AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0556970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0556970 MtrunA17_Chr4g0045951 97.802 364 8 0 1 364 1 364 0.0 744
Msa0556970 MtrunA17_Chr4g0045941 81.868 364 54 1 1 364 1 352 0.0 620
Msa0556970 MtrunA17_Chr2g0283581 70.765 366 99 4 1 364 1 360 0.0 536
Msa0556970 MtrunA17_Chr2g0325481 60.308 325 128 1 38 362 43 366 4.30e-151 430
Msa0556970 MtrunA17_Chr4g0041011 61.129 319 123 1 45 363 47 364 2.67e-146 418
Msa0556970 MtrunA17_Chr3g0097891 51.821 357 159 4 8 362 5 350 3.40e-134 387
Msa0556970 MtrunA17_Chr2g0314801 52.078 361 158 7 1 358 1 349 7.24e-132 381
Msa0556970 MtrunA17_Chr3g0085071 52.174 322 152 2 43 363 44 364 8.70e-128 371
Msa0556970 MtrunA17_Chr3g0091031 52.025 321 152 2 44 363 30 349 2.35e-125 364
Msa0556970 MtrunA17_Chr3g0085081 52.336 321 151 2 44 363 30 349 2.99e-125 364
Msa0556970 MtrunA17_Chr5g0413851 50.138 363 170 5 3 362 5 359 2.50e-123 359
Msa0556970 MtrunA17_Chr5g0430371 48.179 357 159 5 31 362 44 399 5.93e-116 342
Msa0556970 MtrunA17_Chr3g0105301 49.405 336 154 4 43 362 41 376 2.70e-115 340
Msa0556970 MtrunA17_Chr2g0314791 48.930 327 148 7 45 362 29 345 1.38e-108 322
Msa0556970 MtrunA17_Chr1g0175671 40.517 348 183 6 40 364 165 511 1.27e-95 294
Msa0556970 MtrunA17_Chr7g0258851 40.517 348 183 6 40 364 243 589 7.68e-93 289
Msa0556970 MtrunA17_Chr4g0068111 39.835 364 190 9 25 362 93 453 5.66e-88 273
Msa0556970 MtrunA17_Chr1g0171171 40.299 335 183 5 39 362 47 375 2.18e-86 266
Msa0556970 MtrunA17_Chr4g0071391 37.209 344 194 6 42 364 106 448 6.35e-84 262
Msa0556970 MtrunA17_Chr8g0368461 37.500 352 185 6 45 362 178 528 1.20e-83 264
Msa0556970 MtrunA17_Chr1g0213281 38.372 344 187 7 43 362 173 515 3.44e-83 262
Msa0556970 MtrunA17_Chr1g0210771 38.529 340 185 8 38 362 52 382 1.50e-81 253
Msa0556970 MtrunA17_Chr5g0413271 36.937 333 194 5 45 362 145 476 7.20e-80 252
Msa0556970 MtrunA17_Chr7g0269991 37.690 329 188 6 45 358 137 463 4.79e-77 244
Msa0556970 MtrunA17_Chr4g0006991 37.135 342 191 7 45 362 86 427 3.53e-76 241
Msa0556970 MtrunA17_Chr4g0005491 32.992 391 233 10 1 362 17 407 1.66e-74 236
Msa0556970 MtrunA17_Chr3g0113671 36.070 341 192 7 44 358 105 445 2.53e-73 234
Msa0556970 MtrunA17_Chr3g0114101 35.380 342 197 7 45 362 89 430 2.78e-70 226
Msa0556970 MtrunA17_Chr5g0437291 35.756 344 192 8 44 358 164 507 6.08e-70 227
Msa0556970 MtrunA17_Chr3g0126021 38.576 337 182 7 45 362 129 459 7.23e-70 226
Msa0556970 MtrunA17_Chr7g0243301 34.626 361 208 9 30 362 49 409 1.56e-68 221
Msa0556970 MtrunA17_Chr8g0360521 35.311 354 200 9 33 362 61 409 3.64e-68 220
Msa0556970 MtrunA17_Chr1g0209921 44.958 238 124 6 33 266 32 266 1.00e-67 214
Msa0556970 MtrunA17_Chr4g0005481 33.803 355 210 7 27 358 90 442 2.45e-67 219
Msa0556970 MtrunA17_Chr7g0242701 35.965 342 195 7 45 362 86 427 3.20e-66 215
Msa0556970 MtrunA17_Chr7g0259711 35.244 349 192 8 43 362 89 432 1.15e-65 214
Msa0556970 MtrunA17_Chr2g0287901 33.235 340 202 6 45 360 97 435 8.75e-65 212
Msa0556970 MtrunA17_Chr5g0437601 33.518 361 216 8 26 362 64 424 4.32e-64 210
Msa0556970 MtrunA17_Chr8g0384151 33.433 335 204 5 42 362 87 416 9.38e-63 206
Msa0556970 MtrunA17_Chr1g0178081 31.624 351 161 10 36 362 46 341 7.64e-47 163
Msa0556970 MtrunA17_Chr5g0414061 30.199 351 210 12 36 355 85 431 6.08e-40 146
Msa0556970 MtrunA17_Chr6g0456681 31.362 389 226 13 7 358 20 404 1.48e-38 142
Msa0556970 MtrunA17_Chr6g0456691 29.014 355 212 9 42 364 75 421 9.31e-37 137
Msa0556970 MtrunA17_Chr5g0414091 30.508 354 213 10 33 355 73 424 9.37e-37 137
Msa0556970 MtrunA17_Chr3g0085101 55.455 110 48 1 229 337 1 110 7.61e-36 126
Msa0556970 MtrunA17_Chr5g0414051 28.900 391 226 13 10 358 36 416 1.03e-35 135
Msa0556970 MtrunA17_Chr6g0451321 30.387 362 214 15 32 362 103 457 2.04e-34 132
Msa0556970 MtrunA17_Chr4g0049421 28.775 351 211 14 45 362 48 392 3.95e-34 130
Msa0556970 MtrunA17_Chr6g0476041 28.693 352 211 14 42 358 164 510 4.46e-33 129
Msa0556970 MtrunA17_Chr4g0070341 31.111 360 206 15 38 362 119 471 8.77e-32 124
Msa0556970 MtrunA17_Chr7g0226991 29.213 356 216 11 32 355 44 395 1.25e-31 123
Msa0556970 MtrunA17_Chr8g0384421 30.145 345 209 13 45 362 133 472 1.81e-31 124
Msa0556970 MtrunA17_Chr3g0140371 29.310 348 207 13 43 358 16 356 7.26e-31 120
Msa0556970 MtrunA17_Chr1g0188191 28.571 350 208 13 45 358 234 577 3.41e-30 121
Msa0556970 MtrunA17_Chr8g0347321 27.793 367 196 15 45 363 95 440 5.30e-30 119
Msa0556970 MtrunA17_Chr5g0414041 27.920 351 208 11 45 358 87 429 7.24e-30 119
Msa0556970 MtrunA17_Chr8g0391481 27.957 372 232 12 19 358 1 368 7.62e-30 118
Msa0556970 MtrunA17_Chr2g0283851 27.933 358 209 13 46 364 56 403 1.25e-29 117
Msa0556970 MtrunA17_Chr8g0387921 25.000 352 216 11 45 358 74 415 7.02e-26 107
Msa0556970 MtrunA17_Chr6g0455901 28.371 356 213 15 41 358 61 412 1.87e-25 106
Msa0556970 MtrunA17_Chr1g0209931 53.409 88 37 2 276 362 8 92 2.17e-22 90.5
Msa0556970 MtrunA17_Chr7g0221271 33.077 130 87 0 42 171 76 205 1.39e-20 89.0
Msa0556970 MtrunA17_Chr5g0429211 50.000 88 42 2 91 177 187 273 1.07e-19 87.8
Msa0556970 MtrunA17_Chr7g0221291 40.449 89 53 0 45 133 79 167 7.42e-19 83.2
Msa0556970 MtrunA17_Chr2g0287931 29.600 125 74 3 105 215 2 126 1.20e-13 67.4
Msa0556970 MtrunA17_Chr5g0429191 57.778 45 10 1 320 355 1 45 1.87e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0556970 AT1G29050.1 64.183 349 123 2 17 364 33 380 1.40e-174 491
Msa0556970 AT2G34070.1 61.219 361 128 4 15 364 26 385 2.53e-167 472
Msa0556970 AT2G42570.1 58.282 326 136 0 37 362 39 364 1.74e-147 421
Msa0556970 AT2G31110.2 53.371 356 159 1 8 363 15 363 9.32e-146 417
Msa0556970 AT3G14850.2 55.205 317 139 2 45 358 34 350 4.14e-131 379
Msa0556970 AT2G30900.1 49.300 357 174 5 11 362 11 365 1.59e-122 358
Msa0556970 AT2G34070.2 66.270 252 82 3 115 364 1 251 1.61e-122 353
Msa0556970 AT1G78710.1 50.307 326 157 4 40 362 33 356 3.28e-122 357
