Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569060 | XP_003630250.1 | 94.352 | 779 | 44 | 0 | 1 | 779 | 1 | 779 | 0.0 | 1517 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569060 | sp|Q9LIH5|C3H38_ARATH | 31.136 | 546 | 267 | 19 | 258 | 779 | 216 | 676 | 1.31e-43 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569060 | G7LE04 | 94.352 | 779 | 44 | 0 | 1 | 779 | 1 | 779 | 0.0 | 1517 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0569060 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0569060 | Msa1083570 | 0.810781 | 9.719262e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569060 | MtrunA17_Chr8g0384131 | 94.352 | 779 | 44 | 0 | 1 | 779 | 1 | 779 | 0.0 | 1517 |
| Msa0569060 | MtrunA17_Chr3g0129941 | 48.498 | 666 | 257 | 16 | 172 | 779 | 333 | 970 | 8.66e-179 | 538 |
| Msa0569060 | MtrunA17_Chr3g0129941 | 53.543 | 254 | 90 | 6 | 1 | 236 | 1 | 244 | 4.18e-57 | 211 |
| Msa0569060 | MtrunA17_Chr2g0308451 | 32.524 | 206 | 106 | 5 | 599 | 779 | 1251 | 1448 | 2.02e-19 | 94.0 |
| Msa0569060 | MtrunA17_Chr2g0282581 | 40.964 | 83 | 49 | 0 | 693 | 775 | 805 | 887 | 1.03e-14 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569060 | AT3G18640.3 | 31.136 | 546 | 267 | 19 | 258 | 779 | 216 | 676 | 1.33e-44 | 171 |
| Msa0569060 | AT3G18640.1 | 31.136 | 546 | 267 | 19 | 258 | 779 | 216 | 676 | 1.33e-44 | 171 |
| Msa0569060 | AT3G18640.2 | 31.136 | 546 | 267 | 19 | 258 | 779 | 216 | 676 | 1.33e-44 | 171 |
| Msa0569060 | AT2G10553.1 | 62.500 | 80 | 30 | 0 | 699 | 778 | 2 | 81 | 1.74e-28 | 109 |
| Msa0569060 | AT3G26850.2 | 34.641 | 153 | 93 | 2 | 631 | 779 | 116 | 265 | 1.49e-21 | 95.5 |
| Msa0569060 | AT3G26850.1 | 34.641 | 153 | 93 | 2 | 631 | 779 | 116 | 265 | 1.49e-21 | 95.5 |
| Msa0569060 | AT2G33835.1 | 39.394 | 99 | 57 | 2 | 681 | 778 | 490 | 586 | 1.39e-15 | 81.3 |
Find 225 sgRNAs with CRISPR-Local
Find 587 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCAGTAGTTCAAGGTATT+TGG | 0.172150 | 4_1:+70856301 | Msa0569060:CDS |
| CCTCATCAGGTCCATCATTT+TGG | 0.185844 | 4_1:-70859210 | None:intergenic |
| CATTTACCAGCCCTAGATTA+AGG | 0.209423 | 4_1:+70857865 | Msa0569060:CDS |
| GCAACTGGATCGCTCAATTT+TGG | 0.211063 | 4_1:-70857936 | None:intergenic |
| CTCATGGGGATTAGAATATC+TGG | 0.229022 | 4_1:-70857541 | None:intergenic |
| TCCTTCTTATCAATTGAAAA+TGG | 0.244006 | 4_1:-70858194 | None:intergenic |
| TTCATTGGTAGAGCTTATTA+AGG | 0.265977 | 4_1:+70859276 | Msa0569060:CDS |
| GTTAAATGAAATTAGGATAT+TGG | 0.275238 | 4_1:-70852590 | None:intergenic |
| TTACTCTCGGGTGGAAATTC+AGG | 0.278145 | 4_1:-70856041 | None:intergenic |
| GAACCTCTGACTCCCGAAAA+AGG | 0.282854 | 4_1:-70856371 | None:intergenic |
| TTGCGTGAAAACCTCATTCT+TGG | 0.284032 | 4_1:-70856344 | None:intergenic |
| TGTCTCCGGCACAGTAAATT+TGG | 0.286106 | 4_1:+70858058 | Msa0569060:CDS |
| CAAGCCATGAATCCAGGTTC+TGG | 0.293698 | 4_1:-70858113 | None:intergenic |
| TGGCCGATGTAGATAAAGTT+TGG | 0.319460 | 4_1:+70858006 | Msa0569060:CDS |
| CGACGAAGACTACCAAGTTT+TGG | 0.327823 | 4_1:+70856403 | Msa0569060:CDS |
| CCCATGAATATTAGTGCAAA+TGG | 0.330779 | 4_1:+70858992 | Msa0569060:CDS |
| ATCAAGCCAGATCCTGCTAT+TGG | 0.331025 | 4_1:+70858932 | Msa0569060:CDS |
| CCCATTTGCACTAATATTCA+TGG | 0.335498 | 4_1:-70858993 | None:intergenic |
| GACGATGGTTAAATGAAATT+AGG | 0.337062 | 4_1:-70852597 | None:intergenic |
| ATGTCTCCTGATTGGAATTA+TGG | 0.341445 | 4_1:+70858305 | Msa0569060:CDS |
| TTCTATGCACGGAAAGAGAT+AGG | 0.350014 | 4_1:+70852620 | Msa0569060:five_prime_UTR |
| TGATGGGTTTGATAAAATTT+CGG | 0.356095 | 4_1:+70857674 | Msa0569060:CDS |
| AATAACAGTTGCCTAATGTT+TGG | 0.356794 | 4_1:-70860979 | None:intergenic |
| TGATCCAATGTTTGACAGTA+TGG | 0.360762 | 4_1:+70858967 | Msa0569060:CDS |
| GCAGAAAGCTATCTTCAAAC+TGG | 0.366135 | 4_1:+70856003 | Msa0569060:CDS |
| AGCCTATCACAAATCGGTTC+TGG | 0.370700 | 4_1:+70858713 | Msa0569060:CDS |
| AGCCTTCCATTAGGAGCAAC+TGG | 0.371988 | 4_1:-70857951 | None:intergenic |
| GAATATAACTGCTTCCCATT+TGG | 0.376514 | 4_1:+70858568 | Msa0569060:CDS |
| GTTATTCAGCTGTCGATGAT+AGG | 0.378174 | 4_1:+70857373 | Msa0569060:CDS |
| CGCCCCAGAACCTGGATTCA+TGG | 0.383806 | 4_1:+70858109 | Msa0569060:CDS |
| TGTATAAGTTTGTTAACCTT+TGG | 0.384179 | 4_1:-70859454 | None:intergenic |
| GACCTATCATCCCTTAATCT+AGG | 0.385299 | 4_1:-70857876 | None:intergenic |
| CCTCATAACTTTGCTTATCA+TGG | 0.387218 | 4_1:-70857485 | None:intergenic |
| CTTGACTTTGTCCAACCAAA+TGG | 0.387671 | 4_1:-70858583 | None:intergenic |
| GGGAGTCAGAGGTTCAAATA+AGG | 0.392634 | 4_1:+70856379 | Msa0569060:CDS |
| CTGCGGTGGAGTGCGGGATG+CGG | 0.393128 | 4_1:-70852497 | None:intergenic |
| TTGATGAATGTCATAGAAAC+AGG | 0.398984 | 4_1:-70858914 | None:intergenic |
| AAGGTTACTGATAAAGTAAC+TGG | 0.399020 | 4_1:+70859364 | Msa0569060:CDS |
| ATTTACCAGCCCTAGATTAA+GGG | 0.399284 | 4_1:+70857866 | Msa0569060:CDS |
| AGCGATCCAGTTGCTCCTAA+TGG | 0.403520 | 4_1:+70857945 | Msa0569060:CDS |
| GGTTTGAGGAATGGAACAAT+AGG | 0.403730 | 4_1:+70856480 | Msa0569060:CDS |
| TGCGGTGGAGTGCGGGATGC+GGG | 0.418083 | 4_1:-70852496 | None:intergenic |
| TTTCGGCAGATGAATCATCT+AGG | 0.418420 | 4_1:+70857691 | Msa0569060:CDS |
| TTAGAATATCTGGGTCCATC+TGG | 0.423271 | 4_1:-70857531 | None:intergenic |
| TGCAAAGGGAAGGTGTAGAA+TGG | 0.424935 | 4_1:+70857617 | Msa0569060:CDS |
| CCTTCAATAATTCTTGCTCC+TGG | 0.430287 | 4_1:-70858626 | None:intergenic |
| AGTGAAGAAGCTTAAGGCTC+TGG | 0.431191 | 4_1:+70855959 | Msa0569060:five_prime_UTR |
| GAGAGTAGCCTTTGCATCAC+AGG | 0.432367 | 4_1:-70858861 | None:intergenic |
| TTATAAAACAATTGTGAAGA+AGG | 0.434641 | 4_1:+70859345 | Msa0569060:CDS |
| TCATCTCTTAGCCTTCCATT+AGG | 0.435290 | 4_1:-70857960 | None:intergenic |
| AAGCCATGAATCCAGGTTCT+GGG | 0.436724 | 4_1:-70858112 | None:intergenic |
| GGCCGATGTAGATAAAGTTT+GGG | 0.438991 | 4_1:+70858007 | Msa0569060:CDS |
| AATCTTTATACTAGGAGAAA+AGG | 0.440601 | 4_1:-70859026 | None:intergenic |
| CCATGAATATTAGTGCAAAT+GGG | 0.440948 | 4_1:+70858993 | Msa0569060:CDS |
| AGCAAAGTTATGAGGATAGC+AGG | 0.443006 | 4_1:+70857493 | Msa0569060:CDS |
| TTGCTGACTCCGTTCTGAGT+TGG | 0.443876 | 4_1:-70858743 | None:intergenic |
| CAATTGTTGCATCCAAAACT+TGG | 0.444892 | 4_1:-70856415 | None:intergenic |
| CAGAACCTGGATTCATGGCT+TGG | 0.445159 | 4_1:+70858114 | Msa0569060:CDS |
| TACAGAAGAGAATAGTCCTA+TGG | 0.445294 | 4_1:+70859177 | Msa0569060:CDS |
| TTCCCTCAATTGCATCAAAC+AGG | 0.445579 | 4_1:-70861011 | None:intergenic |
| TGTGCAGGCGTATGTGGAAA+AGG | 0.452314 | 4_1:+70860680 | Msa0569060:intron |
| ATCATAGGCGCCCCAGAACC+TGG | 0.452733 | 4_1:+70858101 | Msa0569060:CDS |
| TTCAATCCAATAGCAGGATC+TGG | 0.454738 | 4_1:-70858938 | None:intergenic |
| TAGTTTACAAACCAAACATT+AGG | 0.456296 | 4_1:+70860968 | Msa0569060:three_prime_UTR |
| TGGCCAATGAACGATGGATC+GGG | 0.459051 | 4_1:+70858134 | Msa0569060:CDS |
| TACAATATGAAAGTGTCTCC+AGG | 0.459715 | 4_1:+70856458 | Msa0569060:CDS |
| ATGCTCATCTTTAATATGAC+TGG | 0.462728 | 4_1:-70858339 | None:intergenic |
| AAAGGTTAACAAACTTATAC+AGG | 0.465005 | 4_1:+70859456 | Msa0569060:CDS |
| GATGCAAAGGCTACTCTCTT+CGG | 0.465991 | 4_1:+70858866 | Msa0569060:CDS |
| GGGAAAGGGAAATTGATAGA+AGG | 0.468456 | 4_1:+70857712 | Msa0569060:CDS |
| TGTCCTAGGTTAGATAATAG+TGG | 0.470060 | 4_1:-70859073 | None:intergenic |
| AGCCTTAAGCTTCTTCACTT+TGG | 0.472592 | 4_1:-70855955 | None:intergenic |
| ACATGCCTCCACCTACTGAC+TGG | 0.474548 | 4_1:-70858265 | None:intergenic |
| TTCTGTTCCTGTCTAAGCTA+TGG | 0.475586 | 4_1:-70858157 | None:intergenic |
| TCAAAGCTGCGGTGGAGTGC+GGG | 0.478145 | 4_1:-70852503 | None:intergenic |
| CTTCAATAATTCTTGCTCCT+GGG | 0.479137 | 4_1:-70858625 | None:intergenic |
| GCAAAGGGAAGGTGTAGAAT+GGG | 0.479280 | 4_1:+70857618 | Msa0569060:CDS |
