 4_1:+49765573 None:intergenic
TTTGGCTACGGATGATTCCC+CGG 0.486958 4_1:-49765592 Msa0552980:CDS
ATTTGGTAAAACGGCCACCC+TGG 0.488404 4_1:+49762036 None:intergenic
GCTGAAGCACCAACCACAAA+AGG 0.488443 4_1:+49770347 None:intergenic
CTCGATGGATGTGGGGCATG+TGG 0.488596 4_1:-49764057 Msa0552980:CDS
GACTTCGAAAGCCACAAAAC+AGG 0.491588 4_1:+49766443 None:intergenic
GTTATTAGAATTTACAGAGA+TGG 0.492463 4_1:-49765385 Msa0552980:CDS
GCTTGAATGAATTGAAAACT+AGG 0.492619 4_1:-49765092 Msa0552980:CDS
GATTTATGGGTTGAAACGAC+TGG 0.494008 4_1:-49770445 Msa0552980:CDS
GTGAAAACAGAGGACACATC+TGG 0.495699 4_1:-49769647 Msa0552980:CDS
AAGGAGGGAAGCAGAAGGTT+GGG 0.495939 4_1:+49768275 None:intergenic
CAAACAGATGCTAAAGATAG+TGG 0.497105 4_1:-49765981 Msa0552980:CDS
GAAACTGTTGATCGGGCTGT+TGG 0.498223 4_1:-49768525 Msa0552980:CDS
TTACATCCGACATCAAAGAT+AGG 0.498961 4_1:+49767182 None:intergenic
AGAATGGCTGACCCTGGATC+GGG 0.499208 4_1:+49764128 None:intergenic
ACTATTTGGCACCCCAATGC+AGG 0.500003 4_1:+49769341 None:intergenic
TGATTCCGCAAGAAAGTTCA+AGG 0.500369 4_1:-49769945 Msa0552980:CDS
AGAAAGAAAGCTATAGCAAT+GGG 0.500843 4_1:-49769998 Msa0552980:CDS
TATTCAAACCCAATGGCACC+GGG 0.500930 4_1:+49765574 None:intergenic
TTAGAATTTACAGAGATGGT+TGG 0.501021 4_1:-49765381 Msa0552980:CDS
AACGAGACGTTAGTTGCAAT+GGG 0.502961 4_1:-49769497 Msa0552980:CDS
TCAACTGCTTCTTGGAACCA+TGG 0.504030 4_1:+49767860 None:intergenic
TGACCTTGAAATTCTGTAGA+TGG 0.504811 4_1:-49762213 Msa0552980:three_prime_UTR
AGTACAAAGACACTGCATAA+AGG 0.505137 4_1:-49765156 Msa0552980:CDS
TTTGTCTACTATAGAGGCCG+TGG 0.507572 4_1:-49765019 Msa0552980:CDS
AAAGAAACGCAGATTGTTGT+GGG 0.507704 4_1:+49765355 None:intergenic
TGTTGATCGGGCTGTTGGAA+AGG 0.507914 4_1:-49768520 Msa0552980:CDS
AATAGATGAAGCTTTAAGAC+CGG 0.508825 4_1:-49762457 Msa0552980:CDS
GCATTACAAATCACGAATCA+AGG 0.509642 4_1:-49768106 Msa0552980:CDS
TAACGAGACGTTAGTTGCAA+TGG 0.509724 4_1:-49769498 Msa0552980:CDS
ACATTAAGTTATCAATCTCA+TGG 0.512518 4_1:+49762146 None:intergenic
ACTCTATTCTCGATGGATGT+GGG 0.512905 4_1:-49764065 Msa0552980:CDS
GATTTAAAGCAACCAGTGCC+AGG 0.513633 4_1:-49769875 Msa0552980:CDS
AAAGGAGGGAAGCAGAAGGT+TGG 0.514110 4_1:+49768274 None:intergenic
AATATCAATTGCTGATGAAG+TGG 0.514938 4_1:+49765683 None:intergenic
CACTTCAACACACATGAGAA+TGG 0.515639 4_1:+49764112 None:intergenic
CGACAAGTGCTGAGTTGTCG+AGG 0.516847 4_1:+49767347 None:intergenic
GACAGGGAGATTGGTGAAGG+TGG 0.517063 4_1:-49770194 Msa0552980:CDS
TGTGAGATTTCAATAAAAGC+AGG 0.517374 4_1:+49765414 None:intergenic
CATTGGTTGATGGAAACAAA+TGG 0.519799 4_1:-49768788 Msa0552980:CDS
AGTCTTTCTTCCCATTTGGA+GGG 0.520207 4_1:+49770770 None:intergenic
GAAAACAAAGATCCATTGAC+TGG 0.520792 4_1:+49768470 None:intergenic
CAGGCAGAACTCTTGGGTAG+AGG 0.521499 4_1:-49768750 Msa0552980:CDS
GATGAAAGACTGCTCTCCAT+TGG 0.522122 4_1:-49768805 Msa0552980:CDS
ACATCATCAGAAACAAAGAC+TGG 0.522280 4_1:+49768015 None:intergenic
GCCCTGAAGGAAGAGGCTGC+TGG 0.522560 4_1:-49768084 Msa0552980:CDS
AATAAATCCATTGTGAATGA+AGG 0.523092 4_1:-49763553 Msa0552980:CDS
AACTGCTTGATACACAATGA+AGG 0.525348 4_1:+49767806 None:intergenic
CTAGCGCCATTGAAATCACT+AGG 0.525560 4_1:-49761968 Msa0552980:three_prime_UTR
GAGAATGGCTGACCCTGGAT+CGG 0.526165 4_1:+49764127 None:intergenic
ATGGCGAAAGATTAATCTGC+AGG 0.527982 4_1:-49768769 Msa0552980:CDS
GTTGTTTGTCTCTTGCCGGA+AGG 0.527994 4_1:-49766552 Msa0552980:CDS
AGGCAGAACTCTTGGGTAGA+GGG 0.529422 4_1:-49768749 Msa0552980:CDS
GTTGATCGGGCTGTTGGAAA+GGG 0.530471 4_1:-49768519 Msa0552980:CDS
TAAAACTCTTGACGTTAAGA+GGG 0.531191 4_1:+49767230 None:intergenic
TGTATAAACTTTACTTGATG+AGG 0.531218 4_1:+49765269 None:intergenic
TTCTTCTGAACTGGTAGAGA+AGG 0.532490 4_1:+49770567 None:intergenic
CCCTACTTGAGTATTCTAGT+TGG 0.532942 4_1:-49768624 Msa0552980:CDS
TCTTCCTTAAACCAATAGAC+GGG 0.536049 4_1:+49762012 None:intergenic
GAAGGCAATAGCAATCTTGT+CGG 0.536380 4_1:-49768681 Msa0552980:CDS
TTTACCAAGCTTTGTAACAA+AGG 0.537636 4_1:+49765549 None:intergenic
TGGTGTTCTCCTCTCATGGT+GGG 0.538143 4_1:-49770486 Msa0552980:CDS
ATTTATGGGTTGAAACGACT+GGG 0.540765 4_1:-49770444 Msa0552980:CDS
TTTATTCCGAATCAGTTGAA+AGG 0.542416 4_1:-49768947 Msa0552980:CDS
AATGTTTCAACTCATAGTCA+TGG 0.543404 4_1:-49762128 Msa0552980:three_prime_UTR
CAGTAACAGAAGCTTCAAGA+TGG 0.544050 4_1:+49763608 None:intergenic
TTTGGTAAAACGGCCACCCT+GGG 0.544267 4_1:+49762037 None:intergenic
GAACTTTAGTTTCGTATGAA+GGG 0.545963 4_1:-49769922 Msa0552980:CDS
AATCAAGGCCCTGAAGGAAG+AGG 0.546769 4_1:-49768091 Msa0552980:CDS
TAGCATTGTGCAAAGCGCTA+AGG 0.547165 4_1:-49769040 Msa0552980:CDS
TAGACGGGGATTTGGTAAAA+CGG 0.547453 4_1:+49762027 None:intergenic
AAGCACTAAAGAATACAGTC+TGG 0.549555 4_1:+49768722 None:intergenic
TTATAGGAGAAACTGTTGAT+CGG 0.551462 4_1:-49768533 Msa0552980:CDS
AGCACTTGTCGAAAATAAAG+AGG 0.552648 4_1:-49767335 Msa0552980:CDS
GACCGTGTCCCACGTTGACA+TGG 0.553798 4_1:+49766087 None:intergenic
TTTGAGGCTAAATTTGCTGT+CGG 0.555105 4_1:-49765466 Msa0552980:CDS
AATCTGCAGGCAGAACTCTT+GGG 0.555473 4_1:-49768756 Msa0552980:CDS
CACATGAGAATGGCTGACCC+TGG 0.556242 4_1:+49764122 None:intergenic
AGTTCCCTTGAACTTTCTTG+CGG 0.558753 4_1:+49769940 None:intergenic
GCCGTGGAGAGAGCTCTAGT+TGG 0.558849 4_1:-49765003 Msa0552980:CDS
TGCTTTAGTGGAGTCTTGTG+GGG 0.559125 4_1:-49766023 Msa0552980:CDS
TTGGAGCTACTAGTTCCTCC+TGG 0.559652 4_1:+49769857 None:intergenic
AAAAGAAACGCAGATTGTTG+TGG 0.559893 4_1:+49765354 None:intergenic
CTCTATTCTCGATGGATGTG+GGG 0.560219 4_1:-49764064 Msa0552980:CDS
TCGGGCTGTTGGAAAGGGCA+AGG 0.561707 4_1:-49768514 Msa0552980:CDS
ATAAAGAAAGAGTGTTGATG+TGG 0.563000 4_1:-49765956 Msa0552980:CDS
TTCCAGAAGGGCAAGTGAGT+GGG 0.563279 4_1:-49768872 Msa0552980:CDS
AGCTACCATTAAATATATGT+GGG 0.564877 4_1:+49764177 None:intergenic
GCTCTAGTTGGAGTACAAGA+AGG 0.565362 4_1:-49764991 Msa0552980:CDS
ATCATCCGTAGCCAAAAGAC+TGG 0.565762 4_1:+49765599 None:intergenic
CATTTGTTTCCATCAACCAA+TGG 0.566602 4_1:+49768789 None:intergenic
CATCATCAGAAACAAAGACT+GGG 0.566980 4_1:+49768016 None:intergenic
ATACAATTACCAAGACTGCT+AGG 0.567536 4_1:-49770826 Msa0552980:CDS
TAATCTCCTATCTTTGATGT+CGG 0.567881 4_1:-49767188 Msa0552980:CDS
TGCCATGTCAACGTGGGACA+CGG 0.568303 4_1:-49766089 Msa0552980:CDS
TCATATGCCTTGTTGTGCAT+TGG 0.568466 4_1:-49766332 Msa0552980:CDS
CAGAAAGAAAGCTATAGCAA+TGG 0.568832 4_1:-49769999 Msa0552980:CDS
CTTCAACTATTCCTGCATTG+GGG 0.568852 4_1:-49769352 Msa0552980:CDS
ATTGATATTTGGGGAAACCA+TGG 0.570155 4_1:-49767877 Msa0552980:CDS
AATATTCACAATAATAGTCC+CGG 0.571001 4_1:+49766579 None:intergenic
TAAACTTTACTTGATGAGGT+AGG 0.571183 4_1:+49765273 None:intergenic
GCCATGGAATATATTCCAGA+AGG 0.571214 4_1:-49768885 Msa0552980:CDS
TGTCCAGCCGAAGCTTGCTT+AGG 0.572568 4_1:-49768431 Msa0552980:CDS
TATCTAGGCAAATAGTATCT+GGG 0.572578 4_1:+49768580 None:intergenic
GCCCCAGCTTGACGGAGTTG+AGG 0.572704 4_1:-49770731 Msa0552980:CDS
AGGGTCCATCCAGCCAGGAA+AGG 0.572910 4_1:-49770307 Msa0552980:CDS
GGGAAGAAAGACTGGGGCGA+AGG 0.572985 4_1:-49770760 Msa0552980:CDS
TCTGATGATGTAAGGTGCAA+AGG 0.573138 4_1:-49768003 Msa0552980:CDS
AATTTGGTAGGTCCAGTCAA+TGG 0.575075 4_1:-49768482 Msa0552980:CDS
GCTGAACCTAGTGATTTCAA+TGG 0.575640 4_1:+49761962 None:intergenic
GGGTGAAATTTCGACACTTG+TGG 0.577609 4_1:-49764929 Msa0552980:CDS
TCGGAACGATGCAATTTGGA+AGG 0.578033 4_1:+49771457 None:intergenic
CCATTATAAGGCATCGCCCA+AGG 0.579165 4_1:-49763839 Msa0552980:intron
TTGGTGTTCTCCTCTCATGG+TGG 0.579693 4_1:-49770487 Msa0552980:CDS
TGGGGCCTAACATCTTCGCT+GGG 0.579793 4_1:-49766005 Msa0552980:CDS
TTCAGTCTATGGCTCTTCAG+AGG 0.580117 4_1:-49768179 Msa0552980:CDS
AAGTGCTAGCGACAGTCTCA+AGG 0.580746 4_1:-49764094 Msa0552980:CDS
TCGTCACATGAATGAGCGAC+TGG 0.581215 4_1:+49767283 None:intergenic
GTCTTCCTTAAACCAATAGA+CGG 0.582845 4_1:+49762011 None:intergenic
AGATTTGACCAAATGGCTAT+CGG 0.584731 4_1:+49767910 None:intergenic
AACCAAAGGAGAAGAATCAT+CGG 0.585357 4_1:+49768209 None:intergenic
AGCTCTCTCCATCAACTCAA+AGG 0.585970 4_1:+49768332 None:intergenic
CTACGATACAGCTAACAAGA+TGG 0.587118 4_1:-49769546 Msa0552980:CDS
ATTTGACAACCCACCATGAG+AGG 0.587249 4_1:+49770477 None:intergenic
GGCAAGTCTATATTGTTGCA+AGG 0.588210 4_1:-49765216 Msa0552980:CDS
GAAGCATACTCTATTCTCGA+TGG 0.588983 4_1:-49764072 Msa0552980:CDS
TCTTCGTAGAATTTATGAAG+AGG 0.590789 4_1:-49763485 Msa0552980:intron
CATGCAATGTTTCTAAACAA+TGG 0.591520 4_1:+49767421 None:intergenic
ACATTGATAGCTAGTTCCAC+TGG 0.592898 4_1:-49769587 Msa0552980:CDS
AAAGGTTTATTCAAACCCAA+TGG 0.595184 4_1:+49765567 None:intergenic
AAAGCAACCTTCATTCACAA+TGG 0.596003 4_1:+49763546 None:intergenic
TCCAACTAGAATACTCAAGT+AGG 0.596055 4_1:+49768623 None:intergenic
TCCAAATGGGAAGAAAGACT+GGG 0.596910 4_1:-49770767 Msa0552980:CDS
AAAGTGTATGACAAGAACCT+TGG 0.597327 4_1:-49770400 Msa0552980:CDS
ACTGCTTGATACACAATGAA+GGG 0.597649 4_1:+49767807 None:intergenic
GAGACCATGAATGAATCTGA+TGG 0.598208 4_1:+49763963 None:intergenic
ATATATCTGAAACTCTTAGG+TGG 0.598327 4_1:-49768827 Msa0552980:CDS
CTGTGTGGTAATAAAATGAG+AGG 0.598851 4_1:+49762177 None:intergenic
GGGACCTTGCAGAAATACCT+TGG 0.599637 4_1:-49762286 Msa0552980:CDS