Msa0556970 AT5G58600.1 49.258 337 154 5 43 362 64 400 2.24e-109 326
Msa0556970 AT2G30010.1 44.915 354 166 6 38 362 43 396 3.04e-100 302
Msa0556970 AT2G30010.2 44.915 354 166 6 38 362 86 439 4.17e-100 303
Msa0556970 AT3G14850.1 55.466 247 107 2 115 358 1 247 5.01e-100 296
Msa0556970 AT2G31110.3 51.969 254 115 1 8 261 15 261 5.16e-97 289
Msa0556970 AT5G06700.1 39.394 363 196 6 25 364 235 596 1.95e-91 286
Msa0556970 AT2G31110.1 58.173 208 87 0 156 363 8 215 2.20e-91 273
Msa0556970 AT1G78710.2 42.025 326 131 5 40 362 26 296 1.26e-87 266
Msa0556970 AT3G12060.1 39.216 357 193 5 29 362 180 535 1.35e-87 275
Msa0556970 AT5G20590.1 37.752 347 193 6 40 364 136 481 1.26e-85 268
Msa0556970 AT2G30900.2 49.802 253 123 3 11 261 11 261 2.68e-85 259
Msa0556970 AT3G54260.1 40.120 334 174 8 45 362 51 374 1.61e-84 261
Msa0556970 AT3G62390.1 35.734 361 211 7 16 358 110 467 6.91e-80 252
Msa0556970 AT5G49340.1 36.620 355 185 8 40 362 95 441 6.81e-79 249
Msa0556970 AT1G60790.1 36.236 356 200 8 33 362 178 532 1.37e-78 251
Msa0556970 AT5G01360.2 37.176 347 189 8 43 362 34 378 1.73e-78 246
Msa0556970 AT5G58600.2 51.327 226 108 2 43 266 64 289 4.50e-78 242
Msa0556970 AT5G01360.1 37.176 347 189 8 43 362 90 434 7.38e-78 246
Msa0556970 AT3G11030.1 37.069 348 194 10 40 362 101 448 1.48e-69 225
Msa0556970 AT5G01620.2 34.483 348 202 8 35 358 100 445 2.90e-69 224
Msa0556970 AT5G01620.1 34.483 348 202 8 35 358 100 445 2.90e-69 224
Msa0556970 AT5G01620.3 34.483 348 202 8 35 358 108 453 2.99e-69 224
Msa0556970 AT5G06230.2 35.000 360 200 9 33 362 9 364 4.08e-69 221
Msa0556970 AT5G19160.1 35.447 347 194 8 43 360 97 442 6.54e-69 224
Msa0556970 AT5G06230.1 33.005 406 219 11 6 362 4 405 8.80e-69 222
Msa0556970 AT2G40150.1 33.787 367 211 8 24 358 50 416 2.56e-68 221
Msa0556970 AT3G55990.1 35.191 341 193 8 45 358 140 479 5.89e-68 222
Msa0556970 AT3G06080.2 34.302 344 199 7 43 360 101 443 9.24e-68 221
Msa0556970 AT1G73140.1 35.465 344 195 8 43 362 65 405 9.26e-68 219
Msa0556970 AT1G48880.1 35.366 328 191 6 45 358 115 435 1.12e-67 220
Msa0556970 AT2G40160.2 34.349 361 186 10 42 362 74 423 1.69e-66 217
Msa0556970 AT2G40160.1 34.358 358 184 10 42 359 74 420 3.93e-66 215
Msa0556970 AT2G40320.1 35.632 348 198 8 40 362 76 422 6.64e-66 215
Msa0556970 AT2G38320.1 33.237 346 203 8 45 362 59 404 8.79e-65 211
Msa0556970 AT3G11570.1 34.985 323 188 6 61 362 98 419 2.33e-64 211
Msa0556970 AT5G20590.2 36.214 243 141 4 40 268 136 378 7.80e-56 187
Msa0556970 AT3G62390.2 34.211 266 162 4 16 269 110 374 1.10e-55 188
Msa0556970 AT2G38320.2 31.464 321 193 7 69 362 1 321 1.88e-54 182
Msa0556970 AT5G19160.2 33.750 240 145 3 43 268 97 336 1.85e-49 170
Msa0556970 AT3G06080.1 32.500 240 148 3 43 268 101 340 4.19e-46 161
Msa0556970 AT2G40160.3 33.603 247 132 6 42 266 74 310 1.37e-45 159
Msa0556970 AT5G06230.3 33.203 256 151 4 33 268 50 305 1.94e-45 158
Msa0556970 AT5G64470.3 31.214 346 207 12 45 363 55 396 4.40e-41 149
Msa0556970 AT5G64470.2 31.161 353 204 14 45 363 55 402 1.60e-39 145
Msa0556970 AT1G70230.1 27.273 352 203 10 45 362 79 411 4.07e-35 133
Msa0556970 AT4G25360.1 30.114 352 202 13 45 358 175 520 4.83e-35 135
Msa0556970 AT4G25360.2 30.114 352 202 13 45 358 175 520 4.83e-35 135
Msa0556970 AT1G01430.1 28.329 353 206 12 45 358 99 443 3.70e-33 129
Msa0556970 AT5G15900.1 29.310 348 215 9 43 362 65 409 8.85e-33 127
Msa0556970 AT5G15900.2 29.310 348 215 9 43 362 84 428 1.03e-32 127
Msa0556970 AT3G28150.1 27.778 396 247 15 1 362 20 410 1.32e-32 126
Msa0556970 AT5G64020.1 28.412 359 209 12 45 362 57 408 1.70e-32 126
Msa0556970 AT5G15890.1 28.032 371 221 12 23 358 159 518 3.01e-32 127
Msa0556970 AT5G51640.1 28.409 352 209 10 45 358 138 484 1.01e-31 125
Msa0556970 AT5G20680.6 28.324 346 214 12 45 362 118 457 3.58e-31 123
Msa0556970 AT3G02440.1 26.957 345 214 10 45 358 127 464 4.74e-31 123
Msa0556970 AT3G02440.2 26.957 345 214 10 45 358 135 472 5.63e-31 123
Msa0556970 AT5G20680.4 28.324 346 214 12 45 362 212 551 6.24e-31 123
Msa0556970 AT5G20680.1 28.324 346 214 12 45 362 212 551 6.24e-31 123
Msa0556970 AT5G20680.3 28.324 346 214 12 45 362 212 551 6.24e-31 123
Msa0556970 AT5G20680.5 28.324 346 214 12 45 362 212 551 6.24e-31 123
Msa0556970 AT5G20680.2 28.324 346 214 12 45 362 194 533 6.66e-31 123
Msa0556970 AT2G37720.1 28.184 369 215 12 30 362 128 482 1.56e-30 122
Msa0556970 AT2G14530.1 28.389 391 236 15 11 362 21 406 9.42e-30 118
Msa0556970 AT4G01080.1 26.478 389 243 12 6 358 45 426 2.18e-29 118
Msa0556970 AT4G23790.1 28.045 353 209 16 41 355 75 420 3.68e-26 108
Msa0556970 AT4G11090.1 26.667 360 209 14 41 358 75 421 6.13e-26 108
Msa0556970 AT5G64470.4 29.719 249 153 8 45 274 55 300 1.73e-23 99.8
Msa0556970 AT5G64470.1 29.719 249 153 8 45 274 55 300 2.30e-23 99.4

Find 122 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATGCCTTACCAGCATTTA+TGG 0.069415 4_1:-55226273 None:intergenic
GAAATTTAGAGGGTTGTTTA+TGG 0.216367 4_1:-55221862 None:intergenic
ACTATACCGTACACCATATT+TGG 0.252473 4_1:+55226205 Msa0556970:CDS
TATCAAGTCTTCCAAACTTT+TGG 0.255909 4_1:-55222365 None:intergenic
GGTAGAGCCGCCGGATATTT+TGG 0.256402 4_1:-55227124 None:intergenic
ACAAAATTAGTGCCAGATAA+AGG 0.274759 4_1:-55222013 None:intergenic
ACCCTCAAAATAGGACAATA+TGG 0.278149 4_1:+55222122 Msa0556970:exon
AGGGGTTTCATGGATGGATT+AGG 0.309360 4_1:-55221937 None:intergenic
CAATTTGATTGCCAAAAGTT+TGG 0.310576 4_1:+55222354 Msa0556970:CDS
AGGAGTATGTTCCAAGTATC+AGG 0.318771 4_1:-55227310 None:intergenic
TTCTCTGGTAGTTGGGTGAT+TGG 0.321358 4_1:+55222282 Msa0556970:CDS
ACATTGTTAGAGCTGCATTT+AGG 0.323362 4_1:-55227330 None:intergenic
ATTGAGTTTGAGGGGTTTCA+TGG 0.329709 4_1:-55221947 None:intergenic
TTGAAAGAAGACTTTAGTTT+TGG 0.332563 4_1:-55226910 None:intergenic
CTCCATGTGAACCCTTTATC+TGG 0.356145 4_1:+55222001 Msa0556970:five_prime_UTR
AGGTATGGTTTGAAATTTAG+AGG 0.358769 4_1:-55221873 None:intergenic
TGAATTATGTCCACCAAATA+TGG 0.363768 4_1:-55226218 None:intergenic