| CTCGCACCATAATTCCAATC+AGG | 0.479580 | 4_1:-70858311 | None:intergenic |
| TCGTGCATTTAAATCTTCAT+TGG | 0.481043 | 4_1:+70859261 | Msa0569060:CDS |
| ATAACTGCTTCCCATTTGGT+TGG | 0.482978 | 4_1:+70858572 | Msa0569060:CDS |
| GAGAATAATCCCCACTCTCA+TGG | 0.492546 | 4_1:-70857557 | None:intergenic |
| CTCTTCGGAAGCAAAATTGA+AGG | 0.493466 | 4_1:+70858881 | Msa0569060:CDS |
| GGAGTGTTACTGATGTGGTT+TGG | 0.493594 | 4_1:-70857774 | None:intergenic |
| ACTGATTTAGTTGCTGTCTC+CGG | 0.494397 | 4_1:+70858044 | Msa0569060:CDS |
| ATTGGCCAAGCCATGAATCC+AGG | 0.494986 | 4_1:-70858119 | None:intergenic |
| TAAAACCATGTGGAGGGCTC+CGG | 0.496685 | 4_1:-70857350 | None:intergenic |
| GTCCAGAACCGATTTGTGAT+AGG | 0.498070 | 4_1:-70858715 | None:intergenic |
| TACTGTTTCAATCCAATAGC+AGG | 0.498333 | 4_1:-70858944 | None:intergenic |
| CTCAACCAAATTTACTGTGC+CGG | 0.499415 | 4_1:-70858063 | None:intergenic |
| GAGTAATCAAGGTGAAGATC+AGG | 0.501418 | 4_1:+70857902 | Msa0569060:CDS |
| GCTTGCATTTATTATGCAAA+GGG | 0.501531 | 4_1:+70857603 | Msa0569060:CDS |
| AACCAAAGTGAAGAAGCTTA+AGG | 0.501795 | 4_1:+70855953 | Msa0569060:five_prime_UTR |
| TGTCTCCAGGGTTTGAGGAA+TGG | 0.501913 | 4_1:+70856471 | Msa0569060:CDS |
| TTGTTCCATTCCTCAAACCC+TGG | 0.503911 | 4_1:-70856476 | None:intergenic |
| TGGCCCGATCCATCGTTCAT+TGG | 0.506131 | 4_1:-70858137 | None:intergenic |
| AGAATAATCCCCACTCTCAT+GGG | 0.507875 | 4_1:-70857556 | None:intergenic |
| ATGAACAGATGTCTCCTGAT+TGG | 0.507885 | 4_1:+70858297 | Msa0569060:CDS |
| TAGCAGCAGAGTGAAGTTTG+CGG | 0.508540 | 4_1:-70852538 | None:intergenic |
| TTCAATAATTCTTGCTCCTG+GGG | 0.510891 | 4_1:-70858624 | None:intergenic |
| CCATGATAAGCAAAGTTATG+AGG | 0.511629 | 4_1:+70857485 | Msa0569060:CDS |
| GTAGGTGGAGGCATGTGGCC+TGG | 0.514213 | 4_1:+70858272 | Msa0569060:CDS |
| TTTATACTAGGAGAAAAGGT+TGG | 0.514656 | 4_1:-70859022 | None:intergenic |
| GAAAGTGTCTCCAGGGTTTG+AGG | 0.515239 | 4_1:+70856466 | Msa0569060:CDS |
| AGTAAGCAGCAAGTTGCTCC+AGG | 0.516368 | 4_1:+70858368 | Msa0569060:CDS |
| CAAGAAAACAAAGGACGCGA+AGG | 0.517471 | 4_1:+70859234 | Msa0569060:CDS |
| CTCGCACATATCCTCGGAAC+TGG | 0.519764 | 4_1:+70858803 | Msa0569060:CDS |
| CTGAAACCAACATGGAAAGA+TGG | 0.520966 | 4_1:+70859304 | Msa0569060:CDS |
| TTGACTTTGTCCAACCAAAT+GGG | 0.521411 | 4_1:-70858582 | None:intergenic |
| TGTTGTATAAATATAAACTC+AGG | 0.521664 | 4_1:+70860883 | Msa0569060:three_prime_UTR |
| GTGAAGAAGCTTAAGGCTCT+GGG | 0.522270 | 4_1:+70855960 | Msa0569060:five_prime_UTR |
| TTGCCAGGTCTAGGAGAAGT+AGG | 0.522537 | 4_1:+70857325 | Msa0569060:intron |
| ACCTATCATCCCTTAATCTA+GGG | 0.523142 | 4_1:-70857875 | None:intergenic |
| TTAGAGTAGAATGAACTTGT+GGG | 0.523416 | 4_1:-70858835 | None:intergenic |
| TTGGCCAATGAACGATGGAT+CGG | 0.523666 | 4_1:+70858133 | Msa0569060:CDS |
| TTACCTGTTTGATGCAATTG+AGG | 0.523769 | 4_1:+70861008 | Msa0569060:three_prime_UTR |
| CATAGAGCAATCATTCAAGC+AGG | 0.525287 | 4_1:+70857737 | Msa0569060:CDS |
| ATCATCCCTTAATCTAGGGC+TGG | 0.527217 | 4_1:-70857871 | None:intergenic |
| ATCAAAGCTGCGGTGGAGTG+CGG | 0.530423 | 4_1:-70852504 | None:intergenic |
| CGGCACAGTAAATTTGGTTG+AGG | 0.530921 | 4_1:+70858064 | Msa0569060:CDS |
| TTACTAAAAGCAGTAGTTCA+AGG | 0.532963 | 4_1:+70856294 | Msa0569060:CDS |
| ACAGAAGAGAATAGTCCTAT+GGG | 0.535719 | 4_1:+70859178 | Msa0569060:CDS |
| ATTAGGATATTGGAGAGTGA+GGG | 0.539189 | 4_1:-70852580 | None:intergenic |
| AATGCAAGCCTATCACAAAT+CGG | 0.539727 | 4_1:+70858707 | Msa0569060:CDS |
| GCCCTAGATTAAGGGATGAT+AGG | 0.542024 | 4_1:+70857874 | Msa0569060:CDS |
| GTTTGAGGAATGGAACAATA+GGG | 0.542357 | 4_1:+70856481 | Msa0569060:CDS |
| AGATGAATCATCTAGGGAAA+GGG | 0.544094 | 4_1:+70857698 | Msa0569060:CDS |
| ATTCTAATCCCCATGAGAGT+GGG | 0.544443 | 4_1:+70857547 | Msa0569060:CDS |
| CATGCCTCCACCTACTGACT+GGG | 0.545247 | 4_1:-70858264 | None:intergenic |
| GGAGACATGGACCAAAATGA+TGG | 0.546029 | 4_1:+70859199 | Msa0569060:CDS |
| AGCTTGCATTTATTATGCAA+AGG | 0.547591 | 4_1:+70857602 | Msa0569060:CDS |
| TTTAGAGTAGAATGAACTTG+TGG | 0.547988 | 4_1:-70858836 | None:intergenic |
| CTCATTTCCCAGTCAGTAGG+TGG | 0.549087 | 4_1:+70858257 | Msa0569060:CDS |
| AAGAAAACAAAGGACGCGAA+GGG | 0.550204 | 4_1:+70859235 | Msa0569060:CDS |
| ATACTAGGAGAAAAGGTTGG+AGG | 0.551278 | 4_1:-70859019 | None:intergenic |
| GCCTCTCTCGCACATATCCT+CGG | 0.552753 | 4_1:+70858797 | Msa0569060:CDS |
| CCAGGAGCAAGAATTATTGA+AGG | 0.556088 | 4_1:+70858626 | Msa0569060:CDS |
| AATTAGGATATTGGAGAGTG+AGG | 0.556110 | 4_1:-70852581 | None:intergenic |
| CCATTTGCACTAATATTCAT+GGG | 0.556712 | 4_1:-70858992 | None:intergenic |
| AGTCAGTAGGTGGAGGCATG+TGG | 0.556809 | 4_1:+70858267 | Msa0569060:CDS |
| GCAACTAAATCAGTCTGCAT+TGG | 0.556935 | 4_1:-70858035 | None:intergenic |
| GATGATAGATGTGGTTCAGA+TGG | 0.559177 | 4_1:+70857978 | Msa0569060:CDS |
| CAGATGAATCATCTAGGGAA+AGG | 0.559379 | 4_1:+70857697 | Msa0569060:CDS |
| TGATGTGGTTTGGATAATGC+TGG | 0.560096 | 4_1:-70857764 | None:intergenic |
| TTCGGCAGATGAATCATCTA+GGG | 0.560292 | 4_1:+70857692 | Msa0569060:CDS |
| TTTATCAGTTTCGAAACCAA+AGG | 0.562819 | 4_1:+70859438 | Msa0569060:CDS |
| GATCGGGCCATAGCTTAGAC+AGG | 0.565642 | 4_1:+70858150 | Msa0569060:CDS |
| GAAAGTAAACACAGGCCAGA+TGG | 0.570539 | 4_1:+70857516 | Msa0569060:CDS |
| TAACCATCGTCTTCTATGCA+CGG | 0.571248 | 4_1:+70852609 | Msa0569060:five_prime_UTR |
| GTAGAACTTCGGAATGGAGA+AGG | 0.572170 | 4_1:-70852646 | None:intergenic |
| GGTCTAGGAGAAGTAGGAGC+CGG | 0.573061 | 4_1:+70857331 | Msa0569060:intron |
| GCATTTATTATGCAAAGGGA+AGG | 0.573665 | 4_1:+70857607 | Msa0569060:CDS |
| CAGAAAGCTATCTTCAAACT+GGG | 0.573681 | 4_1:+70856004 | Msa0569060:CDS |
| TCATGGGGATTAGAATATCT+GGG | 0.574011 | 4_1:-70857540 | None:intergenic |
| TCAAGGTGAAGATCAGGTGT+TGG | 0.575506 | 4_1:+70857908 | Msa0569060:CDS |
| GTGCATCATGACAATTCTGA+TGG | 0.575886 | 4_1:+70857657 | Msa0569060:CDS |
| AGTAACTGGTACAGTACAGC+GGG | 0.578110 | 4_1:+70859378 | Msa0569060:CDS |
| GCTGTTGGGAACTGCAGAAG+AGG | 0.580264 | 4_1:+70857441 | Msa0569060:CDS |
| CCAACAGCAAAATCTCTACA+AGG | 0.582187 | 4_1:-70857426 | None:intergenic |
| TACTAGGAGAAAAGGTTGGA+GGG | 0.584072 | 4_1:-70859018 | None:intergenic |
| TACCTGTTTGATGCAATTGA+GGG | 0.584950 | 4_1:+70861009 | Msa0569060:three_prime_UTR |
| GGCTCCATACTGTCAAACAT+TGG | 0.585746 | 4_1:-70858971 | None:intergenic |
| GATAGGAACAGAACGAGGGA+TGG | 0.586418 | 4_1:+70857390 | Msa0569060:CDS |
| GATAGGTCGAGGAGTAATCA+AGG | 0.586872 | 4_1:+70857891 | Msa0569060:CDS |
| ATTCTCATTTCCCAGTCAGT+AGG | 0.589106 | 4_1:+70858254 | Msa0569060:CDS |
| TCTATGCACGGAAAGAGATA+GGG | 0.590229 | 4_1:+70852621 | Msa0569060:five_prime_UTR |
| ATGTGGTTCAGATGGCAGAA+TGG | 0.591695 | 4_1:+70857986 | Msa0569060:CDS |
| TATTCTAATCCCCATGAGAG+TGG | 0.592838 | 4_1:+70857546 | Msa0569060:CDS |
| TCCGAGGATATGTGCGAGAG+AGG | 0.592954 | 4_1:-70858798 | None:intergenic |
| GCAAAGTTATGAGGATAGCA+GGG | 0.598476 | 4_1:+70857494 | Msa0569060:CDS |
| ATACGCTAAAACCAAGAATG+AGG | 0.598870 | 4_1:+70856333 | Msa0569060:CDS |
| GGAGACATCTGTTCATCACC+AGG | 0.599211 | 4_1:-70858290 | None:intergenic |
| AGAGTAGCCTTTGCATCACA+GGG | 0.602543 | 4_1:-70858860 | None:intergenic |
| ATCCAGTTGCTCCTAATGGA+AGG | 0.603229 | 4_1:+70857949 | Msa0569060:CDS |
| ACAATTGCAAAAGACACTGA+TGG | 0.604078 | 4_1:+70856431 | Msa0569060:CDS |
| TCTAAAGCCCTGTGATGCAA+AGG | 0.604733 | 4_1:+70858853 | Msa0569060:CDS |
| ATCCCAAACTTTATCTACAT+CGG | 0.604953 | 4_1:-70858009 | None:intergenic |
| ATTTCCCAGTCAGTAGGTGG+AGG | 0.605746 | 4_1:+70858260 | Msa0569060:CDS |
| GTTGTATAAATATAAACTCA+GGG | 0.607394 | 4_1:+70860884 | Msa0569060:three_prime_UTR |
| AGTGAGATGTAGTAGAACTT+CGG | 0.608736 | 4_1:-70852657 | None:intergenic |