TTGGACAGGGAGATTGGTGA+AGG 0.599861 4_1:-49770197 Msa0552980:CDS
AGCAAAAGGATATATTTGGT+CGG 0.600821 4_1:-49762866 Msa0552980:CDS
AAAGCAAATGATTCTCTGCA+TGG 0.601233 4_1:+49766228 None:intergenic
TCACCCGACAAATGCAGCAA+TGG 0.601627 4_1:+49770253 None:intergenic
TACAGCTAACAAGATGGAGA+TGG 0.602685 4_1:-49769540 Msa0552980:CDS
AACTAGATCATCAACACCCA+GGG 0.602784 4_1:-49762053 Msa0552980:three_prime_UTR
ATTCCAGAAGGGCAAGTGAG+TGG 0.603620 4_1:-49768873 Msa0552980:CDS
CACCCACACAACTTCTGCCA+AGG 0.603758 4_1:+49770383 None:intergenic
CTGAGACTTCTGAGCAGAGT+CGG 0.605842 4_1:+49771438 None:intergenic
TGTGATTGTTGGAATTCAAG+AGG 0.606056 4_1:-49766414 Msa0552980:CDS
CCACACCATCTATAAAGCCA+TGG 0.606526 4_1:-49768901 Msa0552980:CDS
AGTAACAGAAGCTTCAAGAT+GGG 0.607230 4_1:+49763609 None:intergenic
GCTTCTATCAGAACCTAACT+GGG 0.607707 4_1:-49767386 Msa0552980:CDS
GGATATGGTCCCAAAAGAAG+TGG 0.608790 4_1:-49762801 Msa0552980:CDS
ATCATGTTGAAGAGTTGCCA+AGG 0.610184 4_1:+49762269 None:intergenic
CCATGGCTTTATAGATGGTG+TGG 0.610200 4_1:+49768901 None:intergenic
ATTAGTACAAATTCACATGA+GGG 0.610597 4_1:-49765244 Msa0552980:CDS
CCAACTAGAATACTCAAGTA+GGG 0.612639 4_1:+49768624 None:intergenic
ATCACGAATCAAGGCCCTGA+AGG 0.613284 4_1:-49768097 Msa0552980:CDS
GACTGAAATATATAAACCAA+AGG 0.613987 4_1:+49768195 None:intergenic
GAAGAATCTACATACTCAGA+AGG 0.614032 4_1:+49766203 None:intergenic
CTTGAGATGTAGAACTGTCA+CGG 0.614239 4_1:-49764156 Msa0552980:CDS
CCATGGAATATATTCCAGAA+GGG 0.614669 4_1:-49768884 Msa0552980:CDS
AATTAGTACAAATTCACATG+AGG 0.615119 4_1:-49765245 Msa0552980:CDS
GCCTCAACTCCGTCAAGCTG+GGG 0.616839 4_1:+49770730 None:intergenic
TCGATGGATGTGGGGCATGT+GGG 0.617530 4_1:-49764056 Msa0552980:CDS
GGCACAAAACTTGAAGTCAA+CGG 0.618669 4_1:+49765435 None:intergenic
GACAAGTGCTGAGTTGTCGA+GGG 0.618829 4_1:+49767348 None:intergenic
ACTTGATGAGGTAGGATCCG+TGG 0.622558 4_1:+49765281 None:intergenic
GATTCAGCCACTATAACTGA+AGG 0.623017 4_1:-49768699 Msa0552980:CDS
GAACCTTGGCAGAAGTTGTG+TGG 0.623856 4_1:-49770386 Msa0552980:CDS
ATGTTTACCAATGCACAACA+AGG 0.626212 4_1:+49766325 None:intergenic
ACTCTTGACGTTAAGAGGGG+AGG 0.627639 4_1:+49767234 None:intergenic
CTTCCTTAAACCAATAGACG+GGG 0.628146 4_1:+49762013 None:intergenic
TGAATTGAAAACTAGGCTGC+GGG 0.628301 4_1:-49765085 Msa0552980:CDS
CATTCAAAGCATATATAGAG+AGG 0.629748 4_1:-49765059 Msa0552980:CDS
CAGAAACAAAGACTGGGGAC+TGG 0.633640 4_1:+49768022 None:intergenic
TGTAGATTCTTCCAAGCTCG+AGG 0.633915 4_1:-49766192 Msa0552980:CDS
ATAGATGAAGCTTTAAGACC+GGG 0.639683 4_1:-49762456 Msa0552980:CDS
GTTGCCAAGGTATTTCTGCA+AGG 0.640260 4_1:+49762282 None:intergenic
AGGCTCATGATGACTTGTGA+TGG 0.644166 4_1:-49769020 Msa0552980:CDS
AACCTTGGCAGAAGTTGTGT+GGG 0.644944 4_1:-49770385 Msa0552980:CDS
TCCAACTAGAGCTCTCTCCA+CGG 0.648433 4_1:+49765002 None:intergenic
ATGAATTGAAAACTAGGCTG+CGG 0.653407 4_1:-49765086 Msa0552980:CDS
GATTCCGCAAGAAAGTTCAA+GGG 0.654336 4_1:-49769944 Msa0552980:CDS
GATGAGGTAGGATCCGTGGA+AGG 0.659015 4_1:+49765285 None:intergenic
TTGATGTGGAAACGTGAGCA+TGG 0.659588 4_1:-49765942 Msa0552980:CDS
TGTGTGGTAATAAAATGAGA+GGG 0.660691 4_1:+49762178 None:intergenic
TCTATCAAAGCATAGACACC+CGG 0.670642 4_1:+49762438 None:intergenic
TATACGTTGCCATGTCAACG+TGG 0.671381 4_1:-49766096 Msa0552980:CDS
ATAGGAGATTAAGCAACTGG+TGG 0.671752 4_1:+49767200 None:intergenic
TCACGGCTACTCCCGATCCA+GGG 0.677895 4_1:-49764139 Msa0552980:CDS
AAACTAGATCATCAACACCC+AGG 0.677984 4_1:-49762054 Msa0552980:three_prime_UTR
GCGTCTCTTTGAATATGTCG+CGG 0.678941 4_1:-49770645 Msa0552980:CDS
GAAGTGATCCTATTTGGACA+GGG 0.688556 4_1:-49770210 Msa0552980:CDS
AGAAGGTCTGATGATATATG+CGG 0.688821 4_1:+49767730 None:intergenic
CTCATGGAAACCATTCTGTG+TGG 0.689161 4_1:+49762162 None:intergenic
GAAAGTATATGTGAAAACAG+AGG 0.692069 4_1:-49769657 Msa0552980:CDS
ATCATCAGAAACAAAGACTG+GGG 0.692993 4_1:+49768017 None:intergenic
AAGGAAGACACATTAGACTG+AGG 0.693275 4_1:-49761997 Msa0552980:three_prime_UTR
GGACAAGCAGAGTATACCAG+TGG 0.696547 4_1:+49769571 None:intergenic
AAAACAGAGGACACATCTGG+AGG 0.697664 4_1:-49769644 Msa0552980:CDS
GTGCGTTCGAGAGTGGACGA+TGG 0.697817 4_1:-49770877 Msa0552980:CDS
TAGATCATCAACACCCAGGG+TGG 0.702881 4_1:-49762050 Msa0552980:three_prime_UTR
AAAACTCTTGACGTTAAGAG+GGG 0.707798 4_1:+49767231 None:intergenic
ATACGTTGCCATGTCAACGT+GGG 0.708927 4_1:-49766095 Msa0552980:CDS
AAGATACTAAGTTCTGACTG+TGG 0.709221 4_1:+49764231 None:intergenic
CCAAATGGGAAGAAAGACTG+GGG 0.710304 4_1:-49770766 Msa0552980:CDS
AGAGCTGATGATACTGACAG+TGG 0.710372 4_1:-49768315 Msa0552980:CDS
TGTGCTCTGAAAATATACCA+AGG 0.717076 4_1:+49766607 None:intergenic
TTTATGGGTTGAAACGACTG+GGG 0.719393 4_1:-49770443 Msa0552980:CDS
CAACGAAACACAATCAAGAG+CGG 0.719618 4_1:+49770507 None:intergenic
ATTCAAACCCAATGGCACCG+GGG 0.722722 4_1:+49765575 None:intergenic
TTAAAGCAACCAGTGCCAGG+AGG 0.741595 4_1:-49769872 Msa0552980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAATTTCATAACAAAA+AGG + chr4_1:49765047-49765066 None:intergenic 10.0%
!! TTATAAATACATATGAAAAT+TGG - chr4_1:49770730-49770749 Msa0552980:CDS 10.0%
!!! TTTTGTATTTTTTTTTCAAT+TGG - chr4_1:49771403-49771422 Msa0552980:intron 10.0%
!! AAATGAAAATTTGGATTTAT+GGG - chr4_1:49762842-49762861 Msa0552980:CDS 15.0%
!!! AAAATCCCTTTTTAATTTTT+TGG - chr4_1:49763487-49763506 Msa0552980:CDS 15.0%
!! AAGAACAAATTATATTACTA+AGG - chr4_1:49766245-49766264 Msa0552980:CDS 15.0%
!! GAAAATATTAGTGATTTAAA+TGG + chr4_1:49766932-49766951 None:intergenic 15.0%
!!! ATCACTAATATTTTCTTTAA+TGG - chr4_1:49766937-49766956 Msa0552980:intron 15.0%
!! AAACATTAATAATGACTAAA+AGG + chr4_1:49768522-49768541 None:intergenic 15.0%
!!! TTTTAGTCATTATTAATGTT+TGG - chr4_1:49768521-49768540 Msa0552980:CDS 15.0%
!! TTCATGCATAAAATAAAATT+TGG + chr4_1:49769962-49769981 None:intergenic 15.0%
!! AATTCAATCAACTATCTTAT+CGG + chr4_1:49762048-49762067 None:intergenic 20.0%
!! CAAATGAAAATTTGGATTTA+TGG - chr4_1:49762841-49762860 Msa0552980:CDS 20.0%
!! AAAAATTCATCAATATGAAC+TGG + chr4_1:49763164-49763183 None:intergenic 20.0%
!!! TATAGCAACTTATGTTTTAA+AGG - chr4_1:49764030-49764049 Msa0552980:CDS 20.0%
!!! ATTTTGTCTATTAATGATGT+AGG - chr4_1:49764222-49764241 Msa0552980:CDS 20.0%
!! TAATTTCATAACAAAAAGGA+GGG + chr4_1:49765043-49765062 None:intergenic 20.0%
!! TTAATTTCATAACAAAAAGG+AGG + chr4_1:49765044-49765063 None:intergenic 20.0%
!!! TCAAAATTCTATCTAAAGTA+TGG - chr4_1:49765066-49765085 Msa0552980:CDS 20.0%
!! TCTGCAAAAATATTGATATT+TGG - chr4_1:49765412-49765431 Msa0552980:CDS 20.0%
!! CTGCAAAAATATTGATATTT+GGG - chr4_1:49765413-49765432 Msa0552980:CDS 20.0%
!! TGCAAAAATATTGATATTTG+GGG - chr4_1:49765414-49765433 Msa0552980:CDS 20.0%
!!! TTCAATTTTGTATGAACAAA+AGG - chr4_1:49765599-49765618 Msa0552980:CDS 20.0%
!!! TTAATCAATTTCTGTGTTTT+TGG + chr4_1:49766307-49766326 None:intergenic 20.0%
!! ACTATTATTGTGAATATTTG+AGG - chr4_1:49766726-49766745 Msa0552980:intron 20.0%
!! AACACAAAAAGAATCTAAAA+GGG - chr4_1:49767582-49767601 Msa0552980:intron 20.0%
!! ACATAAAAACAAGTAAAGAT+GGG - chr4_1:49768349-49768368 Msa0552980:CDS 20.0%
!!! ATGATTATTGAATTTGTTTC+AGG - chr4_1:49768417-49768436 Msa0552980:CDS 20.0%
!! ATGACTAAAAGGATATTAAA+GGG + chr4_1:49768511-49768530 None:intergenic 20.0%
!! AATGACTAAAAGGATATTAA+AGG + chr4_1:49768512-49768531 None:intergenic 20.0%
!!! AATAAAATTTGGCTTTGAAA+AGG + chr4_1:49769951-49769970 None:intergenic 20.0%
!!! GTTAATGTTAATTTTGACAA+AGG - chr4_1:49770005-49770024 Msa0552980:CDS 20.0%
!! GAAAAAATTTAATACATGCA+TGG + chr4_1:49770674-49770693 None:intergenic 20.0%
!!! TTGTTATTCATTTCGAAATA+TGG + chr4_1:49770703-49770722 None:intergenic 20.0%
!! AAATACATATGAAAATTGGT+AGG - chr4_1:49770734-49770753 Msa0552980:CDS 20.0%
!!! AGTATTTGCTAATGTTTATT+TGG + chr4_1:49770793-49770812 None:intergenic 20.0%
!! AAACTCAATTTCAAATATGA+AGG - chr4_1:49771057-49771076 Msa0552980:intron 20.0%
! AAAATAACCTGTTAAGATCA+AGG + chr4_1:49761958-49761977 None:intergenic 25.0%
! ACTCTGTTTCCTAAAAAATA+CGG - chr4_1:49761998-49762017 Msa0552980:three_prime_UTR 25.0%
! GTCTCATATTACAAGATATA+AGG + chr4_1:49762285-49762304 None:intergenic 25.0%
!! TTTAAAATGTTCTTCTGAAC+TGG + chr4_1:49762745-49762764 None:intergenic 25.0%
!!! GATGAATTTTTAAGCTTACA+TGG - chr4_1:49763173-49763192 Msa0552980:intron 25.0%
!!! AATATCGACAGAAGTATTAT+TGG + chr4_1:49763465-49763484 None:intergenic 25.0%
! CAGCACCAAAAAATTAAAAA+GGG + chr4_1:49763495-49763514 None:intergenic 25.0%
! TCAGCACCAAAAAATTAAAA+AGG + chr4_1:49763496-49763515 None:intergenic 25.0%
!!! TAATTTTTTGGTGCTGATTA+TGG - chr4_1:49763499-49763518 Msa0552980:CDS 25.0%
! GAAATTGAGTATGAAGTTAT+TGG - chr4_1:49763836-49763855 Msa0552980:intron 25.0%
! ATTTGCCATATTACAATTGA+TGG + chr4_1:49763906-49763925 None:intergenic 25.0%
!!! TATGTTTTAAAGGTTTGCAT+AGG - chr4_1:49764040-49764059 Msa0552980:CDS 25.0%
! TAATTCTAGGTATGATCATT+TGG - chr4_1:49764121-49764140 Msa0552980:CDS 25.0%
! GCTGAAATTTACTATATTCA+TGG - chr4_1:49764179-49764198 Msa0552980:CDS 25.0%
! CATCATTAATAGACAAAATG+TGG + chr4_1:49764221-49764240 None:intergenic 25.0%
!! ATGATATATCTGAAACTCTT+AGG - chr4_1:49764470-49764489 Msa0552980:intron 25.0%