GGGAGAAATCAAAATCAAAA+TGG 0.363991 4_1:-55221841 None:intergenic
AAATTTAGAGGGTTGTTTAT+GGG 0.364925 4_1:-55221861 None:intergenic
GATGATACTGCGCAGGACTA+TGG 0.367889 4_1:+55226170 Msa0556970:intron
CCCTTGTGAATCTCCCTTGT+GGG 0.370003 4_1:-55226339 None:intergenic
AACAATTGTAATTTGTTCTC+TGG 0.377014 4_1:+55222267 Msa0556970:CDS
AAAACTAAAGTCTTCTTTCA+AGG 0.379151 4_1:+55226912 Msa0556970:CDS
GTCCATGTCCTTCACTAGAT+TGG 0.379697 4_1:-55226820 None:intergenic
ATCAGTATCTTAAATACTCT+TGG 0.387106 4_1:+55222388 Msa0556970:CDS
GAAAAGCTTGTAGTGGCATT+TGG 0.390200 4_1:-55222880 None:intergenic
ATAAAGTGAGTCCTTCAAAA+AGG 0.390264 4_1:+55222232 Msa0556970:CDS
GTGACTTTGTTGCTTCTACT+AGG 0.412930 4_1:-55222209 None:intergenic
CTAGTTGGTCATGTATATAT+AGG 0.413634 4_1:-55222051 None:intergenic
TCCTTGGTTCATTCCAATCC+CGG 0.414536 4_1:-55227066 None:intergenic
CTTGGTAAAGCACATGAATC+AGG 0.414998 4_1:-55222414 None:intergenic
TGTAGTCACTGGTGCCTACC+AGG 0.414998 4_1:+55227283 Msa0556970:CDS
CAAAATTAGTGCCAGATAAA+GGG 0.417130 4_1:-55222012 None:intergenic
GTAATTTGTTCTCTGGTAGT+TGG 0.418151 4_1:+55222274 Msa0556970:CDS
ATTGACCACTTGGGCTGGAT+GGG 0.420395 4_1:+55226866 Msa0556970:CDS
CTGTTCACTACATCAGCTTC+GGG 0.421709 4_1:-55227148 None:intergenic
ATGGAGAGGATTTCTTGAAT+AGG 0.422141 4_1:+55222770 Msa0556970:CDS
TTTGTATGTTATGTTCTAGT+TGG 0.425172 4_1:-55222066 None:intergenic
AGTGAAGGACATGGACCGTT+TGG 0.425551 4_1:+55226827 Msa0556970:CDS
TCGCTGCTACATGTCTTCCT+TGG 0.429020 4_1:-55227082 None:intergenic
TTATTGTGGTGTAGGTTCAA+TGG 0.429253 4_1:+55222751 Msa0556970:intron
AATAGTGAATTAGTAATATA+TGG 0.431325 4_1:-55221907 None:intergenic
TAATTTGTTCTCTGGTAGTT+GGG 0.435474 4_1:+55222275 Msa0556970:CDS
TACCAGGGCTGCCTGATACT+TGG 0.438313 4_1:+55227299 Msa0556970:CDS
AGCGAAGCTGAACCAGTACC+TGG 0.448190 4_1:+55227100 Msa0556970:CDS
TTGAATTTAGGGGCCGGGAT+TGG 0.451299 4_1:+55227053 Msa0556970:intron
TCTGTTCACTACATCAGCTT+CGG 0.452658 4_1:-55227149 None:intergenic
AGTTTGAGGGGTTTCATGGA+TGG 0.452668 4_1:-55221943 None:intergenic
AGTACCTGGGCCAAAATATC+CGG 0.461818 4_1:+55227114 Msa0556970:CDS
ATCAAATTGAGCTTCTAAGA+AGG 0.462973 4_1:-55222340 None:intergenic
CTCTCACAACTAAGAAAAGA+TGG 0.463426 4_1:+55227220 Msa0556970:CDS
TTTATAAGGGATTGACCACT+TGG 0.465985 4_1:+55226856 Msa0556970:CDS
TCCATGTCCTTCACTAGATT+GGG 0.466334 4_1:-55226819 None:intergenic
TGGTAAGGCATGGATTGATA+TGG 0.472637 4_1:+55226283 Msa0556970:CDS
AAGGGATTGACCACTTGGGC+TGG 0.475375 4_1:+55226861 Msa0556970:CDS
GATTGACCACTTGGGCTGGA+TGG 0.486358 4_1:+55226865 Msa0556970:CDS
GACATAATTCAGCAAGGTGT+TGG 0.489161 4_1:+55226230 Msa0556970:CDS
GCATGGACACAAGGAGAGCT+AGG 0.489260 4_1:-55222185 None:intergenic
TGATCCTTAGTATAGATAGA+AGG 0.491156 4_1:-55227247 None:intergenic
TGGTGTACGGTATAGTTGTA+TGG 0.491607 4_1:-55226198 None:intergenic
TTACTTACTGATAATGAGTA+GGG 0.493377 4_1:-55226941 None:intergenic
CCCTCAAAATAGGACAATAT+GGG 0.493998 4_1:+55222123 Msa0556970:exon
TCTCCTTGAATTTAGGGGCC+GGG 0.496773 4_1:+55227048 Msa0556970:intron
GTCTTGTATGATTCATGCAT+CGG 0.506970 4_1:+55222855 Msa0556970:CDS
GGATTTCTTGAATAGGTGGA+AGG 0.512981 4_1:+55222777 Msa0556970:CDS
GTTGAAGAACATGAAGAAGC+AGG 0.517556 4_1:+55227174 Msa0556970:CDS
ACATCCTTCTATCTATACTA+AGG 0.519367 4_1:+55227243 Msa0556970:CDS
CTTGAAGAATAGATCACAAA+GGG 0.522893 4_1:+55227406 Msa0556970:intron
ACCCTTGTGAATCTCCCTTG+TGG 0.528579 4_1:-55226340 None:intergenic
TTCCAAGTATCAGGCAGCCC+TGG 0.530331 4_1:-55227301 None:intergenic
TCTTCAACTCGTGGCATTGG+TGG 0.531876 4_1:+55226315 Msa0556970:CDS
CCATAAATGCTGGTAAGGCA+TGG 0.534524 4_1:+55226273 Msa0556970:CDS
GGACTCCATAAATGCTGGTA+AGG 0.535572 4_1:+55226268 Msa0556970:CDS
GTTACTTACTGATAATGAGT+AGG 0.541324 4_1:-55226942 None:intergenic
TGATCTTCAACTCGTGGCAT+TGG 0.543555 4_1:+55226312 Msa0556970:CDS
GAGAGGATTTCTTGAATAGG+TGG 0.550295 4_1:+55222773 Msa0556970:CDS
GGTATGGTTTGAAATTTAGA+GGG 0.551419 4_1:-55221872 None:intergenic
ATCTATACTAAGGATCATAC+AGG 0.552576 4_1:+55227253 Msa0556970:CDS
TGTTGCTTCTACTAGGTGCA+TGG 0.553240 4_1:-55222202 None:intergenic
CTACTAGGTGCATGGACACA+AGG 0.554276 4_1:-55222194 None:intergenic
TCAAATTGAGCTTCTAAGAA+GGG 0.554679 4_1:-55222339 None:intergenic
ATACCGTACACCATATTTGG+TGG 0.560969 4_1:+55226208 Msa0556970:CDS
CCTTATAAAATGCATCCAAA+CGG 0.562648 4_1:-55226842 None:intergenic
TTTCCTAGAAAAGCTTGTAG+TGG 0.565679 4_1:-55222887 None:intergenic
ACGCTGGACTCCATAAATGC+TGG 0.566630 4_1:+55226263 Msa0556970:CDS
GTGGTGTAGGTTCAATGGAG+AGG 0.569506 4_1:+55222756 Msa0556970:intron
ATTCATTGAGTCTAAACATG+TGG 0.578501 4_1:+55222824 Msa0556970:CDS
AATGGTACTACATTATTGAG+TGG 0.579297 4_1:-55221823 None:intergenic
AAGTATCAGGCAGCCCTGGT+AGG 0.585306 4_1:-55227297 None:intergenic
GATTTCTTGAATAGGTGGAA+GGG 0.587384 4_1:+55222778 Msa0556970:CDS
TGCCAGATAAAGGGTTCACA+TGG 0.587543 4_1:-55222003 None:intergenic
TAAAGGGTTCACATGGAGGA+TGG 0.595742 4_1:-55221996 None:intergenic
TGTCCACCAAATATGGTGTA+CGG 0.595920 4_1:-55226211 None:intergenic
GTGGCATTGGTGGACCCACA+AGG 0.596003 4_1:+55226325 Msa0556970:CDS
CTGATTCATGTGCTTTACCA+AGG 0.597601 4_1:+55222415 Msa0556970:CDS
CAGGCAATGACTGTAGTCAC+TGG 0.602552 4_1:+55227272 Msa0556970:CDS
GCTTCGGGAGGTAGAGCCGC+CGG 0.603426 4_1:-55227133 None:intergenic
CAAATTGAGCTTCTAAGAAG+GGG 0.603987 4_1:-55222338 None:intergenic
GAGCTAGGGCAAAGAAAGAG+AGG 0.604500 4_1:-55222170 None:intergenic
TTCATTGAGTCTAAACATGT+GGG 0.609808 4_1:+55222825 Msa0556970:CDS
GTAGTCACTGGTGCCTACCA+GGG 0.617965 4_1:+55227284 Msa0556970:CDS
CAGATAAAGGGTTCACATGG+AGG 0.617969 4_1:-55222000 None:intergenic
ATGGTGTCACATGTGAGGTA+TGG 0.619297 4_1:-55221888 None:intergenic
AGATGGTCCCAATCTAGTGA+AGG 0.621631 4_1:+55226812 Msa0556970:CDS
GCGAAGCTGAACCAGTACCT+GGG 0.622617 4_1:+55227101 Msa0556970:CDS
CATGGACACAAGGAGAGCTA+GGG 0.629898 4_1:-55222184 None:intergenic
TGTTGGTAGAGTGCTTACGC+TGG 0.631705 4_1:+55226247 Msa0556970:CDS
TTATAAGGGATTGACCACTT+GGG 0.640369 4_1:+55226857 Msa0556970:CDS
