Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559420 | XP_003608336.2 | 83.750 | 560 | 41 | 4 | 1 | 542 | 1 | 528 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559420 | sp|Q9FLG8|SPNS2_ARATH | 62.305 | 512 | 149 | 7 | 25 | 533 | 13 | 483 | 0.0 | 623 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559420 | G7JTZ9 | 83.750 | 560 | 41 | 4 | 1 | 542 | 1 | 528 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0559420 | Msa0654520 | 0.818102 | 2.335724e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559420 | MtrunA17_Chr4g0049371 | 83.750 | 560 | 41 | 4 | 1 | 542 | 1 | 528 | 0.0 | 909 |
| Msa0559420 | MtrunA17_Chr2g0280091 | 63.372 | 516 | 119 | 6 | 28 | 517 | 1 | 472 | 0.0 | 629 |
| Msa0559420 | MtrunA17_Chr5g0411431 | 62.835 | 522 | 139 | 8 | 32 | 532 | 1 | 488 | 0.0 | 624 |
| Msa0559420 | MtrunA17_Chr2g0280101 | 69.302 | 215 | 31 | 2 | 63 | 274 | 1 | 183 | 6.91e-98 | 295 |
| Msa0559420 | MtrunA17_Chr2g0280111 | 58.904 | 219 | 36 | 3 | 329 | 542 | 46 | 215 | 7.84e-76 | 239 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559420 | AT5G64500.1 | 62.305 | 512 | 149 | 7 | 25 | 533 | 13 | 483 | 0.0 | 623 |
| Msa0559420 | AT2G22730.3 | 58.974 | 546 | 164 | 9 | 1 | 515 | 1 | 517 | 0.0 | 612 |
| Msa0559420 | AT2G22730.6 | 58.945 | 531 | 162 | 8 | 1 | 515 | 1 | 491 | 0.0 | 593 |
| Msa0559420 | AT2G22730.2 | 58.912 | 533 | 159 | 9 | 1 | 502 | 1 | 504 | 0.0 | 593 |
| Msa0559420 | AT2G22730.1 | 58.880 | 518 | 157 | 8 | 1 | 502 | 1 | 478 | 0.0 | 573 |
| Msa0559420 | AT5G65687.1 | 56.478 | 494 | 163 | 9 | 35 | 512 | 12 | 469 | 0.0 | 542 |
| Msa0559420 | AT2G22730.7 | 60.460 | 435 | 114 | 9 | 110 | 515 | 1 | 406 | 8.45e-172 | 493 |
| Msa0559420 | AT2G22730.5 | 54.860 | 463 | 149 | 10 | 1 | 432 | 1 | 434 | 1.24e-159 | 465 |
| Msa0559420 | AT2G22730.4 | 53.301 | 409 | 135 | 8 | 1 | 393 | 1 | 369 | 2.24e-133 | 393 |
Find 158 sgRNAs with CRISPR-Local
Find 572 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCCTTTCAAATGCATTTA+AGG | 0.012712 | 4_1:-58606464 | Msa0559420:intron |
| GTGGTCTTTCTTTCAATTTC+TGG | 0.022632 | 4_1:-58611271 | Msa0559420:CDS |
| GATGCTTCCATTTGCTATTT+TGG | 0.067366 | 4_1:-58609853 | Msa0559420:CDS |
| TCGATGGATTATCCTTTATT+TGG | 0.117987 | 4_1:+58613692 | None:intergenic |
| GTAAACCCCTTTAGACTTAT+TGG | 0.127810 | 4_1:-58611332 | Msa0559420:CDS |
| CCATGATTCCTGCAACTTCT+TGG | 0.194316 | 4_1:-58613143 | Msa0559420:CDS |
| AATATAATATTATATATTAT+TGG | 0.200897 | 4_1:-58613276 | Msa0559420:five_prime_UTR |
| TACAATTGTATGCGGAATAT+TGG | 0.202232 | 4_1:-58606527 | Msa0559420:CDS |
| AAACAGGTTGAAAGTCATTT+TGG | 0.209959 | 4_1:-58609909 | Msa0559420:intron |
| TATTATGTTGTGTAGGTTAC+TGG | 0.218193 | 4_1:-58612839 | Msa0559420:intron |
| ATGAAGCCTTTGCAGTTAAA+AGG | 0.237686 | 4_1:-58609822 | Msa0559420:intron |
| GTTGAAAGAAGAAGGTTTAT+TGG | 0.244387 | 4_1:+58613578 | None:intergenic |
| CTTCTTGGTTTACACCAAAA+AGG | 0.250484 | 4_1:-58613128 | Msa0559420:intron |
| ACTAATGCAGATATGATATT+TGG | 0.253804 | 4_1:-58606556 | Msa0559420:CDS |
| CATCGGTGCTTACTCGTATT+GGG | 0.254283 | 4_1:-58606772 | Msa0559420:CDS |
| GATTAACATGTTGAACTATT+TGG | 0.255328 | 4_1:-58612803 | Msa0559420:CDS |
| GCAGCTGCAATATGGTTTAT+TGG | 0.257585 | 4_1:-58605213 | Msa0559420:intron |
| TTTGAAAGAGATGCAAATAT+TGG | 0.266920 | 4_1:+58611877 | None:intergenic |
| TCATCGGTGCTTACTCGTAT+TGG | 0.285278 | 4_1:-58606773 | Msa0559420:CDS |
| TGGTTCTAACCTTCTTATAT+TGG | 0.290761 | 4_1:-58610503 | Msa0559420:CDS |
| GAAGAAGAGGTTGTTGTTGC+AGG | 0.290823 | 4_1:+58613222 | None:intergenic |
| GCAGGCTTCGGTTCATGTTC+AGG | 0.294635 | 4_1:+58613240 | None:intergenic |
| TTGGAGTTGGTTTGTCAGTT+TGG | 0.303308 | 4_1:-58611313 | Msa0559420:CDS |
| TATTAATTAAGAATAGAAAA+TGG | 0.303741 | 4_1:+58613528 | None:intergenic |
| TATATACTATAACCAGCTTT+GGG | 0.324548 | 4_1:+58606747 | None:intergenic |
| GTTCCTTCCGCGCCTCTTGT+TGG | 0.325321 | 4_1:-58605396 | Msa0559420:CDS |
| CGATGGATTATCCTTTATTT+GGG | 0.326229 | 4_1:+58613693 | None:intergenic |
| TCCTTTATTTGGGTAATGTA+TGG | 0.328422 | 4_1:+58613703 | None:intergenic |
| GTTAGAACCATGAAGAAAAT+AGG | 0.328479 | 4_1:+58610516 | None:intergenic |
| ATGTTTATGTTTCACCATCT+TGG | 0.336990 | 4_1:-58604511 | Msa0559420:three_prime_UTR |
| TTGGTTGGCGTTATGCGTTT+TGG | 0.340113 | 4_1:-58609890 | Msa0559420:CDS |
| ATAGCTAGCAATGGTGTTAA+TGG | 0.342905 | 4_1:-58612769 | Msa0559420:CDS |
| GGCAGTTGAGACAGTTCCTT+TGG | 0.344589 | 4_1:-58609687 | Msa0559420:CDS |
| ACAATTGTATGCGGAATATT+GGG | 0.345355 | 4_1:-58606526 | Msa0559420:CDS |
| TGCAGGAATCATGGTGGACT+TGG | 0.351959 | 4_1:+58613152 | None:intergenic |
| GTGGACTTGGGGACCATGTT+TGG | 0.362383 | 4_1:+58613165 | None:intergenic |
| TCCATACATTACCCAAATAA+AGG | 0.367294 | 4_1:-58613704 | Msa0559420:five_prime_UTR |
| ATATATACTATAACCAGCTT+TGG | 0.369080 | 4_1:+58606746 | None:intergenic |
| TACTTGAAGATATTACAAAA+AGG | 0.375676 | 4_1:+58604921 | None:intergenic |
| GAGGTTGTTGTTGCAGGCTT+CGG | 0.376470 | 4_1:+58613228 | None:intergenic |
| CATCAAAAGATATTACAAAA+AGG | 0.379177 | 4_1:+58604688 | None:intergenic |
| CCAACTCCAATAAGTCTAAA+GGG | 0.388229 | 4_1:+58611326 | None:intergenic |
| TGTTTATGTTTCACCATCTT+GGG | 0.390266 | 4_1:-58604510 | Msa0559420:three_prime_UTR |
| GGTGTAAACCAAGAAGTTGC+AGG | 0.391820 | 4_1:+58613135 | None:intergenic |
| GGAATATTGGGCACTTTAGC+AGG | 0.393766 | 4_1:-58606514 | Msa0559420:CDS |
| ACTATGTAAATCAAGGATAA+AGG | 0.394707 | 4_1:+58608843 | None:intergenic |
| GTCAAACTATAATAATATAA+TGG | 0.400192 | 4_1:-58613487 | Msa0559420:intron |
| ACTGTAGCTATTCATATATT+CGG | 0.404341 | 4_1:-58605423 | Msa0559420:CDS |
| TATGCAATTGGCTATGTATA+TGG | 0.405101 | 4_1:-58610424 | Msa0559420:CDS |
| GCCTCTTGTTGGAGTTGTCC+AGG | 0.411072 | 4_1:-58605385 | Msa0559420:intron |
| GGTTAACCTTCTTGGGATTG+AGG | 0.418224 | 4_1:+58604942 | None:intergenic |
| CTCTCTAGGCTCGTTGGTGT+TGG | 0.418538 | 4_1:-58611107 | Msa0559420:intron |
| TTCGCATTCAAAAGCATGTA+TGG | 0.429280 | 4_1:-58606140 | Msa0559420:CDS |
| ACAGTTCCTTTGGGTGTTCA+AGG | 0.430551 | 4_1:-58609677 | Msa0559420:intron |
| CATCATGTATCAAATGTAGA+AGG | 0.434075 | 4_1:-58605005 | Msa0559420:CDS |
| ATTCCTTCTTATATATTACT+AGG | 0.434272 | 4_1:+58613782 | None:intergenic |
| AACCTTAAATGCATTTGAAA+GGG | 0.436469 | 4_1:+58606462 | None:intergenic |
| CCCTTTAGACTTATTGGAGT+TGG | 0.436783 | 4_1:-58611326 | Msa0559420:CDS |
| GGTTCCACAGAAGAAGGAAC+AGG | 0.437634 | 4_1:+58613186 | None:intergenic |
| CTCTTCAAGCAATGGTGTTG+TGG | 0.437803 | 4_1:+58604897 | None:intergenic |
| ATTGATAGTGGCCTCAAACT+TGG | 0.439716 | 4_1:+58605456 | None:intergenic |
| TTTATCCTTGATTTACATAG+TGG | 0.442345 | 4_1:-58608841 | Msa0559420:intron |
| ATTTAAATTCGCATACGATT+GGG | 0.442457 | 4_1:+58613745 | None:intergenic |
| AAGTAACAAACCTGTGAAGC+TGG | 0.442495 | 4_1:+58611035 | None:intergenic |
| TACAGGATCATATTAACAAC+TGG | 0.443836 | 4_1:-58605275 | Msa0559420:intron |
| ACAGAAGAAGGAACAGGGTT+AGG | 0.448148 | 4_1:+58613192 | None:intergenic |
| TATTTAAATTCGCATACGAT+TGG | 0.449601 | 4_1:+58613744 | None:intergenic |
| ACCAACTCCAATAAGTCTAA+AGG | 0.458930 | 4_1:+58611325 | None:intergenic |
| ATAAATCCCAAAATAGCAAA+TGG | 0.464840 | 4_1:+58609846 | None:intergenic |
| GGTATCTGCAAGTCTGGAAC+AGG | 0.465998 | 4_1:-58612724 | Msa0559420:CDS |
| ATAAACCATATTGCAGCTGC+TGG | 0.467805 | 4_1:+58605216 | None:intergenic |
| CCAAGAAGTTGCAGGAATCA+TGG | 0.472191 | 4_1:+58613143 | None:intergenic |
| TTCTTCTGTGGAACCAAACA+TGG | 0.472300 | 4_1:-58613178 | Msa0559420:CDS |
| TATATGTTTGTATATGCAAT+CGG | 0.472667 | 4_1:-58604829 | Msa0559420:three_prime_UTR |
| GCAGTTGAGACAGTTCCTTT+GGG | 0.473811 | 4_1:-58609686 | Msa0559420:CDS |
| CAAGCCAGGTTGAAAGAAGA+AGG | 0.474374 | 4_1:+58613570 | None:intergenic |
| CCTGTCTTCTCTTCAAGCAA+TGG | 0.474940 | 4_1:+58604889 | None:intergenic |
| ATGTTTGGTTCCACAGAAGA+AGG | 0.476750 | 4_1:+58613180 | None:intergenic |
| AAAGTGCTGGACACACGTTT+AGG | 0.477991 | 4_1:-58604806 | Msa0559420:three_prime_UTR |
| TCGTATTGGGGCCCCAAAGC+TGG | 0.481238 | 4_1:-58606759 | Msa0559420:CDS |
| CTTATTCTCTCTAGGCTCGT+TGG | 0.482973 | 4_1:-58611113 | Msa0559420:intron |
| AAGTTTGAGGCCACTATCAA+TGG | 0.484428 | 4_1:-58605454 | Msa0559420:CDS |
| TGATAACGCCCCAGCTTCAC+AGG | 0.486992 | 4_1:-58611045 | Msa0559420:intron |
| TAACCCTGTTCCTTCTTCTG+TGG | 0.487886 | 4_1:-58613190 | Msa0559420:CDS |
| CAACCTTAAATGCATTTGAA+AGG | 0.497009 | 4_1:+58606461 | None:intergenic |
| GTAGACATAGCCATTGATAG+TGG | 0.500369 | 4_1:+58605444 | None:intergenic |
| TTCTTGGGATTGAGGTTCTG+TGG | 0.502530 | 4_1:+58604950 | None:intergenic |
| CAAGAGAGTTTCGAAGCTGC+GGG | 0.504016 | 4_1:-58613619 | Msa0559420:five_prime_UTR |
| AATCCTAGTAATATATAAGA+AGG | 0.504464 | 4_1:-58613785 | None:intergenic |
| GATAAAGGTGAAGTTCTCAC+TGG | 0.504668 | 4_1:+58608858 | None:intergenic |