! AAAACTTGCAAATAGTATCT+AGG + chr4_1:49764738-49764757 None:intergenic 25.0%
!!! AAGTTTTTTTCGCCTATTAT+AGG - chr4_1:49764751-49764770 Msa0552980:intron 25.0%
! GACTGAAATATATAAACCAA+AGG + chr4_1:49765108-49765127 None:intergenic 25.0%
! GGTTTATATATTTCAGTCTA+TGG - chr4_1:49765110-49765129 Msa0552980:CDS 25.0%
! ACAAAATTGAATCACTTAGA+AGG + chr4_1:49765590-49765609 None:intergenic 25.0%
! TGAATTACAAAACAGTTAAC+TGG + chr4_1:49765993-49766012 None:intergenic 25.0%
! TACACACATAAAAGACAATA+AGG + chr4_1:49766220-49766239 None:intergenic 25.0%
!! AAATTTTGTAATTAGTGCCT+AGG - chr4_1:49766270-49766289 Msa0552980:CDS 25.0%
! ATAAGCAACTGATCAAATTA+TGG + chr4_1:49766429-49766448 None:intergenic 25.0%
! AATATTCACAATAATAGTCC+CGG + chr4_1:49766724-49766743 None:intergenic 25.0%
! GCCTTAAGGTATATATTAAT+GGG - chr4_1:49766770-49766789 Msa0552980:intron 25.0%
! TCCCATTAATATATACCTTA+AGG + chr4_1:49766774-49766793 None:intergenic 25.0%
! CTTTATCAAAAGAAAAAGCA+TGG + chr4_1:49767009-49767028 None:intergenic 25.0%
!! ATTGAAGTGTTTAACCTTAA+TGG - chr4_1:49767132-49767151 Msa0552980:intron 25.0%
!! TAGCTGTATATTTTCTTTTG+TGG - chr4_1:49767393-49767412 Msa0552980:CDS 25.0%
!! AACAGAGATAAGTTTAAGAT+TGG + chr4_1:49767505-49767524 None:intergenic 25.0%
! ATCTTAAACTTATCTCTGTT+TGG - chr4_1:49767505-49767524 Msa0552980:intron 25.0%
! GAACACAAAAAGAATCTAAA+AGG - chr4_1:49767581-49767600 Msa0552980:intron 25.0%
! ATTGATATTGTGTCCAAAAT+TGG - chr4_1:49767631-49767650 Msa0552980:intron 25.0%
! GTTATTAGAATTTACAGAGA+TGG - chr4_1:49767915-49767934 Msa0552980:CDS 25.0%
! TGTATAAACTTTACTTGATG+AGG + chr4_1:49768034-49768053 None:intergenic 25.0%
! AATTAGTACAAATTCACATG+AGG - chr4_1:49768055-49768074 Msa0552980:CDS 25.0%
! ATTAGTACAAATTCACATGA+GGG - chr4_1:49768056-49768075 Msa0552980:CDS 25.0%
! TATATTGTTGCAAGGAAAAA+AGG - chr4_1:49768092-49768111 Msa0552980:CDS 25.0%
! GACATAAAAACAAGTAAAGA+TGG - chr4_1:49768348-49768367 Msa0552980:CDS 25.0%
! CATAAAAACAAGTAAAGATG+GGG - chr4_1:49768350-49768369 Msa0552980:CDS 25.0%
! ATAAAAACAAGTAAAGATGG+GGG - chr4_1:49768351-49768370 Msa0552980:CDS 25.0%
! CGCAAACATTAATTAAACAA+TGG + chr4_1:49768480-49768499 None:intergenic 25.0%
!! CTTTTAGTCATTGTTAAAGT+TGG - chr4_1:49768565-49768584 Msa0552980:CDS 25.0%
! TGTTATCTATAATCACTTTC+TGG - chr4_1:49768788-49768807 Msa0552980:CDS 25.0%
! GTTATCTATAATCACTTTCT+GGG - chr4_1:49768789-49768808 Msa0552980:CDS 25.0%
! AGCTACCATTAAATATATGT+GGG + chr4_1:49769126-49769145 None:intergenic 25.0%
! AAGCTACCATTAAATATATG+TGG + chr4_1:49769127-49769146 None:intergenic 25.0%
! AACTATTGTGTACCATTATA+AGG - chr4_1:49769449-49769468 Msa0552980:CDS 25.0%
! CCAAAAATTAAACATACCTT+GGG + chr4_1:49769480-49769499 None:intergenic 25.0%
! TCCAAAAATTAAACATACCT+TGG + chr4_1:49769481-49769500 None:intergenic 25.0%
!!! TGTTTAATTTTTGGACCTTT+TGG - chr4_1:49769486-49769505 Msa0552980:CDS 25.0%
! AATAAATCCATTGTGAATGA+AGG - chr4_1:49769747-49769766 Msa0552980:CDS 25.0%
! TTGTATTCTTAACGTAGATA+TGG - chr4_1:49770253-49770272 Msa0552980:CDS 25.0%
!!! AAATAAAGGCTGATCTTTTT+TGG + chr4_1:49770342-49770361 None:intergenic 25.0%
! AATAAGCCATCGTTAAATAA+AGG + chr4_1:49770356-49770375 None:intergenic 25.0%
! AAACAGCAAAAGGATATATT+TGG - chr4_1:49770430-49770449 Msa0552980:CDS 25.0%
!! GTTTTTATCGAACTACATAT+CGG - chr4_1:49770468-49770487 Msa0552980:CDS 25.0%
! AAAAAAGAAATGAGTAGACA+AGG + chr4_1:49770549-49770568 None:intergenic 25.0%
! CAGATGATAAAGTTTAATGA+TGG + chr4_1:49770626-49770645 None:intergenic 25.0%
!! CAATATCTTCATACTGTTTT+TGG - chr4_1:49770907-49770926 Msa0552980:intron 25.0%
! AATTCTAGCGAAGTAATTAA+AGG - chr4_1:49770954-49770973 Msa0552980:intron 25.0%
!!! TTTTTTCCTTCATTTTGTAG+AGG - chr4_1:49770993-49771012 Msa0552980:intron 25.0%
!! TTTTTCCTTCATTTTGTAGA+GGG - chr4_1:49770994-49771013 Msa0552980:intron 25.0%
! ACATTAAGTTATCAATCTCA+TGG + chr4_1:49771157-49771176 None:intergenic 25.0%
!!! ATAAATTGCCATAGCTTTTT+TGG - chr4_1:49771445-49771464 Msa0552980:CDS 25.0%
! TAAGATCAAGGTTTTTGTCT+TGG + chr4_1:49761946-49761965 None:intergenic 30.0%
ACAAAAACCTTGATCTTAAC+AGG - chr4_1:49761948-49761967 Msa0552980:three_prime_UTR 30.0%
CTCTGTTTCCTAAAAAATAC+GGG - chr4_1:49761999-49762018 Msa0552980:three_prime_UTR 30.0%
!!! TCAAGTATCCCGTATTTTTT+AGG + chr4_1:49762010-49762029 None:intergenic 30.0%
AAGCTATAAGTTCGCAAAAA+CGG - chr4_1:49762205-49762224 Msa0552980:three_prime_UTR 30.0%
GTCATATGAACATATAAGCT+AGG - chr4_1:49762238-49762257 Msa0552980:CDS 30.0%
TACAAGATATAAGGTGTGTA+TGG + chr4_1:49762276-49762295 None:intergenic 30.0%
! ACAGTGTGTGTTAATGTTTT+TGG - chr4_1:49762332-49762351 Msa0552980:intron 30.0%
TGCTAGGTTATCTTAATGAT+TGG - chr4_1:49762490-49762509 Msa0552980:intron 30.0%
ATATATGGATCTTCGTTGTT+GGG - chr4_1:49762593-49762612 Msa0552980:intron 30.0%
TGGGTTGTCAAATGAAAATT+TGG - chr4_1:49762833-49762852 Msa0552980:CDS 30.0%
AAAACTTTCAAATCCTTTCC+TGG + chr4_1:49763009-49763028 None:intergenic 30.0%
! GAAAGGATTTGAAAGTTTTG+TGG - chr4_1:49763010-49763029 Msa0552980:intron 30.0%
TTAATGGAAGTGATCCTATT+TGG - chr4_1:49763084-49763103 Msa0552980:intron 30.0%
AGAAAGAAAGCTATAGCAAT+GGG - chr4_1:49763302-49763321 Msa0552980:intron 30.0%
! GAACTTTAGTTTCGTATGAA+GGG - chr4_1:49763378-49763397 Msa0552980:intron 30.0%
TACCACAAAGATCAGAAAAA+AGG + chr4_1:49763580-49763599 None:intergenic 30.0%
! GAAAGTATATGTGAAAACAG+AGG - chr4_1:49763643-49763662 Msa0552980:intron 30.0%
TGAAGTTATTGGAGAAGATT+TGG - chr4_1:49763847-49763866 Msa0552980:CDS 30.0%
!! GAGAAGATTTGGTGAATTTA+TGG - chr4_1:49763858-49763877 Msa0552980:CDS 30.0%
GACTGTAGAGATTAACTATT+TGG + chr4_1:49763976-49763995 None:intergenic 30.0%
TTGCTATAGTAATCAGAGTT+TGG + chr4_1:49764018-49764037 None:intergenic 30.0%
CAGTAACTCATAGTAATTCT+AGG - chr4_1:49764108-49764127 Msa0552980:CDS 30.0%
TTTATTCCGAATCAGTTGAA+AGG - chr4_1:49764353-49764372 Msa0552980:intron 30.0%
!! ATATTCCATGGCTTTATAGA+TGG + chr4_1:49764407-49764426 None:intergenic 30.0%
! ATATATCTGAAACTCTTAGG+TGG - chr4_1:49764473-49764492 Msa0552980:intron 30.0%
TATCTAGGCAAATAGTATCT+GGG + chr4_1:49764723-49764742 None:intergenic 30.0%
TCAACAGTTTCTCCTATAAT+AGG + chr4_1:49764766-49764785 None:intergenic 30.0%
TTATAGGAGAAACTGTTGAT+CGG - chr4_1:49764767-49764786 Msa0552980:intron 30.0%
!!! AGGTTTTGAAGAAATTTGGT+AGG - chr4_1:49764806-49764825 Msa0552980:intron 30.0%
AAAAAAAATGTCTGCTGAGA+TGG - chr4_1:49764924-49764943 Msa0552980:CDS 30.0%
AAAAAAATGTCTGCTGAGAT+GGG - chr4_1:49764925-49764944 Msa0552980:CDS 30.0%
!!! TGGACTTGCTAGTTTTATTA+TGG - chr4_1:49765236-49765255 Msa0552980:CDS 30.0%
!! TCTTTGTTTCTGATGATGTA+AGG - chr4_1:49765289-49765308 Msa0552980:CDS 30.0%
!! TGATTCCATTTGTTGATTTG+AGG + chr4_1:49765339-49765358 None:intergenic 30.0%
CAAATCAACAAATGGAATCA+AGG - chr4_1:49765339-49765358 Msa0552980:CDS 30.0%
AACTGACAGTAAATAAACAC+TGG + chr4_1:49765702-49765721 None:intergenic 30.0%
!!! TAAAGCACTGCAAAAGATTT+TGG + chr4_1:49765844-49765863 None:intergenic 30.0%
! CATGCAATGTTTCTAAACAA+TGG + chr4_1:49765882-49765901 None:intergenic 30.0%
TAAAACTCTTGACGTTAAGA+GGG + chr4_1:49766073-49766092 None:intergenic 30.0%
TAATCTCCTATCTTTGATGT+CGG - chr4_1:49766112-49766131 Msa0552980:CDS 30.0%
! CTTGTATTTTCAACCTTGAA+AGG - chr4_1:49766168-49766187 Msa0552980:CDS 30.0%
!!! TTTTGGAGCAATTTTATCCT+AGG + chr4_1:49766290-49766309 None:intergenic 30.0%
! TAAAAGAGAGCGTGAATTAA+AGG - chr4_1:49766324-49766343 Msa0552980:CDS 30.0%
! AAAAGAGAGCGTGAATTAAA+GGG - chr4_1:49766325-49766344 Msa0552980:CDS 30.0%
AACTGATCAAATTATGGCAT+TGG + chr4_1:49766423-49766442 None:intergenic 30.0%
ATCAAAGGTTCACAACTATT+TGG + chr4_1:49766553-49766572 None:intergenic 30.0%
! GTCTAAGACATCTTTATCAA+AGG + chr4_1:49766568-49766587 None:intergenic 30.0%
ATTTGTGCCAATGATTTCTT+TGG - chr4_1:49766598-49766617 Msa0552980:CDS 30.0%
AATTATGCAGACAGAAATTG+AGG + chr4_1:49766652-49766671 None:intergenic 30.0%
GGCCTTAAGGTATATATTAA+TGG - chr4_1:49766769-49766788 Msa0552980:intron 30.0%
AAGTCATTATCTGTGATTGT+TGG - chr4_1:49766875-49766894 Msa0552980:intron 30.0%
TTTCAAATTGTCAGCCATTA+AGG + chr4_1:49767149-49767168 None:intergenic 30.0%
!! ATAAAGAAAGAGTGTTGATG+TGG - chr4_1:49767344-49767363 Msa0552980:CDS 30.0%
AATATCAATTGCTGATGAAG+TGG + chr4_1:49767620-49767639 None:intergenic 30.0%
AAAGGTTTATTCAAACCCAA+TGG + chr4_1:49767736-49767755 None:intergenic 30.0%
TAAACCTTTGTTACAAAGCT+TGG - chr4_1:49767747-49767766 Msa0552980:CDS 30.0%
! TTTACCAAGCTTTGTAACAA+AGG + chr4_1:49767754-49767773 None:intergenic 30.0%
TTGTTACAAAGCTTGGTAAA+AGG - chr4_1:49767754-49767773 Msa0552980:CDS 30.0%
CTTAGTAAAATAGCTACTTC+AGG + chr4_1:49767787-49767806 None:intergenic 30.0%
TGTGAGATTTCAATAAAAGC+AGG + chr4_1:49767889-49767908 None:intergenic 30.0%
TTAGAATTTACAGAGATGGT+TGG - chr4_1:49767919-49767938 Msa0552980:CDS 30.0%
TAAACTTTACTTGATGAGGT+AGG + chr4_1:49768030-49768049 None:intergenic 30.0%
GCTTGAATGAATTGAAAACT+AGG - chr4_1:49768208-49768227 Msa0552980:CDS 30.0%
CATTCAAAGCATATATAGAG+AGG - chr4_1:49768241-49768260 Msa0552980:CDS 30.0%
! TTTGTTTCAGGTACATACTA+TGG - chr4_1:49768429-49768448 Msa0552980:CDS 30.0%