ATCAACCCATCCAGCCCAAG+TGG 0.643543 4_1:-55226871 None:intergenic
ACCCACAAGGGAGATTCACA+AGG 0.652804 4_1:+55226338 Msa0556970:CDS
ACCTGGGCCAAAATATCCGG+CGG 0.657712 4_1:+55227117 Msa0556970:CDS
AATATATGGTGTCACATGTG+AGG 0.659308 4_1:-55221893 None:intergenic
TCCCAATCTAGTGAAGGACA+TGG 0.660797 4_1:+55226818 Msa0556970:CDS
TCTTGAAGAATAGATCACAA+AGG 0.661536 4_1:+55227405 Msa0556970:intron
TTCACTACATCAGCTTCGGG+AGG 0.661560 4_1:-55227145 None:intergenic
ACATGTTGATCTTCAACTCG+TGG 0.664957 4_1:+55226306 Msa0556970:CDS
TTGGTGGACATAATTCAGCA+AGG 0.667272 4_1:+55226224 Msa0556970:CDS
CAGCTTGAAGAATCATAGAG+AGG 0.670610 4_1:-55222315 None:intergenic
TACTTACTGATAATGAGTAG+GGG 0.672320 4_1:-55226940 None:intergenic
GCCGGGATTGGAATGAACCA+AGG 0.674279 4_1:+55227065 Msa0556970:CDS
TGGCATTGGTGGACCCACAA+GGG 0.678903 4_1:+55226326 Msa0556970:CDS
CCCACAAGGGAGATTCACAA+GGG 0.747574 4_1:+55226339 Msa0556970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATAATAATAATAATA+TGG + chr4_1:55225593-55225612 Msa0556970:intron 0.0%
!! ATATAATAAAGAAAAAACAA+TGG - chr4_1:55223050-55223069 None:intergenic 10.0%
!! AACATATTATGAAATATAAT+TGG + chr4_1:55224306-55224325 Msa0556970:intron 10.0%
!! TATGAAATTTCAAATAATAT+TGG - chr4_1:55226106-55226125 None:intergenic 10.0%
!! AATAGTGAATTAGTAATATA+TGG - chr4_1:55221910-55221929 None:intergenic 15.0%
!! AAAAAAAAAAATCAATACCT+TGG - chr4_1:55222435-55222454 None:intergenic 15.0%
!! ATTATATTCACAAAATCATA+TGG - chr4_1:55222999-55223018 None:intergenic 15.0%
!!! TAATTTAACTTGTAAATAGA+GGG - chr4_1:55223109-55223128 None:intergenic 15.0%
!!! ATAATTTAACTTGTAAATAG+AGG - chr4_1:55223110-55223129 None:intergenic 15.0%
!! ATAGTTATATTGGAATATAA+AGG - chr4_1:55223202-55223221 None:intergenic 15.0%
!!! TAATCTTTATTTGAAAAGTT+GGG - chr4_1:55223972-55223991 None:intergenic 15.0%
!!! ATAATCTTTATTTGAAAAGT+TGG - chr4_1:55223973-55223992 None:intergenic 15.0%
!!! TTAATCAAGAGTTTTTATAT+AGG - chr4_1:55224069-55224088 None:intergenic 15.0%
!!! GAAATATAATTGGTTTAATT+AGG + chr4_1:55224316-55224335 Msa0556970:intron 15.0%
!! TAAATTGCATATTAAATTTG+AGG + chr4_1:55224632-55224651 Msa0556970:intron 15.0%
!! TAAATATTGTTTAACATGTT+TGG + chr4_1:55224655-55224674 Msa0556970:intron 15.0%
!! ATTTCAAAAAATTTGTCAAT+TGG + chr4_1:55224859-55224878 Msa0556970:intron 15.0%
!! TTTATTAGGTGAAAAAATTA+TGG + chr4_1:55224998-55225017 Msa0556970:intron 15.0%
!! TCTTAAAAAAGAAAAAAGTA+AGG + chr4_1:55226589-55226608 Msa0556970:intron 15.0%
!!! ATTTTCTTAATTGAGTTTGA+GGG - chr4_1:55221959-55221978 None:intergenic 20.0%
!!! AATTTTCTTAATTGAGTTTG+AGG - chr4_1:55221960-55221979 None:intergenic 20.0%
!! TTCATTATAATTACAAGTGT+CGG - chr4_1:55222567-55222586 None:intergenic 20.0%
!! TTTCAAATTATTAACTGTGT+CGG + chr4_1:55222598-55222617 Msa0556970:intron 20.0%
!! GTAATGAGTAATTATTATTG+TGG + chr4_1:55222737-55222756 Msa0556970:intron 20.0%
!! ATATTCCAATATAACTATAG+AGG + chr4_1:55223204-55223223 Msa0556970:intron 20.0%
!! AATTCCACGATATTTATAAA+TGG + chr4_1:55223830-55223849 Msa0556970:intron 20.0%
!! AAAAAAAACACTAATGATCA+TGG - chr4_1:55223924-55223943 None:intergenic 20.0%
!!! AATCTTTATTTGAAAAGTTG+GGG - chr4_1:55223971-55223990 None:intergenic 20.0%
!! AAAACTCTTGATTAAACTAA+AGG + chr4_1:55224074-55224093 Msa0556970:intron 20.0%
!! TGTAAAAACTCTCTATATTA+AGG - chr4_1:55224372-55224391 None:intergenic 20.0%
!! AAATGATCAAATTTAAGTGA+TGG + chr4_1:55224710-55224729 Msa0556970:intron 20.0%
!! TGGATAAGTTTATGATAATA+TGG + chr4_1:55224730-55224749 Msa0556970:intron 20.0%
!!! TTTTTGAAATTGTAAAGTGT+CGG - chr4_1:55224849-55224868 None:intergenic 20.0%
!! TATATCTTCATGGAAAAAAA+TGG - chr4_1:55225430-55225449 None:intergenic 20.0%
!! CTTATTCAAATATATCTTCA+TGG - chr4_1:55225440-55225459 None:intergenic 20.0%
!! AAATATAATTATGCACTATG+TGG - chr4_1:55225655-55225674 None:intergenic 20.0%
!!! TTTTGTATTTCTCTTTTTAG+TGG - chr4_1:55225699-55225718 None:intergenic 20.0%
!! AATAAACATAAACTGTTTGT+TGG - chr4_1:55225726-55225745 None:intergenic 20.0%
!!! GTAAGTCTTAAAGATTTTTT+TGG + chr4_1:55225842-55225861 Msa0556970:intron 20.0%
!!! GACTTTATTTTAAGTAGATA+AGG - chr4_1:55225917-55225936 None:intergenic 20.0%
!!! TTAGTGAAATTTTGTTTGTT+AGG + chr4_1:55226681-55226700 Msa0556970:intron 20.0%
! AAATTTAGAGGGTTGTTTAT+GGG - chr4_1:55221864-55221883 None:intergenic 25.0%
!! TTTTCTTAATTGAGTTTGAG+GGG - chr4_1:55221958-55221977 None:intergenic 25.0%
! TTTGTATGTTATGTTCTAGT+TGG - chr4_1:55222069-55222088 None:intergenic 25.0%
!! ATATTCTCTTTCACAGTTTT+TGG + chr4_1:55222099-55222118 Msa0556970:five_prime_UTR 25.0%
! AAGAGAGGAAAAACAATTTA+TGG - chr4_1:55222158-55222177 None:intergenic 25.0%
!! AATTGTTTTCTCCTTTTTGA+AGG - chr4_1:55222246-55222265 None:intergenic 25.0%
!!! AACAATTGTAATTTGTTCTC+TGG + chr4_1:55222267-55222286 Msa0556970:CDS 25.0%
! ATCAGTATCTTAAATACTCT+TGG + chr4_1:55222388-55222407 Msa0556970:CDS 25.0%
! AGTAATTATTATTGTGGTGT+AGG + chr4_1:55222743-55222762 Msa0556970:intron 25.0%
! GGTAAAAAGATAATGTTTGT+GGG + chr4_1:55222799-55222818 Msa0556970:CDS 25.0%
! TGAAAATTGAAGACATTCAT+GGG - chr4_1:55223025-55223044 None:intergenic 25.0%
! ATGAAAATTGAAGACATTCA+TGG - chr4_1:55223026-55223045 None:intergenic 25.0%
! TGAAGGAGTCAAATTAAATT+AGG + chr4_1:55223163-55223182 Msa0556970:intron 25.0%
! TTAAATTAGGATTTGATACC+AGG + chr4_1:55223176-55223195 Msa0556970:intron 25.0%
! TTAGTCCTCTATAGTTATAT+TGG - chr4_1:55223212-55223231 None:intergenic 25.0%
!!! AAGTGAGTTTTTCTTTTTCA+TGG - chr4_1:55223384-55223403 None:intergenic 25.0%
! CTTACATTGATATGATGATA+TGG + chr4_1:55223500-55223519 Msa0556970:intron 25.0%
! AACACAAATGTCTTTATAAG+TGG + chr4_1:55223523-55223542 Msa0556970:intron 25.0%
! TATAATCTCCACCTTATAAA+GGG + chr4_1:55223774-55223793 Msa0556970:intron 25.0%
!! GTTTTTATATAGGTACCTTA+TGG - chr4_1:55224059-55224078 None:intergenic 25.0%
! TCTTGATTAAACTAAAGGTT+AGG + chr4_1:55224079-55224098 Msa0556970:intron 25.0%