| GCAGGAATCATGGTGGACTT+GGG | 0.506217 | 4_1:+58613153 | None:intergenic |
| ACTGATGGTATCTGCAAGTC+TGG | 0.512923 | 4_1:-58612730 | Msa0559420:CDS |
| AGAAACCACTATGTAAATCA+AGG | 0.513150 | 4_1:+58608836 | None:intergenic |
| ATACCAGGCGGATATGCAAT+TGG | 0.513392 | 4_1:-58610436 | Msa0559420:CDS |
| GAATAGAAAATGGAGGTTGA+AGG | 0.518725 | 4_1:+58613538 | None:intergenic |
| GTTAGGTGTTGAAGAAGAAG+AGG | 0.523107 | 4_1:+58613209 | None:intergenic |
| AATATTATATATTATTGGAA+TGG | 0.524557 | 4_1:-58613271 | Msa0559420:exon |
| TAAACCTTCTTCTTTCAACC+TGG | 0.526790 | 4_1:-58613574 | Msa0559420:five_prime_UTR |
| AGTAACAAACCTGTGAAGCT+GGG | 0.527094 | 4_1:+58611036 | None:intergenic |
| CTCTTCAAGCAACGGCGCAG+TGG | 0.528433 | 4_1:+58604977 | None:intergenic |
| CTCTCATTGACAACATTAGT+CGG | 0.535284 | 4_1:-58606185 | Msa0559420:CDS |
| AATGCAGATATGATATTTGG+AGG | 0.536029 | 4_1:-58606553 | Msa0559420:CDS |
| ATGGAGACATACATAATTCA+CGG | 0.540315 | 4_1:+58605488 | None:intergenic |
| TTACATGCGACATAATGTAA+TGG | 0.544368 | 4_1:+58611247 | None:intergenic |
| CAAAGTGACGAGGATGTCGA+TGG | 0.546812 | 4_1:+58613676 | None:intergenic |
| GAAGGTAACAAAAGCAAGCC+AGG | 0.547922 | 4_1:+58613556 | None:intergenic |
| CATTGCTAGCTATTGCTCCT+CGG | 0.549808 | 4_1:+58612779 | None:intergenic |
| CATCGTGGGACTTGCACTGA+TGG | 0.553260 | 4_1:-58612745 | Msa0559420:CDS |
| GATACATAGCCAATATAAGA+AGG | 0.558356 | 4_1:+58610494 | None:intergenic |
| GTTCTTGTTGACAACGATGT+TGG | 0.559911 | 4_1:+58613647 | None:intergenic |
| ACTCCAACAAGAGGCGCGGA+AGG | 0.560727 | 4_1:+58605393 | None:intergenic |
| CAGGAATCATGGTGGACTTG+GGG | 0.564970 | 4_1:+58613154 | None:intergenic |
| TAGCCAATTGCATATCCGCC+TGG | 0.566626 | 4_1:+58610433 | None:intergenic |
| ATCGGTGCTTACTCGTATTG+GGG | 0.576291 | 4_1:-58606771 | Msa0559420:CDS |
| ACAAGAGAGTTTCGAAGCTG+CGG | 0.577938 | 4_1:-58613620 | Msa0559420:five_prime_UTR |
| TTTACATGATGTGCCCAAGA+TGG | 0.580075 | 4_1:+58604497 | None:intergenic |
| GTGGTCTTCTCTTCAAGCAA+CGG | 0.580270 | 4_1:+58604969 | None:intergenic |
| ATAGCATACAACTTTGTCAT+CGG | 0.582605 | 4_1:-58606789 | Msa0559420:CDS |
| TATTTGCATCTCTTTCAAAG+AGG | 0.593085 | 4_1:-58611873 | Msa0559420:intron |
| TAATTAAGAATAGAAAATGG+AGG | 0.599413 | 4_1:+58613531 | None:intergenic |
| AGGTGAAGTTCTCACTGGGA+AGG | 0.601682 | 4_1:+58608863 | None:intergenic |
| TATATGCAATCGGAAAGTGC+TGG | 0.605386 | 4_1:-58604819 | Msa0559420:three_prime_UTR |
| ATTGTGTTAAGCCAAGTTTG+AGG | 0.607042 | 4_1:-58605467 | Msa0559420:CDS |
| TAGGCTCGTTGGTGTTGGCG+AGG | 0.608838 | 4_1:-58611102 | Msa0559420:CDS |
| ATATACTATAACCAGCTTTG+GGG | 0.609629 | 4_1:+58606748 | None:intergenic |
| ACTGTTGCAACCTTGTGCTG+TGG | 0.609919 | 4_1:-58611290 | Msa0559420:CDS |
| GGAGGAATTACAATTGTATG+CGG | 0.612364 | 4_1:-58606535 | Msa0559420:CDS |
| TGGAGACATACATAATTCAC+GGG | 0.613940 | 4_1:+58605489 | None:intergenic |
| GAAAGAAAGACCACAGCACA+AGG | 0.614167 | 4_1:+58611280 | None:intergenic |
| ATAAAGGTGAAGTTCTCACT+GGG | 0.624293 | 4_1:+58608859 | None:intergenic |
| GTAACAAACCTGTGAAGCTG+GGG | 0.624884 | 4_1:+58611037 | None:intergenic |
| ACCTGGACAACTCCAACAAG+AGG | 0.626399 | 4_1:+58605384 | None:intergenic |
| CGAGGAGCAATAGCTAGCAA+TGG | 0.629263 | 4_1:-58612778 | Msa0559420:CDS |
| CAACTCCAATAAGTCTAAAG+GGG | 0.634988 | 4_1:+58611327 | None:intergenic |
| TCAAACTTGGCTTAACACAA+TGG | 0.635878 | 4_1:+58605469 | None:intergenic |
| CCATTGCTTGAAGAGAAGAC+AGG | 0.637021 | 4_1:-58604889 | Msa0559420:three_prime_UTR |
| ATATTGGGCACTTTAGCAGG+AGG | 0.639746 | 4_1:-58606511 | Msa0559420:CDS |
| TAGTCATGTAATCAAGAACA+AGG | 0.644078 | 4_1:+58606488 | None:intergenic |
| ACAGAACCTCAATCCCAAGA+AGG | 0.644104 | 4_1:-58604948 | Msa0559420:CDS |
| GGGGCGTTATCATCAATGAA+AGG | 0.644741 | 4_1:+58611056 | None:intergenic |
| ATAGTACCTTGAACACCCAA+AGG | 0.648920 | 4_1:+58609671 | None:intergenic |
| TGGTTATAGTATATATAACA+TGG | 0.649082 | 4_1:-58606739 | Msa0559420:intron |
| GACAACTCCAACAAGAGGCG+CGG | 0.651802 | 4_1:+58605389 | None:intergenic |
| GTTCCACAGAAGAAGGAACA+GGG | 0.666132 | 4_1:+58613187 | None:intergenic |
| AGAGAGTTTCGAAGCTGCGG+GGG | 0.670617 | 4_1:-58613617 | Msa0559420:five_prime_UTR |
| AATGGTGTTAATGGACATCG+TGG | 0.671660 | 4_1:-58612760 | Msa0559420:CDS |
| AAGAGAGTTTCGAAGCTGCG+GGG | 0.678233 | 4_1:-58613618 | Msa0559420:five_prime_UTR |
| TGGCTATGTATATGGTGGAG+TGG | 0.682859 | 4_1:-58610416 | Msa0559420:intron |
| ATGTTGAACTATTTGGACCG+AGG | 0.689226 | 4_1:-58612796 | Msa0559420:CDS |
| GCAATTGGCTATGTATATGG+TGG | 0.689730 | 4_1:-58610421 | Msa0559420:CDS |
| TCATTGACAACATTAGTCGG+TGG | 0.705421 | 4_1:-58606182 | Msa0559420:CDS |
| AGAAGTTGCAGGAATCATGG+TGG | 0.707926 | 4_1:+58613146 | None:intergenic |
| ATGGTGTTAATGGACATCGT+GGG | 0.736621 | 4_1:-58612759 | Msa0559420:CDS |
| AGAGAAGGGAAGTACCTGAG+TGG | 0.742971 | 4_1:+58606076 | None:intergenic |
| AATGTACGAAACAAACTACG+TGG | 0.765297 | 4_1:+58604660 | None:intergenic |
| TTGGTGTCGTCAAAGTGACG+AGG | 0.769150 | 4_1:+58613666 | None:intergenic |
| TATTGTTGTTAGAATCAACG+CGG | 0.775609 | 4_1:+58605245 | None:intergenic |
| CTATGTATCAGAAAACAGTG+TGG | 0.787200 | 4_1:-58610480 | Msa0559420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATATTATATTATATTA+GGG | + | chr4_1:58604964-58604983 | None:intergenic | 0.0% |
| !! | ATATAATATTATATTATATT+AGG | + | chr4_1:58604965-58604984 | None:intergenic | 0.0% |
| !! | AATATAATATTATATATTAT+TGG | - | chr4_1:58604970-58604989 | Msa0559420:CDS | 0.0% |
| !! | TATTAATTAAGAATAGAAAA+TGG | + | chr4_1:58604721-58604740 | None:intergenic | 10.0% |
| !! | AATATTATATATTATTGGAA+TGG | - | chr4_1:58604975-58604994 | Msa0559420:CDS | 10.0% |
| !!! | AATTTTGAATTTTTTTGATT+TGG | - | chr4_1:58605208-58605227 | Msa0559420:intron | 10.0% |
| !!! | ATTTTGAATTTTTTTGATTT+GGG | - | chr4_1:58605209-58605228 | Msa0559420:intron | 10.0% |
| !!! | CTTAAATTTTATAAAAAGTA+GGG | + | chr4_1:58606760-58606779 | None:intergenic | 10.0% |
| !!! | ACTTAAATTTTATAAAAAGT+AGG | + | chr4_1:58606761-58606780 | None:intergenic | 10.0% |
| !!! | TTGGAATATTTTATATTATA+TGG | - | chr4_1:58607693-58607712 | Msa0559420:intron | 10.0% |
| !!! | TTTTGAAAACTAAAAAAAAA+AGG | - | chr4_1:58607951-58607970 | Msa0559420:intron | 10.0% |
| !! | TTTGAAAACTAAAAAAAAAA+GGG | - | chr4_1:58607952-58607971 | Msa0559420:intron | 10.0% |
| !!! | TTTTAAATTATATTTCAAGT+GGG | + | chr4_1:58608640-58608659 | None:intergenic | 10.0% |
| !!! | ATTTTAAATTATATTTCAAG+TGG | + | chr4_1:58608641-58608660 | None:intergenic | 10.0% |
| !! | AATTAAATAAATATGAAGAA+AGG | + | chr4_1:58611274-58611293 | None:intergenic | 10.0% |
| !! | ATTGAATATTTAAATAAGTT+AGG | - | chr4_1:58611892-58611911 | Msa0559420:CDS | 10.0% |
| !! | GTCAAACTATAATAATATAA+TGG | - | chr4_1:58604759-58604778 | Msa0559420:three_prime_UTR | 15.0% |
| !!! | TATAAGTTTTGAAGTTTTTA+AGG | - | chr4_1:58604859-58604878 | Msa0559420:three_prime_UTR | 15.0% |
| !!! | TTTCAACGTTTTTTTTTAAA+CGG | + | chr4_1:58605180-58605199 | None:intergenic | 15.0% |
| !! | TAATGTAGATTAAAATTAAC+TGG | - | chr4_1:58605338-58605357 | Msa0559420:intron | 15.0% |
| !!! | TTTTTTTTATTATGTTGTGT+AGG | - | chr4_1:58605400-58605419 | Msa0559420:CDS | 15.0% |
| !! | TTGAATTATTGAATAAGTTT+AGG | - | chr4_1:58605598-58605617 | Msa0559420:intron | 15.0% |
| !! | TAGTTAAGTTATTACTTTAA+TGG | - | chr4_1:58605745-58605764 | Msa0559420:intron | 15.0% |
| !! | CATAAAACTTGAAAAATAAT+CGG | + | chr4_1:58607034-58607053 | None:intergenic | 15.0% |
| !! | GAGAATAAGAAAAAAAATAA+GGG | + | chr4_1:58607122-58607141 | None:intergenic | 15.0% |
| !! | AGAGAATAAGAAAAAAAATA+AGG | + | chr4_1:58607123-58607142 | None:intergenic | 15.0% |
| !! | GAAAGATAAAAAAGTAAAAT+AGG | - | chr4_1:58607900-58607919 | Msa0559420:intron | 15.0% |
| !!! | TTTAAATTATATTTCAAGTG+GGG | + | chr4_1:58608639-58608658 | None:intergenic | 15.0% |
| !!! | ATTGTTGATAGAAAATTATT+TGG | + | chr4_1:58608992-58609011 | None:intergenic | 15.0% |
| !!! | ATAATTTTCTATCAACAATT+AGG | - | chr4_1:58608993-58609012 | Msa0559420:intron | 15.0% |
| !!! | AAATAACATAATTTTTCTCT+AGG | - | chr4_1:58609196-58609215 | Msa0559420:intron | 15.0% |
| !!! | ATGTTAGGTTTTTATTTTAT+TGG | - | chr4_1:58609259-58609278 | Msa0559420:intron | 15.0% |
| !! | AGGTATTAAAAATTGTAAAT+TGG | + | chr4_1:58611141-58611160 | None:intergenic | 15.0% |
| !! | GTAAAAAATAGTTCATATAT+AGG | + | chr4_1:58611375-58611394 | None:intergenic | 15.0% |
| !! | AATTTAAAAAATTACGAATG+AGG | - | chr4_1:58612589-58612608 | Msa0559420:intron | 15.0% |
| !! | TAATTAAGAATAGAAAATGG+AGG | + | chr4_1:58604718-58604737 | None:intergenic | 20.0% |
| !!! | ATTTGGGTATTTATTTTTGA+GGG | - | chr4_1:58605225-58605244 | Msa0559420:CDS | 20.0% |
| !!! | TTTCCCTAATTTCATTTTAT+TGG | - | chr4_1:58605273-58605292 | Msa0559420:CDS | 20.0% |
| !! | CAACCAATAAAATGAAATTA+GGG | + | chr4_1:58605279-58605298 | None:intergenic | 20.0% |