! TCTAAAATAAAGCAGTCATC+CGG - chr4_1:49768708-49768727 Msa0552980:CDS 30.0%
AACATATGAGTGAGCATTTA+GGG + chr4_1:49768772-49768791 None:intergenic 30.0%
TAACATATGAGTGAGCATTT+AGG + chr4_1:49768773-49768792 None:intergenic 30.0%
TGAAAACTACAGACAATGTT+AGG + chr4_1:49768818-49768837 None:intergenic 30.0%
ATGCTTGATCAGTACAAAAT+AGG - chr4_1:49768961-49768980 Msa0552980:CDS 30.0%
TGCTTGATCAGTACAAAATA+GGG - chr4_1:49768962-49768981 Msa0552980:CDS 30.0%
!! CATAGAATTTCTAAAGCTTC+TGG - chr4_1:49769313-49769332 Msa0552980:intron 30.0%
CAAATAGGTTAACTGTGAAT+TGG + chr4_1:49769417-49769436 None:intergenic 30.0%
!! CCCAAGGTATGTTTAATTTT+TGG - chr4_1:49769477-49769496 Msa0552980:CDS 30.0%
TACAACTTCACGTATTGAAT+GGG - chr4_1:49769524-49769543 Msa0552980:CDS 30.0%
! CAGAGTATCATCTAAATGTT+GGG + chr4_1:49769630-49769649 None:intergenic 30.0%
TACTGTTCTTCTTAATTGCT+TGG - chr4_1:49769710-49769729 Msa0552980:CDS 30.0%
TCTTCGTAGAATTTATGAAG+AGG - chr4_1:49769815-49769834 Msa0552980:CDS 30.0%
!! TTAATTTTGACAAAGGACAG+AGG - chr4_1:49770012-49770031 Msa0552980:CDS 30.0%
GAGTTCATCAGTACAAAAAT+AGG + chr4_1:49770097-49770116 None:intergenic 30.0%
ATCTACGTTAAGAATACAAC+AGG + chr4_1:49770252-49770271 None:intergenic 30.0%
!! CTTGATTTGCTAAATCAAGA+AGG + chr4_1:49770309-49770328 None:intergenic 30.0%
AAACAAACTAGGTAAGCAAA+AGG + chr4_1:49770390-49770409 None:intergenic 30.0%
CATGATCATAGAAACAAACT+AGG + chr4_1:49770401-49770420 None:intergenic 30.0%
AGCAAAAGGATATATTTGGT+CGG - chr4_1:49770434-49770453 Msa0552980:CDS 30.0%
AACTACATATCGGTATATTC+AGG - chr4_1:49770478-49770497 Msa0552980:CDS 30.0%
ATATCGGTATATTCAGGATA+TGG - chr4_1:49770484-49770503 Msa0552980:CDS 30.0%
! CTTCTAATACCACTTCTTTT+GGG + chr4_1:49770511-49770530 None:intergenic 30.0%
!!! GTCTACTCATTTCTTTTTTC+TGG - chr4_1:49770550-49770569 Msa0552980:CDS 30.0%
GATAAAGTTTAATGATGGTC+AGG + chr4_1:49770621-49770640 None:intergenic 30.0%
!! AATAGATGAAGCTTTAAGAC+CGG - chr4_1:49770843-49770862 Msa0552980:CDS 30.0%
!!! TATCTTCATACTGTTTTTGG+AGG - chr4_1:49770910-49770929 Msa0552980:intron 30.0%
TTACCATCTACAGAATTTCA+AGG + chr4_1:49771093-49771112 None:intergenic 30.0%
TGTGTGGTAATAAAATGAGA+GGG + chr4_1:49771125-49771144 None:intergenic 30.0%
! CATTTTATTACCACACAGAA+TGG - chr4_1:49771128-49771147 Msa0552980:intron 30.0%
AATGTTTCAACTCATAGTCA+TGG - chr4_1:49771172-49771191 Msa0552980:intron 30.0%
TTAGTCAACCAAAAAAGCTA+TGG + chr4_1:49771456-49771475 None:intergenic 30.0%
!! TTTGAAGTTTTGTGACAAAG+TGG - chr4_1:49771476-49771495 Msa0552980:CDS 30.0%
! ATGCAATTTGGAAGGCTTTT+GGG + chr4_1:49761838-49761857 None:intergenic 35.0%
ATCAACTGAAGATTGTTCCA+TGG + chr4_1:49761914-49761933 None:intergenic 35.0%
AGCTATAAGTTCGCAAAAAC+GGG - chr4_1:49762206-49762225 Msa0552980:three_prime_UTR 35.0%
CATTAACACACACTGTTGAA+AGG + chr4_1:49762328-49762347 None:intergenic 35.0%
ACTGCATTAACACAAAAAGC+AGG + chr4_1:49762379-49762398 None:intergenic 35.0%
ATACAATTACCAAGACTGCT+AGG - chr4_1:49762474-49762493 Msa0552980:intron 35.0%
TTAAGATAACCTAGCAGTCT+TGG + chr4_1:49762486-49762505 None:intergenic 35.0%
CATATATGGATCTTCGTTGT+TGG - chr4_1:49762592-49762611 Msa0552980:intron 35.0%
! ATTTATGGGTTGAAACGACT+GGG - chr4_1:49762856-49762875 Msa0552980:CDS 35.0%
! GGTTCTTGTCATACACTTTT+TGG + chr4_1:49762899-49762918 None:intergenic 35.0%
AAAGTGTATGACAAGAACCT+TGG - chr4_1:49762900-49762919 Msa0552980:intron 35.0%
CATTGCTATAGCTTTCTTTC+TGG + chr4_1:49763303-49763322 None:intergenic 35.0%
CAGAAAGAAAGCTATAGCAA+TGG - chr4_1:49763301-49763320 Msa0552980:intron 35.0%
! GGAACTTTAGTTTCGTATGA+AGG - chr4_1:49763377-49763396 Msa0552980:intron 35.0%
GCATTCATTTCAAGCAAAAG+AGG + chr4_1:49763527-49763546 None:intergenic 35.0%
AAGATCAGAAAAAAGGAGCT+TGG + chr4_1:49763573-49763592 None:intergenic 35.0%
!!! CTCCTTTTTTCTGATCTTTG+TGG - chr4_1:49763575-49763594 Msa0552980:CDS 35.0%
TGTGGTATACTGAAGTCTAT+TGG - chr4_1:49763593-49763612 Msa0552980:CDS 35.0%
CTCTGCCATCAATTGTAATA+TGG - chr4_1:49763898-49763917 Msa0552980:CDS 35.0%
ATCTTCAACTATTCCTGCAT+TGG - chr4_1:49763946-49763965 Msa0552980:CDS 35.0%
TCTTCAACTATTCCTGCATT+GGG - chr4_1:49763947-49763966 Msa0552980:CDS 35.0%
TAACAGCCTTTCAACTGATT+CGG + chr4_1:49764362-49764381 None:intergenic 35.0%
CCATGGAATATATTCCAGAA+GGG - chr4_1:49764416-49764435 Msa0552980:intron 35.0%
CATTTGTTTCCATCAACCAA+TGG + chr4_1:49764514-49764533 None:intergenic 35.0%
!! CATTGGTTGATGGAAACAAA+TGG - chr4_1:49764512-49764531 Msa0552980:intron 35.0%
AAGCACTAAAGAATACAGTC+TGG + chr4_1:49764581-49764600 None:intergenic 35.0%
CCAACTAGAATACTCAAGTA+GGG + chr4_1:49764679-49764698 None:intergenic 35.0%
TCCAACTAGAATACTCAAGT+AGG + chr4_1:49764680-49764699 None:intergenic 35.0%
GTATCTAGGCAAATAGTATC+TGG + chr4_1:49764724-49764743 None:intergenic 35.0%
TATAGGAGAAACTGTTGATC+GGG - chr4_1:49764768-49764787 Msa0552980:intron 35.0%
!!! GGCAAGGTTTTGAAGAAATT+TGG - chr4_1:49764802-49764821 Msa0552980:intron 35.0%
GAAAACAAAGATCCATTGAC+TGG + chr4_1:49764833-49764852 None:intergenic 35.0%
!!! ATTTTTTTTGACAAGCGAGG+AGG + chr4_1:49764913-49764932 None:intergenic 35.0%
!!! GACATTTTTTTTGACAAGCG+AGG + chr4_1:49764916-49764935 None:intergenic 35.0%
AAAAAATGTCTGCTGAGATG+GGG - chr4_1:49764926-49764945 Msa0552980:CDS 35.0%
!! ATATTCTGCCTTTGAGTTGA+TGG - chr4_1:49764960-49764979 Msa0552980:CDS 35.0%
AACCAAAGGAGAAGAATCAT+CGG + chr4_1:49765094-49765113 None:intergenic 35.0%
GCATTACAAATCACGAATCA+AGG - chr4_1:49765194-49765213 Msa0552980:CDS 35.0%
ATCATCAGAAACAAAGACTG+GGG + chr4_1:49765286-49765305 None:intergenic 35.0%
CATCATCAGAAACAAAGACT+GGG + chr4_1:49765287-49765306 None:intergenic 35.0%
ACATCATCAGAAACAAAGAC+TGG + chr4_1:49765288-49765307 None:intergenic 35.0%
! GTGCAAAGGTTTAGTTTCTT+TGG - chr4_1:49765311-49765330 Msa0552980:CDS 35.0%
AGATTTGACCAAATGGCTAT+CGG + chr4_1:49765393-49765412 None:intergenic 35.0%
TTTGCAGAGATTTGACCAAA+TGG + chr4_1:49765400-49765419 None:intergenic 35.0%
ATTGATATTTGGGGAAACCA+TGG - chr4_1:49765423-49765442 Msa0552980:CDS 35.0%
GAATTCTTTCAACTGCTTCT+TGG + chr4_1:49765451-49765470 None:intergenic 35.0%
ACTGCTTGATACACAATGAA+GGG + chr4_1:49765496-49765515 None:intergenic 35.0%
AACTGCTTGATACACAATGA+AGG + chr4_1:49765497-49765516 None:intergenic 35.0%
ATACAGTCAACTAGAATGTC+TGG + chr4_1:49765528-49765547 None:intergenic 35.0%
AGAAGGTCTGATGATATATG+CGG + chr4_1:49765573-49765592 None:intergenic 35.0%
! AATCTTTTGCAGTGCTTTAG+AGG - chr4_1:49765845-49765864 Msa0552980:CDS 35.0%
AGCACTTGTCGAAAATAAAG+AGG - chr4_1:49765965-49765984 Msa0552980:CDS 35.0%
AAAACTCTTGACGTTAAGAG+GGG + chr4_1:49766072-49766091 None:intergenic 35.0%
GTAAAACTCTTGACGTTAAG+AGG + chr4_1:49766074-49766093 None:intergenic 35.0%
AAGATAGGAGATTAAGCAAC+TGG + chr4_1:49766106-49766125 None:intergenic 35.0%
TTACATCCGACATCAAAGAT+AGG + chr4_1:49766121-49766140 None:intergenic 35.0%
AGAGATGATTGTACCTTTCA+AGG + chr4_1:49766184-49766203 None:intergenic 35.0%
GCAAAATTCAGAAACTGTTG+TGG + chr4_1:49766361-49766380 None:intergenic 35.0%
TTACGCTCCAAAGAAATCAT+TGG + chr4_1:49766608-49766627 None:intergenic 35.0%
! TCTGTCTGCATAATTTTTGC+AGG - chr4_1:49766657-49766676 Msa0552980:intron 35.0%
!! TGTGCTCTGAAAATATACCA+AGG + chr4_1:49766696-49766715 None:intergenic 35.0%
! ATTTTCAGAGCACAATGTAC+CGG - chr4_1:49766702-49766721 Msa0552980:intron 35.0%
ATATATACCTTAAGGCCTTC+CGG + chr4_1:49766766-49766785 None:intergenic 35.0%
CTTCCAAAAATAACCAAGTC+TGG + chr4_1:49766830-49766849 None:intergenic 35.0%
! GAAGTTCATTTCCTGTTTTG+TGG - chr4_1:49766846-49766865 Msa0552980:intron 35.0%
TGTGATTGTTGGAATTCAAG+AGG - chr4_1:49766886-49766905 Msa0552980:intron 35.0%
ATGTTTACCAATGCACAACA+AGG + chr4_1:49766978-49766997 None:intergenic 35.0%
AAAGCAAATGATTCTCTGCA+TGG + chr4_1:49767075-49767094 None:intergenic 35.0%
GAAGAATCTACATACTCAGA+AGG + chr4_1:49767100-49767119 None:intergenic 35.0%
! AAACTTGCCTGTTTCTCAAA+AGG - chr4_1:49767180-49767199 Msa0552980:CDS 35.0%
! AACTTGCCTGTTTCTCAAAA+GGG - chr4_1:49767181-49767200 Msa0552980:CDS 35.0%
CAAACAGATGCTAAAGATAG+TGG - chr4_1:49767319-49767338 Msa0552980:CDS 35.0%
CTGGGTATCATGTAAACTTT+CGG + chr4_1:49767470-49767489 None:intergenic 35.0%
!! GATTGGCTTCTCAAAATTCT+GGG + chr4_1:49767488-49767507 None:intergenic 35.0%
!! AGATTGGCTTCTCAAAATTC+TGG + chr4_1:49767489-49767508 None:intergenic 35.0%
! TTCAACATCACTGCCAATTT+TGG + chr4_1:49767647-49767666 None:intergenic 35.0%
! GCAACGAAGTTTACATTTTC+TGG + chr4_1:49767682-49767701 None:intergenic 35.0%
!! TTTGAGGCTAAATTTGCTGT+CGG - chr4_1:49767834-49767853 Msa0552980:CDS 35.0%
AAAGAAACGCAGATTGTTGT+GGG + chr4_1:49767948-49767967 None:intergenic 35.0%
AAAAGAAACGCAGATTGTTG+TGG + chr4_1:49767949-49767968 None:intergenic 35.0%
! TCTGCGTTTCTTTTGTTAGA+TGG - chr4_1:49767955-49767974 Msa0552980:CDS 35.0%
!! AGCAAGTTATTTTCCTTCCA+CGG - chr4_1:49768002-49768021 Msa0552980:CDS 35.0%
ACTTGACTGTCTTTCATGTA+AGG + chr4_1:49768127-49768146 None:intergenic 35.0%
AGTACAAAGACACTGCATAA+AGG - chr4_1:49768144-49768163 Msa0552980:CDS 35.0%
ATGAATTGAAAACTAGGCTG+CGG - chr4_1:49768214-49768233 Msa0552980:CDS 35.0%