! TTAAACTAAAGGTTAGGTAA+AGG + chr4_1:55224085-55224104 Msa0556970:intron 25.0%
!! AGTTTAAAATTCCTAGTTGT+AGG - chr4_1:55224451-55224470 None:intergenic 25.0%
!! CTAGGAATTTTAAACTTCAA+AGG + chr4_1:55224455-55224474 Msa0556970:intron 25.0%
!! TCTACATGTTACAATTTTAG+AGG - chr4_1:55224568-55224587 None:intergenic 25.0%
! CTAAAATTGTAACATGTAGA+TGG + chr4_1:55224568-55224587 Msa0556970:intron 25.0%
! ATATGCAATTTAGTCTCTAA+TGG - chr4_1:55224624-55224643 None:intergenic 25.0%
!!! GAGTTGATATAATATCTATG+TGG + chr4_1:55224752-55224771 Msa0556970:intron 25.0%
!!! TCATAGCTTTTAAAGATAGA+AGG + chr4_1:55224804-55224823 Msa0556970:intron 25.0%
! ATTTGAAAAATGCTAATGCT+TGG + chr4_1:55225147-55225166 Msa0556970:intron 25.0%
!! TTTGGAATACACATAAATCA+CGG - chr4_1:55225216-55225235 None:intergenic 25.0%
! GAACAAAATAAAGTAGAATC+TGG + chr4_1:55225250-55225269 Msa0556970:intron 25.0%
! CTTGTTACATGTAAAATGAT+AGG + chr4_1:55225331-55225350 Msa0556970:intron 25.0%
!!! TGTTTATTCGTGTTGTTTTA+TGG + chr4_1:55225738-55225757 Msa0556970:intron 25.0%
!!! GTGTTGTTTTATGGAATAAA+AGG + chr4_1:55225747-55225766 Msa0556970:intron 25.0%
!!! TTGTTTTATGGAATAAAAGG+TGG + chr4_1:55225750-55225769 Msa0556970:intron 25.0%
!! TGTTTTATGGAATAAAAGGT+GGG + chr4_1:55225751-55225770 Msa0556970:intron 25.0%
! TAGTGATAAAGAATGACTAA+AGG - chr4_1:55226032-55226051 None:intergenic 25.0%
! TAATATTGGATACTTAGAAG+TGG - chr4_1:55226092-55226111 None:intergenic 25.0%
! ATCAGATAGTATTATTGTAG+AGG - chr4_1:55226373-55226392 None:intergenic 25.0%
!! TATCTGATTAGTTACTATAG+TGG + chr4_1:55226385-55226404 Msa0556970:intron 25.0%
! TTCATCATCAATTCAAACAT+AGG - chr4_1:55226431-55226450 None:intergenic 25.0%
!!! TGTAGTTTTGTGAAAATTAG+AGG + chr4_1:55226497-55226516 Msa0556970:intron 25.0%
!!! ATGATAGAGTTTTGTTTGTT+AGG + chr4_1:55226649-55226668 Msa0556970:intron 25.0%
! GTTTGAGTGAAAAAACAAAA+AGG - chr4_1:55226745-55226764 None:intergenic 25.0%
!! TTTTTCACTCAAACAATTGA+TGG + chr4_1:55226751-55226770 Msa0556970:intron 25.0%
!!! TTGAAAGAAGACTTTAGTTT+TGG - chr4_1:55226913-55226932 None:intergenic 25.0%
! AAAACTAAAGTCTTCTTTCA+AGG + chr4_1:55226912-55226931 Msa0556970:CDS 25.0%
!! TTACTTACTGATAATGAGTA+GGG - chr4_1:55226944-55226963 None:intergenic 25.0%
AATGGTACTACATTATTGAG+TGG - chr4_1:55221826-55221845 None:intergenic 30.0%
GGGAGAAATCAAAATCAAAA+TGG - chr4_1:55221844-55221863 None:intergenic 30.0%
GAAATTTAGAGGGTTGTTTA+TGG - chr4_1:55221865-55221884 None:intergenic 30.0%
! GGTATGGTTTGAAATTTAGA+GGG - chr4_1:55221875-55221894 None:intergenic 30.0%
! AGGTATGGTTTGAAATTTAG+AGG - chr4_1:55221876-55221895 None:intergenic 30.0%
CAAAATTAGTGCCAGATAAA+GGG - chr4_1:55222015-55222034 None:intergenic 30.0%
ACAAAATTAGTGCCAGATAA+AGG - chr4_1:55222016-55222035 None:intergenic 30.0%
CTAGTTGGTCATGTATATAT+AGG - chr4_1:55222054-55222073 None:intergenic 30.0%
ATAAAGTGAGTCCTTCAAAA+AGG + chr4_1:55222232-55222251 Msa0556970:CDS 30.0%
!! TAATTTGTTCTCTGGTAGTT+GGG + chr4_1:55222275-55222294 Msa0556970:CDS 30.0%
! TCAAATTGAGCTTCTAAGAA+GGG - chr4_1:55222342-55222361 None:intergenic 30.0%
! ATCAAATTGAGCTTCTAAGA+AGG - chr4_1:55222343-55222362 None:intergenic 30.0%
CAATTTGATTGCCAAAAGTT+TGG + chr4_1:55222354-55222373 Msa0556970:CDS 30.0%
! TATCAAGTCTTCCAAACTTT+TGG - chr4_1:55222368-55222387 None:intergenic 30.0%
GGGTAAAAAGATAATGTTTG+TGG + chr4_1:55222798-55222817 Msa0556970:CDS 30.0%
ATTCATTGAGTCTAAACATG+TGG + chr4_1:55222824-55222843 Msa0556970:CDS 30.0%
TTCATTGAGTCTAAACATGT+GGG + chr4_1:55222825-55222844 Msa0556970:CDS 30.0%
TATATTGGAATATAAAGGCC+TGG - chr4_1:55223197-55223216 None:intergenic 30.0%
TAATGAGTAGAGATTGTGAA+AGG + chr4_1:55223229-55223248 Msa0556970:intron 30.0%
ACAAATGTCTTTATAAGTGG+TGG + chr4_1:55223526-55223545 Msa0556970:intron 30.0%
! CCTTACAAAATCGACTTATA+AGG - chr4_1:55223562-55223581 None:intergenic 30.0%
!! CCTTATAAGTCGATTTTGTA+AGG + chr4_1:55223559-55223578 Msa0556970:intron 30.0%
GTATAATCTCCACCTTATAA+AGG + chr4_1:55223773-55223792 Msa0556970:intron 30.0%
ATAATCTCCACCTTATAAAG+GGG + chr4_1:55223775-55223794 Msa0556970:intron 30.0%
TCCACGATATTTATAAATGG+TGG + chr4_1:55223833-55223852 Msa0556970:intron 30.0%
CCACGATATTTATAAATGGT+GGG + chr4_1:55223834-55223853 Msa0556970:intron 30.0%
TAAAGGTTAGGTAAAGGATA+CGG + chr4_1:55224091-55224110 Msa0556970:intron 30.0%
TTTCACTCCATATGACATTA+TGG - chr4_1:55224117-55224136 None:intergenic 30.0%
ATATGGAGTGAAAGTCTTTA+CGG + chr4_1:55224124-55224143 Msa0556970:intron 30.0%
! AACTCACGTTCATTTTCATA+TGG + chr4_1:55224216-55224235 Msa0556970:intron 30.0%
TCATTTACTTGTCAACTTCA+AGG - chr4_1:55224696-55224715 None:intergenic 30.0%
TAGGTGAAAAAATTATGGCT+TGG + chr4_1:55225003-55225022 Msa0556970:intron 30.0%
GTGTATTCCAAACACAATAT+AGG + chr4_1:55225224-55225243 Msa0556970:intron 30.0%
GTTCAAACCTATATTGTGTT+TGG - chr4_1:55225234-55225253 None:intergenic 30.0%
TTGTAAATTGTTGTGATCAC+AGG - chr4_1:55225494-55225513 None:intergenic 30.0%
TGTTTAATCAACATCAGTCA+CGG + chr4_1:55225553-55225572 Msa0556970:intron 30.0%
TGAATTATGTCCACCAAATA+TGG - chr4_1:55226221-55226240 None:intergenic 30.0%
ATCATCAATTCAAACATAGG+TGG - chr4_1:55226428-55226447 None:intergenic 30.0%
ATCACGCTATAATGCATATT+TGG - chr4_1:55226547-55226566 None:intergenic 30.0%
TTAGGATTGTTCTGTGATTA+CGG + chr4_1:55226699-55226718 Msa0556970:intron 30.0%
AAAAGGAAAATGAATCAGTG+AGG - chr4_1:55226728-55226747 None:intergenic 30.0%
CCTTATAAAATGCATCCAAA+CGG - chr4_1:55226845-55226864 None:intergenic 30.0%
! CGTTTGGATGCATTTTATAA+GGG + chr4_1:55226843-55226862 Msa0556970:CDS 30.0%
!!! AGAAGACTTTAGTTTTGGTA+GGG - chr4_1:55226908-55226927 None:intergenic 30.0%
!!! AAGAAGACTTTAGTTTTGGT+AGG - chr4_1:55226909-55226928 None:intergenic 30.0%
! TACTTACTGATAATGAGTAG+GGG - chr4_1:55226943-55226962 None:intergenic 30.0%
! GTTACTTACTGATAATGAGT+AGG - chr4_1:55226945-55226964 None:intergenic 30.0%
TGACATGAATGAGCATATAT+AGG - chr4_1:55226969-55226988 None:intergenic 30.0%
ACATCCTTCTATCTATACTA+AGG + chr4_1:55227243-55227262 Msa0556970:CDS 30.0%