| !! | ACAACCAATAAAATGAAATT+AGG | + | chr4_1:58605280-58605299 | None:intergenic | 20.0% |
| !!! | TAATTTCATTTTATTGGTTG+TGG | - | chr4_1:58605279-58605298 | Msa0559420:intron | 20.0% |
| !!! | AATTTCATTTTATTGGTTGT+GGG | - | chr4_1:58605280-58605299 | Msa0559420:intron | 20.0% |
| !!! | AGATTGCATTTTTAATTAAC+AGG | + | chr4_1:58605715-58605734 | None:intergenic | 20.0% |
| !! | GTTAATTAAAAATGCAATCT+TGG | - | chr4_1:58605715-58605734 | Msa0559420:intron | 20.0% |
| !! | TTATTACTTTAATGGAAGAA+GGG | - | chr4_1:58605753-58605772 | Msa0559420:intron | 20.0% |
| !!! | TAAATATGTTTTCCCATTTT+GGG | - | chr4_1:58605799-58605818 | Msa0559420:intron | 20.0% |
| !! | TTCAATCATAAACCATATAT+TGG | + | chr4_1:58605963-58605982 | None:intergenic | 20.0% |
| !! | TAGATAGATAGTTCAATTTA+TGG | - | chr4_1:58606063-58606082 | Msa0559420:intron | 20.0% |
| !!! | AACAGTTATTTCAACATAAA+CGG | + | chr4_1:58606405-58606424 | None:intergenic | 20.0% |
| !!! | TTTATTTAAGGTATCATTGT+GGG | + | chr4_1:58606437-58606456 | None:intergenic | 20.0% |
| !!! | ATTTATTTAAGGTATCATTG+TGG | + | chr4_1:58606438-58606457 | None:intergenic | 20.0% |
| !!! | AAATTTTATAAAAAGTAGGG+CGG | + | chr4_1:58606757-58606776 | None:intergenic | 20.0% |
| !! | ATATAGATAGATCACATAAA+TGG | + | chr4_1:58606851-58606870 | None:intergenic | 20.0% |
| !!! | CGATTATTTTTCAAGTTTTA+TGG | - | chr4_1:58607032-58607051 | Msa0559420:intron | 20.0% |
| !! | GAAAAAATAAGAATATCAGA+TGG | + | chr4_1:58607100-58607119 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTATTCTCTCT+AGG | - | chr4_1:58607125-58607144 | Msa0559420:intron | 20.0% |
| !! | TTAATTATGATACCTTCATT+GGG | - | chr4_1:58607379-58607398 | Msa0559420:intron | 20.0% |
| !! | AAATAGTCTCACAATTTAAA+AGG | + | chr4_1:58607414-58607433 | None:intergenic | 20.0% |
| !! | TATTATAACTCAAATCACTA+TGG | - | chr4_1:58607563-58607582 | Msa0559420:intron | 20.0% |
| !!! | AATGTTTTGTAGATATAATC+TGG | - | chr4_1:58607635-58607654 | Msa0559420:intron | 20.0% |
| !! | AGATAAGAAATATCTTAAAC+AGG | - | chr4_1:58608187-58608206 | Msa0559420:intron | 20.0% |
| !! | GATAAGAAATATCTTAAACA+GGG | - | chr4_1:58608188-58608207 | Msa0559420:intron | 20.0% |
| !! | ATAAGAAATATCTTAAACAG+GGG | - | chr4_1:58608189-58608208 | Msa0559420:intron | 20.0% |
| !! | CAAGTAAAAAAATATGACAA+GGG | + | chr4_1:58608277-58608296 | None:intergenic | 20.0% |
| !! | ACAAGTAAAAAAATATGACA+AGG | + | chr4_1:58608278-58608297 | None:intergenic | 20.0% |
| !!! | TTGCATTGATTTATTTATTG+TGG | - | chr4_1:58608461-58608480 | Msa0559420:intron | 20.0% |
| !!! | TATTATGTTTTAGACTAGTT+TGG | - | chr4_1:58608595-58608614 | Msa0559420:intron | 20.0% |
| !!! | TTAAATTATATTTCAAGTGG+GGG | + | chr4_1:58608638-58608657 | None:intergenic | 20.0% |
| !! | AATCTTTCTATATCTGAAAA+AGG | - | chr4_1:58608913-58608932 | Msa0559420:CDS | 20.0% |
| !! | ATCTTTCTATATCTGAAAAA+GGG | - | chr4_1:58608914-58608933 | Msa0559420:CDS | 20.0% |
| !! | CATAGACAATATTAAATCTT+AGG | + | chr4_1:58609134-58609153 | None:intergenic | 20.0% |
| !! | AAATAAAAACCTAACATTTC+CGG | + | chr4_1:58609256-58609275 | None:intergenic | 20.0% |
| !!! | AACATAGTTATCTTTTTTGA+TGG | - | chr4_1:58609318-58609337 | Msa0559420:intron | 20.0% |
| !! | AATATTTCTCAGCTATTATA+AGG | - | chr4_1:58609492-58609511 | Msa0559420:intron | 20.0% |
| !!! | AAAGTTTTTAAAAGGATTGA+GGG | + | chr4_1:58609548-58609567 | None:intergenic | 20.0% |
| !!! | AAAAGTTTTTAAAAGGATTG+AGG | + | chr4_1:58609549-58609568 | None:intergenic | 20.0% |
| !!! | TAGCAACAAAAGTTTTTAAA+AGG | + | chr4_1:58609556-58609575 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTGACTCTTATAT+AGG | - | chr4_1:58609637-58609656 | Msa0559420:intron | 20.0% |
| !!! | ATTTCAAATTTGTTCTTCAT+AGG | + | chr4_1:58610481-58610500 | None:intergenic | 20.0% |
| !!! | ATTAACAAAAATTTGAAGCT+TGG | + | chr4_1:58611030-58611049 | None:intergenic | 20.0% |
| !! | TGGTTATAGTATATATAACA+TGG | - | chr4_1:58611507-58611526 | Msa0559420:intron | 20.0% |
| !! | ATTATGTTTACCAGAAAATT+AGG | + | chr4_1:58611623-58611642 | None:intergenic | 20.0% |
| !! | ATCAAATAAAGAACTGAATT+AGG | + | chr4_1:58611866-58611885 | None:intergenic | 20.0% |
| !! | ATTTAAATAAGTTAGGTAAC+TGG | - | chr4_1:58611899-58611918 | Msa0559420:CDS | 20.0% |
| !!! | ACATCTTTTAATATTACTCT+TGG | + | chr4_1:58612514-58612533 | None:intergenic | 20.0% |
| !! | GAGTAATATTAAAAGATGTT+AGG | - | chr4_1:58612515-58612534 | Msa0559420:intron | 20.0% |
| !!! | TCTTACTATTTTTTCTTTCA+GGG | - | chr4_1:58612733-58612752 | Msa0559420:CDS | 20.0% |
| !! | TACTTGAAGATATTACAAAA+AGG | + | chr4_1:58613328-58613347 | None:intergenic | 20.0% |
| !! | TATATGTTTGTATATGCAAT+CGG | - | chr4_1:58613417-58613436 | Msa0559420:intron | 20.0% |
| !! | AAAAAGGTTAATAGTATGTT+TGG | + | chr4_1:58613545-58613564 | None:intergenic | 20.0% |
| !! | CATCAAAAGATATTACAAAA+AGG | + | chr4_1:58613561-58613580 | None:intergenic | 20.0% |
| !!! | CTTTTTGTAATATCTTTTGA+TGG | - | chr4_1:58613559-58613578 | Msa0559420:five_prime_UTR | 20.0% |
| ! | ATTTAAATTCGCATACGATT+GGG | + | chr4_1:58604504-58604523 | None:intergenic | 25.0% |
| ! | TATTTAAATTCGCATACGAT+TGG | + | chr4_1:58604505-58604524 | None:intergenic | 25.0% |
| ! | AAAAAAAACGTTGAAAAGCA+AGG | - | chr4_1:58605184-58605203 | Msa0559420:intron | 25.0% |
| !!! | GATTTGGGTATTTATTTTTG+AGG | - | chr4_1:58605224-58605243 | Msa0559420:CDS | 25.0% |
| !!! | TTTTTGAGGGTTTATAATTC+TGG | - | chr4_1:58605238-58605257 | Msa0559420:CDS | 25.0% |
| !!! | TTTTGAGGGTTTATAATTCT+GGG | - | chr4_1:58605239-58605258 | Msa0559420:CDS | 25.0% |
| !!! | ATTTCATTTTATTGGTTGTG+GGG | - | chr4_1:58605281-58605300 | Msa0559420:intron | 25.0% |
| !!! | TTTTGAATGTTGTTGATGAT+TGG | - | chr4_1:58605307-58605326 | Msa0559420:intron | 25.0% |
| ! | GATTAACATGTTGAACTATT+TGG | - | chr4_1:58605443-58605462 | Msa0559420:CDS | 25.0% |
| ! | GTTATTACTTTAATGGAAGA+AGG | - | chr4_1:58605752-58605771 | Msa0559420:intron | 25.0% |
| !! | GTAAATATGTTTTCCCATTT+TGG | - | chr4_1:58605798-58605817 | Msa0559420:intron | 25.0% |
| !!! | TAGTTTCTCTTAGTTTTTCT+AGG | + | chr4_1:58605909-58605928 | None:intergenic | 25.0% |
| ! | TATATTACAGTACACTATCA+TGG | + | chr4_1:58606204-58606223 | None:intergenic | 25.0% |
| !!! | TACAGAGTTCTGAAAAATTT+AGG | + | chr4_1:58606233-58606252 | None:intergenic | 25.0% |
| !!! | AACTTGAACAATTTTCAAGA+TGG | - | chr4_1:58606303-58606322 | Msa0559420:intron | 25.0% |
| ! | TTTGAAAGAGATGCAAATAT+TGG | + | chr4_1:58606372-58606391 | None:intergenic | 25.0% |
| !! | ACGTTCAAGGTATTTATTTA+AGG | + | chr4_1:58606449-58606468 | None:intergenic | 25.0% |
| !! | TTATTTGACTTCTTAATGCT+AGG | - | chr4_1:58606519-58606538 | Msa0559420:CDS | 25.0% |
| ! | ATTGATATGAGTATTAAGAG+TGG | - | chr4_1:58606663-58606682 | Msa0559420:intron | 25.0% |
| ! | ACTTTGAACTATTATGTAAG+TGG | + | chr4_1:58607070-58607089 | None:intergenic | 25.0% |
| ! | CTTGGTTTAACTAAAATATG+AGG | + | chr4_1:58607306-58607325 | None:intergenic | 25.0% |
| ! | GTTAATTATGATACCTTCAT+TGG | - | chr4_1:58607378-58607397 | Msa0559420:intron | 25.0% |
| !! | ATATTTTACATGTGTATACC+AGG | - | chr4_1:58607795-58607814 | Msa0559420:intron | 25.0% |
| !! | TTCAGTTTTCAAAAGATTGA+GGG | + | chr4_1:58608150-58608169 | None:intergenic | 25.0% |
| !! | TTTCAGTTTTCAAAAGATTG+AGG | + | chr4_1:58608151-58608170 | None:intergenic | 25.0% |
| ! | ATAAATCCCAAAATAGCAAA+TGG | + | chr4_1:58608403-58608422 | None:intergenic | 25.0% |
| ! | AACATGAAATGAGTTAGTAA+AGG | + | chr4_1:58608760-58608779 | None:intergenic | 25.0% |
| ! | TTTACTAACTCATTTCATGT+TGG | - | chr4_1:58608759-58608778 | Msa0559420:intron | 25.0% |
| !! | ATAAACTCAAAAAAGCACAA+AGG | + | chr4_1:58608801-58608820 | None:intergenic | 25.0% |
| ! | TAAAAAAAGCAATACAACAC+AGG | + | chr4_1:58608844-58608863 | None:intergenic | 25.0% |
| ! | ATGTTATAGAAAAGAAGGAT+CGG | + | chr4_1:58608876-58608895 | None:intergenic | 25.0% |
| ! | GAGATATGTTATAGAAAAGA+AGG | + | chr4_1:58608881-58608900 | None:intergenic | 25.0% |
| ! | TAGAAAGATTACAACAATTC+TGG | + | chr4_1:58608903-58608922 | None:intergenic | 25.0% |
| ! | TCTTTCTATATCTGAAAAAG+GGG | - | chr4_1:58608915-58608934 | Msa0559420:CDS | 25.0% |
| ! | TTTGAAAAAGGACAAAAGAA+AGG | + | chr4_1:58609041-58609060 | None:intergenic | 25.0% |
| !!! | TTTCTTTTGTCCTTTTTCAA+AGG | - | chr4_1:58609040-58609059 | Msa0559420:intron | 25.0% |
| ! | ACTAACCAAAATTACTTCTT+TGG | - | chr4_1:58609107-58609126 | Msa0559420:intron | 25.0% |
| ! | ACTATGTAAATCAAGGATAA+AGG | + | chr4_1:58609406-58609425 | None:intergenic | 25.0% |
| ! | TTTATCCTTGATTTACATAG+TGG | - | chr4_1:58609405-58609424 | Msa0559420:intron | 25.0% |
| ! | TACATAGTGGTTTCTATATT+TGG | - | chr4_1:58609418-58609437 | Msa0559420:intron | 25.0% |
| !! | AATATTCTGTTTGCATGTTT+TGG | + | chr4_1:58609663-58609682 | None:intergenic | 25.0% |