! GCATCTTTTGTCTACTATAG+AGG - chr4_1:49768275-49768294 Msa0552980:CDS 35.0%
TGTGTTTGTATAACACGTAC+TGG + chr4_1:49768658-49768677 None:intergenic 35.0%
TACGTGTTATACAAACACAC+AGG - chr4_1:49768659-49768678 Msa0552980:CDS 35.0%
! TCAACTGCGGATTATGAATA+GGG + chr4_1:49768866-49768885 None:intergenic 35.0%
! TTCAACTGCGGATTATGAAT+AGG + chr4_1:49768867-49768886 None:intergenic 35.0%
TAATCCAAGTGTTTCAACTG+CGG + chr4_1:49768879-49768898 None:intergenic 35.0%
ATCAGTACAAAATAGGGAGA+GGG - chr4_1:49768968-49768987 Msa0552980:CDS 35.0%
! TGACATTTTTCCCCCTTTTA+AGG - chr4_1:49769019-49769038 Msa0552980:CDS 35.0%
!!! ATTTTTCCCCCTTTTAAGGT+CGG - chr4_1:49769023-49769042 Msa0552980:CDS 35.0%
! AAGCTTTTCCGACCTTAAAA+GGG + chr4_1:49769034-49769053 None:intergenic 35.0%
! AAGATACTAAGTTCTGACTG+TGG + chr4_1:49769072-49769091 None:intergenic 35.0%
CAGAGCCCACATATATTTAA+TGG - chr4_1:49769118-49769137 Msa0552980:intron 35.0%
GTTGACAACATGCAACAAAT+AGG + chr4_1:49769432-49769451 None:intergenic 35.0%
CAATACGTGAAGTTGTACTT+AGG + chr4_1:49769521-49769540 None:intergenic 35.0%
GTACAACTTCACGTATTGAA+TGG - chr4_1:49769523-49769542 Msa0552980:CDS 35.0%
AATAGCATCTTTGTGTAAGC+TGG - chr4_1:49769590-49769609 Msa0552980:CDS 35.0%
! GCAGAGTATCATCTAAATGT+TGG + chr4_1:49769631-49769650 None:intergenic 35.0%
AGTAACAGAAGCTTCAAGAT+GGG + chr4_1:49769694-49769713 None:intergenic 35.0%
AAAGCAACCTTCATTCACAA+TGG + chr4_1:49769757-49769776 None:intergenic 35.0%
!!! TGAATGAAGGTTGCTTTTCT+TGG - chr4_1:49769760-49769779 Msa0552980:CDS 35.0%
!!! GAATGAAGGTTGCTTTTCTT+GGG - chr4_1:49769761-49769780 Msa0552980:CDS 35.0%
! TTTTCTTGGGAAATAGACGA+GGG - chr4_1:49769774-49769793 Msa0552980:CDS 35.0%
ATTTGTGTTCACTGCTCAAA+AGG + chr4_1:49769861-49769880 None:intergenic 35.0%
!!! TGTCGTTTTCTCTTCTATGT+TGG + chr4_1:49770123-49770142 None:intergenic 35.0%
TACTACCAGCAACATATAGA+CGG + chr4_1:49770210-49770229 None:intergenic 35.0%
GTTAAGAATACAACAGGCTT+AGG + chr4_1:49770246-49770265 None:intergenic 35.0%
! GATCAGCCTTTATTTAACGA+TGG - chr4_1:49770347-49770366 Msa0552980:CDS 35.0%
GATGCAGATAAAACAGCAAA+AGG - chr4_1:49770420-49770439 Msa0552980:CDS 35.0%
! CCTTCTAATACCACTTCTTT+TGG + chr4_1:49770512-49770531 None:intergenic 35.0%
CCAAAAGAAGTGGTATTAGA+AGG - chr4_1:49770509-49770528 Msa0552980:CDS 35.0%
GATGGTCAGGAATAGAAAAA+GGG + chr4_1:49770608-49770627 None:intergenic 35.0%
TGATGGTCAGGAATAGAAAA+AGG + chr4_1:49770609-49770628 None:intergenic 35.0%
!! ATAGATGAAGCTTTAAGACC+GGG - chr4_1:49770844-49770863 Msa0552980:CDS 35.0%
TGACCTTGAAATTCTGTAGA+TGG - chr4_1:49771087-49771106 Msa0552980:intron 35.0%
CTGTGTGGTAATAAAATGAG+AGG + chr4_1:49771126-49771145 None:intergenic 35.0%
! GAAAGCCAACATTTTTCTCA+CGG - chr4_1:49771194-49771213 Msa0552980:intron 35.0%
! AAAGCCAACATTTTTCTCAC+GGG - chr4_1:49771195-49771214 Msa0552980:intron 35.0%
TCTTCCTTAAACCAATAGAC+GGG + chr4_1:49771291-49771310 None:intergenic 35.0%
GTCTTCCTTAAACCAATAGA+CGG + chr4_1:49771292-49771311 None:intergenic 35.0%
! TGCAATTTGGAAGGCTTTTG+GGG + chr4_1:49761837-49761856 None:intergenic 40.0%
! GATGCAATTTGGAAGGCTTT+TGG + chr4_1:49761839-49761858 None:intergenic 40.0%
!!! ACAGTTTTGTTCCCTCCAAA+TGG - chr4_1:49762519-49762538 Msa0552980:intron 40.0%
!!! CAGTTTTGTTCCCTCCAAAT+GGG - chr4_1:49762520-49762539 Msa0552980:intron 40.0%
AGTCTTTCTTCCCATTTGGA+GGG + chr4_1:49762533-49762552 None:intergenic 40.0%
TCCAAATGGGAAGAAAGACT+GGG - chr4_1:49762533-49762552 Msa0552980:intron 40.0%
!!! GGAGATTTTCAAGTTCTGCT+TGG - chr4_1:49762614-49762633 Msa0552980:intron 40.0%
TTCTTCTGAACTGGTAGAGA+AGG + chr4_1:49762736-49762755 None:intergenic 40.0%
CAACGAAACACAATCAAGAG+CGG + chr4_1:49762796-49762815 None:intergenic 40.0%
! GATTTATGGGTTGAAACGAC+TGG - chr4_1:49762855-49762874 Msa0552980:CDS 40.0%
! TTTATGGGTTGAAACGACTG+GGG - chr4_1:49762857-49762876 Msa0552980:CDS 40.0%
ACCCTCAAAAACTTGGAGAA+GGG + chr4_1:49762978-49762997 None:intergenic 40.0%
GAAGTGATCCTATTTGGACA+GGG - chr4_1:49763090-49763109 Msa0552980:intron 40.0%
GTGGAAGAAGTTCTTTCTCA+TGG - chr4_1:49763128-49763147 Msa0552980:intron 40.0%
TGATTCCGCAAGAAAGTTCA+AGG - chr4_1:49763355-49763374 Msa0552980:intron 40.0%
GATTCCGCAAGAAAGTTCAA+GGG - chr4_1:49763356-49763375 Msa0552980:intron 40.0%
AGTTCCCTTGAACTTTCTTG+CGG + chr4_1:49763363-49763382 None:intergenic 40.0%
!!! GCTTGGCATCTATTTTAGCT+TGG + chr4_1:49763556-49763575 None:intergenic 40.0%
! ACATTGATAGCTAGTTCCAC+TGG - chr4_1:49763713-49763732 Msa0552980:intron 40.0%
CTTGTTAGCTGTATCGTAGT+TGG + chr4_1:49763753-49763772 None:intergenic 40.0%
CTACGATACAGCTAACAAGA+TGG - chr4_1:49763754-49763773 Msa0552980:intron 40.0%
TACAGCTAACAAGATGGAGA+TGG - chr4_1:49763760-49763779 Msa0552980:intron 40.0%
TAACGAGACGTTAGTTGCAA+TGG - chr4_1:49763802-49763821 Msa0552980:intron 40.0%
AACGAGACGTTAGTTGCAAT+GGG - chr4_1:49763803-49763822 Msa0552980:intron 40.0%
!!! AGTTGCAATGGGCTATCTTT+TGG - chr4_1:49763814-49763833 Msa0552980:intron 40.0%
CTTCAACTATTCCTGCATTG+GGG - chr4_1:49763948-49763967 Msa0552980:CDS 40.0%
GCATAGGTTTGTCTTTCTTG+TGG - chr4_1:49764056-49764075 Msa0552980:CDS 40.0%
TAGGTATGATCATTTGGCAG+AGG - chr4_1:49764127-49764146 Msa0552980:CDS 40.0%
AGGTATGATCATTTGGCAGA+GGG - chr4_1:49764128-49764147 Msa0552980:CDS 40.0%
CGCTTTGCACAATGCTAAAA+TGG + chr4_1:49764257-49764276 None:intergenic 40.0%
GCCATGGAATATATTCCAGA+AGG - chr4_1:49764415-49764434 Msa0552980:intron 40.0%
!! CCCTTCTGGAATATATTCCA+TGG + chr4_1:49764419-49764438 None:intergenic 40.0%
ATGGCGAAAGATTAATCTGC+AGG - chr4_1:49764531-49764550 Msa0552980:intron 40.0%
GATTCAGCCACTATAACTGA+AGG - chr4_1:49764601-49764620 Msa0552980:intron 40.0%
GCTATTGCCTTCAGTTATAG+TGG + chr4_1:49764611-49764630 None:intergenic 40.0%
GAAGGCAATAGCAATCTTGT+CGG - chr4_1:49764619-49764638 Msa0552980:intron 40.0%
CCCTACTTGAGTATTCTAGT+TGG - chr4_1:49764676-49764695 Msa0552980:intron 40.0%
GTATCTGGGCATATAGTATC+TGG + chr4_1:49764709-49764728 None:intergenic 40.0%
AATTTGGTAGGTCCAGTCAA+TGG - chr4_1:49764818-49764837 Msa0552980:intron 40.0%
AAAAATGTCTGCTGAGATGG+GGG - chr4_1:49764927-49764946 Msa0552980:CDS 40.0%
! TCTGATGATGTAAGGTGCAA+AGG - chr4_1:49765297-49765316 Msa0552980:CDS 40.0%
TGGCTCCTCAAATCAACAAA+TGG - chr4_1:49765331-49765350 Msa0552980:CDS 40.0%
!!! TGTTGTTTTAGTTTGCCCAC+AGG - chr4_1:49765811-49765830 Msa0552980:CDS 40.0%
!! GATTTTGGCAAGATTCCTGT+GGG + chr4_1:49765829-49765848 None:intergenic 40.0%
!! AGATTTTGGCAAGATTCCTG+TGG + chr4_1:49765830-49765849 None:intergenic 40.0%
AGCTTCTATCAGAACCTAAC+TGG - chr4_1:49765913-49765932 Msa0552980:CDS 40.0%
GCTTCTATCAGAACCTAACT+GGG - chr4_1:49765914-49765933 Msa0552980:CDS 40.0%
CTTAAGAACTCAACCCAGTT+AGG + chr4_1:49765930-49765949 None:intergenic 40.0%
ATAGGAGATTAAGCAACTGG+TGG + chr4_1:49766103-49766122 None:intergenic 40.0%
AGGTACAATCATCTCTGTGT+TGG - chr4_1:49766188-49766207 Msa0552980:CDS 40.0%
! ATGGCATTGGATTGTGTTTC+TGG + chr4_1:49766410-49766429 None:intergenic 40.0%
! GGTTTTTCTTCTCATCAGCA+AGG + chr4_1:49766532-49766551 None:intergenic 40.0%
! TTTTCAGAGCACAATGTACC+GGG - chr4_1:49766703-49766722 Msa0552980:intron 40.0%
AAAAATAACCAAGTCTGGCG+AGG + chr4_1:49766825-49766844 None:intergenic 40.0%
!! TCGCCAGACTTGGTTATTTT+TGG - chr4_1:49766824-49766843 Msa0552980:intron 40.0%
! TCATATGCCTTGTTGTGCAT+TGG - chr4_1:49766968-49766987 Msa0552980:intron 40.0%
!! CGTATACCCTTTTGAGAAAC+AGG + chr4_1:49767190-49767209 None:intergenic 40.0%
ACCTGAATGCTCAGTTTCTA+AGG - chr4_1:49767543-49767562 Msa0552980:intron 40.0%
! AAACTTCGTTGCCAGTCTTT+TGG - chr4_1:49767690-49767709 Msa0552980:intron 40.0%
TTATTCAAACCCAATGGCAC+CGG + chr4_1:49767730-49767749 None:intergenic 40.0%
GGCACAAAACTTGAAGTCAA+CGG + chr4_1:49767868-49767887 None:intergenic 40.0%
CAAATTCACATGAGGGCAAT+AGG - chr4_1:49768063-49768082 Msa0552980:CDS 40.0%
GGCAAGTCTATATTGTTGCA+AGG - chr4_1:49768084-49768103 Msa0552980:CDS 40.0%
TGAATTGAAAACTAGGCTGC+GGG - chr4_1:49768215-49768234 Msa0552980:CDS 40.0%
CGTACTGGAAGATTAATCAC+AGG + chr4_1:49768643-49768662 None:intergenic 40.0%
ATAAAGCAGTCATCCGGATT+CGG - chr4_1:49768714-49768733 Msa0552980:CDS 40.0%
ATAAGTGAATGACCCGAATC+CGG + chr4_1:49768730-49768749 None:intergenic 40.0%
CGGATTATGAATAGGGAATG+TGG + chr4_1:49768859-49768878 None:intergenic 40.0%
TAATCCGCAGTTGAAACACT+TGG - chr4_1:49768872-49768891 Msa0552980:CDS 40.0%
GATCAGTACAAAATAGGGAG+AGG - chr4_1:49768967-49768986 Msa0552980:CDS 40.0%
! AGCTTTTCCGACCTTAAAAG+GGG + chr4_1:49769033-49769052 None:intergenic 40.0%
! CAAGCTTTTCCGACCTTAAA+AGG + chr4_1:49769035-49769054 None:intergenic 40.0%
CTTGAGATGTAGAACTGTCA+CGG - chr4_1:49769144-49769163 Msa0552980:intron 40.0%
CACTTCAACACACATGAGAA+TGG + chr4_1:49769191-49769210 None:intergenic 40.0%
GAAGCATACTCTATTCTCGA+TGG - chr4_1:49769228-49769247 Msa0552980:intron 40.0%
TACTCTATTCTCGATGGATG+TGG - chr4_1:49769234-49769253 Msa0552980:intron 40.0%
ACTCTATTCTCGATGGATGT+GGG - chr4_1:49769235-49769254 Msa0552980:intron 40.0%
!!! AGTTTTGAAAGAGTGCTGCA+GGG + chr4_1:49769285-49769304 None:intergenic 40.0%