TGATCCTTAGTATAGATAGA+AGG - chr4_1:55227250-55227269 None:intergenic 30.0%
ATCTATACTAAGGATCATAC+AGG + chr4_1:55227253-55227272 Msa0556970:CDS 30.0%
TCTTGAAGAATAGATCACAA+AGG + chr4_1:55227405-55227424 Msa0556970:intron 30.0%
CTTGAAGAATAGATCACAAA+GGG + chr4_1:55227406-55227425 Msa0556970:intron 30.0%
!! AATATATGGTGTCACATGTG+AGG - chr4_1:55221896-55221915 None:intergenic 35.0%
!! AGTTTTTGGACCCTCAAAAT+AGG + chr4_1:55222113-55222132 Msa0556970:five_prime_UTR 35.0%
ACCCTCAAAATAGGACAATA+TGG + chr4_1:55222122-55222141 Msa0556970:exon 35.0%
!! CCCATATTGTCCTATTTTGA+GGG - chr4_1:55222126-55222145 None:intergenic 35.0%
CCCTCAAAATAGGACAATAT+GGG + chr4_1:55222123-55222142 Msa0556970:exon 35.0%
! ACCCATATTGTCCTATTTTG+AGG - chr4_1:55222127-55222146 None:intergenic 35.0%
!! GTAATTTGTTCTCTGGTAGT+TGG + chr4_1:55222274-55222293 Msa0556970:CDS 35.0%
! CAAATTGAGCTTCTAAGAAG+GGG - chr4_1:55222341-55222360 None:intergenic 35.0%
TTATTGTGGTGTAGGTTCAA+TGG + chr4_1:55222751-55222770 Msa0556970:intron 35.0%
ATGGAGAGGATTTCTTGAAT+AGG + chr4_1:55222770-55222789 Msa0556970:CDS 35.0%
GATTTCTTGAATAGGTGGAA+GGG + chr4_1:55222778-55222797 Msa0556970:CDS 35.0%
GTCTTGTATGATTCATGCAT+CGG + chr4_1:55222855-55222874 Msa0556970:CDS 35.0%
TTTCCTAGAAAAGCTTGTAG+TGG - chr4_1:55222890-55222909 None:intergenic 35.0%
! GTGATTTTCCAGGTAATAGT+TGG + chr4_1:55222925-55222944 Msa0556970:intron 35.0%
TAACTCTTAGTTGTGTTGTG+TGG + chr4_1:55223278-55223297 Msa0556970:intron 35.0%
AACTCTTAGTTGTGTTGTGT+GGG + chr4_1:55223279-55223298 Msa0556970:intron 35.0%
GTCACTGTTATCAGATTACT+CGG + chr4_1:55223655-55223674 Msa0556970:intron 35.0%
GTCAAATCATGAACGTTAAG+AGG + chr4_1:55223692-55223711 Msa0556970:intron 35.0%
TAATCTCCACCTTATAAAGG+GGG + chr4_1:55223776-55223795 Msa0556970:intron 35.0%
CCCACCATTTATAAATATCG+TGG - chr4_1:55223837-55223856 None:intergenic 35.0%
!!! TACTTGTTTTGCAAGAGTTG+AGG + chr4_1:55223873-55223892 Msa0556970:intron 35.0%
TTAACATGCTACGTACCATA+AGG + chr4_1:55224041-55224060 Msa0556970:intron 35.0%
! ACGTTCATTTTCATATGGAG+TGG + chr4_1:55224221-55224240 Msa0556970:intron 35.0%
! TCATTTTCATATGGAGTGGT+TGG + chr4_1:55224225-55224244 Msa0556970:intron 35.0%
!! ATGTTTGGATCTCAAGTTGA+CGG + chr4_1:55224670-55224689 Msa0556970:intron 35.0%
TTTAAAGATAGAAGGTAGCG+AGG + chr4_1:55224812-55224831 Msa0556970:intron 35.0%
CTTGGTATTGCTACTAGTAT+TGG + chr4_1:55225165-55225184 Msa0556970:intron 35.0%
! AAGTAGAATCTGGAATGAAG+CGG + chr4_1:55225260-55225279 Msa0556970:intron 35.0%
GAAGCGGGAAAAGTTAATTT+CGG + chr4_1:55225276-55225295 Msa0556970:intron 35.0%
AAATTGTTGTGATCACAGGT+TGG - chr4_1:55225490-55225509 None:intergenic 35.0%
GTTTAATCAACATCAGTCAC+GGG + chr4_1:55225554-55225573 Msa0556970:intron 35.0%
GTCTAATTTACGCTAAACTC+AGG - chr4_1:55225948-55225967 None:intergenic 35.0%
!! TTTCATTTTGAGTGGTTCAG+TGG - chr4_1:55226133-55226152 None:intergenic 35.0%
AACCACTCAAAATGAAACTG+TGG + chr4_1:55226136-55226155 Msa0556970:intron 35.0%
! TACCACAGTTTCATTTTGAG+TGG - chr4_1:55226141-55226160 None:intergenic 35.0%
ACTATACCGTACACCATATT+TGG + chr4_1:55226205-55226224 Msa0556970:CDS 35.0%
! CCGTTTGGATGCATTTTATA+AGG + chr4_1:55226842-55226861 Msa0556970:CDS 35.0%
TTTATAAGGGATTGACCACT+TGG + chr4_1:55226856-55226875 Msa0556970:CDS 35.0%
TTATAAGGGATTGACCACTT+GGG + chr4_1:55226857-55226876 Msa0556970:CDS 35.0%
CTCTCACAACTAAGAAAAGA+TGG + chr4_1:55227220-55227239 Msa0556970:CDS 35.0%
ACATTGTTAGAGCTGCATTT+AGG - chr4_1:55227333-55227352 None:intergenic 35.0%
ATTGAGTTTGAGGGGTTTCA+TGG - chr4_1:55221950-55221969 None:intergenic 40.0%
! GTGACTTTGTTGCTTCTACT+AGG - chr4_1:55222212-55222231 None:intergenic 40.0%
CAGCTTGAAGAATCATAGAG+AGG - chr4_1:55222318-55222337 None:intergenic 40.0%
CTTGGTAAAGCACATGAATC+AGG - chr4_1:55222417-55222436 None:intergenic 40.0%
CTGATTCATGTGCTTTACCA+AGG + chr4_1:55222415-55222434 Msa0556970:CDS 40.0%
ATTGTCAGTCCTATGAAGCA+CGG - chr4_1:55222659-55222678 None:intergenic 40.0%
GAGAGGATTTCTTGAATAGG+TGG + chr4_1:55222773-55222792 Msa0556970:CDS 40.0%
GGATTTCTTGAATAGGTGGA+AGG + chr4_1:55222777-55222796 Msa0556970:CDS 40.0%
GAAAAGCTTGTAGTGGCATT+TGG - chr4_1:55222883-55222902 None:intergenic 40.0%
! ATGCCACTACAAGCTTTTCT+AGG + chr4_1:55222884-55222903 Msa0556970:CDS 40.0%
! AGTGTCTACTGTGATTTTCC+AGG + chr4_1:55222915-55222934 Msa0556970:CDS 40.0%
CAACAAGACCAACTATTACC+TGG - chr4_1:55222936-55222955 None:intergenic 40.0%
CTATTGTGCCTCTTTCAGTT+AGG + chr4_1:55223633-55223652 Msa0556970:intron 40.0%
AACAGTGACCTAACTGAAAG+AGG - chr4_1:55223644-55223663 None:intergenic 40.0%
TCTTCCAAACCCCCTTTATA+AGG - chr4_1:55223788-55223807 None:intergenic 40.0%
GATACGGCCATAATGTCATA+TGG + chr4_1:55224107-55224126 Msa0556970:intron 40.0%
! GAAAGTCTTTACGGTGGATT+TGG + chr4_1:55224133-55224152 Msa0556970:intron 40.0%
! CGTGAGTTGTCTGATTTGAT+CGG - chr4_1:55224204-55224223 None:intergenic 40.0%
ATCCTCATGTCTCCTTTGTA+GGG - chr4_1:55224425-55224444 None:intergenic 40.0%
AATCCTCATGTCTCCTTTGT+AGG - chr4_1:55224426-55224445 None:intergenic 40.0%
ATGAGGATTCTCCTACAACT+AGG + chr4_1:55224437-55224456 Msa0556970:intron 40.0%
!! TTGTAAAGTGTCGGTCAAGA+TGG - chr4_1:55224840-55224859 None:intergenic 40.0%
! GAAATTCATGCAAGTGTCGT+TGG - chr4_1:55225060-55225079 None:intergenic 40.0%
GGAATACACATAAATCACGG+TGG - chr4_1:55225213-55225232 None:intergenic 40.0%
! AGTAGAATCTGGAATGAAGC+GGG + chr4_1:55225261-55225280 Msa0556970:intron 40.0%
ATAAGACTAGACAGTCTGTG+AGG + chr4_1:55225455-55225474 Msa0556970:intron 40.0%
TAAGACTAGACAGTCTGTGA+GGG + chr4_1:55225456-55225475 Msa0556970:intron 40.0%
ATGTGGCTTGACAACATATC+TGG - chr4_1:55225638-55225657 None:intergenic 40.0%
GACTTGTCGACATAAGTCTA+CGG - chr4_1:55225970-55225989 None:intergenic 40.0%
TGGTGTACGGTATAGTTGTA+TGG - chr4_1:55226201-55226220 None:intergenic 40.0%
ATACCGTACACCATATTTGG+TGG + chr4_1:55226208-55226227 Msa0556970:CDS 40.0%
TGTCCACCAAATATGGTGTA+CGG - chr4_1:55226214-55226233 None:intergenic 40.0%