| !!! | CTGTGTAATTTTGTTTAGTT+AGG | + | chr4_1:58610131-58610150 | None:intergenic | 25.0% |
| ! | ATGATGTAACCTTGTAATTA+TGG | - | chr4_1:58611085-58611104 | Msa0559420:CDS | 25.0% |
| ! | TAATATTTGTTCAAGTGTAC+AGG | + | chr4_1:58611112-58611131 | None:intergenic | 25.0% |
| !!! | AAAGAGTTTTGATGATAACA+AGG | + | chr4_1:58611161-58611180 | None:intergenic | 25.0% |
| ! | GTTATCATCAAAACTCTTTA+AGG | - | chr4_1:58611162-58611181 | Msa0559420:intron | 25.0% |
| ! | AATAGTTCATATATAGGTAG+AGG | + | chr4_1:58611369-58611388 | None:intergenic | 25.0% |
| ! | ATGCTATATAACCTGAAAAT+AGG | + | chr4_1:58611444-58611463 | None:intergenic | 25.0% |
| ! | TATATACTATAACCAGCTTT+GGG | + | chr4_1:58611502-58611521 | None:intergenic | 25.0% |
| ! | ATATATACTATAACCAGCTT+TGG | + | chr4_1:58611503-58611522 | None:intergenic | 25.0% |
| !! | TAAAATTTTATCCACACTCT+TGG | + | chr4_1:58611555-58611574 | None:intergenic | 25.0% |
| ! | AAACAAGTAACAATGAAAGA+AGG | + | chr4_1:58611579-58611598 | None:intergenic | 25.0% |
| ! | TTTACCAGAAAATTAGGTAT+CGG | + | chr4_1:58611617-58611636 | None:intergenic | 25.0% |
| ! | CTGGTAAACATAATGTTAAT+CGG | - | chr4_1:58611629-58611648 | Msa0559420:intron | 25.0% |
| ! | ACTAATGCAGATATGATATT+TGG | - | chr4_1:58611690-58611709 | Msa0559420:intron | 25.0% |
| ! | AACCTTAAATGCATTTGAAA+GGG | + | chr4_1:58611787-58611806 | None:intergenic | 25.0% |
| !! | CTTTTAAACTGCTAATTCTA+CGG | - | chr4_1:58611929-58611948 | Msa0559420:CDS | 25.0% |
| ! | TTATATGTTAGATACAACTC+AGG | + | chr4_1:58611964-58611983 | None:intergenic | 25.0% |
| ! | TATACATGCTTCTCATTTAT+TGG | - | chr4_1:58612249-58612268 | Msa0559420:intron | 25.0% |
| ! | ATGTAAATCACCTATATAAC+TGG | - | chr4_1:58612375-58612394 | Msa0559420:intron | 25.0% |
| ! | TGTAAATCACCTATATAACT+GGG | - | chr4_1:58612376-58612395 | Msa0559420:intron | 25.0% |
| ! | AATTACATTATACTCAGAAG+TGG | + | chr4_1:58612470-58612489 | None:intergenic | 25.0% |
| ! | TACGAATAAAAGTAAGTGTT+TGG | + | chr4_1:58612710-58612729 | None:intergenic | 25.0% |
| !!! | CTCTTACTATTTTTTCTTTC+AGG | - | chr4_1:58612732-58612751 | Msa0559420:CDS | 25.0% |
| ! | ACTGTAGCTATTCATATATT+CGG | - | chr4_1:58612823-58612842 | Msa0559420:CDS | 25.0% |
| TCCATACATTACCCAAATAA+AGG | - | chr4_1:58604542-58604561 | Msa0559420:three_prime_UTR | 30.0% | |
| ! | TCCTTTATTTGGGTAATGTA+TGG | + | chr4_1:58604546-58604565 | None:intergenic | 30.0% |
| !! | CGATGGATTATCCTTTATTT+GGG | + | chr4_1:58604556-58604575 | None:intergenic | 30.0% |
| !! | TCGATGGATTATCCTTTATT+TGG | + | chr4_1:58604557-58604576 | None:intergenic | 30.0% |
| GTTGAAAGAAGAAGGTTTAT+TGG | + | chr4_1:58604671-58604690 | None:intergenic | 30.0% | |
| ! | AAAAGGGTAACTTACCTTTT+TGG | + | chr4_1:58605135-58605154 | None:intergenic | 30.0% |
| ACGGATCTATCAACAAAAAA+GGG | + | chr4_1:58605161-58605180 | None:intergenic | 30.0% | |
| AACGGATCTATCAACAAAAA+AGG | + | chr4_1:58605162-58605181 | None:intergenic | 30.0% | |
| TATTATGTTGTGTAGGTTAC+TGG | - | chr4_1:58605407-58605426 | Msa0559420:CDS | 30.0% | |
| ACAAAGAGTCATGTATTACA+TGG | - | chr4_1:58605660-58605679 | Msa0559420:intron | 30.0% | |
| !! | AATTGAGATTAAGGTTTTGG+TGG | - | chr4_1:58605776-58605795 | Msa0559420:intron | 30.0% |
| ! | TAGTGAGTTGAACCAATATA+TGG | - | chr4_1:58605948-58605967 | Msa0559420:intron | 30.0% |
| ! | TAAGCTTTATCCAACTATGT+GGG | + | chr4_1:58606018-58606037 | None:intergenic | 30.0% |
| ! | TTAAGCTTTATCCAACTATG+TGG | + | chr4_1:58606019-58606038 | None:intergenic | 30.0% |
| TATTTGCATCTCTTTCAAAG+AGG | - | chr4_1:58606373-58606392 | Msa0559420:intron | 30.0% | |
| ! | AACATGCTTTAAACAACAAC+CGG | - | chr4_1:58606583-58606602 | Msa0559420:intron | 30.0% |
| TGGATTTCAATATGATAGAC+CGG | + | chr4_1:58606605-58606624 | None:intergenic | 30.0% | |
| TTTGTGAATCAAGGACATAT+TGG | + | chr4_1:58606625-58606644 | None:intergenic | 30.0% | |
| !! | ATTGCTTTGTTTGTGAATCA+AGG | + | chr4_1:58606634-58606653 | None:intergenic | 30.0% |
| GAAAGAAATATTCTTCAGCA+CGG | - | chr4_1:58606691-58606710 | Msa0559420:intron | 30.0% | |
| TTACATGCGACATAATGTAA+TGG | + | chr4_1:58607002-58607021 | None:intergenic | 30.0% | |
| ! | AAAGCATGAGACAGTTTTTA+GGG | + | chr4_1:58607238-58607257 | None:intergenic | 30.0% |
| ! | CAATCATTTTGTGGGATTTT+GGG | - | chr4_1:58607329-58607348 | Msa0559420:intron | 30.0% |
| AATTGTGAGACTATTTGCTT+TGG | - | chr4_1:58607418-58607437 | Msa0559420:intron | 30.0% | |
| ! | GCTTTGGTATAATTGCATTT+TGG | - | chr4_1:58607434-58607453 | Msa0559420:intron | 30.0% |
| CTCAAATCACTATGGAAATT+TGG | - | chr4_1:58607571-58607590 | Msa0559420:intron | 30.0% | |
| AAATATTCCAACTGTCAAGA+AGG | + | chr4_1:58607684-58607703 | None:intergenic | 30.0% | |
| GTTAGAACCATGAAGAAAAT+AGG | + | chr4_1:58607733-58607752 | None:intergenic | 30.0% | |
| !! | TGGTTCTAACCTTCTTATAT+TGG | - | chr4_1:58607743-58607762 | Msa0559420:intron | 30.0% |
| GATACATAGCCAATATAAGA+AGG | + | chr4_1:58607755-58607774 | None:intergenic | 30.0% | |
| TATGCAATTGGCTATGTATA+TGG | - | chr4_1:58607822-58607841 | Msa0559420:intron | 30.0% | |
| TTGCTACTGGAATAAAAGAA+TGG | + | chr4_1:58607879-58607898 | None:intergenic | 30.0% | |
| ! | ATTCTTTTATTCCAGTAGCA+AGG | - | chr4_1:58607878-58607897 | Msa0559420:intron | 30.0% |
| ! | TTTTTATCTTTCCTTGCTAC+TGG | + | chr4_1:58607892-58607911 | None:intergenic | 30.0% |
| TACAATACACCAAAAATGGT+GGG | + | chr4_1:58608026-58608045 | None:intergenic | 30.0% | |
| ! | TCAGTTTTCAAAAGATTGAG+GGG | + | chr4_1:58608149-58608168 | None:intergenic | 30.0% |
| CAATGAAAGGATAAAATCAG+AGG | + | chr4_1:58608312-58608331 | None:intergenic | 30.0% | |
| TCCTTTCATTGTTCATAAAC+AGG | - | chr4_1:58608321-58608340 | Msa0559420:intron | 30.0% | |
| ACCTGTTTATGAACAATGAA+AGG | + | chr4_1:58608325-58608344 | None:intergenic | 30.0% | |
| !! | AAACAGGTTGAAAGTCATTT+TGG | - | chr4_1:58608337-58608356 | Msa0559420:intron | 30.0% |
| !!! | ATGCTTCCATTTGCTATTTT+GGG | - | chr4_1:58608394-58608413 | Msa0559420:intron | 30.0% |
| AGAGATCGAAAACAATATCA+AGG | + | chr4_1:58608489-58608508 | None:intergenic | 30.0% | |
| ! | TTCGATCTCTAAACTACTTT+TGG | - | chr4_1:58608499-58608518 | Msa0559420:intron | 30.0% |
| !! | TCTAAACTACTTTTGGATAC+AGG | - | chr4_1:58608506-58608525 | Msa0559420:intron | 30.0% |
| TGTGTAAATATAGATTGGTG+TGG | + | chr4_1:58608704-58608723 | None:intergenic | 30.0% | |
| CGAGTTGTGTAAATATAGAT+TGG | + | chr4_1:58608709-58608728 | None:intergenic | 30.0% | |
| AAAAGGACAAAAGAAAGGAA+CGG | + | chr4_1:58609036-58609055 | None:intergenic | 30.0% | |
| ! | TAGGACCAAAGAAGTAATTT+TGG | + | chr4_1:58609115-58609134 | None:intergenic | 30.0% |
| ! | TTATTTTCCCAGACATGAAA+GGG | + | chr4_1:58609182-58609201 | None:intergenic | 30.0% |
| TTTCAATTACCGGAAATGTT+AGG | - | chr4_1:58609244-58609263 | Msa0559420:intron | 30.0% | |
| GAATCACAATATCTCTTCAT+TGG | - | chr4_1:58609291-58609310 | Msa0559420:intron | 30.0% | |
| !!! | TATCTTTTTTGATGGACAGA+TGG | - | chr4_1:58609326-58609345 | Msa0559420:intron | 30.0% |
| !!! | ATCTTTTTTGATGGACAGAT+GGG | - | chr4_1:58609327-58609346 | Msa0559420:intron | 30.0% |
| AGAAACCACTATGTAAATCA+AGG | + | chr4_1:58609413-58609432 | None:intergenic | 30.0% | |
| TGCATCTATAAGCACTATAA+CGG | + | chr4_1:58609461-58609480 | None:intergenic | 30.0% | |
| AATAGCTGAGAAATATTGAC+AGG | + | chr4_1:58609489-58609508 | None:intergenic | 30.0% | |
| TCTGAAAGATATGAAAGTGA+AGG | - | chr4_1:58609701-58609720 | Msa0559420:CDS | 30.0% | |
| TAATCAGAATCTAAATGCAG+CGG | - | chr4_1:58609834-58609853 | Msa0559420:CDS | 30.0% | |
| TTGATTATGTTCTTGAGCAA+AGG | + | chr4_1:58610043-58610062 | None:intergenic | 30.0% | |
| AACACTTGATATACAATCAG+AGG | - | chr4_1:58610168-58610187 | Msa0559420:intron | 30.0% | |
| TCTTTCACACCTCTATATAA+AGG | + | chr4_1:58610372-58610391 | None:intergenic | 30.0% | |
| AAGAAAATAGCTCCAGAATA+CGG | + | chr4_1:58610541-58610560 | None:intergenic | 30.0% | |
| AAACACAAACAAAGGATTAG+TGG | + | chr4_1:58610697-58610716 | None:intergenic | 30.0% | |
| AATGAGCAAATAAAGAGCTA+AGG | + | chr4_1:58611054-58611073 | None:intergenic | 30.0% | |
| TTACAAGGTTACATCATCAT+TGG | + | chr4_1:58611082-58611101 | None:intergenic | 30.0% | |
| ATATATAGGTAGAGGAGAAT+GGG | + | chr4_1:58611361-58611380 | None:intergenic | 30.0% | |
| ! | GTTACTGAATTCCTATTTTC+AGG | - | chr4_1:58611430-58611449 | Msa0559420:intron | 30.0% |
| ATAGCATACAACTTTGTCAT+CGG | - | chr4_1:58611457-58611476 | Msa0559420:intron | 30.0% | |
| ATATACTATAACCAGCTTTG+GGG | + | chr4_1:58611501-58611520 | None:intergenic | 30.0% | |
| TTACCAGAAAATTAGGTATC+GGG | + | chr4_1:58611616-58611635 | None:intergenic | 30.0% | |
| AATGCAGATATGATATTTGG+AGG | - | chr4_1:58611693-58611712 | Msa0559420:intron | 30.0% | |
| TACAATTGTATGCGGAATAT+TGG | - | chr4_1:58611719-58611738 | Msa0559420:intron | 30.0% | |