!!! AAGTTTTGAAAGAGTGCTGC+AGG + chr4_1:49769286-49769305 None:intergenic 40.0%
TGGTCCATCAGATTCATTCA+TGG - chr4_1:49769333-49769352 Msa0552980:CDS 40.0%
GAGACCATGAATGAATCTGA+TGG + chr4_1:49769340-49769359 None:intergenic 40.0%
CAGTAACAGAAGCTTCAAGA+TGG + chr4_1:49769695-49769714 None:intergenic 40.0%
! CTTTTCTTGGGAAATAGACG+AGG - chr4_1:49769773-49769792 Msa0552980:CDS 40.0%
! CTGCTCAAAAGGCATATACA+TGG + chr4_1:49769850-49769869 None:intergenic 40.0%
ACAGGCTTAGGAACTACAAT+AGG + chr4_1:49770165-49770184 None:intergenic 40.0%
AAACACCGTCTATATGTTGC+TGG - chr4_1:49770202-49770221 Msa0552980:CDS 40.0%
GTCTATATGTTGCTGGTAGT+AGG - chr4_1:49770209-49770228 Msa0552980:CDS 40.0%
GAAGGTAAACAAACGCTAAC+TGG + chr4_1:49770291-49770310 None:intergenic 40.0%
TCTATCAAAGCATAGACACC+CGG + chr4_1:49770865-49770884 None:intergenic 40.0%
AAGGTCCCTCTACAAAATGA+AGG + chr4_1:49771002-49771021 None:intergenic 40.0%
ATCATGTTGAAGAGTTGCCA+AGG + chr4_1:49771034-49771053 None:intergenic 40.0%
! AAGCCAACATTTTTCTCACG+GGG - chr4_1:49771196-49771215 Msa0552980:intron 40.0%
AAACTAGATCATCAACACCC+AGG - chr4_1:49771246-49771265 Msa0552980:intron 40.0%
AACTAGATCATCAACACCCA+GGG - chr4_1:49771247-49771266 Msa0552980:intron 40.0%
! TAGACGGGGATTTGGTAAAA+CGG + chr4_1:49771276-49771295 None:intergenic 40.0%
TTTACCAAATCCCCGTCTAT+TGG - chr4_1:49771277-49771296 Msa0552980:intron 40.0%
TAAACCAATAGACGGGGATT+TGG + chr4_1:49771284-49771303 None:intergenic 40.0%
!! AATCCCCGTCTATTGGTTTA+AGG - chr4_1:49771284-49771303 Msa0552980:intron 40.0%
CTTCCTTAAACCAATAGACG+GGG + chr4_1:49771290-49771309 None:intergenic 40.0%
AAGGAAGACACATTAGACTG+AGG - chr4_1:49771303-49771322 Msa0552980:intron 40.0%
GCTGAACCTAGTGATTTCAA+TGG + chr4_1:49771341-49771360 None:intergenic 40.0%
!!! AAGGCTTTTGGGGTTGTTCA+TGG + chr4_1:49761827-49761846 None:intergenic 45.0%
TCGGAACGATGCAATTTGGA+AGG + chr4_1:49761846-49761865 None:intergenic 45.0%
AGAGTCGGAACGATGCAATT+TGG + chr4_1:49761850-49761869 None:intergenic 45.0%
CTGAAGATTGTTCCATGGAG+TGG + chr4_1:49761909-49761928 None:intergenic 45.0%
! CAATTTTGTGCGTTCGAGAG+TGG - chr4_1:49762416-49762435 Msa0552980:CDS 45.0%
CAGTCTTTCTTCCCATTTGG+AGG + chr4_1:49762534-49762553 None:intergenic 45.0%
CTCCAAATGGGAAGAAAGAC+TGG - chr4_1:49762532-49762551 Msa0552980:intron 45.0%
CCAAATGGGAAGAAAGACTG+GGG - chr4_1:49762534-49762553 Msa0552980:intron 45.0%
TGACGGAGTTGAGGCATATA+TGG - chr4_1:49762578-49762597 Msa0552980:intron 45.0%
GCGTCTCTTTGAATATGTCG+CGG - chr4_1:49762655-49762674 Msa0552980:intron 45.0%
CGCTCTTGATTGTGTTTCGT+TGG - chr4_1:49762794-49762813 Msa0552980:CDS 45.0%
ATTTGACAACCCACCATGAG+AGG + chr4_1:49762826-49762845 None:intergenic 45.0%
AACCTTGGCAGAAGTTGTGT+GGG - chr4_1:49762915-49762934 Msa0552980:intron 45.0%
! CTTGTGCATTACGCCTTTTG+TGG - chr4_1:49762940-49762959 Msa0552980:intron 45.0%
! TGCATTACGCCTTTTGTGGT+TGG - chr4_1:49762944-49762963 Msa0552980:intron 45.0%
! AGCCCTTCTCCAAGTTTTTG+AGG - chr4_1:49762973-49762992 Msa0552980:intron 45.0%
! GCCCTTCTCCAAGTTTTTGA+GGG - chr4_1:49762974-49762993 Msa0552980:intron 45.0%
GACCCTCAAAAACTTGGAGA+AGG + chr4_1:49762979-49762998 None:intergenic 45.0%
TGGATGGACCCTCAAAAACT+TGG + chr4_1:49762985-49763004 None:intergenic 45.0%
CTTTCAAATCCTTTCCTGGC+TGG + chr4_1:49763005-49763024 None:intergenic 45.0%
TGAGCCATTGCTGCATTTGT+CGG - chr4_1:49763043-49763062 Msa0552980:intron 45.0%
GAGTTGCATTGTCGGGTTAA+TGG - chr4_1:49763068-49763087 Msa0552980:intron 45.0%
GGAAGTGATCCTATTTGGAC+AGG - chr4_1:49763089-49763108 Msa0552980:intron 45.0%
TCCTATTTGGACAGGGAGAT+TGG - chr4_1:49763097-49763116 Msa0552980:intron 45.0%
ACCAATCTCCCTGTCCAAAT+AGG + chr4_1:49763101-49763120 None:intergenic 45.0%
GCTATAGCAATGGGTAGCTT+AGG - chr4_1:49763311-49763330 Msa0552980:intron 45.0%
! GATTTAAAGCAACCAGTGCC+AGG - chr4_1:49763425-49763444 Msa0552980:intron 45.0%
GTGAAAACAGAGGACACATC+TGG - chr4_1:49763653-49763672 Msa0552980:intron 45.0%
AAAACAGAGGACACATCTGG+AGG - chr4_1:49763656-49763675 Msa0552980:intron 45.0%
TCTCTACAGTCAACTTCGTC+AGG - chr4_1:49763985-49764004 Msa0552980:CDS 45.0%
ATGATCATTTGGCAGAGGGA+AGG - chr4_1:49764132-49764151 Msa0552980:CDS 45.0%
TGATCATTTGGCAGAGGGAA+GGG - chr4_1:49764133-49764152 Msa0552980:CDS 45.0%
! TAGCATTGTGCAAAGCGCTA+AGG - chr4_1:49764260-49764279 Msa0552980:CDS 45.0%
! AGGCTCATGATGACTTGTGA+TGG - chr4_1:49764280-49764299 Msa0552980:intron 45.0%
!! CCATGGCTTTATAGATGGTG+TGG + chr4_1:49764402-49764421 None:intergenic 45.0%
CCACACCATCTATAAAGCCA+TGG - chr4_1:49764399-49764418 Msa0552980:intron 45.0%
GATGAAAGACTGCTCTCCAT+TGG - chr4_1:49764495-49764514 Msa0552980:intron 45.0%
TAATCTGCAGGCAGAACTCT+TGG - chr4_1:49764543-49764562 Msa0552980:intron 45.0%
AATCTGCAGGCAGAACTCTT+GGG - chr4_1:49764544-49764563 Msa0552980:intron 45.0%
TTGCTTGCCTAAGCAAGCTT+CGG + chr4_1:49764879-49764898 None:intergenic 45.0%
AGCTCTCTCCATCAACTCAA+AGG + chr4_1:49764971-49764990 None:intergenic 45.0%
AGAGCTGATGATACTGACAG+TGG - chr4_1:49764985-49765004 Msa0552980:CDS 45.0%
ACAAAAAGGAGGGAAGCAGA+AGG + chr4_1:49765033-49765052 None:intergenic 45.0%
CTCCGATGATTCTTCTCCTT+TGG - chr4_1:49765089-49765108 Msa0552980:CDS 45.0%
TTCAGTCTATGGCTCTTCAG+AGG - chr4_1:49765121-49765140 Msa0552980:CDS 45.0%
!! TCTTCAGAGGCTTGTTGACT+TGG - chr4_1:49765134-49765153 Msa0552980:CDS 45.0%
ATTCGTTGCCGATAGCCATT+TGG - chr4_1:49765382-49765401 Msa0552980:CDS 45.0%
TCAACTGCTTCTTGGAACCA+TGG + chr4_1:49765443-49765462 None:intergenic 45.0%
GAACAAAAGGTGAGATGCGT+TGG - chr4_1:49765612-49765631 Msa0552980:CDS 45.0%
CAGGCTTCTTGTAAATGCCT+TGG - chr4_1:49766676-49766695 Msa0552980:intron 45.0%
TGAGGTTGTTTGTCTCTTGC+CGG - chr4_1:49766744-49766763 Msa0552980:intron 45.0%
GACTTCGAAAGCCACAAAAC+AGG + chr4_1:49766860-49766879 None:intergenic 45.0%
TGTAGATTCTTCCAAGCTCG+AGG - chr4_1:49767108-49767127 Msa0552980:intron 45.0%
ACACTTCAATTCCTCGAGCT+TGG + chr4_1:49767122-49767141 None:intergenic 45.0%
TATACGTTGCCATGTCAACG+TGG - chr4_1:49767204-49767223 Msa0552980:CDS 45.0%
ATACGTTGCCATGTCAACGT+GGG - chr4_1:49767205-49767224 Msa0552980:CDS 45.0%
TCTGCAGTTTCGTGCTTTAG+TGG - chr4_1:49767265-49767284 Msa0552980:CDS 45.0%
! GTGCTTTAGTGGAGTCTTGT+GGG - chr4_1:49767276-49767295 Msa0552980:CDS 45.0%
! TGCTTTAGTGGAGTCTTGTG+GGG - chr4_1:49767277-49767296 Msa0552980:CDS 45.0%
TTTGACCCAGCGAAGATGTT+AGG + chr4_1:49767303-49767322 None:intergenic 45.0%
TTGATGTGGAAACGTGAGCA+TGG - chr4_1:49767358-49767377 Msa0552980:CDS 45.0%
GCCTTAGAAACTGAGCATTC+AGG + chr4_1:49767547-49767566 None:intergenic 45.0%
! TCTAAGGCTAATAGCTCAGC+TGG - chr4_1:49767559-49767578 Msa0552980:intron 45.0%
ATCATCCGTAGCCAAAAGAC+TGG + chr4_1:49767704-49767723 None:intergenic 45.0%
TATTCAAACCCAATGGCACC+GGG + chr4_1:49767729-49767748 None:intergenic 45.0%
! TAGCTTCTGCGTCTCTTTTG+AGG - chr4_1:49767818-49767837 Msa0552980:CDS 45.0%
TTTGTCTACTATAGAGGCCG+TGG - chr4_1:49768281-49768300 Msa0552980:CDS 45.0%
GCTCTAGTTGGAGTACAAGA+AGG - chr4_1:49768309-49768328 Msa0552980:CDS 45.0%
GGGTGAAATTTCGACACTTG+TGG - chr4_1:49768371-49768390 Msa0552980:CDS 45.0%
TAAAGCAGTCATCCGGATTC+GGG - chr4_1:49768715-49768734 Msa0552980:CDS 45.0%
! GCTTTTCCGACCTTAAAAGG+GGG + chr4_1:49769032-49769051 None:intergenic 45.0%
CTCTATTCTCGATGGATGTG+GGG - chr4_1:49769236-49769255 Msa0552980:intron 45.0%
!! GCAAGACAGGGAGAGTATTT+GGG + chr4_1:49769929-49769948 None:intergenic 45.0%
!! GGCTTTGAAAAGGCAAGACA+GGG + chr4_1:49769941-49769960 None:intergenic 45.0%
!! TGGCTTTGAAAAGGCAAGAC+AGG + chr4_1:49769942-49769961 None:intergenic 45.0%
TGACAAAGGACAGAGGTAAG+TGG - chr4_1:49770019-49770038 Msa0552980:CDS 45.0%
GACAAAGGACAGAGGTAAGT+GGG - chr4_1:49770020-49770039 Msa0552980:CDS 45.0%
AAGCAAGCTGAAACAGGCTT+AGG + chr4_1:49770177-49770196 None:intergenic 45.0%
TCATGCAAGCAAGCTGAAAC+AGG + chr4_1:49770183-49770202 None:intergenic 45.0%
GGATATGGTCCCAAAAGAAG+TGG - chr4_1:49770499-49770518 Msa0552980:CDS 45.0%
GAAAATTGGTAGGCTGAGTG+TGG - chr4_1:49770744-49770763 Msa0552980:CDS 45.0%
! TGAGTGTGGCTGACTTCTTT+AGG - chr4_1:49770758-49770777 Msa0552980:CDS 45.0%
! GTTGCCAAGGTATTTCTGCA+AGG + chr4_1:49771021-49771040 None:intergenic 45.0%
CTCATGGAAACCATTCTGTG+TGG + chr4_1:49771141-49771160 None:intergenic 45.0%
GTTCCCCGTGAGAAAAATGT+TGG + chr4_1:49771202-49771221 None:intergenic 45.0%
CTAGCGCCATTGAAATCACT+AGG - chr4_1:49771332-49771351 Msa0552980:intron 45.0%
CTGAGACTTCTGAGCAGAGT+CGG + chr4_1:49761865-49761884 None:intergenic 50.0%
AAGTCTCAGGATCACCAACC+TGG - chr4_1:49761876-49761895 Msa0552980:three_prime_UTR 50.0%
GGAGTGGAAATTGTCCAGGT+TGG + chr4_1:49761893-49761912 None:intergenic 50.0%
CCATGGAGTGGAAATTGTCC+AGG + chr4_1:49761897-49761916 None:intergenic 50.0%
CCTGGACAATTTCCACTCCA+TGG - chr4_1:49761894-49761913 Msa0552980:three_prime_UTR 50.0%
CCCCAGTCTTTCTTCCCATT+TGG + chr4_1:49762537-49762556 None:intergenic 50.0%
! TCGTTGGTGTTCTCCTCTCA+TGG - chr4_1:49762810-49762829 Msa0552980:CDS 50.0%
! TTGGTGTTCTCCTCTCATGG+TGG - chr4_1:49762813-49762832 Msa0552980:CDS 50.0%
TGGTGTTCTCCTCTCATGGT+GGG - chr4_1:49762814-49762833 Msa0552980:CDS 50.0%