| TCTTCGGAAGCAAAATTGAA+GGG | 0.610203 | 4_1:+70858882 | Msa0569060:CDS |
| GATTAAGGGATGATAGGTCG+AGG | 0.611243 | 4_1:+70857880 | Msa0569060:CDS |
| CAAGCATAAATAAATACGCA+AGG | 0.612663 | 4_1:-70860786 | None:intergenic |
| GAATAGTCCTATGGGAGACA+TGG | 0.612755 | 4_1:+70859186 | Msa0569060:CDS |
| TGCAAGGAGTGTTACTGATG+TGG | 0.613717 | 4_1:-70857779 | None:intergenic |
| ACAATATGAAAGTGTCTCCA+GGG | 0.615729 | 4_1:+70856459 | Msa0569060:CDS |
| CATGAATATTAGTGCAAATG+GGG | 0.616718 | 4_1:+70858994 | Msa0569060:CDS |
| GTATGTGGAAAAGGTTCAGA+AGG | 0.617543 | 4_1:+70860689 | Msa0569060:CDS |
| AAACAGGCCTTACTCTCGGG+TGG | 0.618405 | 4_1:-70856050 | None:intergenic |
| AGCCATGAATCCAGGTTCTG+GGG | 0.621203 | 4_1:-70858111 | None:intergenic |
| TTCTAATCCCCATGAGAGTG+GGG | 0.622227 | 4_1:+70857548 | Msa0569060:CDS |
| GAATAACTAAAACCATGTGG+AGG | 0.622897 | 4_1:-70857357 | None:intergenic |
| TCGATGATAGGAACAGAACG+AGG | 0.623889 | 4_1:+70857385 | Msa0569060:CDS |
| TCAATAATTCTTGCTCCTGG+GGG | 0.624254 | 4_1:-70858623 | None:intergenic |
| AGGAGATTCTGAAACCAACA+TGG | 0.625902 | 4_1:+70859296 | Msa0569060:CDS |
| TGCAAATTATACATCATCTG+AGG | 0.627662 | 4_1:-70860847 | None:intergenic |
| GATGTAGTAGAACTTCGGAA+TGG | 0.631161 | 4_1:-70852652 | None:intergenic |
| GGACATACTCCAACTCAGAA+CGG | 0.635435 | 4_1:+70858734 | Msa0569060:CDS |
| ATGGCTTGGCCAATGAACGA+TGG | 0.638310 | 4_1:+70858128 | Msa0569060:CDS |
| GATGTAGATAAAGTTTGGGA+TGG | 0.639080 | 4_1:+70858011 | Msa0569060:CDS |
| ATAAGAAGGAAGCCAACTGT+AGG | 0.639391 | 4_1:+70858207 | Msa0569060:CDS |
| CCACCACTATTATCTAACCT+AGG | 0.640445 | 4_1:+70859070 | Msa0569060:CDS |
| GTCATCAATCAAAGCTGCGG+TGG | 0.640591 | 4_1:-70852511 | None:intergenic |
| AATAACTAAAACCATGTGGA+GGG | 0.640970 | 4_1:-70857356 | None:intergenic |
| GAAGGAAGCCAACTGTAGGA+CGG | 0.641559 | 4_1:+70858211 | Msa0569060:CDS |
| TTTGTCATCAATCAAAGCTG+CGG | 0.641784 | 4_1:-70852514 | None:intergenic |
| CCAAAATGATGGACCTGATG+AGG | 0.644316 | 4_1:+70859210 | Msa0569060:CDS |
| TGCATCATGACAATTCTGAT+GGG | 0.655307 | 4_1:+70857658 | Msa0569060:CDS |
| AGAAAACAAAGGACGCGAAG+GGG | 0.656474 | 4_1:+70859236 | Msa0569060:CDS |
| CTGGGGAGTTAGATGAGCGG+AGG | 0.656706 | 4_1:+70855978 | Msa0569060:exon |
| CCTAGGTTAGATAATAGTGG+TGG | 0.658942 | 4_1:-70859070 | None:intergenic |
| TATGTGCGAGAGAGGCTGAG+AGG | 0.660778 | 4_1:-70858790 | None:intergenic |
| GAATAATCCCCACTCTCATG+GGG | 0.662424 | 4_1:-70857555 | None:intergenic |
| CATGGTGAAGAAAATGACAA+TGG | 0.665590 | 4_1:-70857467 | None:intergenic |
| GGAGCTGCTGACCAGTTCCG+AGG | 0.666304 | 4_1:-70858814 | None:intergenic |
| AGGCTAAGAGATGATAGATG+TGG | 0.672795 | 4_1:+70857969 | Msa0569060:CDS |
| AGGAGCCGGAGCCCTCCACA+TGG | 0.676758 | 4_1:+70857345 | Msa0569060:CDS |
| GCTGAATAACTAAAACCATG+TGG | 0.683862 | 4_1:-70857360 | None:intergenic |
| ATAGAGCAATCATTCAAGCA+GGG | 0.687583 | 4_1:+70857738 | Msa0569060:CDS |
| TGATGAGGCCAAGAAAACAA+AGG | 0.690243 | 4_1:+70859225 | Msa0569060:CDS |
| TTTCCGTGCATAGAAGACGA+TGG | 0.692268 | 4_1:-70852612 | None:intergenic |
| ATAGCAGGGAAAGTAAACAC+AGG | 0.696445 | 4_1:+70857508 | Msa0569060:CDS |
| CGATGATAGGAACAGAACGA+GGG | 0.705763 | 4_1:+70857386 | Msa0569060:CDS |
| TGAAGAAGCTTAAGGCTCTG+GGG | 0.716071 | 4_1:+70855961 | Msa0569060:five_prime_UTR |
| AAGTAACTGGTACAGTACAG+CGG | 0.725762 | 4_1:+70859377 | Msa0569060:CDS |
| GCTCTGGGGAGTTAGATGAG+CGG | 0.746984 | 4_1:+70855975 | Msa0569060:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATACTACTTATTATTATTT+TGG | + | chr4_1:70856653-70856672 | Msa0569060:intron | 10.0% |
| !!! | TTCTTTTAATTTAATAACAA+TGG | - | chr4_1:70858477-70858496 | None:intergenic | 10.0% |
| !! | ATATTTAAGAATAATTATAC+TGG | - | chr4_1:70860143-70860162 | None:intergenic | 10.0% |
| !!! | ATTTTTTAGATATAGACAAT+AGG | + | chr4_1:70855682-70855701 | Msa0569060:intron | 15.0% |
| !!! | AATTGTTTTATAATCTTCTT+TGG | - | chr4_1:70859338-70859357 | None:intergenic | 15.0% |
| !!! | GTAATTTTTCAAAAAAACTA+GGG | - | chr4_1:70859779-70859798 | None:intergenic | 15.0% |
| !!! | TGTAATTTTTCAAAAAAACT+AGG | - | chr4_1:70859780-70859799 | None:intergenic | 15.0% |
| !! | GTTAAATGAAATTAGGATAT+TGG | - | chr4_1:70852593-70852612 | None:intergenic | 20.0% |
| !! | TCATTCTATAAACGTAAATT+AGG | + | chr4_1:70852780-70852799 | Msa0569060:intron | 20.0% |
| !! | CAAAACAAATCAATATAGAT+TGG | - | chr4_1:70853749-70853768 | None:intergenic | 20.0% |
| !!! | CAATCTATATTGATTTGTTT+TGG | + | chr4_1:70853747-70853766 | Msa0569060:intron | 20.0% |
| !!! | ACATTTTAATAAAATGTCAG+AGG | + | chr4_1:70854378-70854397 | Msa0569060:intron | 20.0% |
| !!! | TGTTAGATGCAATTTTTTTA+AGG | - | chr4_1:70854674-70854693 | None:intergenic | 20.0% |
| !! | TGAAAAATAAGTGTGAAAAA+CGG | - | chr4_1:70854852-70854871 | None:intergenic | 20.0% |
| !! | ACCAAAAACGTTATAAAATT+TGG | + | chr4_1:70854877-70854896 | Msa0569060:intron | 20.0% |
| !!! | TATGTGTATTATTTCTTTTC+CGG | + | chr4_1:70854930-70854949 | Msa0569060:intron | 20.0% |
| !! | AACTATTAGAGAACTTATTA+AGG | + | chr4_1:70855304-70855323 | Msa0569060:intron | 20.0% |
| !! | TTTAACTGAAAATCTGTATT+TGG | + | chr4_1:70855606-70855625 | Msa0569060:intron | 20.0% |
| !! | CAATATGCAAAAAATGATTA+TGG | + | chr4_1:70856512-70856531 | Msa0569060:CDS | 20.0% |
| !! | GTAGTATAAAATCTAATACT+CGG | - | chr4_1:70856641-70856660 | None:intergenic | 20.0% |
| !! | TATAAAGAAATGAGTTGTTA+AGG | - | chr4_1:70857114-70857133 | None:intergenic | 20.0% |
| !!! | TTATAGATACCTATTTTCTT+TGG | + | chr4_1:70857129-70857148 | Msa0569060:intron | 20.0% |
| !! | AAAGATAGAAAATTTCTTTC+AGG | - | chr4_1:70857239-70857258 | None:intergenic | 20.0% |
| !!! | TTTAATTATCTGCTTTTCTT+TGG | + | chr4_1:70857299-70857318 | Msa0569060:intron | 20.0% |
| !!! | TTTTTTGGAATCTTTATACT+AGG | - | chr4_1:70859037-70859056 | None:intergenic | 20.0% |
| !!! | TTTTGATGATTCTCTTAAAA+AGG | + | chr4_1:70859099-70859118 | Msa0569060:CDS | 20.0% |
| !! | TTATAAAACAATTGTGAAGA+AGG | + | chr4_1:70859345-70859364 | Msa0569060:CDS | 20.0% |
| !! | TCTATAAAACCAAGTTAAAT+GGG | - | chr4_1:70859541-70859560 | None:intergenic | 20.0% |
| !! | ATCTATAAAACCAAGTTAAA+TGG | - | chr4_1:70859542-70859561 | None:intergenic | 20.0% |
| !!! | TCAGAAATCATTAATTTTTC+TGG | + | chr4_1:70859592-70859611 | Msa0569060:intron | 20.0% |
| !!! | CAGAAATCATTAATTTTTCT+GGG | + | chr4_1:70859593-70859612 | Msa0569060:intron | 20.0% |
| !!! | AGAAATCATTAATTTTTCTG+GGG | + | chr4_1:70859594-70859613 | Msa0569060:intron | 20.0% |
| !! | ATTTCTCCTATTTAAATGAA+CGG | + | chr4_1:70859849-70859868 | Msa0569060:intron | 20.0% |
| !!! | ATGGATCATTTTAAACTTTT+TGG | - | chr4_1:70860017-70860036 | None:intergenic | 20.0% |
| !! | TAAAAAAGTGACTTAAGAAA+AGG | - | chr4_1:70860210-70860229 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTGGGAAAAAAT+AGG | - | chr4_1:70860279-70860298 | None:intergenic | 20.0% |
| !!! | AGACTCTATTTTTTTTTTCT+GGG | - | chr4_1:70860289-70860308 | None:intergenic | 20.0% |
| !! | TGTTGTATAAATATAAACTC+AGG | + | chr4_1:70860883-70860902 | Msa0569060:three_prime_UTR | 20.0% |
| !! | GTTGTATAAATATAAACTCA+GGG | + | chr4_1:70860884-70860903 | Msa0569060:three_prime_UTR | 20.0% |
| !! | TTTTAACATTCTTCCATTCT+AGG | + | chr4_1:70852691-70852710 | Msa0569060:intron | 25.0% |
| ! | TTTAACATTCTTCCATTCTA+GGG | + | chr4_1:70852692-70852711 | Msa0569060:intron | 25.0% |
| ! | TCATAGAATTCCAATAAGAA+TGG | - | chr4_1:70852726-70852745 | None:intergenic | 25.0% |
| ! | TAATTCTGTGTAATGTAAGT+AGG | + | chr4_1:70853039-70853058 | Msa0569060:intron | 25.0% |
| ! | GATATCAATTGAATAACCTA+TGG | - | chr4_1:70853119-70853138 | None:intergenic | 25.0% |
| ! | AAGCTATATTGAAGATCTTA+TGG | + | chr4_1:70853275-70853294 | Msa0569060:intron | 25.0% |