! TTGGTGGACATAATTCAGCA+AGG + chr4_1:55226224-55226243 Msa0556970:CDS 40.0%
GACATAATTCAGCAAGGTGT+TGG + chr4_1:55226230-55226249 Msa0556970:CDS 40.0%
! TGGTAAGGCATGGATTGATA+TGG + chr4_1:55226283-55226302 Msa0556970:CDS 40.0%
ACATGTTGATCTTCAACTCG+TGG + chr4_1:55226306-55226325 Msa0556970:CDS 40.0%
TCCATGTCCTTCACTAGATT+GGG - chr4_1:55226822-55226841 None:intergenic 40.0%
!! AGTTTTGGTAGGGTCAACAT+TGG - chr4_1:55226898-55226917 None:intergenic 40.0%
TCCCCTTTCTCCTTGAATTT+AGG + chr4_1:55227041-55227060 Msa0556970:intron 40.0%
CCCTAAATTCAAGGAGAAAG+GGG - chr4_1:55227045-55227064 None:intergenic 40.0%
CCCCTTTCTCCTTGAATTTA+GGG + chr4_1:55227042-55227061 Msa0556970:intron 40.0%
CCCCTAAATTCAAGGAGAAA+GGG - chr4_1:55227046-55227065 None:intergenic 40.0%
CCCTTTCTCCTTGAATTTAG+GGG + chr4_1:55227043-55227062 Msa0556970:intron 40.0%
TCTGTTCACTACATCAGCTT+CGG - chr4_1:55227152-55227171 None:intergenic 40.0%
GTTGAAGAACATGAAGAAGC+AGG + chr4_1:55227174-55227193 Msa0556970:CDS 40.0%
! AGGAGTATGTTCCAAGTATC+AGG - chr4_1:55227313-55227332 None:intergenic 40.0%
!! ATGGTGTCACATGTGAGGTA+TGG - chr4_1:55221891-55221910 None:intergenic 45.0%
! AGGGGTTTCATGGATGGATT+AGG - chr4_1:55221940-55221959 None:intergenic 45.0%
AGTTTGAGGGGTTTCATGGA+TGG - chr4_1:55221946-55221965 None:intergenic 45.0%
TAAAGGGTTCACATGGAGGA+TGG - chr4_1:55221999-55222018 None:intergenic 45.0%
CAGATAAAGGGTTCACATGG+AGG - chr4_1:55222003-55222022 None:intergenic 45.0%
CTCCATGTGAACCCTTTATC+TGG + chr4_1:55222001-55222020 Msa0556970:five_prime_UTR 45.0%
TGCCAGATAAAGGGTTCACA+TGG - chr4_1:55222006-55222025 None:intergenic 45.0%
! TGTTGCTTCTACTAGGTGCA+TGG - chr4_1:55222205-55222224 None:intergenic 45.0%
TTCTCTGGTAGTTGGGTGAT+TGG + chr4_1:55222282-55222301 Msa0556970:CDS 45.0%
!! TACAAGTGTCGGTGTTGTGT+TGG - chr4_1:55222556-55222575 None:intergenic 45.0%
AGTCCTATGAAGCACGGATA+CGG - chr4_1:55222653-55222672 None:intergenic 45.0%
TTGTGTTGTGTGGGCAACTA+AGG + chr4_1:55223288-55223307 Msa0556970:intron 45.0%
TGTGTTGTGTGGGCAACTAA+GGG + chr4_1:55223289-55223308 Msa0556970:intron 45.0%
TCCACCTTATAAAGGGGGTT+TGG + chr4_1:55223781-55223800 Msa0556970:intron 45.0%
TCCAAACCCCCTTTATAAGG+TGG - chr4_1:55223785-55223804 None:intergenic 45.0%
TGGAGTGAAAGTCTTTACGG+TGG + chr4_1:55224127-55224146 Msa0556970:intron 45.0%
TCCTCATGTCTCCTTTGTAG+GGG - chr4_1:55224424-55224443 None:intergenic 45.0%
! GATACTTGATGATACTGCGC+AGG + chr4_1:55226163-55226182 Msa0556970:intron 45.0%
GGACTCCATAAATGCTGGTA+AGG + chr4_1:55226268-55226287 Msa0556970:CDS 45.0%
CCATGCCTTACCAGCATTTA+TGG - chr4_1:55226276-55226295 None:intergenic 45.0%
CCATAAATGCTGGTAAGGCA+TGG + chr4_1:55226273-55226292 Msa0556970:CDS 45.0%
TGATCTTCAACTCGTGGCAT+TGG + chr4_1:55226312-55226331 Msa0556970:CDS 45.0%
AGATGGTCCCAATCTAGTGA+AGG + chr4_1:55226812-55226831 Msa0556970:CDS 45.0%
TCCCAATCTAGTGAAGGACA+TGG + chr4_1:55226818-55226837 Msa0556970:CDS 45.0%
GTCCATGTCCTTCACTAGAT+TGG - chr4_1:55226823-55226842 None:intergenic 45.0%
GCCCCTAAATTCAAGGAGAA+AGG - chr4_1:55227047-55227066 None:intergenic 45.0%
TTCTCCTTGAATTTAGGGGC+CGG + chr4_1:55227047-55227066 Msa0556970:intron 45.0%
TCCTTGGTTCATTCCAATCC+CGG - chr4_1:55227069-55227088 None:intergenic 45.0%
AGTACCTGGGCCAAAATATC+CGG + chr4_1:55227114-55227133 Msa0556970:CDS 45.0%
CTGTTCACTACATCAGCTTC+GGG - chr4_1:55227151-55227170 None:intergenic 45.0%
!!! ACTTTTTTTAATTATTTATT+AGG + chr4_1:55224984-55225003 Msa0556970:intron 5.0%
!! TATTATTATATAATAACAAA+AGG - chr4_1:55225584-55225603 None:intergenic 5.0%
GAGCTAGGGCAAAGAAAGAG+AGG - chr4_1:55222173-55222192 None:intergenic 50.0%
CATGGACACAAGGAGAGCTA+GGG - chr4_1:55222187-55222206 None:intergenic 50.0%
CTACTAGGTGCATGGACACA+AGG - chr4_1:55222197-55222216 None:intergenic 50.0%
GCACGAACACTCCTGAGATT+AGG + chr4_1:55222495-55222514 Msa0556970:intron 50.0%
!! TGTCGGTGTTGTGTTGGTGT+CGG - chr4_1:55222550-55222569 None:intergenic 50.0%
ATGAAGCACGGATACGGACA+TGG - chr4_1:55222647-55222666 None:intergenic 50.0%
TGTCCGTATCCGTGCTTCAT+AGG + chr4_1:55222647-55222666 Msa0556970:intron 50.0%
GTGGTGTAGGTTCAATGGAG+AGG + chr4_1:55222756-55222775 Msa0556970:intron 50.0%
! TCGTGTCGATGAGCACTTGA+AGG + chr4_1:55223146-55223165 Msa0556970:intron 50.0%
GTGTTGTGTGGGCAACTAAG+GGG + chr4_1:55223290-55223309 Msa0556970:intron 50.0%
TGTTGTGTGGGCAACTAAGG+GGG + chr4_1:55223291-55223310 Msa0556970:intron 50.0%
CTCTTCGATCCGTGACTATG+GGG - chr4_1:55224178-55224197 None:intergenic 50.0%
GCTCTTCGATCCGTGACTAT+GGG - chr4_1:55224179-55224198 None:intergenic 50.0%
TGCTCTTCGATCCGTGACTA+TGG - chr4_1:55224180-55224199 None:intergenic 50.0%
TTCTCCTACCACCCCTACAA+AGG + chr4_1:55224410-55224429 Msa0556970:intron 50.0%
TCATGTCTCCTTTGTAGGGG+TGG - chr4_1:55224421-55224440 None:intergenic 50.0%
ACCCCTACAAAGGAGACATG+AGG + chr4_1:55224420-55224439 Msa0556970:intron 50.0%
GATGATACTGCGCAGGACTA+TGG + chr4_1:55226170-55226189 Msa0556970:intron 50.0%
! TGTTGGTAGAGTGCTTACGC+TGG + chr4_1:55226247-55226266 Msa0556970:CDS 50.0%
ACGCTGGACTCCATAAATGC+TGG + chr4_1:55226263-55226282 Msa0556970:CDS 50.0%
! TCTTCAACTCGTGGCATTGG+TGG + chr4_1:55226315-55226334 Msa0556970:CDS 50.0%
ACCCACAAGGGAGATTCACA+AGG + chr4_1:55226338-55226357 Msa0556970:CDS 50.0%
CCCTTGTGAATCTCCCTTGT+GGG - chr4_1:55226342-55226361 None:intergenic 50.0%
CCCACAAGGGAGATTCACAA+GGG + chr4_1:55226339-55226358 Msa0556970:CDS 50.0%
ACCCTTGTGAATCTCCCTTG+TGG - chr4_1:55226343-55226362 None:intergenic 50.0%
AGTGAAGGACATGGACCGTT+TGG + chr4_1:55226827-55226846 Msa0556970:CDS 50.0%
! ATTGACCACTTGGGCTGGAT+GGG + chr4_1:55226866-55226885 Msa0556970:CDS 50.0%
TCTCCTTGAATTTAGGGGCC+GGG + chr4_1:55227048-55227067 Msa0556970:intron 50.0%
AATCCCGGCCCCTAAATTCA+AGG - chr4_1:55227054-55227073 None:intergenic 50.0%
TTGAATTTAGGGGCCGGGAT+TGG + chr4_1:55227053-55227072 Msa0556970:intron 50.0%
TCGCTGCTACATGTCTTCCT+TGG - chr4_1:55227085-55227104 None:intergenic 50.0%