GAACCTTGGCAGAAGTTGTG+TGG - chr4_1:49762914-49762933 Msa0552980:intron 50.0%
! GCTGAAGCACCAACCACAAA+AGG + chr4_1:49762956-49762975 None:intergenic 50.0%
CAAATCCTTTCCTGGCTGGA+TGG + chr4_1:49763001-49763020 None:intergenic 50.0%
GAGCCATTGCTGCATTTGTC+GGG - chr4_1:49763044-49763063 Msa0552980:intron 50.0%
TCACCCGACAAATGCAGCAA+TGG + chr4_1:49763050-49763069 None:intergenic 50.0%
TGTCGGGTGAGTTGCATTGT+CGG - chr4_1:49763060-49763079 Msa0552980:intron 50.0%
TTGGACAGGGAGATTGGTGA+AGG - chr4_1:49763103-49763122 Msa0552980:intron 50.0%
TTAAAGCAACCAGTGCCAGG+AGG - chr4_1:49763428-49763447 Msa0552980:intron 50.0%
TTGGAGCTACTAGTTCCTCC+TGG + chr4_1:49763446-49763465 None:intergenic 50.0%
GGACAAGCAGAGTATACCAG+TGG + chr4_1:49763732-49763751 None:intergenic 50.0%
ACTATTTGGCACCCCAATGC+AGG + chr4_1:49763962-49763981 None:intergenic 50.0%
AGGGAAGGGAAATGATGGTC+AGG - chr4_1:49764147-49764166 Msa0552980:CDS 50.0%
GGGAAGGGAAATGATGGTCA+GGG - chr4_1:49764148-49764167 Msa0552980:CDS 50.0%
ATTCCAGAAGGGCAAGTGAG+TGG - chr4_1:49764427-49764446 Msa0552980:intron 50.0%
TTCCAGAAGGGCAAGTGAGT+GGG - chr4_1:49764428-49764447 Msa0552980:intron 50.0%
! GACTGCTCTCCATTGGTTGA+TGG - chr4_1:49764502-49764521 Msa0552980:intron 50.0%
AGGCAGAACTCTTGGGTAGA+GGG - chr4_1:49764551-49764570 Msa0552980:intron 50.0%
GAAACTGTTGATCGGGCTGT+TGG - chr4_1:49764775-49764794 Msa0552980:intron 50.0%
TGTTGATCGGGCTGTTGGAA+AGG - chr4_1:49764780-49764799 Msa0552980:intron 50.0%
GTTGATCGGGCTGTTGGAAA+GGG - chr4_1:49764781-49764800 Msa0552980:intron 50.0%
! TTGACAAGCGAGGAGGCATA+AGG + chr4_1:49764906-49764925 None:intergenic 50.0%
CTGACAGTGGTTTCTTCTCG+TGG - chr4_1:49764998-49765017 Msa0552980:CDS 50.0%
AAGGAGGGAAGCAGAAGGTT+GGG + chr4_1:49765028-49765047 None:intergenic 50.0%
AAAGGAGGGAAGCAGAAGGT+TGG + chr4_1:49765029-49765048 None:intergenic 50.0%
ATCACGAATCAAGGCCCTGA+AGG - chr4_1:49765203-49765222 Msa0552980:CDS 50.0%
AATCAAGGCCCTGAAGGAAG+AGG - chr4_1:49765209-49765228 Msa0552980:CDS 50.0%
CAGAAACAAAGACTGGGGAC+TGG + chr4_1:49765281-49765300 None:intergenic 50.0%
!! GACAAGTGCTGAGTTGTCGA+GGG + chr4_1:49765955-49765974 None:intergenic 50.0%
TCGTCACATGAATGAGCGAC+TGG + chr4_1:49766020-49766039 None:intergenic 50.0%
ACTCTTGACGTTAAGAGGGG+AGG + chr4_1:49766069-49766088 None:intergenic 50.0%
GTTGTTTGTCTCTTGCCGGA+AGG - chr4_1:49766748-49766767 Msa0552980:intron 50.0%
CAAGTCTGGCGAGGATTGAA+TGG + chr4_1:49766816-49766835 None:intergenic 50.0%
CATTCAATCCTCGCCAGACT+TGG - chr4_1:49766814-49766833 Msa0552980:intron 50.0%
CGTGCTTTAGTGGAGTCTTG+TGG - chr4_1:49767275-49767294 Msa0552980:CDS 50.0%
!! CGTTGCCAGTCTTTTGGCTA+CGG - chr4_1:49767696-49767715 Msa0552980:intron 50.0%
TTTGGCTACGGATGATTCCC+CGG - chr4_1:49767708-49767727 Msa0552980:CDS 50.0%
ATTCAAACCCAATGGCACCG+GGG + chr4_1:49767728-49767747 None:intergenic 50.0%
ACTTGATGAGGTAGGATCCG+TGG + chr4_1:49768022-49768041 None:intergenic 50.0%
TCCAACTAGAGCTCTCTCCA+CGG + chr4_1:49768301-49768320 None:intergenic 50.0%
ATTTCGACACTTGTGGCAGC+TGG - chr4_1:49768378-49768397 Msa0552980:CDS 50.0%
AAGTGCTAGCGACAGTCTCA+AGG - chr4_1:49769206-49769225 Msa0552980:intron 50.0%
CTGATATTCACTCGCTCTGC+TGG + chr4_1:49769382-49769401 None:intergenic 50.0%
CCTTGGGCGATGCCTTATAA+TGG + chr4_1:49769464-49769483 None:intergenic 50.0%
!! CCATTATAAGGCATCGCCCA+AGG - chr4_1:49769461-49769480 Msa0552980:CDS 50.0%
CTTAGGCACAGTGAGCCAAA+AGG + chr4_1:49769504-49769523 None:intergenic 50.0%
!! AGACAGGGAGAGTATTTGGG+AGG + chr4_1:49769926-49769945 None:intergenic 50.0%
!! GGCAAGACAGGGAGAGTATT+TGG + chr4_1:49769930-49769949 None:intergenic 50.0%
GGGACCTTGCAGAAATACCT+TGG - chr4_1:49771014-49771033 Msa0552980:intron 50.0%
TAGATCATCAACACCCAGGG+TGG - chr4_1:49771250-49771269 Msa0552980:intron 50.0%
TTTGGTAAAACGGCCACCCT+GGG + chr4_1:49771266-49771285 None:intergenic 50.0%
ATTTGGTAAAACGGCCACCC+TGG + chr4_1:49771267-49771286 None:intergenic 50.0%
CGACTCTGCTCAGAAGTCTC+AGG - chr4_1:49761863-49761882 Msa0552980:three_prime_UTR 55.0%
GGAAAAACGCCCCAGCTTGA+CGG - chr4_1:49762561-49762580 Msa0552980:intron 55.0%
TGCCTCAACTCCGTCAAGCT+GGG + chr4_1:49762574-49762593 None:intergenic 55.0%
ATGCCTCAACTCCGTCAAGC+TGG + chr4_1:49762575-49762594 None:intergenic 55.0%
AAACGACTGGGGCAGTGCTT+GGG - chr4_1:49762868-49762887 Msa0552980:CDS 55.0%
CACCCACACAACTTCTGCCA+AGG + chr4_1:49762920-49762939 None:intergenic 55.0%
!! TTTTGAGGGTCCATCCAGCC+AGG - chr4_1:49762988-49763007 Msa0552980:intron 55.0%
GTCGGGTGAGTTGCATTGTC+GGG - chr4_1:49763061-49763080 Msa0552980:intron 55.0%
GACAGGGAGATTGGTGAAGG+TGG - chr4_1:49763106-49763125 Msa0552980:intron 55.0%
AGGGAGATTGGTGAAGGTGG+TGG - chr4_1:49763109-49763128 Msa0552980:intron 55.0%
CTACTAGTTCCTCCTGGCAC+TGG + chr4_1:49763440-49763459 None:intergenic 55.0%
GGCAGAGGGAAGGGAAATGA+TGG - chr4_1:49764142-49764161 Msa0552980:CDS 55.0%
AACCCACTCACTTGCCCTTC+TGG + chr4_1:49764433-49764452 None:intergenic 55.0%
CAGGCAGAACTCTTGGGTAG+AGG - chr4_1:49764550-49764569 Msa0552980:intron 55.0%
! TGTCCAGCCGAAGCTTGCTT+AGG - chr4_1:49764869-49764888 Msa0552980:intron 55.0%
TTGCCTAAGCAAGCTTCGGC+TGG + chr4_1:49764875-49764894 None:intergenic 55.0%
TCCAGCAGCCTCTTCCTTCA+GGG + chr4_1:49765220-49765239 None:intergenic 55.0%
!! CGACAAGTGCTGAGTTGTCG+AGG + chr4_1:49765956-49765975 None:intergenic 55.0%
TCTCTTGCCGGAAGGCCTTA+AGG - chr4_1:49766756-49766775 Msa0552980:intron 55.0%
TGCCATGTCAACGTGGGACA+CGG - chr4_1:49767211-49767230 Msa0552980:CDS 55.0%
TGGGGCCTAACATCTTCGCT+GGG - chr4_1:49767295-49767314 Msa0552980:CDS 55.0%
!! GATGATTCCCCGGTGCCATT+GGG - chr4_1:49767718-49767737 Msa0552980:CDS 55.0%
GATGAGGTAGGATCCGTGGA+AGG + chr4_1:49768018-49768037 None:intergenic 55.0%
!! GGCAGCTGGCATTGATTGCT+TGG - chr4_1:49768392-49768411 Msa0552980:CDS 55.0%
AGAATGGCTGACCCTGGATC+GGG + chr4_1:49769175-49769194 None:intergenic 55.0%
GAGAATGGCTGACCCTGGAT+CGG + chr4_1:49769176-49769195 None:intergenic 55.0%
CACATGAGAATGGCTGACCC+TGG + chr4_1:49769181-49769200 None:intergenic 55.0%
TCGATGGATGTGGGGCATGT+GGG - chr4_1:49769244-49769263 Msa0552980:intron 55.0%
AACGCACTGCTTGCACTCAC+TGG + chr4_1:49769670-49769689 None:intergenic 55.0%
!! CAGGGAGAGTATTTGGGAGG+AGG + chr4_1:49769923-49769942 None:intergenic 55.0%
GTGCGTTCGAGAGTGGACGA+TGG - chr4_1:49762423-49762442 Msa0552980:CDS 60.0%
GGGAAGAAAGACTGGGGCGA+AGG - chr4_1:49762540-49762559 Msa0552980:intron 60.0%
GCCTCAACTCCGTCAAGCTG+GGG + chr4_1:49762573-49762592 None:intergenic 60.0%
GAAACGACTGGGGCAGTGCT+TGG - chr4_1:49762867-49762886 Msa0552980:CDS 60.0%
AGGGTCCATCCAGCCAGGAA+AGG - chr4_1:49762993-49763012 Msa0552980:intron 60.0%
TCGGGCTGTTGGAAAGGGCA+AGG - chr4_1:49764786-49764805 Msa0552980:intron 60.0%
GTCCAGCAGCCTCTTCCTTC+AGG + chr4_1:49765221-49765240 None:intergenic 60.0%
GACCGTGTCCCACGTTGACA+TGG + chr4_1:49767216-49767235 None:intergenic 60.0%
GTGGGGCCTAACATCTTCGC+TGG - chr4_1:49767294-49767313 Msa0552980:CDS 60.0%
!! GGATGATTCCCCGGTGCCAT+TGG - chr4_1:49767717-49767736 Msa0552980:CDS 60.0%
! GCCGTGGAGAGAGCTCTAGT+TGG - chr4_1:49768297-49768316 Msa0552980:CDS 60.0%
TCACGGCTACTCCCGATCCA+GGG - chr4_1:49769161-49769180 Msa0552980:intron 60.0%
CTCGATGGATGTGGGGCATG+TGG - chr4_1:49769243-49769262 Msa0552980:intron 60.0%
GCCCCAGCTTGACGGAGTTG+AGG - chr4_1:49762569-49762588 Msa0552980:intron 65.0%
GCCCTGAAGGAAGAGGCTGC+TGG - chr4_1:49765216-49765235 Msa0552980:CDS 65.0%
GTCACGGCTACTCCCGATCC+AGG - chr4_1:49769160-49769179 Msa0552980:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 49761768 49771554 49761768 ID=Msa0552980;Name=Msa0552980
chr4_1 mRNA 49761768 49771554 49761768 ID=Msa0552980-mRNA-1;Parent=Msa0552980;Name=Msa0552980-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.88|0.9|1|1|1|10|465|2034
chr4_1 exon 49761768 49762309 49761768 ID=Msa0552980-mRNA-1:exon:14023;Parent=Msa0552980-mRNA-1
chr4_1 exon 49762391 49762482 49762391 ID=Msa0552980-mRNA-1:exon:14022;Parent=Msa0552980-mRNA-1
chr4_1 exon 49762792 49762895 49762792 ID=Msa0552980-mRNA-1:exon:14021;Parent=Msa0552980-mRNA-1
chr4_1 exon 49763486 49763651 49763486 ID=Msa0552980-mRNA-1:exon:14020;Parent=Msa0552980-mRNA-1
chr4_1 exon 49763840 49764281 49763840 ID=Msa0552980-mRNA-1:exon:14019;Parent=Msa0552980-mRNA-1
chr4_1 exon 49764884 49766643 49764884 ID=Msa0552980-mRNA-1:exon:14018;Parent=Msa0552980-mRNA-1
chr4_1 exon 49767133 49767500 49767133 ID=Msa0552980-mRNA-1:exon:14017;Parent=Msa0552980-mRNA-1
chr4_1 exon 49767702 49769078 49767702 ID=Msa0552980-mRNA-1:exon:14016;Parent=Msa0552980-mRNA-1
chr4_1 exon 49769316 49770924 49769316 ID=Msa0552980-mRNA-1:exon:14015;Parent=Msa0552980-mRNA-1
chr4_1 exon 49771445 49771554 49771445 ID=Msa0552980-mRNA-1:exon:14014;Parent=Msa0552980-mRNA-1
chr4_1 CDS 49771445 49771554 49771445 ID=Msa0552980-mRNA-1:cds;Parent=Msa0552980-mRNA-1
chr4_1 CDS 49769316 49770924 49769316 ID=Msa0552980-mRNA-1:cds;Parent=Msa0552980-mRNA-1
chr4_1 CDS 49767702 49769078 49767702 ID=Msa0552980-mRNA-1:cds;Parent=Msa0552980-mRNA-1
chr4_1 CDS 49767133 49767500 49767133 ID=Msa0552980-mRNA-1:cds;Parent=Msa0552980-mRNA-1