| ACAATTGTATGCGGAATATT+GGG | - | chr4_1:58611720-58611739 | Msa0559420:intron | 30.0% | |
| TAGTCATGTAATCAAGAACA+AGG | + | chr4_1:58611761-58611780 | None:intergenic | 30.0% | |
| CAACCTTAAATGCATTTGAA+AGG | + | chr4_1:58611788-58611807 | None:intergenic | 30.0% | |
| ! | CTTTCAAATGCATTTAAGGT+TGG | - | chr4_1:58611786-58611805 | Msa0559420:intron | 30.0% |
| ! | AGTTTTCTTCACATAGAGAA+GGG | + | chr4_1:58612187-58612206 | None:intergenic | 30.0% |
| ! | AAGTTTTCTTCACATAGAGA+AGG | + | chr4_1:58612188-58612207 | None:intergenic | 30.0% |
| ! | GAGAAGCATGTATATAGTTT+AGG | + | chr4_1:58612243-58612262 | None:intergenic | 30.0% |
| GATTAACTTCCCAGTTATAT+AGG | + | chr4_1:58612388-58612407 | None:intergenic | 30.0% | |
| ATGGAGACATACATAATTCA+CGG | + | chr4_1:58612761-58612780 | None:intergenic | 30.0% | |
| TTTACAGTACAATATTCCGA+TGG | - | chr4_1:58612936-58612955 | Msa0559420:intron | 30.0% | |
| TACAGGATCATATTAACAAC+TGG | - | chr4_1:58612971-58612990 | Msa0559420:intron | 30.0% | |
| ! | TATTGTTGTTAGAATCAACG+CGG | + | chr4_1:58613004-58613023 | None:intergenic | 30.0% |
| TGTAGCATCATATAATAGCA+TGG | - | chr4_1:58613118-58613137 | Msa0559420:intron | 30.0% | |
| ACTATGCAAAAATATTCCTG+TGG | + | chr4_1:58613194-58613213 | None:intergenic | 30.0% | |
| !! | AGGAATATTTTTGCATAGTG+TGG | - | chr4_1:58613195-58613214 | Msa0559420:CDS | 30.0% |
| CATCATGTATCAAATGTAGA+AGG | - | chr4_1:58613241-58613260 | Msa0559420:CDS | 30.0% | |
| ACAAAAAGGTTAACCTTCTT+GGG | + | chr4_1:58613314-58613333 | None:intergenic | 30.0% | |
| TACAAAAAGGTTAACCTTCT+TGG | + | chr4_1:58613315-58613334 | None:intergenic | 30.0% | |
| TCTGAAAAAACACGTCAAAA+AGG | - | chr4_1:58613484-58613503 | Msa0559420:intron | 30.0% | |
| ! | AAAACACGTCAAAAAGGTTT+TGG | - | chr4_1:58613490-58613509 | Msa0559420:five_prime_UTR | 30.0% |
| ! | AAACACGTCAAAAAGGTTTT+GGG | - | chr4_1:58613491-58613510 | Msa0559420:five_prime_UTR | 30.0% |
| !! | ATCTTTTTGCTTTTGCTTAG+TGG | - | chr4_1:58613671-58613690 | Msa0559420:five_prime_UTR | 30.0% |
| ATGTTTATGTTTCACCATCT+TGG | - | chr4_1:58613735-58613754 | Msa0559420:five_prime_UTR | 30.0% | |
| TGTTTATGTTTCACCATCTT+GGG | - | chr4_1:58613736-58613755 | Msa0559420:five_prime_UTR | 30.0% | |
| TAAACCTTCTTCTTTCAACC+TGG | - | chr4_1:58604672-58604691 | Msa0559420:three_prime_UTR | 35.0% | |
| GAATAGAAAATGGAGGTTGA+AGG | + | chr4_1:58604711-58604730 | None:intergenic | 35.0% | |
| !! | AATGTTAACTTGTGCCCTTA+AGG | - | chr4_1:58604784-58604803 | Msa0559420:three_prime_UTR | 35.0% |
| ATCCTTATCTTGTGCCTTAA+GGG | + | chr4_1:58604801-58604820 | None:intergenic | 35.0% | |
| TTTCTTATCTTGTGCCCTTA+GGG | - | chr4_1:58604923-58604942 | Msa0559420:three_prime_UTR | 35.0% | |
| CTTCTTGGTTTACACCAAAA+AGG | - | chr4_1:58605118-58605137 | Msa0559420:intron | 35.0% | |
| CAACAAAAAAGGGGTGAAAA+GGG | + | chr4_1:58605151-58605170 | None:intergenic | 35.0% | |
| TCAACAAAAAAGGGGTGAAA+AGG | + | chr4_1:58605152-58605171 | None:intergenic | 35.0% | |
| CGGATCTATCAACAAAAAAG+GGG | + | chr4_1:58605160-58605179 | None:intergenic | 35.0% | |
| ! | ATAGCTAGCAATGGTGTTAA+TGG | - | chr4_1:58605477-58605496 | Msa0559420:CDS | 35.0% |
| GAAGAAGGGAATTGAGATTA+AGG | - | chr4_1:58605767-58605786 | Msa0559420:intron | 35.0% | |
| ! | GGGAATTGAGATTAAGGTTT+TGG | - | chr4_1:58605773-58605792 | Msa0559420:intron | 35.0% |
| GACATGTAGATTCAGTAGTA+AGG | - | chr4_1:58605835-58605854 | Msa0559420:intron | 35.0% | |
| AAGGAGAGTAGATCAAATGA+AGG | - | chr4_1:58605854-58605873 | Msa0559420:intron | 35.0% | |
| CTATCATGGTATGAAACACA+AGG | + | chr4_1:58606190-58606209 | None:intergenic | 35.0% | |
| !! | TTGTTTTGTACTTCCGTGTA+GGG | - | chr4_1:58606272-58606291 | Msa0559420:intron | 35.0% |
| !! | AGTTCTCTCATCTGCTTTTA+TGG | - | chr4_1:58606326-58606345 | Msa0559420:intron | 35.0% |
| TAGGGCGGAATAAAATGATA+AGG | + | chr4_1:58606742-58606761 | None:intergenic | 35.0% | |
| TAACCCAATACTGAGAACTT+TGG | - | chr4_1:58606798-58606817 | Msa0559420:intron | 35.0% | |
| GGGTTTACACTGCAAAATAT+AGG | + | chr4_1:58606902-58606921 | None:intergenic | 35.0% | |
| GTAAACCCCTTTAGACTTAT+TGG | - | chr4_1:58606914-58606933 | Msa0559420:intron | 35.0% | |
| CAACTCCAATAAGTCTAAAG+GGG | + | chr4_1:58606922-58606941 | None:intergenic | 35.0% | |
| CCAACTCCAATAAGTCTAAA+GGG | + | chr4_1:58606923-58606942 | None:intergenic | 35.0% | |
| ACCAACTCCAATAAGTCTAA+AGG | + | chr4_1:58606924-58606943 | None:intergenic | 35.0% | |
| GTGGTCTTTCTTTCAATTTC+TGG | - | chr4_1:58606975-58606994 | Msa0559420:intron | 35.0% | |
| !! | GAAAGCATGAGACAGTTTTT+AGG | + | chr4_1:58607239-58607258 | None:intergenic | 35.0% |
| ! | ACCAAGAAGCAATCATTTTG+TGG | - | chr4_1:58607320-58607339 | Msa0559420:intron | 35.0% |
| ! | CCAAGAAGCAATCATTTTGT+GGG | - | chr4_1:58607321-58607340 | Msa0559420:intron | 35.0% |
| ! | GCAATCATTTTGTGGGATTT+TGG | - | chr4_1:58607328-58607347 | Msa0559420:intron | 35.0% |
| TTTCTTACCTTCTTGACAGT+TGG | - | chr4_1:58607674-58607693 | Msa0559420:intron | 35.0% | |
| ! | TTTGCTGCCTATTTTCTTCA+TGG | - | chr4_1:58607723-58607742 | Msa0559420:intron | 35.0% |
| CTATGTATCAGAAAACAGTG+TGG | - | chr4_1:58607766-58607785 | Msa0559420:intron | 35.0% | |
| ! | TTTTACATGTGTATACCAGG+CGG | - | chr4_1:58607798-58607817 | Msa0559420:intron | 35.0% |
| CTAAAAAAAAAAGGGCAACC+CGG | - | chr4_1:58607960-58607979 | Msa0559420:intron | 35.0% | |
| GTACAATACACCAAAAATGG+TGG | + | chr4_1:58608027-58608046 | None:intergenic | 35.0% | |
| TGCGTACAATACACCAAAAA+TGG | + | chr4_1:58608030-58608049 | None:intergenic | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr4_1:58608054-58608073 | None:intergenic | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr4_1:58608053-58608072 | Msa0559420:intron | 35.0% |
| AGAAATATCTTAAACAGGGG+AGG | - | chr4_1:58608192-58608211 | Msa0559420:intron | 35.0% | |
| !! | AGGTTGAAAGTCATTTTGGT+TGG | - | chr4_1:58608341-58608360 | Msa0559420:intron | 35.0% |
| !!! | GATGCTTCCATTTGCTATTT+TGG | - | chr4_1:58608393-58608412 | Msa0559420:intron | 35.0% |
| ATGAAGCCTTTGCAGTTAAA+AGG | - | chr4_1:58608424-58608443 | Msa0559420:intron | 35.0% | |
| !!! | GCACTTTTTTTGAATCAGCA+GGG | + | chr4_1:58608538-58608557 | None:intergenic | 35.0% |
| !!! | AGCACTTTTTTTGAATCAGC+AGG | + | chr4_1:58608539-58608558 | None:intergenic | 35.0% |
| !! | TGCTGATTCAAAAAAAGTGC+TGG | - | chr4_1:58608538-58608557 | Msa0559420:intron | 35.0% |
| !!! | TGTTTTAGACTAGTTTGGTG+AGG | - | chr4_1:58608600-58608619 | Msa0559420:intron | 35.0% |
| CAACACAGGAGAAAAAAATC+AGG | + | chr4_1:58608830-58608849 | None:intergenic | 35.0% | |
| TCTCAACAATCAGGGTTTAA+TGG | + | chr4_1:58608962-58608981 | None:intergenic | 35.0% | |
| GAGAACATTCTCAACAATCA+GGG | + | chr4_1:58608970-58608989 | None:intergenic | 35.0% | |
| AATATTTCCCCTTTCATGTC+TGG | - | chr4_1:58609171-58609190 | Msa0559420:intron | 35.0% | |
| ATATTTCCCCTTTCATGTCT+GGG | - | chr4_1:58609172-58609191 | Msa0559420:intron | 35.0% | |
| ! | TATTTTCCCAGACATGAAAG+GGG | + | chr4_1:58609181-58609200 | None:intergenic | 35.0% |
| !! | GTTATTTTCCCAGACATGAA+AGG | + | chr4_1:58609183-58609202 | None:intergenic | 35.0% |
| TTCCGGTAATTGAAAGACAT+GGG | + | chr4_1:58609239-58609258 | None:intergenic | 35.0% | |
| TTTCCGGTAATTGAAAGACA+TGG | + | chr4_1:58609240-58609259 | None:intergenic | 35.0% | |
| !!! | TCTTTTTTGATGGACAGATG+GGG | - | chr4_1:58609328-58609347 | Msa0559420:intron | 35.0% |
| ATAAAGGTGAAGTTCTCACT+GGG | + | chr4_1:58609390-58609409 | None:intergenic | 35.0% | |
| TTATTGTATCTCCAAGTGTG+TGG | - | chr4_1:58609581-58609600 | Msa0559420:intron | 35.0% | |
| AAGGTGAGAAAAACACAAGA+AGG | - | chr4_1:58609720-58609739 | Msa0559420:CDS | 35.0% | |
| AGGTGAGAAAAACACAAGAA+GGG | - | chr4_1:58609721-58609740 | Msa0559420:CDS | 35.0% | |
| ! | GATCAGTGTGTTCAGTTTTT+AGG | + | chr4_1:58609784-58609803 | None:intergenic | 35.0% |
| ACGACACAAAGCAATTATAC+TGG | - | chr4_1:58609881-58609900 | Msa0559420:CDS | 35.0% | |
| TACTCTTAGTGAAATCTCCT+TGG | + | chr4_1:58609949-58609968 | None:intergenic | 35.0% | |
| TTGATTGTGTTCTTCAGCAA+AGG | + | chr4_1:58610073-58610092 | None:intergenic | 35.0% | |
| CAAATCAGATACAGACTCAA+TGG | - | chr4_1:58610202-58610221 | Msa0559420:intron | 35.0% | |
| TCTTGCATTACCAATTCTCT+AGG | - | chr4_1:58610338-58610357 | Msa0559420:intron | 35.0% | |
| GTCTTCACTCCTTTATATAG+AGG | - | chr4_1:58610360-58610379 | Msa0559420:intron | 35.0% | |
| CAAATCAGGCAAAAGATCAT+TGG | + | chr4_1:58610450-58610469 | None:intergenic | 35.0% | |
| ! | CAATGATCTTTTGCCTGATT+TGG | - | chr4_1:58610448-58610467 | Msa0559420:CDS | 35.0% |
| GAAATCCATTCCTTATCCAA+AGG | - | chr4_1:58610496-58610515 | Msa0559420:CDS | 35.0% | |
| ATGTTCCTTTGGATAAGGAA+TGG | + | chr4_1:58610504-58610523 | None:intergenic | 35.0% | |
| CATAGATGTTCCTTTGGATA+AGG | + | chr4_1:58610509-58610528 | None:intergenic | 35.0% | |