| ! | AATAGGATTATGACTTGATT+GGG | - | chr4_1:70853405-70853424 | None:intergenic | 25.0% |
| ! | AAATAGGATTATGACTTGAT+TGG | - | chr4_1:70853406-70853425 | None:intergenic | 25.0% |
| ! | TTATTCTGCTAACTCAAAAT+AGG | - | chr4_1:70853859-70853878 | None:intergenic | 25.0% |
| !! | TGAGTACTGTTAAATCTTAT+CGG | + | chr4_1:70854024-70854043 | Msa0569060:intron | 25.0% |
| ! | TGAAAAATCTACATTCATGA+TGG | - | chr4_1:70854081-70854100 | None:intergenic | 25.0% |
| !! | TCATGAATGTAGATTTTTCA+TGG | + | chr4_1:70854081-70854100 | Msa0569060:intron | 25.0% |
| !! | ATTTTTCTCAAATGCATAAG+AGG | + | chr4_1:70854172-70854191 | Msa0569060:intron | 25.0% |
| !!! | CATCATTCACATGTTTTTTA+GGG | - | chr4_1:70854348-70854367 | None:intergenic | 25.0% |
| ! | ATAATACCTTCCCTAAAAAA+AGG | + | chr4_1:70854470-70854489 | Msa0569060:intron | 25.0% |
| !!! | TAAGTTTTGGCCTTTTTTTA+GGG | - | chr4_1:70854483-70854502 | None:intergenic | 25.0% |
| !! | AAAGAAATGCAACTAAGTTT+TGG | - | chr4_1:70854496-70854515 | None:intergenic | 25.0% |
| ! | AAACTTAGTTGCATTTCTTT+AGG | + | chr4_1:70854496-70854515 | Msa0569060:intron | 25.0% |
| !!! | CAAAGCATTATTTTAAGTGT+TGG | - | chr4_1:70854804-70854823 | None:intergenic | 25.0% |
| !! | GCCAAATTTTATAACGTTTT+TGG | - | chr4_1:70854881-70854900 | None:intergenic | 25.0% |
| !! | TAAACGGAATTTTCTTTTCT+AGG | - | chr4_1:70854903-70854922 | None:intergenic | 25.0% |
| ! | ATACACATAGGACAAATAAA+CGG | - | chr4_1:70854919-70854938 | None:intergenic | 25.0% |
| ! | GGAAAAGAAATAATACACAT+AGG | - | chr4_1:70854931-70854950 | None:intergenic | 25.0% |
| !!! | ATGTGTATTATTTCTTTTCC+GGG | + | chr4_1:70854931-70854950 | Msa0569060:intron | 25.0% |
| ! | GTAAGATAAAGAATATCCAT+AGG | - | chr4_1:70854982-70855001 | None:intergenic | 25.0% |
| !! | AGTTCTCTAATAGTTTTTCA+GGG | - | chr4_1:70855299-70855318 | None:intergenic | 25.0% |
| !! | AAGTTCTCTAATAGTTTTTC+AGG | - | chr4_1:70855300-70855319 | None:intergenic | 25.0% |
| ! | TGATCTAGATATTAATGAGT+TGG | + | chr4_1:70855328-70855347 | Msa0569060:intron | 25.0% |
| ! | AATAAGAACATAGAACATGA+GGG | - | chr4_1:70855773-70855792 | None:intergenic | 25.0% |
| ! | ATCAGTTATATTTGTGACTA+TGG | + | chr4_1:70855827-70855846 | Msa0569060:intron | 25.0% |
| ! | ATGTCTATAGATTGTTATGA+CGG | + | chr4_1:70856110-70856129 | Msa0569060:intron | 25.0% |
| ! | AAAACACAAACTGTATTCTA+TGG | - | chr4_1:70856164-70856183 | None:intergenic | 25.0% |
| !!! | TTTTGGTTTCTTCTTCATTT+AGG | + | chr4_1:70856670-70856689 | Msa0569060:intron | 25.0% |
| ! | TTAATTAGTATTGCAGTTGT+GGG | - | chr4_1:70856799-70856818 | None:intergenic | 25.0% |
| ! | ATTAATTAGTATTGCAGTTG+TGG | - | chr4_1:70856800-70856819 | None:intergenic | 25.0% |
| ! | GTATACAAGTTTATTATCAC+CGG | - | chr4_1:70856847-70856866 | None:intergenic | 25.0% |
| !! | ATTTTTATGTGACATTTCAG+TGG | + | chr4_1:70856929-70856948 | Msa0569060:intron | 25.0% |
| !!! | ATCAACGTACATTTTTTTAG+AGG | - | chr4_1:70857045-70857064 | None:intergenic | 25.0% |
| !! | AAAAAAATGTACGTTGATTG+TGG | + | chr4_1:70857047-70857066 | Msa0569060:intron | 25.0% |
| ! | ACATTCTAACCAAAGAAAAT+AGG | - | chr4_1:70857141-70857160 | None:intergenic | 25.0% |
| !!! | TGATGGGTTTGATAAAATTT+CGG | + | chr4_1:70857674-70857693 | Msa0569060:CDS | 25.0% |
| !!! | CTTGCAAATTTTTTGCTTTT+GGG | + | chr4_1:70857796-70857815 | Msa0569060:CDS | 25.0% |
| !! | ATTGTAGATTTTCTCATGAT+AGG | + | chr4_1:70857838-70857857 | Msa0569060:CDS | 25.0% |
| !! | ACCATTTTCAATTGATAAGA+AGG | + | chr4_1:70858193-70858212 | Msa0569060:CDS | 25.0% |
| ! | TCCTTCTTATCAATTGAAAA+TGG | - | chr4_1:70858197-70858216 | None:intergenic | 25.0% |
| ! | TCAGCAATAAAATAATTACC+TGG | - | chr4_1:70858389-70858408 | None:intergenic | 25.0% |
| ! | TCAAAAGGGTAGAAAAATTA+AGG | - | chr4_1:70858520-70858539 | None:intergenic | 25.0% |
| ! | AATCTTTATACTAGGAGAAA+AGG | - | chr4_1:70859029-70859048 | None:intergenic | 25.0% |
| !! | AATCATCAAAATTTTGTCCT+AGG | - | chr4_1:70859090-70859109 | None:intergenic | 25.0% |
| !! | TTATTTTCAGATTGAGAGAT+TGG | - | chr4_1:70859154-70859173 | None:intergenic | 25.0% |
| !!! | TGTATAAGTTTGTTAACCTT+TGG | - | chr4_1:70859457-70859476 | None:intergenic | 25.0% |
| ! | AAAGGTTAACAAACTTATAC+AGG | + | chr4_1:70859456-70859475 | Msa0569060:CDS | 25.0% |
| !! | GAAATCATTAATTTTTCTGG+GGG | + | chr4_1:70859595-70859614 | Msa0569060:intron | 25.0% |
| !! | AAATCATTAATTTTTCTGGG+GGG | + | chr4_1:70859596-70859615 | Msa0569060:intron | 25.0% |
| !! | TGAGATTAAATTTTGTACCT+AGG | + | chr4_1:70859662-70859681 | Msa0569060:intron | 25.0% |
| ! | TTTGAACCGTTCATTTAAAT+AGG | - | chr4_1:70859858-70859877 | None:intergenic | 25.0% |
| !! | CAAATTAATTCTTTCTAGAG+TGG | + | chr4_1:70859874-70859893 | Msa0569060:intron | 25.0% |
| ! | AAAGAGATAAGAAAAATTCC+CGG | - | chr4_1:70859978-70859997 | None:intergenic | 25.0% |
| !!! | GTTATTTTTAAGGCTCTATT+TGG | - | chr4_1:70860053-70860072 | None:intergenic | 25.0% |
| !!! | CAATTGCTTGGTTATTTTTA+AGG | - | chr4_1:70860063-70860082 | None:intergenic | 25.0% |
| ! | TAAAAATAACCAAGCAATTG+AGG | + | chr4_1:70860063-70860082 | Msa0569060:intron | 25.0% |
| !!! | GAGACTCTATTTTTTTTTTC+TGG | - | chr4_1:70860290-70860309 | None:intergenic | 25.0% |
| ! | ATCCATCATATTATTTCAAC+TGG | + | chr4_1:70860467-70860486 | Msa0569060:intron | 25.0% |
| ! | AACCAGTTGAAATAATATGA+TGG | - | chr4_1:70860472-70860491 | None:intergenic | 25.0% |
| ! | TAGTTTACAAACCAAACATT+AGG | + | chr4_1:70860968-70860987 | Msa0569060:three_prime_UTR | 25.0% |
| GACGATGGTTAAATGAAATT+AGG | - | chr4_1:70852600-70852619 | None:intergenic | 30.0% | |
| GAATGGAAGAATGTTAAAAG+AGG | - | chr4_1:70852690-70852709 | None:intergenic | 30.0% | |
| AGAATTCCAATAAGAATGGA+AGG | - | chr4_1:70852722-70852741 | None:intergenic | 30.0% | |
| TTCAAACAGAATAGAGTACA+AGG | - | chr4_1:70852757-70852776 | None:intergenic | 30.0% | |
| GATTCAGAAAACAACATTAG+CGG | - | chr4_1:70852812-70852831 | None:intergenic | 30.0% | |
| AGAAACTGATCCAACATTAT+CGG | + | chr4_1:70852867-70852886 | Msa0569060:intron | 30.0% | |
| GGTTATTCAATTGATATCGA+TGG | + | chr4_1:70853121-70853140 | Msa0569060:intron | 30.0% | |
| ! | TTAAGTTGCTTATCCAAACA+GGG | - | chr4_1:70853154-70853173 | None:intergenic | 30.0% |
| ! | ATTAAGTTGCTTATCCAAAC+AGG | - | chr4_1:70853155-70853174 | None:intergenic | 30.0% |
| TAATCTTCAGGTCAACAAAT+AGG | - | chr4_1:70853422-70853441 | None:intergenic | 30.0% | |
| ! | TATTTGTTGACCTGAAGATT+AGG | + | chr4_1:70853421-70853440 | Msa0569060:intron | 30.0% |
| ! | CCAAGTGGGTATATTTTATA+TGG | - | chr4_1:70853488-70853507 | None:intergenic | 30.0% |
| CCATATAAAATATACCCACT+TGG | + | chr4_1:70853485-70853504 | Msa0569060:intron | 30.0% | |
| ! | GTATTTTCTTGTCATGTTCA+TGG | + | chr4_1:70853629-70853648 | Msa0569060:intron | 30.0% |
| TGGTGTAAATATGTTCACAA+TGG | + | chr4_1:70853679-70853698 | Msa0569060:intron | 30.0% | |
| TTATGAGAATATGTATCCCT+TGG | + | chr4_1:70854107-70854126 | Msa0569060:intron | 30.0% | |
| !! | TTAAGACTTGCTATTGTCAT+TGG | + | chr4_1:70854207-70854226 | Msa0569060:intron | 30.0% |
| TTGTCATTGGCAAAAGATTT+AGG | + | chr4_1:70854220-70854239 | Msa0569060:intron | 30.0% | |
| !!! | TGTTTTTTAGGGTGTAGAAT+GGG | - | chr4_1:70854337-70854356 | None:intergenic | 30.0% |
| !!! | ATGTTTTTTAGGGTGTAGAA+TGG | - | chr4_1:70854338-70854357 | None:intergenic | 30.0% |
| !!! | GCATCATTCACATGTTTTTT+AGG | - | chr4_1:70854349-70854368 | None:intergenic | 30.0% |
| TTTAATAAAATGTCAGAGGC+TGG | + | chr4_1:70854382-70854401 | Msa0569060:intron | 30.0% | |
| !! | CTAAGTTTTGGCCTTTTTTT+AGG | - | chr4_1:70854484-70854503 | None:intergenic | 30.0% |
| ! | TTCTTTAGGTGTTTTTCTTG+TGG | + | chr4_1:70854510-70854529 | Msa0569060:intron | 30.0% |