!!! GGATATTTTGGCCCAGGTAC+TGG - chr4_1:55227115-55227134 None:intergenic 50.0%
TTCACTACATCAGCTTCGGG+AGG - chr4_1:55227148-55227167 None:intergenic 50.0%
CAGGCAATGACTGTAGTCAC+TGG + chr4_1:55227272-55227291 Msa0556970:CDS 50.0%
GCATGGACACAAGGAGAGCT+AGG - chr4_1:55222188-55222207 None:intergenic 55.0%
TCCTGAGATTAGGCGTGCTC+CGG + chr4_1:55222505-55222524 Msa0556970:intron 55.0%
ACACGACACATGTCCGACAC+CGG - chr4_1:55222527-55222546 None:intergenic 55.0%
ACGGATACGGACATGGACAC+CGG - chr4_1:55222640-55222659 None:intergenic 55.0%
GTTGTGTGGGCAACTAAGGG+GGG + chr4_1:55223292-55223311 Msa0556970:intron 55.0%
TTGTGTGGGCAACTAAGGGG+GGG + chr4_1:55223293-55223312 Msa0556970:intron 55.0%
TCGATCCGTGACTATGGGGT+GGG - chr4_1:55224174-55224193 None:intergenic 55.0%
TTCGATCCGTGACTATGGGG+TGG - chr4_1:55224175-55224194 None:intergenic 55.0%
GTCTCCTTTGTAGGGGTGGT+AGG - chr4_1:55224417-55224436 None:intergenic 55.0%
CTAGACAGTCTGTGAGGGAG+AGG + chr4_1:55225461-55225480 Msa0556970:intron 55.0%
!! TGGCATTGGTGGACCCACAA+GGG + chr4_1:55226326-55226345 Msa0556970:CDS 55.0%
AAGGGATTGACCACTTGGGC+TGG + chr4_1:55226861-55226880 Msa0556970:CDS 55.0%
! GATTGACCACTTGGGCTGGA+TGG + chr4_1:55226865-55226884 Msa0556970:CDS 55.0%
ATCAACCCATCCAGCCCAAG+TGG - chr4_1:55226874-55226893 None:intergenic 55.0%
GCCGGGATTGGAATGAACCA+AGG + chr4_1:55227065-55227084 Msa0556970:CDS 55.0%
AGCGAAGCTGAACCAGTACC+TGG + chr4_1:55227100-55227119 Msa0556970:CDS 55.0%
GCGAAGCTGAACCAGTACCT+GGG + chr4_1:55227101-55227120 Msa0556970:CDS 55.0%
ACCTGGGCCAAAATATCCGG+CGG + chr4_1:55227117-55227136 Msa0556970:CDS 55.0%
! GGTAGAGCCGCCGGATATTT+TGG - chr4_1:55227127-55227146 None:intergenic 55.0%
TGTAGTCACTGGTGCCTACC+AGG + chr4_1:55227283-55227302 Msa0556970:CDS 55.0%
GTAGTCACTGGTGCCTACCA+GGG + chr4_1:55227284-55227303 Msa0556970:CDS 55.0%
AAGTATCAGGCAGCCCTGGT+AGG - chr4_1:55227300-55227319 None:intergenic 55.0%
TACCAGGGCTGCCTGATACT+TGG + chr4_1:55227299-55227318 Msa0556970:CDS 55.0%
TTCCAAGTATCAGGCAGCCC+TGG - chr4_1:55227304-55227323 None:intergenic 55.0%
ACCGGAGCACGCCTAATCTC+AGG - chr4_1:55222509-55222528 None:intergenic 60.0%
GATTAGGCGTGCTCCGGTGT+CGG + chr4_1:55222511-55222530 Msa0556970:intron 60.0%
CATGGACACCGGACACGACA+AGG - chr4_1:55222629-55222648 None:intergenic 60.0%
GTCTCCCCACCCCATAGTCA+CGG + chr4_1:55224166-55224185 Msa0556970:intron 60.0%
CGATCCGTGACTATGGGGTG+GGG - chr4_1:55224173-55224192 None:intergenic 60.0%
!! GTGGCATTGGTGGACCCACA+AGG + chr4_1:55226325-55226344 Msa0556970:CDS 60.0%
CGGCGTGTCCTTGTCGTGTC+CGG + chr4_1:55222618-55222637 Msa0556970:intron 65.0%
!!! GCCGCCGGATATTTTGGCCC+AGG - chr4_1:55227121-55227140 None:intergenic 65.0%
GCTTCGGGAGGTAGAGCCGC+CGG - chr4_1:55227136-55227155 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 55221796 55227520 55221796 ID=Msa0556970;Name=Msa0556970
chr4_1 mRNA 55221796 55227520 55221796 ID=Msa0556970-mRNA-1;Parent=Msa0556970;Name=Msa0556970-mRNA-1;_AED=0.14;_eAED=0.14;_QI=345|1|1|1|0.8|0.66|6|135|364
chr4_1 exon 55221796 55222436 55221796 ID=Msa0556970-mRNA-1:exon:16454;Parent=Msa0556970-mRNA-1
chr4_1 exon 55222765 55222936 55222765 ID=Msa0556970-mRNA-1:exon:16455;Parent=Msa0556970-mRNA-1
chr4_1 exon 55226185 55226360 55226185 ID=Msa0556970-mRNA-1:exon:16456;Parent=Msa0556970-mRNA-1
chr4_1 exon 55226797 55226955 55226797 ID=Msa0556970-mRNA-1:exon:16457;Parent=Msa0556970-mRNA-1
chr4_1 exon 55227063 55227381 55227063 ID=Msa0556970-mRNA-1:exon:16458;Parent=Msa0556970-mRNA-1
chr4_1 exon 55227413 55227520 55227413 ID=Msa0556970-mRNA-1:exon:16459;Parent=Msa0556970-mRNA-1
chr4_1 five_prime_UTR 55221796 55222140 55221796 ID=Msa0556970-mRNA-1:five_prime_utr;Parent=Msa0556970-mRNA-1
chr4_1 CDS 55222141 55222436 55222141 ID=Msa0556970-mRNA-1:cds;Parent=Msa0556970-mRNA-1
chr4_1 CDS 55222765 55222936 55222765 ID=Msa0556970-mRNA-1:cds;Parent=Msa0556970-mRNA-1
chr4_1 CDS 55226185 55226360 55226185 ID=Msa0556970-mRNA-1:cds;Parent=Msa0556970-mRNA-1
chr4_1 CDS 55226797 55226955 55226797 ID=Msa0556970-mRNA-1:cds;Parent=Msa0556970-mRNA-1
chr4_1 CDS 55227063 55227354 55227063 ID=Msa0556970-mRNA-1:cds;Parent=Msa0556970-mRNA-1
chr4_1 three_prime_UTR 55227355 55227381 55227355 ID=Msa0556970-mRNA-1:three_prime_utr;Parent=Msa0556970-mRNA-1
chr4_1 three_prime_UTR 55227413 55227520 55227413 ID=Msa0556970-mRNA-1:three_prime_utr;Parent=Msa0556970-mRNA-1
Gene Sequence

>Msa0556970

ATGGGTTTCAATGTCCATAAATTGTTTTTCCTCTCTTTCTTTGCCCTAGCTCTCCTTGTGTCCATGCACCTAGTAGAAGCAACAAAGTCACATAAAGTGAGTCCTTCAAAAAGGAGAAAACAATTAAACAATTGTAATTTGTTCTCTGGTAGTTGGGTGATTGGCTCTTCATATCCTCTCTATGATTCTTCAAGCTGCCCCTTCTTAGAAGCTCAATTTGATTGCCAAAAGTTTGGAAGACTTGATAATCAGTATCTTAAATACTCTTGGAAGCCTGATTCATGTGCTTTACCAAGGTTCAATGGAGAGGATTTCTTGAATAGGTGGAAGGGTAAAAAGATAATGTTTGTGGGTGATTCATTGAGTCTAAACATGTGGGAATCATTGTCTTGTATGATTCATGCATCGGTACCAAATGCCACTACAAGCTTTTCTAGGAAAGAATCAGTGTCTACTGTGATTTTCCAGGACTATGGAGTAACCATACAACTATACCGTACACCATATTTGGTGGACATAATTCAGCAAGGTGTTGGTAGAGTGCTTACGCTGGACTCCATAAATGCTGGTAAGGCATGGATTGATATGGACATGTTGATCTTCAACTCGTGGCATTGGTGGACCCACAAGGGAGATTCACAAGGCTGGGATTTTATTAAAGATGGTCCCAATCTAGTGAAGGACATGGACCGTTTGGATGCATTTTATAAGGGATTGACCACTTGGGCTGGATGGGTTGATGCCAATGTTGACCCTACCAAAACTAAAGTCTTCTTTCAAGGAATTTCCCCTACTCATTATCAGGGCCGGGATTGGAATGAACCAAGGAAGACATGTAGCAGCGAAGCTGAACCAGTACCTGGGCCAAAATATCCGGCGGCTCTACCTCCCGAAGCTGATGTAGTGAACAGAGTGTTGAAGAACATGAAGAAGCAGGTTTATCTTCTTGACATAACATTACTCTCACAACTAAGAAAAGATGGACATCCTTCTATCTATACTAAGGATCATACAGGCAATGACTGTAGTCACTGGTGCCTACCAGGGCTGCCTGATACTTGGAACATACTCCTAAATGCAGCTCTAACAATGTGA
Protein sequence

>Msa0556970

MGFNVHKLFFLSFFALALLVSMHLVEATKSHKVSPSKRRKQLNNCNLFSGSWVIGSSYPLYDSSSCPFLEAQFDCQKFGRLDNQYLKYSWKPDSCALPRFNGEDFLNRWKGKKIMFVGDSLSLNMWESLSCMIHASVPNATTSFSRKESVSTVIFQDYGVTIQLYRTPYLVDIIQQGVGRVLTLDSINAGKAWIDMDMLIFNSWHWWTHKGDSQGWDFIKDGPNLVKDMDRLDAFYKGLTTWAGWVDANVDPTKTKVFFQGISPTHYQGRDWNEPRKTCSSEAEPVPGPKYPAALPPEADVVNRVLKNMKKQVYLLDITLLSQLRKDGHPSIYTKDHTGNDCSHWCLPGLPDTWNILLNAALTM*