| !! | GTCATTTCAAAGGTGTTTGA+AGG | + | chr4_1:58610663-58610682 | None:intergenic | 35.0% |
| ATTTGCAACGGTCATTTCAA+AGG | + | chr4_1:58610673-58610692 | None:intergenic | 35.0% | |
| ! | AGGATTAGTGGAATTTGCAA+CGG | + | chr4_1:58610685-58610704 | None:intergenic | 35.0% |
| GGATTCGAAAACACAAACAA+AGG | + | chr4_1:58610705-58610724 | None:intergenic | 35.0% | |
| TCAATGCAAAAGCTGTCTAT+TGG | + | chr4_1:58610726-58610745 | None:intergenic | 35.0% | |
| AAATTCAGCTTCTGGTGAAA+TGG | - | chr4_1:58610783-58610802 | Msa0559420:intron | 35.0% | |
| !! | GTTAAGTTGCTTCTGAAGTA+AGG | + | chr4_1:58610960-58610979 | None:intergenic | 35.0% |
| TTCAGAAGCAACTTAACTTC+AGG | - | chr4_1:58610963-58610982 | Msa0559420:intron | 35.0% | |
| TGTACAGGACCATAATTACA+AGG | + | chr4_1:58611097-58611116 | None:intergenic | 35.0% | |
| ! | CCAACAGAAAGAACTTTTGT+CGG | - | chr4_1:58611208-58611227 | Msa0559420:intron | 35.0% |
| ! | GAAAGAACTTTTGTCGGATA+AGG | - | chr4_1:58611214-58611233 | Msa0559420:intron | 35.0% |
| CATATATAGGTAGAGGAGAA+TGG | + | chr4_1:58611362-58611381 | None:intergenic | 35.0% | |
| GGAGGAATTACAATTGTATG+CGG | - | chr4_1:58611711-58611730 | Msa0559420:intron | 35.0% | |
| CACCCTTTCAAATGCATTTA+AGG | - | chr4_1:58611782-58611801 | Msa0559420:intron | 35.0% | |
| TTCAAGGTAACTAGTTAGGA+TGG | + | chr4_1:58612028-58612047 | None:intergenic | 35.0% | |
| AGAGTTCAAGGTAACTAGTT+AGG | + | chr4_1:58612032-58612051 | None:intergenic | 35.0% | |
| CTCTCATTGACAACATTAGT+CGG | - | chr4_1:58612061-58612080 | Msa0559420:intron | 35.0% | |
| ! | ATACATGCTTTTGAATGCGA+AGG | + | chr4_1:58612107-58612126 | None:intergenic | 35.0% |
| ! | TTCGCATTCAAAAGCATGTA+TGG | - | chr4_1:58612106-58612125 | Msa0559420:intron | 35.0% |
| !! | TTCCTAGCTCTTTTTGCTAT+TGG | - | chr4_1:58612130-58612149 | Msa0559420:intron | 35.0% |
| !!! | ACTACTTGTTTTTACCACTC+AGG | - | chr4_1:58612156-58612175 | Msa0559420:intron | 35.0% |
| TCCAAACCTAATGTTGTGTT+TGG | - | chr4_1:58612421-58612440 | Msa0559420:intron | 35.0% | |
| TCCAAACACAACATTAGGTT+TGG | + | chr4_1:58612425-58612444 | None:intergenic | 35.0% | |
| AGTCATCCAAACACAACATT+AGG | + | chr4_1:58612430-58612449 | None:intergenic | 35.0% | |
| TACGAATGAGGACAAAATTG+AGG | - | chr4_1:58612601-58612620 | Msa0559420:intron | 35.0% | |
| GATGATGTAGAATGTAGAGA+TGG | - | chr4_1:58612679-58612698 | Msa0559420:intron | 35.0% | |
| TGGAGACATACATAATTCAC+GGG | + | chr4_1:58612760-58612779 | None:intergenic | 35.0% | |
| TCAAACTTGGCTTAACACAA+TGG | + | chr4_1:58612780-58612799 | None:intergenic | 35.0% | |
| ATTGTGTTAAGCCAAGTTTG+AGG | - | chr4_1:58612779-58612798 | Msa0559420:CDS | 35.0% | |
| ! | TTGTCCAGGTTAGCATTTTT+AGG | - | chr4_1:58612875-58612894 | Msa0559420:intron | 35.0% |
| TACACCTAAAAATGCTAACC+TGG | + | chr4_1:58612882-58612901 | None:intergenic | 35.0% | |
| GGTTTATTGGTAAGTCATCA+TGG | - | chr4_1:58613046-58613065 | Msa0559420:intron | 35.0% | |
| AATGTACGAAACAAACTACG+TGG | + | chr4_1:58613589-58613608 | None:intergenic | 35.0% | |
| !! | TTGCTTTTGCTTAGTGGAAA+TGG | - | chr4_1:58613677-58613696 | Msa0559420:five_prime_UTR | 35.0% |
| GTTCTTGTTGACAACGATGT+TGG | + | chr4_1:58604602-58604621 | None:intergenic | 40.0% | |
| GATCCTTATCTTGTGCCTTA+AGG | + | chr4_1:58604802-58604821 | None:intergenic | 40.0% | |
| GTTTCTTATCTTGTGCCCTT+AGG | - | chr4_1:58604922-58604941 | Msa0559420:three_prime_UTR | 40.0% | |
| !! | CTTGTTAACTTGTGCCCTAA+GGG | + | chr4_1:58604940-58604959 | None:intergenic | 40.0% |
| !! | TCTTGTTAACTTGTGCCCTA+AGG | + | chr4_1:58604941-58604960 | None:intergenic | 40.0% |
| !! | GTTAGGTGTTGAAGAAGAAG+AGG | + | chr4_1:58605040-58605059 | None:intergenic | 40.0% |
| ! | ATGTTTGGTTCCACAGAAGA+AGG | + | chr4_1:58605069-58605088 | None:intergenic | 40.0% |
| TTCTTCTGTGGAACCAAACA+TGG | - | chr4_1:58605068-58605087 | Msa0559420:intron | 40.0% | |
| ATGTTGAACTATTTGGACCG+AGG | - | chr4_1:58605450-58605469 | Msa0559420:CDS | 40.0% | |
| ! | AATGGTGTTAATGGACATCG+TGG | - | chr4_1:58605486-58605505 | Msa0559420:CDS | 40.0% |
| ! | ATGGTGTTAATGGACATCGT+GGG | - | chr4_1:58605487-58605506 | Msa0559420:CDS | 40.0% |
| TCTCTCTACATGCCCAAAAT+GGG | + | chr4_1:58605814-58605833 | None:intergenic | 40.0% | |
| TTCTCTCTACATGCCCAAAA+TGG | + | chr4_1:58605815-58605834 | None:intergenic | 40.0% | |
| TGTAGATGATCCCACATAGT+TGG | - | chr4_1:58606005-58606024 | Msa0559420:intron | 40.0% | |
| ACACAAGGAAAAGCTCATAC+AGG | + | chr4_1:58606175-58606194 | None:intergenic | 40.0% | |
| !! | GTTGTTTTGTACTTCCGTGT+AGG | - | chr4_1:58606271-58606290 | Msa0559420:intron | 40.0% |
| ! | TGTTTTGTACTTCCGTGTAG+GGG | - | chr4_1:58606273-58606292 | Msa0559420:intron | 40.0% |
| AAGTTAAAATCCCCCCTACA+CGG | + | chr4_1:58606288-58606307 | None:intergenic | 40.0% | |
| !! | CTCTCATCTGCTTTTATGGT+TGG | - | chr4_1:58606330-58606349 | Msa0559420:intron | 40.0% |
| !! | GTCATTGATTCACACGTTCA+AGG | + | chr4_1:58606462-58606481 | None:intergenic | 40.0% |
| AATCAATGACGTGGCTCATT+GGG | - | chr4_1:58606472-58606491 | Msa0559420:CDS | 40.0% | |
| GGTCCAAAGTTCTCAGTATT+GGG | + | chr4_1:58606804-58606823 | None:intergenic | 40.0% | |
| AGGTCCAAAGTTCTCAGTAT+TGG | + | chr4_1:58606805-58606824 | None:intergenic | 40.0% | |
| GTGCATGTACTAGAAAGAGA+AGG | + | chr4_1:58606825-58606844 | None:intergenic | 40.0% | |
| CCCTTTAGACTTATTGGAGT+TGG | - | chr4_1:58606920-58606939 | Msa0559420:intron | 40.0% | |
| !! | TTGGAGTTGGTTTGTCAGTT+TGG | - | chr4_1:58606933-58606952 | Msa0559420:intron | 40.0% |
| AGTAACAAACCTGTGAAGCT+GGG | + | chr4_1:58607213-58607232 | None:intergenic | 40.0% | |
| AAGTAACAAACCTGTGAAGC+TGG | + | chr4_1:58607214-58607233 | None:intergenic | 40.0% | |
| AATATGAGCACAGTAGACGA+TGG | + | chr4_1:58607279-58607298 | None:intergenic | 40.0% | |
| CGTCTACTGTGCTCATATTT+AGG | - | chr4_1:58607280-58607299 | Msa0559420:intron | 40.0% | |
| CCCACAAAATGATTGCTTCT+TGG | + | chr4_1:58607324-58607343 | None:intergenic | 40.0% | |
| AGGTATCAATGACCCAATGA+AGG | + | chr4_1:58607394-58607413 | None:intergenic | 40.0% | |
| GCAATTGGCTATGTATATGG+TGG | - | chr4_1:58607825-58607844 | Msa0559420:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr4_1:58608059-58608078 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr4_1:58608060-58608079 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr4_1:58608104-58608123 | None:intergenic | 40.0% | |
| AAAAGATTGAGGGGTAACCT+TGG | + | chr4_1:58608140-58608159 | None:intergenic | 40.0% | |
| !! | TGTGCACCTTTTAACTGCAA+AGG | + | chr4_1:58608433-58608452 | None:intergenic | 40.0% |
| ATAGTACCTTGAACACCCAA+AGG | + | chr4_1:58608578-58608597 | None:intergenic | 40.0% | |
| ! | GTGCATGTTGTGTTACTACA+TGG | - | chr4_1:58608670-58608689 | Msa0559420:intron | 40.0% |
| ! | CATGTTGTGTTACTACATGG+TGG | - | chr4_1:58608673-58608692 | Msa0559420:intron | 40.0% |
| GGAGAACATTCTCAACAATC+AGG | + | chr4_1:58608971-58608990 | None:intergenic | 40.0% | |
| !!! | TCCTTTTTCAAAGGCAGTGA+GGG | - | chr4_1:58609049-58609068 | Msa0559420:intron | 40.0% |
| CACCCATGTCTTTCAATTAC+CGG | - | chr4_1:58609234-58609253 | Msa0559420:intron | 40.0% | |
| GATAAAGGTGAAGTTCTCAC+TGG | + | chr4_1:58609391-58609410 | None:intergenic | 40.0% | |
| GATAATCATTCTCAGCTGGA+GGG | + | chr4_1:58609526-58609545 | None:intergenic | 40.0% | |
| GGTGAGAAAAACACAAGAAG+GGG | - | chr4_1:58609722-58609741 | Msa0559420:intron | 40.0% | |
| GTGAGAAAAACACAAGAAGG+GGG | - | chr4_1:58609723-58609742 | Msa0559420:intron | 40.0% | |
| TGAGAAAAACACAAGAAGGG+GGG | - | chr4_1:58609724-58609743 | Msa0559420:intron | 40.0% | |
| ! | AAATCTCCTTGGAAGTGCAA+GGG | + | chr4_1:58609938-58609957 | None:intergenic | 40.0% |
| ATGCAGAACAATTTCAGCAG+AGG | - | chr4_1:58610274-58610293 | Msa0559420:intron | 40.0% | |
| GAACAATTTCAGCAGAGGTT+TGG | - | chr4_1:58610279-58610298 | Msa0559420:intron | 40.0% | |
| AAGCTTCAACAACGACTCTT+TGG | + | chr4_1:58610418-58610437 | None:intergenic | 40.0% | |
| CATAGGACAACAACCAAATC+AGG | + | chr4_1:58610464-58610483 | None:intergenic | 40.0% | |
| ATCCAAAGGAACATCTATGC+AGG | - | chr4_1:58610510-58610529 | Msa0559420:CDS | 40.0% | |
| ! | TATTTTCTTGTCCTGTAGCG+TGG | - | chr4_1:58610552-58610571 | Msa0559420:CDS | 40.0% |
| TCCAGTTGAAATTCAGCTTC+TGG | - | chr4_1:58610775-58610794 | Msa0559420:intron | 40.0% | |
| ACCAGAAGCTGAATTTCAAC+TGG | + | chr4_1:58610779-58610798 | None:intergenic | 40.0% | |
| CTTCTGAACTTCTTGTCTTC+AGG | - | chr4_1:58610889-58610908 | Msa0559420:intron | 40.0% | |
| !! | AGTTAAGTCGCTTCTGAAGT+TGG | + | chr4_1:58610924-58610943 | None:intergenic | 40.0% |
| CCGACAAAAGTTCTTTCTGT+TGG | + | chr4_1:58611211-58611230 | None:intergenic | 40.0% | |
| ! | GTTTTTGTCGTCAACGTTCT+AGG | - | chr4_1:58611236-58611255 | Msa0559420:intron | 40.0% |
| TTCATCTAATGCCAAGAGTG+TGG | - | chr4_1:58611541-58611560 | Msa0559420:intron | 40.0% | |