| AACAAACTTCGAGAAAATTG+TGG | - | chr4_1:70854579-70854598 | None:intergenic | 30.0% | |
| ATTATCACAGATTTCTGTTG+TGG | + | chr4_1:70854761-70854780 | Msa0569060:intron | 30.0% | |
| AAAATAAGTGTGAAAAACGG+AGG | - | chr4_1:70854849-70854868 | None:intergenic | 30.0% | |
| TCTGTATGTTGAATTGTACA+AGG | + | chr4_1:70854956-70854975 | Msa0569060:intron | 30.0% | |
| TATTGTATGGAATGTGATGT+TGG | + | chr4_1:70855019-70855038 | Msa0569060:intron | 30.0% | |
| ACAATATTTGAGAGAGAGTT+GGG | + | chr4_1:70855138-70855157 | Msa0569060:intron | 30.0% | |
| AACACCTATCATTGAAAAGA+TGG | + | chr4_1:70855163-70855182 | Msa0569060:intron | 30.0% | |
| TTTGGATATTCTTTATCGAG+AGG | + | chr4_1:70855437-70855456 | Msa0569060:intron | 30.0% | |
| AAACTGTTAATGATTCCTCA+TGG | + | chr4_1:70855543-70855562 | Msa0569060:intron | 30.0% | |
| CTGAAAATCTGTATTTGGAT+AGG | + | chr4_1:70855611-70855630 | Msa0569060:intron | 30.0% | |
| !! | CTTACCCTGTATTTGTTTTT+AGG | + | chr4_1:70855732-70855751 | Msa0569060:intron | 30.0% |
| TCCTCCTAAAAACAAATACA+GGG | - | chr4_1:70855739-70855758 | None:intergenic | 30.0% | |
| ATCCTCCTAAAAACAAATAC+AGG | - | chr4_1:70855740-70855759 | None:intergenic | 30.0% | |
| GAATAAGAACATAGAACATG+AGG | - | chr4_1:70855774-70855793 | None:intergenic | 30.0% | |
| TTACTAAAAGCAGTAGTTCA+AGG | + | chr4_1:70856294-70856313 | Msa0569060:CDS | 30.0% | |
| ATGCAAAAAATGATTATGGC+AGG | + | chr4_1:70856516-70856535 | Msa0569060:CDS | 30.0% | |
| ! | TTCATTTAGGATTGAGTCTA+AGG | + | chr4_1:70856683-70856702 | Msa0569060:intron | 30.0% |
| AGCCAAAGTTTCTTAATCTA+GGG | - | chr4_1:70856990-70857009 | None:intergenic | 30.0% | |
| TAGCCAAAGTTTCTTAATCT+AGG | - | chr4_1:70856991-70857010 | None:intergenic | 30.0% | |
| ! | GTTTAGAAGCTAAAGCTTTT+AGG | + | chr4_1:70857018-70857037 | Msa0569060:intron | 30.0% |
| AATAACTAAAACCATGTGGA+GGG | - | chr4_1:70857359-70857378 | None:intergenic | 30.0% | |
| AGCTTGCATTTATTATGCAA+AGG | + | chr4_1:70857602-70857621 | Msa0569060:CDS | 30.0% | |
| GCTTGCATTTATTATGCAAA+GGG | + | chr4_1:70857603-70857622 | Msa0569060:CDS | 30.0% | |
| CCAAAAGCAAAAAATTTGCA+AGG | - | chr4_1:70857798-70857817 | None:intergenic | 30.0% | |
| !!! | CCTTGCAAATTTTTTGCTTT+TGG | + | chr4_1:70857795-70857814 | Msa0569060:CDS | 30.0% |
| !! | TTTTTGCTTTTGGGAATTGT+CGG | + | chr4_1:70857805-70857824 | Msa0569060:CDS | 30.0% |
| ATCCCAAACTTTATCTACAT+CGG | - | chr4_1:70858012-70858031 | None:intergenic | 30.0% | |
| GACAACAAAAATGGAATCAT+AGG | + | chr4_1:70858086-70858105 | Msa0569060:CDS | 30.0% | |
| ATGCTCATCTTTAATATGAC+TGG | - | chr4_1:70858342-70858361 | None:intergenic | 30.0% | |
| ! | AATTTTTCTACCCTTTTGAC+AGG | + | chr4_1:70858521-70858540 | Msa0569060:intron | 30.0% |
| ! | TTTTCTCAGTTGAAAGTTTC+TGG | - | chr4_1:70858661-70858680 | None:intergenic | 30.0% |
| TTAGAGTAGAATGAACTTGT+GGG | - | chr4_1:70858838-70858857 | None:intergenic | 30.0% | |
| ! | TTTAGAGTAGAATGAACTTG+TGG | - | chr4_1:70858839-70858858 | None:intergenic | 30.0% |
| TTGATGAATGTCATAGAAAC+AGG | - | chr4_1:70858917-70858936 | None:intergenic | 30.0% | |
| CCATTTGCACTAATATTCAT+GGG | - | chr4_1:70858995-70859014 | None:intergenic | 30.0% | |
| CCATGAATATTAGTGCAAAT+GGG | + | chr4_1:70858993-70859012 | Msa0569060:CDS | 30.0% | |
| CATGAATATTAGTGCAAATG+GGG | + | chr4_1:70858994-70859013 | Msa0569060:CDS | 30.0% | |
| TTTATACTAGGAGAAAAGGT+TGG | - | chr4_1:70859025-70859044 | None:intergenic | 30.0% | |
| AAAGATTCCAAAAAATGCAG+TGG | + | chr4_1:70859042-70859061 | Msa0569060:CDS | 30.0% | |
| TAAAAAGGAGACTAACGAAA+CGG | + | chr4_1:70859114-70859133 | Msa0569060:CDS | 30.0% | |
| TCGTGCATTTAAATCTTCAT+TGG | + | chr4_1:70859261-70859280 | Msa0569060:CDS | 30.0% | |
| TTCATTGGTAGAGCTTATTA+AGG | + | chr4_1:70859276-70859295 | Msa0569060:CDS | 30.0% | |
| ! | ATTTTACCATCTTTCCATGT+TGG | - | chr4_1:70859313-70859332 | None:intergenic | 30.0% |
| AAGGTTACTGATAAAGTAAC+TGG | + | chr4_1:70859364-70859383 | Msa0569060:CDS | 30.0% | |
| TTTATCAGTTTCGAAACCAA+AGG | + | chr4_1:70859438-70859457 | Msa0569060:CDS | 30.0% | |
| ATTTCCGTCATATGTATGAA+GGG | + | chr4_1:70859500-70859519 | Msa0569060:intron | 30.0% | |
| TATAGACAAATTGAACACCT+AGG | - | chr4_1:70859682-70859701 | None:intergenic | 30.0% | |
| AAAGAACAGTGATGAGAATT+TGG | - | chr4_1:70859807-70859826 | None:intergenic | 30.0% | |
| !! | TTAATTCTTTCTAGAGTGGT+TGG | + | chr4_1:70859878-70859897 | Msa0569060:intron | 30.0% |
| !! | AGTGATTTTAATGGTGGAAA+GGG | + | chr4_1:70859914-70859933 | Msa0569060:intron | 30.0% |
| TGTAAATAATGTGAACCTCA+AGG | + | chr4_1:70860113-70860132 | Msa0569060:intron | 30.0% | |
| !!! | AAAGATGTCCTTGTTTTCAT+AGG | + | chr4_1:70860319-70860338 | Msa0569060:intron | 30.0% |
| !!! | AAGATGTCCTTGTTTTCATA+GGG | + | chr4_1:70860320-70860339 | Msa0569060:intron | 30.0% |
| ! | TAAGAGTTTGTTTCTTGACT+TGG | - | chr4_1:70860383-70860402 | None:intergenic | 30.0% |
| !! | TGATGGATTCAAGAAAAAGA+TGG | - | chr4_1:70860455-70860474 | None:intergenic | 30.0% |
| ! | ACTTTATTCTCTTTTTGTGC+AGG | + | chr4_1:70860665-70860684 | Msa0569060:intron | 30.0% |
| CAAGCATAAATAAATACGCA+AGG | - | chr4_1:70860789-70860808 | None:intergenic | 30.0% | |
| TGCAAATTATACATCATCTG+AGG | - | chr4_1:70860850-70860869 | None:intergenic | 30.0% | |
| AATAACAGTTGCCTAATGTT+TGG | - | chr4_1:70860982-70861001 | None:intergenic | 30.0% | |
| TTTGTCATCAATCAAAGCTG+CGG | - | chr4_1:70852517-70852536 | None:intergenic | 35.0% | |
| ATTAGGATATTGGAGAGTGA+GGG | - | chr4_1:70852583-70852602 | None:intergenic | 35.0% | |
| AATTAGGATATTGGAGAGTG+AGG | - | chr4_1:70852584-70852603 | None:intergenic | 35.0% | |
| AGTGAGATGTAGTAGAACTT+CGG | - | chr4_1:70852660-70852679 | None:intergenic | 35.0% | |
| ! | GGTTTTCCTTCCATTCTTAT+TGG | + | chr4_1:70852713-70852732 | Msa0569060:intron | 35.0% |
| GAAACTGATCCAACATTATC+GGG | + | chr4_1:70852868-70852887 | Msa0569060:intron | 35.0% | |
| ! | CTACTAGTCTCCATATTACT+TGG | - | chr4_1:70852896-70852915 | None:intergenic | 35.0% |
| TAGCATAAGAAATAGACGCT+CGG | + | chr4_1:70852913-70852932 | Msa0569060:intron | 35.0% | |
| TATCAGGAGACAATCGAATA+TGG | - | chr4_1:70852959-70852978 | None:intergenic | 35.0% | |
| CCAAAAGATTTGCAGTTAAG+GGG | - | chr4_1:70852986-70853005 | None:intergenic | 35.0% | |
| CCCAAAAGATTTGCAGTTAA+GGG | - | chr4_1:70852987-70853006 | None:intergenic | 35.0% | |
| ! | CCCTTAACTGCAAATCTTTT+GGG | + | chr4_1:70852984-70853003 | Msa0569060:intron | 35.0% |
| ACCCAAAAGATTTGCAGTTA+AGG | - | chr4_1:70852988-70853007 | None:intergenic | 35.0% | |
| AATAACCTATGGTCAAGCAA+GGG | - | chr4_1:70853108-70853127 | None:intergenic | 35.0% | |
| AAACAAAACGCCTAATCTTC+AGG | - | chr4_1:70853434-70853453 | None:intergenic | 35.0% | |
| TTCCAAAATTCCAACTCTAC+TGG | - | chr4_1:70853540-70853559 | None:intergenic | 35.0% | |
| AAGTGTATCCAATTAGCACT+TGG | - | chr4_1:70853601-70853620 | None:intergenic | 35.0% | |
| ! | TTTTCTTGTCATGTTCATGG+AGG | + | chr4_1:70853632-70853651 | Msa0569060:intron | 35.0% |
| TCGGCTACATAACTCAAAAT+AGG | - | chr4_1:70853798-70853817 | None:intergenic | 35.0% | |
| GCTAGATTGTTGTAGTTGTT+TGG | + | chr4_1:70854134-70854153 | Msa0569060:intron | 35.0% | |
| TATATCAGTCTGTGAGATCA+AGG | + | chr4_1:70854265-70854284 | Msa0569060:intron | 35.0% | |
| ATATCAGTCTGTGAGATCAA+GGG | + | chr4_1:70854266-70854285 | Msa0569060:intron | 35.0% | |
| GTGAGATCAAGGGTTTAAAT+AGG | + | chr4_1:70854276-70854295 | Msa0569060:intron | 35.0% | |
| !!! | TTTTGGCCTTTTTTTAGGGA+AGG | - | chr4_1:70854479-70854498 | None:intergenic | 35.0% |
| !!! | TCTCGAAGTTTGTTTTAAGC+AGG | + | chr4_1:70854585-70854604 | Msa0569060:intron | 35.0% |
| CAATTCAACATACAGATACC+CGG | - | chr4_1:70854952-70854971 | None:intergenic | 35.0% | |