chr4_1 CDS 49764884 49766643 49764884 ID=Msa0552980-mRNA-1:cds;Parent=Msa0552980-mRNA-1
chr4_1 CDS 49763840 49764281 49763840 ID=Msa0552980-mRNA-1:cds;Parent=Msa0552980-mRNA-1
chr4_1 CDS 49763486 49763651 49763486 ID=Msa0552980-mRNA-1:cds;Parent=Msa0552980-mRNA-1
chr4_1 CDS 49762792 49762895 49762792 ID=Msa0552980-mRNA-1:cds;Parent=Msa0552980-mRNA-1
chr4_1 CDS 49762391 49762482 49762391 ID=Msa0552980-mRNA-1:cds;Parent=Msa0552980-mRNA-1
chr4_1 CDS 49762233 49762309 49762233 ID=Msa0552980-mRNA-1:cds;Parent=Msa0552980-mRNA-1
chr4_1 three_prime_UTR 49761768 49762232 49761768 ID=Msa0552980-mRNA-1:three_prime_utr;Parent=Msa0552980-mRNA-1
Gene Sequence

>Msa0552980

ATGGTCGATTTGGAAGCGAATCAAATGAAGCAAAATCGCAAGCGAAAGCAGAAAATCCATGAACAACCCCAAAAGCCTTCCAAATTGCATCGTTCCGACTCTGCTCAGAATAAGCTTAATCAAGCATTCAATTTTGTGCGTTCGAGAGTGGACGATGGTGCTCACATTGATCAGAATTGTGAAACTATACAATTACCAAGACTGCTAGGTTATCTTAATGATTGGATCTTGACAGTTTTGTTCCCTCCAAATGGGAAGAAAGACTGGGGCGAAGGAAAAACGCCCCAGCTTGACGGAGTTGAGGCATATATGGATCTTCGTTGTTGGGAGATTTTCAAGTTCTGCTTGGATGAGTCTTTGAAGTGTCGCGTCTCTTTGAATATGTCGCGGAATCTTCTACAGACTGTTCAATTTATTGTCAGAAATATTATGTTGCTGCTAGAGACCTTCTCTACCAGTTCAGAAGAACATTTTAAATCTGATGAAACGTTTAAATTATACGAGACCGCTCTTGATTGTGTTTCGTTGGTGTTCTCCTCTCATGGTGGGTTGTCAAATGAAAATTTGGATTTATGGGTTGAAACGACTGGGGCAGTGCTTGGGCTCGTCCAAAAAGTGTATGACAAGAACCTTGGCAGAAGTTGTGTGGGTGCTTGTGCATTACGCCTTTTGTGGTTGGTGCTTCAGCCCTTCTCCAAGTTTTTGAGGGTCCATCCAGCCAGGAAAGGATTTGAAAGTTTTGTGGTTAAACTTCTTGAGCCATTGCTGCATTTGTCGGGTGAGTTGCATTGTCGGGTTAATGGAAGTGATCCTATTTGGACAGGGAGATTGGTGAAGGTGGTGGAAGAAGTTCTTTCTCATGGACTTTTTCATCCAGTTCATATTGATGAATTTTTAAGCTTACATGGTTCAGAAAAGTATGTTGCTTCGTGTGATGATAAATCAAAAGATTCTAAAGCAACTATTAAGAGCTATCATAGACATTTGTTTGATGCGCTGAATGAAATTATATCCAGAAAGAAAGCTATAGCAATGGGTAGCTTAGGTTTGATATTTCGTTTGTATGCTGATTCCGCAAGAAAGTTCAAGGGAACTTTAGTTTCGTATGAAGGGAGCAATACAACAGAGAAAATAAATGATTTAAAGCAACCAGTGCCAGGAGGAACTAGTAGCTCCAATAATACTTCTGTCGATATTCAAAAATCCCTTTTTAATTTTTTGGTGCTGATTATGGAGCCTCTTTTGCTTGAAATGAATGCATGTATCCAAGCTAAAATAGATGCCAAGCTCCTTTTTTCTGATCTTTGTGGTATACTGAAGTCTATTGGTAATTTGCTTGCTAGTTTTATGCAAGAGAAAGTATATGTGAAAACAGAGGACACATCTGGAGGAGCTTGTCTTAATTTTTTGAAGAAAATATTTAATACATTGATAGCTAGTTCCACTGGTATACTCTGCTTGTCCAACTACGATACAGCTAACAAGATGGAGATGGAAATATTTATTTTATCAGCTAACGAGACGTTAGTTGCAATGGGCTATCTTTTGGAAATTGAGTATGAAGTTATTGGAGAAGATTTGGTGAATTTATGGCTTATTTTGTTATCATACTCTGCCATCAATTGTAATATGGCAAATGCTTTTGATCAGAGCTCATTATCTTCAACTATTCCTGCATTGGGGTGCCAAATAGTTAATCTCTACAGTCAACTTCGTCAGGTACAAATTGCCATTTTAGCATTGTGCAAAGCGCTAAGGCTCATGATGACTTGTGATGGTGATGCTGAAGAAAGTTCTTCTAAGTTATTGACATTTCTGTCTAATGATATTTATTCCGAATCAGTTGAAAGGCTGTTATCTTCACATAAGTTCATCCACACCATCTATAAAGCCATGGAATATATTCCAGAAGGGCAAGTGAGTGGGTTTATTAGACAGATAACAGATGATATATCTGAAACTCTTAGGTGGATGAAAGACTGCTCTCCATTGGTTGATGGAAACAAATGGCGAAAGATTAATCTGCAGGCAGAACTCTTGGGTAGAGGGCTCTCCAGACTGTATTCTTTAGTGCTTGATTCAGCCACTATAACTGAAGGCAATAGCAATCTTGTCGGAGTTGCTGTTAAAGAACTTATTTCATTATTGCGTCCCTACTTGAGTATTCTAGTTGGACAACAACCAGATACTATATGCCCAGATACTATTTGCCTAGATACTATTTGCAAGTTTTTTTCGCCTATTATAGGAGAAACTGTTGATCGGGCTGTTGGAAAGGGCAAGGTTTTGAAGAAATTTGGTAGGTCCAGTCAATGGATCTTTGTTTTCTTTTTGCAGTTGTTTGTGTCCAGCCGAAGCTTGCTTAGGCAAGCAATCAGCCTTATGCCTCCTCGCTTGTCAAAAAAAATGTCTGCTGAGATGGGGGATTACTCAGCATATTCTGCCTTTGAGTTGATGGAGAGAGCTGATGATACTGACAGTGGTTTCTTCTCGTGGATTGCCCAACCTTCTGCTTCCCTCCTTTTTGTTATGAAATTAATTTCAAAATTCTATCTAAAGTATGGCTCCGATGATTCTTCTCCTTTGGTTTATATATTTCAGTCTATGGCTCTTCAGAGGCTTGTTGACTTGGATAGACACATTATATTGTTGACGTATTTGCAAAAGAAGCATTACAAATCACGAATCAAGGCCCTGAAGGAAGAGGCTGCTGGACTTGCTAGTTTTATTATGGAAAACTTAGCATGCGTGTACCAGTCCCCAGTCTTTGTTTCTGATGATGTAAGGTGCAAAGGTTTAGTTTCTTTGGCTCCTCAAATCAACAAATGGAATCAAGGAATTTATGTTGCTAACAAAAATTCGTTGCCGATAGCCATTTGGTCAAATCTCTGCAAAAATATTGATATTTGGGGAAACCATGGTTCCAAGAAGCAGTTGAAAGAATTCTTCTCACATTTACTTCGTATTTCCCTTCATTGTGTATCAAGCAGTTTTCAAGAGCCAGACATTCTAGTTGACTGTATGCTGCTCAAGAGAGTCACTTTACCGCATATATCATCAGACCTTCTAAGTGATTCAATTTTGTATGAACAAAAGTTTGCCCACAGGAATCTTGCCAAAATCTTTTGCAGTGCTTTAGAGGAAACTGTGTTACCATTGTTTAGAAACATTGCATGTACTGCTGTCGAGCTTCTATCAGAACCTAACTGGGTTGAGTTCTTAAGTGCCCTCGACAACTCAGCACTTGTCGAAAATAAAGAGGTTCCAGTTAACTGTTTTGTAATTCAAAAACCAGTCGCTCATTCATGTGACGATACAGATGTCAGCAGCAGAGAAAATTCCTCCCCTCTTAACGTCAAGAGTTTTACAGATTGCCACCAGTTGCTTAATCTCCTATCTTTGATGTCGGATGTAAATGCAAGCTCTTTTTCAGATATTGTGTCTTGTATTTTCAACCTTGAAAGGCTTCTTGTAAATGCCTTGGTATATTTTCAGAGCACAATGTACCGGGACTATTATTGTGAATATTTGAGGTTGTTTGTCTCTTGCCGGAAGGCCTTAAGGTATATATTAATGGGATTCTGTGAGAAGACAGACACCATTCAATCCTCGCCAGACTTGGTTATTTTTGGAAGTTCATTTCCTGTTTTGTGGCTTTCGAAGTCATTATCTGTGATTGTTGGAATTCAAGAGGTATTCTCAGCAGAAAATATTCCATTTAAATCACTAATATTTTCTTTAATGGATCACACGTCATATGCCTTGTTGTGCATTGGTAAACATCAAATTATCCATGCTTTTTCTTTTGATAAAGAAGCTGAGATGTCTTGTGAAGAGATCTCTGATCACAAAGTTAGCCATGCAGAGAATCATTTGCTTTCACCTTCTGAGTATGTAGATTCTTCCAAGCTCGAGGAATTGAAGTGTTTAACCTTAATGGCTGACAATTTGAAAGAGCATATGCAAAACTTGCCTGTTTCTCAAAAGGGTATACGTTGCCATGTCAACGTGGGACACGGTCTTTCGTACGAAAACATTAATAGATTGTCTTCTGCAGTTTCGTGCTTTAGTGGAGTCTTGTGGGGCCTAACATCTTCGCTGGGTCAAACAGATGCTAAAGATAGTGGTCATAAAGAAAGAGTGTTGATGTGGAAACGTGAGCATGGCTCTGAACTAAATAGCTGTATATTTTCTTTTGTGGAAGTTGTTGATTTCTTTATAAACAAATTGCTCAATGAGAATAATCAACTCTCCGAAAGTTTACATGATACCCAGAATTTTGAGAAGCCAATCTTAAACTTATCTCTGTTTGGTACAAATAGTTTGTCACCTGAATGCTCAGTTTCTAAGGCTAATAGCTCAGCTGGAACACAAAAAGAATCTAAAAGGGAAGCTACTTGCTCCACTTCATCAGCAATTGATATTGTGTCCAAAATTGGCAGTGATGTTGAAAGTTTGTCAAATCCAGAAAATGTAAACTTCGTTGCCAGTCTTTTGGCTACGGATGATTCCCCGGTGCCATTGGGTTTGAATAAACCTTTGTTACAAAGCTTGGTAAAAGGTGATAATCCTGAAGTAGCTATTTTACTAAGACAACTGTTAATAGCTTCTGCGTCTCTTTTGAGGCTAAATTTGCTGTCGGATGATTCGCCGTTGACTTCAAGTTTTGTGCCTGCTTTTATTGAAATCTCACAAGTCTTGTTATTAGAATTTACAGAGATGGTTGGAGTCCCACAACAATCTGCGTTTCTTTTGTTAGATGGTGCTCTCAGCTATTTGACAGAATTAGCAAGTTATTTTCCTTCCACGGATCCTACCTCATCAAGTAAAGTTTATACAAAATTAGTACAAATTCACATGAGGGCAATAGGCAAGTCTATATTGTTGCAAGGAAAAAAGGCAACACTAACCTTACATGAAAGACAGTCAAGTACAAAGACACTGCATAAAGGATCATTTGAAACTTGCTCTTCTAATGAAATATACGACTCTTGCTTGAATGAATTGAAAACTAGGCTGCGGGTGTCATTCAAAGCATATATAGAGAGGCAATCAGAGTTGCATCTTTTGTCTACTATAGAGGCCGTGGAGAGAGCTCTAGTTGGAGTACAAGAAGGATTTGCTGTAATCTATGACATAAAAACAAGTAAAGATGGGGGTGAAATTTCGACACTTGTGGCAGCTGGCATTGATTGCTTGGACATGATTATTGAATTTGTTTCAGGTCGGAAAAGCTTGAAGCTCATCAAAAGCCACAGTCAGAACTTAGTATCTTCTATTTTCAGCATTATTGTGCATTTACAGAGCCCACATATATTTAATGGTAGCTTGAGATGTAGAACTGTCACGGCTACTCCCGATCCAGGGTCAGCCATTCTCATGTGTGTTGAAGTGCTAGCGACAGTCTCAAGGAAGCATACTCTATTCTCGATGGATGTGGGGCATGTGGGACACATGTTACATATCCCTGCAGCACTCTTTCAAAACTTCGATCAGCATAGAATTTCTAAAGCTTCTGGTCCATCAGATTCATTCATGGTCTCAGAAGAGCAAAATTATCATCCAGCAGAGCGAGTGAATATCAGTCATGTAGATCACCAATTCACAGTTAACCTATTTGTTGCATGTTGTCAACTATTGTGTACCATTATAAGGCATCGCCCAAGTGAGTGCAAGCAGTGCGTTGCCCATCTTGAAGCTTCTGTTACTGTTCTTCTTAATTGCTTGGAGACTGTTTTAGAGAATAAATCCATTGTGAATGAAGGTTGCTTTTCTTGGGAAATAGACGAGGGAGTGAAATGTGCTTGTTTTCTTCGTAGAATTTATGAAGAGATAAAACAGCAAAAGGATATATTTGGTCGGCAATGTTGTCTGTTTTTATCGAACTACATATCGGTATATTCAGGATATGGTCCCAAAAGAAGTGGTATTAGAAGAGAAATAGATGAAGCTTTAAGACCGGGTGTCTATGCTTTGATAGATGCTTGCTCAGTTGATGATCTTCAATATCTTCATACTGTTTTTGGAGAGGGACCTTGCAGAAATACCTTGGCAACTCTTCAACATGATTACAAACTCAATTTCAAATATGAAGGAAAAGTGTGA
Protein sequence

>Msa0552980

MVDLEANQMKQNRKRKQKIHEQPQKPSKLHRSDSAQNKLNQAFNFVRSRVDDGAHIDQNCETIQLPRLLGYLNDWILTVLFPPNGKKDWGEGKTPQLDGVEAYMDLRCWEIFKFCLDESLKCRVSLNMSRNLLQTVQFIVRNIMLLLETFSTSSEEHFKSDETFKLYETALDCVSLVFSSHGGLSNENLDLWVETTGAVLGLVQKVYDKNLGRSCVGACALRLLWLVLQPFSKFLRVHPARKGFESFVVKLLEPLLHLSGELHCRVNGSDPIWTGRLVKVVEEVLSHGLFHPVHIDEFLSLHGSEKYVASCDDKSKDSKATIKSYHRHLFDALNEIISRKKAIAMGSLGLIFRLYADSARKFKGTLVSYEGSNTTEKINDLKQPVPGGTSSSNNTSVDIQKSLFNFLVLIMEPLLLEMNACIQAKIDAKLLFSDLCGILKSIGNLLASFMQEKVYVKTEDTSGGACLNFLKKIFNTLIASSTGILCLSNYDTANKMEMEIFILSANETLVAMGYLLEIEYEVIGEDLVNLWLILLSYSAINCNMANAFDQSSLSSTIPALGCQIVNLYSQLRQVQIAILALCKALRLMMTCDGDAEESSSKLLTFLSNDIYSESVERLLSSHKFIHTIYKAMEYIPEGQVSGFIRQITDDISETLRWMKDCSPLVDGNKWRKINLQAELLGRGLSRLYSLVLDSATITEGNSNLVGVAVKELISLLRPYLSILVGQQPDTICPDTICLDTICKFFSPIIGETVDRAVGKGKVLKKFGRSSQWIFVFFLQLFVSSRSLLRQAISLMPPRLSKKMSAEMGDYSAYSAFELMERADDTDSGFFSWIAQPSASLLFVMKLISKFYLKYGSDDSSPLVYIFQSMALQRLVDLDRHIILLTYLQKKHYKSRIKALKEEAAGLASFIMENLACVYQSPVFVSDDVRCKGLVSLAPQINKWNQGIYVANKNSLPIAIWSNLCKNIDIWGNHGSKKQLKEFFSHLLRISLHCVSSSFQEPDILVDCMLLKRVTLPHISSDLLSDSILYEQKFAHRNLAKIFCSALEETVLPLFRNIACTAVELLSEPNWVEFLSALDNSALVENKEVPVNCFVIQKPVAHSCDDTDVSSRENSSPLNVKSFTDCHQLLNLLSLMSDVNASSFSDIVSCIFNLERLLVNALVYFQSTMYRDYYCEYLRLFVSCRKALRYILMGFCEKTDTIQSSPDLVIFGSSFPVLWLSKSLSVIVGIQEVFSAENIPFKSLIFSLMDHTSYALLCIGKHQIIHAFSFDKEAEMSCEEISDHKVSHAENHLLSPSEYVDSSKLEELKCLTLMADNLKEHMQNLPVSQKGIRCHVNVGHGLSYENINRLSSAVSCFSGVLWGLTSSLGQTDAKDSGHKERVLMWKREHGSELNSCIFSFVEVVDFFINKLLNENNQLSESLHDTQNFEKPILNLSLFGTNSLSPECSVSKANSSAGTQKESKREATCSTSSAIDIVSKIGSDVESLSNPENVNFVASLLATDDSPVPLGLNKPLLQSLVKGDNPEVAILLRQLLIASASLLRLNLLSDDSPLTSSFVPAFIEISQVLLLEFTEMVGVPQQSAFLLLDGALSYLTELASYFPSTDPTSSSKVYTKLVQIHMRAIGKSILLQGKKATLTLHERQSSTKTLHKGSFETCSSNEIYDSCLNELKTRLRVSFKAYIERQSELHLLSTIEAVERALVGVQEGFAVIYDIKTSKDGGEISTLVAAGIDCLDMIIEFVSGRKSLKLIKSHSQNLVSSIFSIIVHLQSPHIFNGSLRCRTVTATPDPGSAILMCVEVLATVSRKHTLFSMDVGHVGHMLHIPAALFQNFDQHRISKASGPSDSFMVSEEQNYHPAERVNISHVDHQFTVNLFVACCQLLCTIIRHRPSECKQCVAHLEASVTVLLNCLETVLENKSIVNEGCFSWEIDEGVKCACFLRRIYEEIKQQKDIFGRQCCLFLSNYISVYSGYGPKRSGIRREIDEALRPGVYALIDACSVDDLQYLHTVFGEGPCRNTLATLQHDYKLNFKYEGKV*