| ! | ATGCCCGATACCTAATTTTC+TGG | - | chr4_1:58611610-58611629 | Msa0559420:intron | 40.0% |
| TTTACAGGAGAGACTTAGGA+AGG | + | chr4_1:58611995-58612014 | None:intergenic | 40.0% | |
| GGAATTTACAGGAGAGACTT+AGG | + | chr4_1:58611999-58612018 | None:intergenic | 40.0% | |
| GATGGAGCAATGGAATTTAC+AGG | + | chr4_1:58612010-58612029 | None:intergenic | 40.0% | |
| AACTAGTTAGGATGGAGCAA+TGG | + | chr4_1:58612020-58612039 | None:intergenic | 40.0% | |
| GAGAAGCTGAAAAGAGTTCA+AGG | + | chr4_1:58612044-58612063 | None:intergenic | 40.0% | |
| TCATTGACAACATTAGTCGG+TGG | - | chr4_1:58612064-58612083 | Msa0559420:intron | 40.0% | |
| CACCAATAGCAAAAAGAGCT+AGG | + | chr4_1:58612135-58612154 | None:intergenic | 40.0% | |
| !! | ATTGATAGTGGCCTCAAACT+TGG | + | chr4_1:58612793-58612812 | None:intergenic | 40.0% |
| ! | AAGTTTGAGGCCACTATCAA+TGG | - | chr4_1:58612792-58612811 | Msa0559420:CDS | 40.0% |
| GTAGACATAGCCATTGATAG+TGG | + | chr4_1:58612805-58612824 | None:intergenic | 40.0% | |
| ACAGTACAATATTCCGATGG+CGG | - | chr4_1:58612939-58612958 | Msa0559420:intron | 40.0% | |
| ! | TTTTTCCAGCAGCTGCAATA+TGG | - | chr4_1:58613025-58613044 | Msa0559420:intron | 40.0% |
| ATAAACCATATTGCAGCTGC+TGG | + | chr4_1:58613033-58613052 | None:intergenic | 40.0% | |
| GCAGCTGCAATATGGTTTAT+TGG | - | chr4_1:58613033-58613052 | Msa0559420:intron | 40.0% | |
| TGATGCTACAGCAATGAACT+TGG | + | chr4_1:58613108-58613127 | None:intergenic | 40.0% | |
| TCATGATACTTTGTTGCCAC+AGG | - | chr4_1:58613175-58613194 | Msa0559420:CDS | 40.0% | |
| ! | TATATGCAATCGGAAAGTGC+TGG | - | chr4_1:58613427-58613446 | Msa0559420:intron | 40.0% |
| TTTACATGATGTGCCCAAGA+TGG | + | chr4_1:58613752-58613771 | None:intergenic | 40.0% | |
| ACAAGAGAGTTTCGAAGCTG+CGG | - | chr4_1:58604626-58604645 | Msa0559420:three_prime_UTR | 45.0% | |
| ! | CAAGCCAGGTTGAAAGAAGA+AGG | + | chr4_1:58604679-58604698 | None:intergenic | 45.0% |
| GAAGGTAACAAAAGCAAGCC+AGG | + | chr4_1:58604693-58604712 | None:intergenic | 45.0% | |
| TGCCCTTAAGGCACAAGATA+AGG | - | chr4_1:58604796-58604815 | Msa0559420:three_prime_UTR | 45.0% | |
| ! | GAAGAAGAGGTTGTTGTTGC+AGG | + | chr4_1:58605027-58605046 | None:intergenic | 45.0% |
| ACAGAAGAAGGAACAGGGTT+AGG | + | chr4_1:58605057-58605076 | None:intergenic | 45.0% | |
| TAACCCTGTTCCTTCTTCTG+TGG | - | chr4_1:58605056-58605075 | Msa0559420:intron | 45.0% | |
| GTTCCACAGAAGAAGGAACA+GGG | + | chr4_1:58605062-58605081 | None:intergenic | 45.0% | |
| AGAAGTTGCAGGAATCATGG+TGG | + | chr4_1:58605103-58605122 | None:intergenic | 45.0% | |
| CCAAGAAGTTGCAGGAATCA+TGG | + | chr4_1:58605106-58605125 | None:intergenic | 45.0% | |
| CCATGATTCCTGCAACTTCT+TGG | - | chr4_1:58605103-58605122 | Msa0559420:intron | 45.0% | |
| GGTGTAAACCAAGAAGTTGC+AGG | + | chr4_1:58605114-58605133 | None:intergenic | 45.0% | |
| CATTGCTAGCTATTGCTCCT+CGG | + | chr4_1:58605470-58605489 | None:intergenic | 45.0% | |
| ACTGATGGTATCTGCAAGTC+TGG | - | chr4_1:58605516-58605535 | Msa0559420:intron | 45.0% | |
| ! | GTTTTGTACTTCCGTGTAGG+GGG | - | chr4_1:58606274-58606293 | Msa0559420:intron | 45.0% |
| ! | TTTTGTACTTCCGTGTAGGG+GGG | - | chr4_1:58606275-58606294 | Msa0559420:intron | 45.0% |
| GAACGTGTGAATCAATGACG+TGG | - | chr4_1:58606463-58606482 | Msa0559420:intron | 45.0% | |
| GAATCAATGACGTGGCTCAT+TGG | - | chr4_1:58606471-58606490 | Msa0559420:CDS | 45.0% | |
| GAAAGAAAGACCACAGCACA+AGG | + | chr4_1:58606969-58606988 | None:intergenic | 45.0% | |
| CTTATTCTCTCTAGGCTCGT+TGG | - | chr4_1:58607133-58607152 | Msa0559420:intron | 45.0% | |
| ! | GGGGCGTTATCATCAATGAA+AGG | + | chr4_1:58607193-58607212 | None:intergenic | 45.0% |
| GTAACAAACCTGTGAAGCTG+GGG | + | chr4_1:58607212-58607231 | None:intergenic | 45.0% | |
| ATACCAGGCGGATATGCAAT+TGG | - | chr4_1:58607810-58607829 | Msa0559420:intron | 45.0% | |
| ! | TGGCTATGTATATGGTGGAG+TGG | - | chr4_1:58607830-58607849 | Msa0559420:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr4_1:58608064-58608083 | Msa0559420:intron | 45.0% |
| TCATGTGACTGTAAGGTCAC+GGG | + | chr4_1:58608097-58608116 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | + | chr4_1:58608098-58608117 | None:intergenic | 45.0% | |
| ! | TTGGTTGGCGTTATGCGTTT+TGG | - | chr4_1:58608356-58608375 | Msa0559420:intron | 45.0% |
| ! | TGGTTGGCGTTATGCGTTTT+GGG | - | chr4_1:58608357-58608376 | Msa0559420:intron | 45.0% |
| GCAGTTGAGACAGTTCCTTT+GGG | - | chr4_1:58608560-58608579 | Msa0559420:intron | 45.0% | |
| ACAGTTCCTTTGGGTGTTCA+AGG | - | chr4_1:58608569-58608588 | Msa0559420:intron | 45.0% | |
| !!! | GTCCTTTTTCAAAGGCAGTG+AGG | - | chr4_1:58609048-58609067 | Msa0559420:intron | 45.0% |
| ! | TCCCTCACTGCCTTTGAAAA+AGG | + | chr4_1:58609053-58609072 | None:intergenic | 45.0% |
| !! | TTTTTGATGGACAGATGGGG+AGG | - | chr4_1:58609331-58609350 | Msa0559420:intron | 45.0% |
| GGATAATCATTCTCAGCTGG+AGG | + | chr4_1:58609527-58609546 | None:intergenic | 45.0% | |
| GAGGGATAATCATTCTCAGC+TGG | + | chr4_1:58609530-58609549 | None:intergenic | 45.0% | |
| GTGCATCAGTCACTTAGAGA+TGG | + | chr4_1:58609610-58609629 | None:intergenic | 45.0% | |
| GAGAAAAACACAAGAAGGGG+GGG | - | chr4_1:58609725-58609744 | Msa0559420:intron | 45.0% | |
| ! | GGGGGGTTGAATTGTGTTTT+TGG | - | chr4_1:58609742-58609761 | Msa0559420:intron | 45.0% |
| !! | TACTGGTTCCTTCCACAATC+CGG | - | chr4_1:58609898-58609917 | Msa0559420:CDS | 45.0% |
| ! | AATCTCCTTGGAAGTGCAAG+GGG | + | chr4_1:58609937-58609956 | None:intergenic | 45.0% |
| ! | GAAATCTCCTTGGAAGTGCA+AGG | + | chr4_1:58609939-58609958 | None:intergenic | 45.0% |
| TTGCTTGTGTGCTTGAGCAT+TGG | + | chr4_1:58609983-58610002 | None:intergenic | 45.0% | |
| TCTTGCAATTGTGCTTGAGC+AGG | + | chr4_1:58610103-58610122 | None:intergenic | 45.0% | |
| GGAGTGAAGACCTAGAGAAT+TGG | + | chr4_1:58610351-58610370 | None:intergenic | 45.0% | |
| GTGGACACAAAACAGAGTAG+TGG | - | chr4_1:58610571-58610590 | Msa0559420:intron | 45.0% | |
| ! | AAACAGAGTAGTGGAGAACG+TGG | - | chr4_1:58610580-58610599 | Msa0559420:intron | 45.0% |
| ! | GAAGGCGTGTGTTTGCAATT+TGG | + | chr4_1:58610645-58610664 | None:intergenic | 45.0% |
| TGGTGAAATGGCTTCTGATG+AGG | - | chr4_1:58610795-58610814 | Msa0559420:intron | 45.0% | |
| ! | TCTGATGATGCAGCTTCTGA+TGG | - | chr4_1:58610823-58610842 | Msa0559420:intron | 45.0% |
| ! | TCATCGGTGCTTACTCGTAT+TGG | - | chr4_1:58611473-58611492 | Msa0559420:intron | 45.0% |
| ! | CATCGGTGCTTACTCGTATT+GGG | - | chr4_1:58611474-58611493 | Msa0559420:intron | 45.0% |
| ! | ATCGGTGCTTACTCGTATTG+GGG | - | chr4_1:58611475-58611494 | Msa0559420:intron | 45.0% |
| GGAATATTGGGCACTTTAGC+AGG | - | chr4_1:58611732-58611751 | Msa0559420:intron | 45.0% | |
| ATATTGGGCACTTTAGCAGG+AGG | - | chr4_1:58611735-58611754 | Msa0559420:intron | 45.0% | |
| GTGGTCTTCTCTTCAAGCAA+CGG | + | chr4_1:58613280-58613299 | None:intergenic | 45.0% | |
| TTCTTGGGATTGAGGTTCTG+TGG | + | chr4_1:58613299-58613318 | None:intergenic | 45.0% | |
| ACAGAACCTCAATCCCAAGA+AGG | - | chr4_1:58613298-58613317 | Msa0559420:intron | 45.0% | |
| GGTTAACCTTCTTGGGATTG+AGG | + | chr4_1:58613307-58613326 | None:intergenic | 45.0% | |
| ! | CTCTTCAAGCAATGGTGTTG+TGG | + | chr4_1:58613352-58613371 | None:intergenic | 45.0% |
| CCTGTCTTCTCTTCAAGCAA+TGG | + | chr4_1:58613360-58613379 | None:intergenic | 45.0% | |
| CCATTGCTTGAAGAGAAGAC+AGG | - | chr4_1:58613357-58613376 | Msa0559420:intron | 45.0% | |
| !! | AAAGTGCTGGACACACGTTT+AGG | - | chr4_1:58613440-58613459 | Msa0559420:intron | 45.0% |
| CAAAGTGACGAGGATGTCGA+TGG | + | chr4_1:58604573-58604592 | None:intergenic | 50.0% | |
| !! | TTGGTGTCGTCAAAGTGACG+AGG | + | chr4_1:58604583-58604602 | None:intergenic | 50.0% |
| CAAGAGAGTTTCGAAGCTGC+GGG | - | chr4_1:58604627-58604646 | Msa0559420:three_prime_UTR | 50.0% | |
| AAGAGAGTTTCGAAGCTGCG+GGG | - | chr4_1:58604628-58604647 | Msa0559420:three_prime_UTR | 50.0% | |
| ! | GAGGTTGTTGTTGCAGGCTT+CGG | + | chr4_1:58605021-58605040 | None:intergenic | 50.0% |
| GGTTCCACAGAAGAAGGAAC+AGG | + | chr4_1:58605063-58605082 | None:intergenic | 50.0% | |
| !! | CAGGAATCATGGTGGACTTG+GGG | + | chr4_1:58605095-58605114 | None:intergenic | 50.0% |
| !! | GCAGGAATCATGGTGGACTT+GGG | + | chr4_1:58605096-58605115 | None:intergenic | 50.0% |
| !! | TGCAGGAATCATGGTGGACT+TGG | + | chr4_1:58605097-58605116 | None:intergenic | 50.0% |
| CGAGGAGCAATAGCTAGCAA+TGG | - | chr4_1:58605468-58605487 | Msa0559420:CDS | 50.0% | |
| ! | GGTATCTGCAAGTCTGGAAC+AGG | - | chr4_1:58605522-58605541 | Msa0559420:intron | 50.0% |
| ACTGTTGCAACCTTGTGCTG+TGG | - | chr4_1:58606956-58606975 | Msa0559420:intron | 50.0% | |
| TAGCCAATTGCATATCCGCC+TGG | + | chr4_1:58607816-58607835 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr4_1:58608120-58608139 | Msa0559420:intron | 50.0% | |
| !! | TTGGCGTTATGCGTTTTGGG+TGG | - | chr4_1:58608360-58608379 | Msa0559420:intron | 50.0% |