| GTAAGAGCGATACTATTGTA+TGG | + | chr4_1:70855006-70855025 | Msa0569060:intron | 35.0% | |
| !! | ACTCTCGTGTTGATTCTTTA+CGG | - | chr4_1:70855046-70855065 | None:intergenic | 35.0% |
| AAAATAAGCGAACATAGACG+AGG | + | chr4_1:70855066-70855085 | Msa0569060:intron | 35.0% | |
| AGGATGTTGTGTTAGATGTA+TGG | + | chr4_1:70855086-70855105 | Msa0569060:intron | 35.0% | |
| GACAATATTTGAGAGAGAGT+TGG | + | chr4_1:70855137-70855156 | Msa0569060:intron | 35.0% | |
| ! | TCTGCCATCTTTTCAATGAT+AGG | - | chr4_1:70855170-70855189 | None:intergenic | 35.0% |
| AAACTCGAATTAGGTGGTTT+GGG | + | chr4_1:70855189-70855208 | Msa0569060:intron | 35.0% | |
| AGTAAGGAGAGTAAATCAGA+TGG | + | chr4_1:70855241-70855260 | Msa0569060:intron | 35.0% | |
| !!! | ATAAAGCCTGGTTGTTGTTT+TGG | + | chr4_1:70855419-70855438 | Msa0569060:intron | 35.0% |
| GAATATCCAAAACAACAACC+AGG | - | chr4_1:70855428-70855447 | None:intergenic | 35.0% | |
| ACGAATAGAAAACCTTCCTT+AGG | - | chr4_1:70855491-70855510 | None:intergenic | 35.0% | |
| !!! | ACCCTGTATTTGTTTTTAGG+AGG | + | chr4_1:70855735-70855754 | Msa0569060:intron | 35.0% |
| AACCAAAGTGAAGAAGCTTA+AGG | + | chr4_1:70855953-70855972 | Msa0569060:five_prime_UTR | 35.0% | |
| CAGAAAGCTATCTTCAAACT+GGG | + | chr4_1:70856004-70856023 | Msa0569060:CDS | 35.0% | |
| GGCATAAGTTCTTCAGAATA+TGG | + | chr4_1:70856131-70856150 | Msa0569060:intron | 35.0% | |
| ! | GCTTTTAGTAACACCTGTAA+AGG | - | chr4_1:70856285-70856304 | None:intergenic | 35.0% |
| ! | AAGCAGTAGTTCAAGGTATT+TGG | + | chr4_1:70856301-70856320 | Msa0569060:CDS | 35.0% |
| ATACGCTAAAACCAAGAATG+AGG | + | chr4_1:70856333-70856352 | Msa0569060:CDS | 35.0% | |
| CAATTGTTGCATCCAAAACT+TGG | - | chr4_1:70856418-70856437 | None:intergenic | 35.0% | |
| ACAATTGCAAAAGACACTGA+TGG | + | chr4_1:70856431-70856450 | Msa0569060:CDS | 35.0% | |
| !! | TACAATATGAAAGTGTCTCC+AGG | + | chr4_1:70856458-70856477 | Msa0569060:CDS | 35.0% |
| !! | ACAATATGAAAGTGTCTCCA+GGG | + | chr4_1:70856459-70856478 | Msa0569060:CDS | 35.0% |
| GTTTGAGGAATGGAACAATA+GGG | + | chr4_1:70856481-70856500 | Msa0569060:CDS | 35.0% | |
| ! | ACCATTAGTTTCCAACATCA+GGG | - | chr4_1:70856578-70856597 | None:intergenic | 35.0% |
| ! | AACCATTAGTTTCCAACATC+AGG | - | chr4_1:70856579-70856598 | None:intergenic | 35.0% |
| ! | GTTTCTTAATCTAGGGCTAT+AGG | - | chr4_1:70856983-70857002 | None:intergenic | 35.0% |
| AGCCCTAGATTAAGAAACTT+TGG | + | chr4_1:70856985-70857004 | Msa0569060:intron | 35.0% | |
| ! | TGGATATTTTCAGACGCAAT+TGG | + | chr4_1:70857273-70857292 | Msa0569060:intron | 35.0% |
| GAATAACTAAAACCATGTGG+AGG | - | chr4_1:70857360-70857379 | None:intergenic | 35.0% | |
| GCTGAATAACTAAAACCATG+TGG | - | chr4_1:70857363-70857382 | None:intergenic | 35.0% | |
| !!! | CTTGTAGAGATTTTGCTGTT+GGG | + | chr4_1:70857427-70857446 | Msa0569060:CDS | 35.0% |
| CCTCATAACTTTGCTTATCA+TGG | - | chr4_1:70857488-70857507 | None:intergenic | 35.0% | |
| CCATGATAAGCAAAGTTATG+AGG | + | chr4_1:70857485-70857504 | Msa0569060:CDS | 35.0% | |
| TCATGGGGATTAGAATATCT+GGG | - | chr4_1:70857543-70857562 | None:intergenic | 35.0% | |
| GCATTTATTATGCAAAGGGA+AGG | + | chr4_1:70857607-70857626 | Msa0569060:CDS | 35.0% | |
| TGCATCATGACAATTCTGAT+GGG | + | chr4_1:70857658-70857677 | Msa0569060:CDS | 35.0% | |
| AGATGAATCATCTAGGGAAA+GGG | + | chr4_1:70857698-70857717 | Msa0569060:CDS | 35.0% | |
| ATAGAGCAATCATTCAAGCA+GGG | + | chr4_1:70857738-70857757 | Msa0569060:CDS | 35.0% | |
| ATTTACCAGCCCTAGATTAA+GGG | + | chr4_1:70857866-70857885 | Msa0569060:CDS | 35.0% | |
| ACCTATCATCCCTTAATCTA+GGG | - | chr4_1:70857878-70857897 | None:intergenic | 35.0% | |
| GATGTAGATAAAGTTTGGGA+TGG | + | chr4_1:70858011-70858030 | Msa0569060:CDS | 35.0% | |
| TTGGTTGAGGACAACAAAAA+TGG | + | chr4_1:70858077-70858096 | Msa0569060:CDS | 35.0% | |
| ATGTCTCCTGATTGGAATTA+TGG | + | chr4_1:70858305-70858324 | Msa0569060:CDS | 35.0% | |
| GAATATAACTGCTTCCCATT+TGG | + | chr4_1:70858568-70858587 | Msa0569060:CDS | 35.0% | |
| TTGACTTTGTCCAACCAAAT+GGG | - | chr4_1:70858585-70858604 | None:intergenic | 35.0% | |
| TTCAATAATTCTTGCTCCTG+GGG | - | chr4_1:70858627-70858646 | None:intergenic | 35.0% | |
| CTTCAATAATTCTTGCTCCT+GGG | - | chr4_1:70858628-70858647 | None:intergenic | 35.0% | |
| AATGCAAGCCTATCACAAAT+CGG | + | chr4_1:70858707-70858726 | Msa0569060:CDS | 35.0% | |
| TCTTCGGAAGCAAAATTGAA+GGG | + | chr4_1:70858882-70858901 | Msa0569060:CDS | 35.0% | |
| TACTGTTTCAATCCAATAGC+AGG | - | chr4_1:70858947-70858966 | None:intergenic | 35.0% | |
| TGATCCAATGTTTGACAGTA+TGG | + | chr4_1:70858967-70858986 | Msa0569060:CDS | 35.0% | |
| CCCATGAATATTAGTGCAAA+TGG | + | chr4_1:70858992-70859011 | Msa0569060:CDS | 35.0% | |
| CCCATTTGCACTAATATTCA+TGG | - | chr4_1:70858996-70859015 | None:intergenic | 35.0% | |
| !!! | GGAATTTCCACTGCATTTTT+TGG | - | chr4_1:70859052-70859071 | None:intergenic | 35.0% |
| TGTCCTAGGTTAGATAATAG+TGG | - | chr4_1:70859076-70859095 | None:intergenic | 35.0% | |
| TACAGAAGAGAATAGTCCTA+TGG | + | chr4_1:70859177-70859196 | Msa0569060:CDS | 35.0% | |
| ACAGAAGAGAATAGTCCTAT+GGG | + | chr4_1:70859178-70859197 | Msa0569060:CDS | 35.0% | |
| AACAAACTTATACAGGTCAG+TGG | + | chr4_1:70859463-70859482 | Msa0569060:intron | 35.0% | |
| GATTTCCGTCATATGTATGA+AGG | + | chr4_1:70859499-70859518 | Msa0569060:intron | 35.0% | |
| TGAACCCTTCATACATATGA+CGG | - | chr4_1:70859507-70859526 | None:intergenic | 35.0% | |
| TTTGATGTGGAAAGAGTTGT+AGG | + | chr4_1:70859624-70859643 | Msa0569060:intron | 35.0% | |
| AAATATACATCGATCTCCCA+TGG | + | chr4_1:70859730-70859749 | Msa0569060:intron | 35.0% | |
| AATATACATCGATCTCCCAT+GGG | + | chr4_1:70859731-70859750 | Msa0569060:intron | 35.0% | |
| ATAATTAGCGTAAACCCCAT+GGG | - | chr4_1:70859749-70859768 | None:intergenic | 35.0% | |
| TATAATTAGCGTAAACCCCA+TGG | - | chr4_1:70859750-70859769 | None:intergenic | 35.0% | |
| AACAGTGATGAGAATTTGGT+AGG | - | chr4_1:70859803-70859822 | None:intergenic | 35.0% | |
| ! | TACAAGGGGAGTGATTTTAA+TGG | + | chr4_1:70859905-70859924 | Msa0569060:intron | 35.0% |
| !! | GAGTGATTTTAATGGTGGAA+AGG | + | chr4_1:70859913-70859932 | Msa0569060:intron | 35.0% |
| !! | GTGATTTTAATGGTGGAAAG+GGG | + | chr4_1:70859915-70859934 | Msa0569060:intron | 35.0% |
| AATAACCAAGCAATTGAGGA+TGG | + | chr4_1:70860067-70860086 | Msa0569060:intron | 35.0% | |
| AATTATACTGGACTACCTTG+AGG | - | chr4_1:70860131-70860150 | None:intergenic | 35.0% | |
| AACCTTACCCTATGAAAACA+AGG | - | chr4_1:70860330-70860349 | None:intergenic | 35.0% | |
| ACTCTTAGCTCACTAAGTTA+AGG | + | chr4_1:70860396-70860415 | Msa0569060:intron | 35.0% | |
| TCTACTTCTACCTTATGCAT+TGG | + | chr4_1:70860428-70860447 | Msa0569060:intron | 35.0% | |
| AAAAGATGGTCCAATGCATA+AGG | - | chr4_1:70860441-70860460 | None:intergenic | 35.0% | |
| GTAATTGTAGATTCAGAAGC+TGG | - | chr4_1:70860573-70860592 | None:intergenic | 35.0% | |
| TTACCTGTTTGATGCAATTG+AGG | + | chr4_1:70861008-70861027 | Msa0569060:three_prime_UTR | 35.0% | |
| TACCTGTTTGATGCAATTGA+GGG | + | chr4_1:70861009-70861028 | Msa0569060:three_prime_UTR | 35.0% | |
| TAACCATCGTCTTCTATGCA+CGG | + | chr4_1:70852609-70852628 | Msa0569060:five_prime_UTR | 40.0% | |
| TTCTATGCACGGAAAGAGAT+AGG | + | chr4_1:70852620-70852639 | Msa0569060:five_prime_UTR | 40.0% | |
| TCTATGCACGGAAAGAGATA+GGG | + | chr4_1:70852621-70852640 | Msa0569060:five_prime_UTR | 40.0% | |
| GATGTAGTAGAACTTCGGAA+TGG | - | chr4_1:70852655-70852674 | None:intergenic | 40.0% | |
| ATGGAAGGAAAACCCTAGAA+TGG | - | chr4_1:70852707-70852726 | None:intergenic | 40.0% | |
| CAGAAAACAACATTAGCGGT+TGG | - | chr4_1:70852808-70852827 | None:intergenic | 40.0% | |
| TTATCGGGCTCCAAGTAATA+TGG | + | chr4_1:70852883-70852902 | Msa0569060:intron | 40.0% | |
| AGCATAAGAAATAGACGCTC+GGG | + | chr4_1:70852914-70852933 | Msa0569060:intron | 40.0% | |
| GCAGTTAAGGGGTTTATATC+AGG | - | chr4_1:70852975-70852994 | None:intergenic | 40.0% | |
| ! | CCCCTTAACTGCAAATCTTT+TGG | + | chr4_1:70852983-70853002 | Msa0569060:intron | 40.0% |
| !! | TCTTTTGGGTGTGTATGTAC+AGG | + | chr4_1:70852998-70853017 | Msa0569060:intron | 40.0% |
| GAATAACCTATGGTCAAGCA+AGG | - | chr4_1:70853109-70853128 | None:intergenic | 40.0% | |
| ! | AACTCTACTGGCTGATGTAT+CGG | - | chr4_1:70853528-70853547 | None:intergenic | 40.0% |
| ! | AGCCAGTAGAGTTGGAATTT+TGG | + | chr4_1:70853535-70853554 | Msa0569060:intron | 40.0% |
| CAACAAGACCAAGTGCTAAT+TGG | + | chr4_1:70853590-70853609 | Msa0569060:intron | 40.0% | |
| ACCAACTTACTCAAAGTAGC+TGG | + | chr4_1:70853659-70853678 | Msa0569060:intron | 40.0% | |
| ! | ACCAGCTACTTTGAGTAAGT+TGG | - | chr4_1:70853663-70853682 | None:intergenic | 40.0% |
| TGTCAAACATTGCTTGTGAG+AGG | - | chr4_1:70853713-70853732 | None:intergenic | 40.0% | |
| ! | TAAGCCTTATCCCACTAAGT+GGG | - | chr4_1:70853822-70853841 | None:intergenic | 40.0% |
| ! | TTAAGCCTTATCCCACTAAG+TGG | - | chr4_1:70853823-70853842 | None:intergenic | 40.0% |
| CTTTGATCTGTCTTGTGAGT+GGG | + | chr4_1:70853988-70854007 | Msa0569060:intron | 40.0% | |
| CAACAATCTAGCACTTCCAA+GGG | - | chr4_1:70854126-70854145 | None:intergenic | 40.0% | |
| ACAACAATCTAGCACTTCCA+AGG | - | chr4_1:70854127-70854146 | None:intergenic | 40.0% | |
| GTGTGTGTATGTATCTAGCT+CGG | + | chr4_1:70854432-70854451 | Msa0569060:intron | 40.0% | |
| !! | AACCACATGAAAAGCACCAA+AGG | + | chr4_1:70854629-70854648 | Msa0569060:intron | 40.0% |
| !!! | TTCCTTTGGTGCTTTTCATG+TGG | - | chr4_1:70854634-70854653 | None:intergenic | 40.0% |
| ATACTTACGCGCATTTCCTT+TGG | - | chr4_1:70854648-70854667 | None:intergenic | 40.0% | |
| GTTGTGGAAGAAAATACGCA+CGG | + | chr4_1:70854777-70854796 | Msa0569060:intron | 40.0% | |
| TTGTGGAAGAAAATACGCAC+GGG | + | chr4_1:70854778-70854797 | Msa0569060:intron | 40.0% | |
| AACGGAGGAATAACAGTAAG+AGG | - | chr4_1:70854834-70854853 | None:intergenic | 40.0% | |
| GTTGAATTGTACAAGGCCTA+TGG | + | chr4_1:70854963-70854982 | Msa0569060:intron | 40.0% | |
| AGATGGCAGAAACTCGAATT+AGG | + | chr4_1:70855180-70855199 | Msa0569060:intron | 40.0% | |
| GAAACTCGAATTAGGTGGTT+TGG | + | chr4_1:70855188-70855207 | Msa0569060:intron | 40.0% | |
| GACATCTAGATTCTGCAGTA+AGG | + | chr4_1:70855225-70855244 | Msa0569060:intron | 40.0% | |
| GAGAGTAGTCAAATCACTAG+AGG | + | chr4_1:70855263-70855282 | Msa0569060:intron | 40.0% | |
| CTTTATCCTACTAAGTGGGT+TGG | - | chr4_1:70855405-70855424 | None:intergenic | 40.0% | |
| ! | CAGGCTTTATCCTACTAAGT+GGG | - | chr4_1:70855409-70855428 | None:intergenic | 40.0% |
| GGATATTCTTTATCGAGAGG+AGG | + | chr4_1:70855440-70855459 | Msa0569060:intron | 40.0% | |
| GTAGGCATATAAGCAACCTA+AGG | + | chr4_1:70855472-70855491 | Msa0569060:intron | 40.0% | |
| GCATATAAGCAACCTAAGGA+AGG | + | chr4_1:70855476-70855495 | Msa0569060:intron | 40.0% | |
| AAGAACATAGAACATGAGGG+AGG | - | chr4_1:70855770-70855789 | None:intergenic | 40.0% | |
| ! | TGCTTGAAGCATCAGAGTTT+GGG | + | chr4_1:70855863-70855882 | Msa0569060:intron | 40.0% |
| AGCCTTAAGCTTCTTCACTT+TGG | - | chr4_1:70855958-70855977 | None:intergenic | 40.0% | |
| GCAGAAAGCTATCTTCAAAC+TGG | + | chr4_1:70856003-70856022 | Msa0569060:CDS | 40.0% | |
| AAACAAACAGGCCTTACTCT+CGG | - | chr4_1:70856057-70856076 | None:intergenic | 40.0% | |
| TCGCAGAAACACAAACAAAC+AGG | - | chr4_1:70856069-70856088 | None:intergenic | 40.0% | |
| GCAATTGCTTATGGTGCATA+TGG | - | chr4_1:70856250-70856269 | None:intergenic | 40.0% | |
| ACCATAAGCAATTGCAGTCT+GGG | + | chr4_1:70856255-70856274 | Msa0569060:intron | 40.0% | |
| TTGCGTGAAAACCTCATTCT+TGG | - | chr4_1:70856347-70856366 | None:intergenic | 40.0% | |
| ! | AAGAATGAGGTTTTCACGCA+AGG | + | chr4_1:70856346-70856365 | Msa0569060:CDS | 40.0% |
| GGTTTGAGGAATGGAACAAT+AGG | + | chr4_1:70856480-70856499 | Msa0569060:CDS | 40.0% | |
| TTAGTTTCCAACATCAGGGT+CGG | - | chr4_1:70856574-70856593 | None:intergenic | 40.0% | |
| ACCCTGATGTTGGAAACTAA+TGG | + | chr4_1:70856574-70856593 | Msa0569060:intron | 40.0% | |
| CTGAGCTCAATAAGCTTAAC+CGG | + | chr4_1:70856825-70856844 | Msa0569060:intron | 40.0% | |
| ACCCAGATAGACACAATACA+CGG | - | chr4_1:70857087-70857106 | None:intergenic | 40.0% | |
| ATTCCGTATCTTCAACTGCA+AGG | + | chr4_1:70857188-70857207 | Msa0569060:intron | 40.0% | |
| CTACCTTGCAGTTGAAGATA+CGG | - | chr4_1:70857194-70857213 | None:intergenic | 40.0% | |
| !! | ATCTTTGAGATGTCTGTGTG+TGG | + | chr4_1:70857253-70857272 | Msa0569060:intron | 40.0% |
| ! | GCTTTTCTTTGGATATTGCC+AGG | + | chr4_1:70857310-70857329 | Msa0569060:intron | 40.0% |
| GTTATTCAGCTGTCGATGAT+AGG | + | chr4_1:70857373-70857392 | Msa0569060:CDS | 40.0% | |
| CCAACAGCAAAATCTCTACA+AGG | - | chr4_1:70857429-70857448 | None:intergenic | 40.0% | |
| !! | CCTTGTAGAGATTTTGCTGT+TGG | + | chr4_1:70857426-70857445 | Msa0569060:CDS | 40.0% |
| AGCAAAGTTATGAGGATAGC+AGG | + | chr4_1:70857493-70857512 | Msa0569060:CDS | 40.0% | |
| GCAAAGTTATGAGGATAGCA+GGG | + | chr4_1:70857494-70857513 | Msa0569060:CDS | 40.0% | |
| ATAGCAGGGAAAGTAAACAC+AGG | + | chr4_1:70857508-70857527 | Msa0569060:CDS | 40.0% | |
| TTAGAATATCTGGGTCCATC+TGG | - | chr4_1:70857534-70857553 | None:intergenic | 40.0% | |
| CTCATGGGGATTAGAATATC+TGG | - | chr4_1:70857544-70857563 | None:intergenic | 40.0% | |
| TATTCTAATCCCCATGAGAG+TGG | + | chr4_1:70857546-70857565 | Msa0569060:CDS | 40.0% | |
| ATTCTAATCCCCATGAGAGT+GGG | + | chr4_1:70857547-70857566 | Msa0569060:CDS | 40.0% | |
| AGAATAATCCCCACTCTCAT+GGG | - | chr4_1:70857559-70857578 | None:intergenic | 40.0% | |
| GTGCATCATGACAATTCTGA+TGG | + | chr4_1:70857657-70857676 | Msa0569060:CDS | 40.0% | |
| TTTCGGCAGATGAATCATCT+AGG | + | chr4_1:70857691-70857710 | Msa0569060:CDS | 40.0% | |
| TTCGGCAGATGAATCATCTA+GGG | + | chr4_1:70857692-70857711 | Msa0569060:CDS | 40.0% | |
| CAGATGAATCATCTAGGGAA+AGG | + | chr4_1:70857697-70857716 | Msa0569060:CDS | 40.0% | |
| GGGAAAGGGAAATTGATAGA+AGG | + | chr4_1:70857712-70857731 | Msa0569060:CDS | 40.0% | |
| CATAGAGCAATCATTCAAGC+AGG | + | chr4_1:70857737-70857756 | Msa0569060:CDS | 40.0% | |
| ! | TGATGTGGTTTGGATAATGC+TGG | - | chr4_1:70857767-70857786 | None:intergenic | 40.0% |
| CATTTACCAGCCCTAGATTA+AGG | + | chr4_1:70857865-70857884 | Msa0569060:CDS | 40.0% | |
| GACCTATCATCCCTTAATCT+AGG | - | chr4_1:70857879-70857898 | None:intergenic | 40.0% | |
| GAGTAATCAAGGTGAAGATC+AGG | + | chr4_1:70857902-70857921 | Msa0569060:CDS | 40.0% | |
| ! | TCATCTCTTAGCCTTCCATT+AGG | - | chr4_1:70857963-70857982 | None:intergenic | 40.0% |
| AGGCTAAGAGATGATAGATG+TGG | + | chr4_1:70857969-70857988 | Msa0569060:CDS | 40.0% | |
| GATGATAGATGTGGTTCAGA+TGG | + | chr4_1:70857978-70857997 | Msa0569060:CDS | 40.0% | |
| TGGCCGATGTAGATAAAGTT+TGG | + | chr4_1:70858006-70858025 | Msa0569060:CDS | 40.0% | |
| GGCCGATGTAGATAAAGTTT+GGG | + | chr4_1:70858007-70858026 | Msa0569060:CDS | 40.0% | |
| GCAACTAAATCAGTCTGCAT+TGG | - | chr4_1:70858038-70858057 | None:intergenic | 40.0% | |
| ! | ACTGATTTAGTTGCTGTCTC+CGG | + | chr4_1:70858044-70858063 | Msa0569060:CDS | 40.0% |
| CTCAACCAAATTTACTGTGC+CGG | - | chr4_1:70858066-70858085 | None:intergenic | 40.0% | |
| TTCTGTTCCTGTCTAAGCTA+TGG | - | chr4_1:70858160-70858179 | None:intergenic | 40.0% | |
| ATAAGAAGGAAGCCAACTGT+AGG | + | chr4_1:70858207-70858226 | Msa0569060:CDS | 40.0% | |
| ATTCTCATTTCCCAGTCAGT+AGG | + | chr4_1:70858254-70858273 | Msa0569060:CDS | 40.0% | |
| ATGAACAGATGTCTCCTGAT+TGG | + | chr4_1:70858297-70858316 | Msa0569060:CDS | 40.0% | |