| GGCAGTTGAGACAGTTCCTT+TGG | - | chr4_1:58608559-58608578 | Msa0559420:intron | 50.0% | |
| AGGTGAAGTTCTCACTGGGA+AGG | + | chr4_1:58609386-58609405 | None:intergenic | 50.0% | |
| AGAGATGGATGCCACACACT+TGG | + | chr4_1:58609595-58609614 | None:intergenic | 50.0% | |
| GACTACTTCCGGATTGTGGA+AGG | + | chr4_1:58609909-58609928 | None:intergenic | 50.0% | |
| ACTGGACTACTTCCGGATTG+TGG | + | chr4_1:58609913-58609932 | None:intergenic | 50.0% | |
| ! | ATCTCCTTGGAAGTGCAAGG+GGG | + | chr4_1:58609936-58609955 | None:intergenic | 50.0% |
| ! | ACAACGACTCTTTGGTGTGC+TGG | + | chr4_1:58610410-58610429 | None:intergenic | 50.0% |
| CGCCTGCATAGATGTTCCTT+TGG | + | chr4_1:58610515-58610534 | None:intergenic | 50.0% | |
| ATGCAGGCGAAACCGTATTC+TGG | - | chr4_1:58610526-58610545 | Msa0559420:CDS | 50.0% | |
| ! | CTGTTTTGTGTCCACGCTAC+AGG | + | chr4_1:58610566-58610585 | None:intergenic | 50.0% |
| !!! | GGAGCGCTTTTTCTCTTCAG+CGG | - | chr4_1:58610984-58611003 | Msa0559420:intron | 50.0% |
| !!! | GTCGGTGGTGCGTTTTGTTT+TGG | - | chr4_1:58612079-58612098 | Msa0559420:intron | 50.0% |
| !! | AGAGAAGGGAAGTACCTGAG+TGG | + | chr4_1:58612173-58612192 | None:intergenic | 50.0% |
| ACCTGGACAACTCCAACAAG+AGG | + | chr4_1:58612865-58612884 | None:intergenic | 50.0% | |
| TGTATGCATAGAGCCGCCAT+CGG | + | chr4_1:58612955-58612974 | None:intergenic | 50.0% | |
| AGAGAGTTTCGAAGCTGCGG+GGG | - | chr4_1:58604629-58604648 | Msa0559420:three_prime_UTR | 55.0% | |
| GCAGGCTTCGGTTCATGTTC+AGG | + | chr4_1:58605009-58605028 | None:intergenic | 55.0% | |
| GTGGACTTGGGGACCATGTT+TGG | + | chr4_1:58605084-58605103 | None:intergenic | 55.0% | |
| CATCGTGGGACTTGCACTGA+TGG | - | chr4_1:58605501-58605520 | Msa0559420:intron | 55.0% | |
| ACGTGGCTCATTGGGTTCTC+TGG | - | chr4_1:58606480-58606499 | Msa0559420:CDS | 55.0% | |
| CGTGGCTCATTGGGTTCTCT+GGG | - | chr4_1:58606481-58606500 | Msa0559420:CDS | 55.0% | |
| CTCTCTAGGCTCGTTGGTGT+TGG | - | chr4_1:58607139-58607158 | Msa0559420:intron | 55.0% | |
| ! | TGATAACGCCCCAGCTTCAC+AGG | - | chr4_1:58607201-58607220 | Msa0559420:intron | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr4_1:58607982-58608001 | None:intergenic | 55.0% |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr4_1:58607986-58608005 | Msa0559420:intron | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr4_1:58607987-58608006 | Msa0559420:intron | 55.0% | |
| ! | AAAATGGTGGGACCCCTTCC+CGG | + | chr4_1:58608014-58608033 | None:intergenic | 55.0% |
| ! | GGAAGGGGTCCCACCATTTT+TGG | - | chr4_1:58608014-58608033 | Msa0559420:intron | 55.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr4_1:58608085-58608104 | None:intergenic | 55.0% | |
| !! | GCGTTATGCGTTTTGGGTGG+AGG | - | chr4_1:58608363-58608382 | Msa0559420:intron | 55.0% |
| AAGGGGGACTGGACTACTTC+CGG | + | chr4_1:58609920-58609939 | None:intergenic | 55.0% | |
| TTCAGCGGCAAGTTGCCTTC+AGG | - | chr4_1:58610999-58611018 | Msa0559420:intron | 55.0% | |
| TGAAGCTTGGACGCTCCTGA+AGG | + | chr4_1:58611017-58611036 | None:intergenic | 55.0% | |
| GACAACTCCAACAAGAGGCG+CGG | + | chr4_1:58612860-58612879 | None:intergenic | 55.0% | |
| GCCTCTTGTTGGAGTTGTCC+AGG | - | chr4_1:58612861-58612880 | Msa0559420:intron | 55.0% | |
| ! | GATGGCGGCTCTATGCATAC+AGG | - | chr4_1:58612954-58612973 | Msa0559420:intron | 55.0% |
| TTTCGAAGCTGCGGGGGTGA+AGG | - | chr4_1:58604635-58604654 | Msa0559420:three_prime_UTR | 60.0% | |
| !! | TAGGCTCGTTGGTGTTGGCG+AGG | - | chr4_1:58607144-58607163 | Msa0559420:intron | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr4_1:58607981-58608000 | None:intergenic | 60.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr4_1:58608131-58608150 | None:intergenic | 60.0% | |
| ! | CTTGGAAGTGCAAGGGGGAC+TGG | + | chr4_1:58609931-58609950 | None:intergenic | 60.0% |
| CAGTCCCCCTTGCACTTCCA+AGG | - | chr4_1:58609929-58609948 | Msa0559420:intron | 60.0% | |
| TCGTATTGGGGCCCCAAAGC+TGG | - | chr4_1:58611487-58611506 | Msa0559420:intron | 60.0% | |
| GTTCCTTCCGCGCCTCTTGT+TGG | - | chr4_1:58612850-58612869 | Msa0559420:intron | 60.0% | |
| ! | ACTCCAACAAGAGGCGCGGA+AGG | + | chr4_1:58612856-58612875 | None:intergenic | 60.0% |
| CTCTTCAAGCAACGGCGCAG+TGG | + | chr4_1:58613272-58613291 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr4_1:58607998-58608017 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr4_1:58607999-58608018 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr4_1:58607998-58608017 | Msa0559420:intron | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr4_1:58607999-58608018 | Msa0559420:intron | 65.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr4_1:58607992-58608011 | Msa0559420:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr4_1:58607993-58608012 | Msa0559420:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr4_1:58607997-58608016 | Msa0559420:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 58604466 | 58613802 | 58604466 | ID=Msa0559420;Name=Msa0559420 |
| chr4_1 | mRNA | 58604466 | 58613802 | 58604466 | ID=Msa0559420-mRNA-1;Parent=Msa0559420;Name=Msa0559420-mRNA-1;_AED=0.13;_eAED=0.15;_QI=335|0.8|0.87|1|0.8|0.81|16|478|543 |
| chr4_1 | exon | 58604466 | 58605071 | 58604466 | ID=Msa0559420-mRNA-1:exon:17943;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58605214 | 58605292 | 58605214 | ID=Msa0559420-mRNA-1:exon:17942;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58605386 | 58605514 | 58605386 | ID=Msa0559420-mRNA-1:exon:17941;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58606091 | 58606210 | 58606091 | ID=Msa0559420-mRNA-1:exon:17940;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58606465 | 58606578 | 58606465 | ID=Msa0559420-mRNA-1:exon:17939;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58606740 | 58606816 | 58606740 | ID=Msa0559420-mRNA-1:exon:17938;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58608842 | 58608943 | 58608842 | ID=Msa0559420-mRNA-1:exon:17937;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58609678 | 58609740 | 58609678 | ID=Msa0559420-mRNA-1:exon:17936;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58609823 | 58609925 | 58609823 | ID=Msa0559420-mRNA-1:exon:17935;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58610417 | 58610575 | 58610417 | ID=Msa0559420-mRNA-1:exon:17934;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58611046 | 58611121 | 58611046 | ID=Msa0559420-mRNA-1:exon:17933;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58611251 | 58611355 | 58611251 | ID=Msa0559420-mRNA-1:exon:17932;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58611874 | 58611975 | 58611874 | ID=Msa0559420-mRNA-1:exon:17931;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58612718 | 58612846 | 58612718 | ID=Msa0559420-mRNA-1:exon:17930;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58613129 | 58613295 | 58613129 | ID=Msa0559420-mRNA-1:exon:17929;Parent=Msa0559420-mRNA-1 |
| chr4_1 | exon | 58613489 | 58613802 | 58613489 | ID=Msa0559420-mRNA-1:exon:17928;Parent=Msa0559420-mRNA-1 |
| chr4_1 | five_prime_UTR | 58613489 | 58613802 | 58613489 | ID=Msa0559420-mRNA-1:five_prime_utr;Parent=Msa0559420-mRNA-1 |
| chr4_1 | five_prime_UTR | 58613275 | 58613295 | 58613275 | ID=Msa0559420-mRNA-1:five_prime_utr;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58613129 | 58613274 | 58613129 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58612718 | 58612846 | 58612718 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58611874 | 58611975 | 58611874 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58611251 | 58611355 | 58611251 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58611046 | 58611121 | 58611046 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58610417 | 58610575 | 58610417 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58609823 | 58609925 | 58609823 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58609678 | 58609740 | 58609678 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58608842 | 58608943 | 58608842 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58606740 | 58606816 | 58606740 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58606465 | 58606578 | 58606465 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58606091 | 58606210 | 58606091 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58605386 | 58605514 | 58605386 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58605214 | 58605292 | 58605214 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | CDS | 58604944 | 58605071 | 58604944 | ID=Msa0559420-mRNA-1:cds;Parent=Msa0559420-mRNA-1 |
| chr4_1 | three_prime_UTR | 58604466 | 58604943 | 58604466 | ID=Msa0559420-mRNA-1:three_prime_utr;Parent=Msa0559420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