| AAAACCATCTCATGTGCAAG+TGG | + | chr4_1:70858429-70858448 | Msa0569060:intron | 40.0% | |
| AAACCATCTCATGTGCAAGT+GGG | + | chr4_1:70858430-70858449 | Msa0569060:intron | 40.0% | |
| TAGTCCTTGTCCTGTCAAAA+GGG | - | chr4_1:70858534-70858553 | None:intergenic | 40.0% | |
| TTAGTCCTTGTCCTGTCAAA+AGG | - | chr4_1:70858535-70858554 | None:intergenic | 40.0% | |
| ATAACTGCTTCCCATTTGGT+TGG | + | chr4_1:70858572-70858591 | Msa0569060:CDS | 40.0% | |
| CTTGACTTTGTCCAACCAAA+TGG | - | chr4_1:70858586-70858605 | None:intergenic | 40.0% | |
| TCAATAATTCTTGCTCCTGG+GGG | - | chr4_1:70858626-70858645 | None:intergenic | 40.0% | |
| CCTTCAATAATTCTTGCTCC+TGG | - | chr4_1:70858629-70858648 | None:intergenic | 40.0% | |
| CCAGGAGCAAGAATTATTGA+AGG | + | chr4_1:70858626-70858645 | Msa0569060:CDS | 40.0% | |
| CTCTTCGGAAGCAAAATTGA+AGG | + | chr4_1:70858881-70858900 | Msa0569060:CDS | 40.0% | |
| TTCAATCCAATAGCAGGATC+TGG | - | chr4_1:70858941-70858960 | None:intergenic | 40.0% | |
| TACTAGGAGAAAAGGTTGGA+GGG | - | chr4_1:70859021-70859040 | None:intergenic | 40.0% | |
| ATACTAGGAGAAAAGGTTGG+AGG | - | chr4_1:70859022-70859041 | None:intergenic | 40.0% | |
| CCTAGGTTAGATAATAGTGG+TGG | - | chr4_1:70859073-70859092 | None:intergenic | 40.0% | |
| CCACCACTATTATCTAACCT+AGG | + | chr4_1:70859070-70859089 | Msa0569060:CDS | 40.0% | |
| !! | TTTGTTTTCTTGGCCTCATC+AGG | - | chr4_1:70859226-70859245 | None:intergenic | 40.0% |
| TGATGAGGCCAAGAAAACAA+AGG | + | chr4_1:70859225-70859244 | Msa0569060:CDS | 40.0% | |
| AAGAAAACAAAGGACGCGAA+GGG | + | chr4_1:70859235-70859254 | Msa0569060:CDS | 40.0% | |
| !! | AGGAGATTCTGAAACCAACA+TGG | + | chr4_1:70859296-70859315 | Msa0569060:CDS | 40.0% |
| CTGAAACCAACATGGAAAGA+TGG | + | chr4_1:70859304-70859323 | Msa0569060:CDS | 40.0% | |
| AAGTAACTGGTACAGTACAG+CGG | + | chr4_1:70859377-70859396 | Msa0569060:CDS | 40.0% | |
| ! | TCAATTTTCTCTCGTGTCTG+AGG | - | chr4_1:70859412-70859431 | None:intergenic | 40.0% |
| AAACTTATACAGGTCAGTGG+TGG | + | chr4_1:70859466-70859485 | Msa0569060:intron | 40.0% | |
| ATCTTGTCGCCCATTTAACT+TGG | + | chr4_1:70859529-70859548 | Msa0569060:intron | 40.0% | |
| ATATACATCGATCTCCCATG+GGG | + | chr4_1:70859732-70859751 | Msa0569060:intron | 40.0% | |
| ! | TAGAGTGGTTGGTTCATACA+AGG | + | chr4_1:70859889-70859908 | Msa0569060:intron | 40.0% |
| ! | AGAGTGGTTGGTTCATACAA+GGG | + | chr4_1:70859890-70859909 | Msa0569060:intron | 40.0% |
| !! | AAGGGGAGTGATTTTAATGG+TGG | + | chr4_1:70859908-70859927 | Msa0569060:intron | 40.0% |
| !! | ATTTTAATGGTGGAAAGGGG+AGG | + | chr4_1:70859918-70859937 | Msa0569060:intron | 40.0% |
| !! | TTTTAATGGTGGAAAGGGGA+GGG | + | chr4_1:70859919-70859938 | Msa0569060:intron | 40.0% |
| AGAGGAGGAATTAAACTGTC+CGG | + | chr4_1:70859956-70859975 | Msa0569060:intron | 40.0% | |
| ATTTGGTTGAGAGGAAAGGA+TGG | - | chr4_1:70860036-70860055 | None:intergenic | 40.0% | |
| CTCTATTTGGTTGAGAGGAA+AGG | - | chr4_1:70860040-70860059 | None:intergenic | 40.0% | |
| TAAGGCTCTATTTGGTTGAG+AGG | - | chr4_1:70860045-70860064 | None:intergenic | 40.0% | |
| TTACACCATCCTCAATTGCT+TGG | - | chr4_1:70860075-70860094 | None:intergenic | 40.0% | |
| !!! | GTCCTTGTTTTCATAGGGTA+AGG | + | chr4_1:70860325-70860344 | Msa0569060:intron | 40.0% |
| AAGGTTGTTGCCTTGTCATT+TGG | + | chr4_1:70860344-70860363 | Msa0569060:intron | 40.0% | |
| CTCTTTGTCACCAAATGACA+AGG | - | chr4_1:70860357-70860376 | None:intergenic | 40.0% | |
| AATGCAGCAACACAAGAGAT+GGG | - | chr4_1:70860521-70860540 | None:intergenic | 40.0% | |
| GTATGTGGAAAAGGTTCAGA+AGG | + | chr4_1:70860689-70860708 | Msa0569060:CDS | 40.0% | |
| TTCCCTCAATTGCATCAAAC+AGG | - | chr4_1:70861014-70861033 | None:intergenic | 40.0% | |
| TAGCAGCAGAGTGAAGTTTG+CGG | - | chr4_1:70852541-70852560 | None:intergenic | 45.0% | |
| TTTCCGTGCATAGAAGACGA+TGG | - | chr4_1:70852615-70852634 | None:intergenic | 45.0% | |
| GTAGAACTTCGGAATGGAGA+AGG | - | chr4_1:70852649-70852668 | None:intergenic | 45.0% | |
| TACTTGGAGCCCGATAATGT+TGG | - | chr4_1:70852880-70852899 | None:intergenic | 45.0% | |
| AACATCCCTTGCTTGACCAT+AGG | + | chr4_1:70853100-70853119 | Msa0569060:intron | 45.0% | |
| GGCATCAAAGCTATCCAAGT+GGG | - | chr4_1:70853502-70853521 | None:intergenic | 45.0% | |
| GATACATCAGCCAGTAGAGT+TGG | + | chr4_1:70853527-70853546 | Msa0569060:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4_1:70853821-70853840 | None:intergenic | 45.0% |
| GAGTTAGCAGAATAAACCCC+TGG | + | chr4_1:70853864-70853883 | Msa0569060:intron | 45.0% | |
| TCCAGTTCTTGAACAAGCCA+GGG | - | chr4_1:70853884-70853903 | None:intergenic | 45.0% | |
| TTCCAGTTCTTGAACAAGCC+AGG | - | chr4_1:70853885-70853904 | None:intergenic | 45.0% | |
| CACTCATTCTTGATGCGCAT+TGG | - | chr4_1:70853937-70853956 | None:intergenic | 45.0% | |
| GCTTTGATCTGTCTTGTGAG+TGG | + | chr4_1:70853987-70854006 | Msa0569060:intron | 45.0% | |
| CAGAGGCTGGTAATTAGCTA+AGG | + | chr4_1:70854395-70854414 | Msa0569060:intron | 45.0% | |
| TGGCAGAAACTCGAATTAGG+TGG | + | chr4_1:70855183-70855202 | Msa0569060:intron | 45.0% | |
| !! | TACTAAGTGGGTTGGCTACA+TGG | - | chr4_1:70855397-70855416 | None:intergenic | 45.0% |
| ATGTAGCCAACCCACTTAGT+AGG | + | chr4_1:70855396-70855415 | Msa0569060:intron | 45.0% | |
| ! | CCAGGCTTTATCCTACTAAG+TGG | - | chr4_1:70855410-70855429 | None:intergenic | 45.0% |
| CCACTTAGTAGGATAAAGCC+TGG | + | chr4_1:70855407-70855426 | Msa0569060:intron | 45.0% | |
| GAGAGGAGGAGATAGAAAGT+AGG | + | chr4_1:70855454-70855473 | Msa0569060:intron | 45.0% | |
| TGTGAATCAAGCTGACCATG+AGG | - | chr4_1:70855561-70855580 | None:intergenic | 45.0% | |
| ATAGAACATGAGGGAGGATC+AGG | - | chr4_1:70855764-70855783 | None:intergenic | 45.0% | |
| ! | GTGCTTGAAGCATCAGAGTT+TGG | + | chr4_1:70855862-70855881 | Msa0569060:intron | 45.0% |
| ! | TTGAAGCATCAGAGTTTGGG+TGG | + | chr4_1:70855866-70855885 | Msa0569060:intron | 45.0% |
| AGTGAAGAAGCTTAAGGCTC+TGG | + | chr4_1:70855959-70855978 | Msa0569060:five_prime_UTR | 45.0% | |
| GTGAAGAAGCTTAAGGCTCT+GGG | + | chr4_1:70855960-70855979 | Msa0569060:five_prime_UTR | 45.0% | |
| TGAAGAAGCTTAAGGCTCTG+GGG | + | chr4_1:70855961-70855980 | Msa0569060:five_prime_UTR | 45.0% | |
| TTACTCTCGGGTGGAAATTC+AGG | - | chr4_1:70856044-70856063 | None:intergenic | 45.0% | |
| TGAATTTCCACCCGAGAGTA+AGG | + | chr4_1:70856043-70856062 | Msa0569060:intron | 45.0% | |
| AACAAACAGGCCTTACTCTC+GGG | - | chr4_1:70856056-70856075 | None:intergenic | 45.0% | |
| CACCATAAGCAATTGCAGTC+TGG | + | chr4_1:70856254-70856273 | Msa0569060:intron | 45.0% | |
| ACCCAGACTGCAATTGCTTA+TGG | - | chr4_1:70856259-70856278 | None:intergenic | 45.0% | |
| ! | TTCACGCAAGGAGCCTTTTT+CGG | + | chr4_1:70856358-70856377 | Msa0569060:CDS | 45.0% |
| GGGAGTCAGAGGTTCAAATA+AGG | + | chr4_1:70856379-70856398 | Msa0569060:CDS | 45.0% | |
| ! | CGACGAAGACTACCAAGTTT+TGG | + | chr4_1:70856403-70856422 | Msa0569060:CDS | 45.0% |
| TTGTTCCATTCCTCAAACCC+TGG | - | chr4_1:70856479-70856498 | None:intergenic | 45.0% | |
| GGGTCGGTGCAGATATTAAT+GGG | - | chr4_1:70856558-70856577 | None:intergenic | 45.0% | |
| AGGGTCGGTGCAGATATTAA+TGG | - | chr4_1:70856559-70856578 | None:intergenic | 45.0% | |
| GCTATAGGACGTTGCATTGA+TGG | - | chr4_1:70856968-70856987 | None:intergenic | 45.0% | |
| TCCCGTGTATTGTGTCTATC+TGG | + | chr4_1:70857082-70857101 | Msa0569060:intron | 45.0% | |
| CCCAGATAGACACAATACAC+GGG | - | chr4_1:70857086-70857105 | None:intergenic | 45.0% | |
| CCCGTGTATTGTGTCTATCT+GGG | + | chr4_1:70857083-70857102 | Msa0569060:intron | 45.0% | |
| CTTTGGATATTGCCAGGTCT+AGG | + | chr4_1:70857316-70857335 | Msa0569060:intron | 45.0% | |
| TCGATGATAGGAACAGAACG+AGG | + | chr4_1:70857385-70857404 | Msa0569060:CDS | 45.0% | |
| CGATGATAGGAACAGAACGA+GGG | + | chr4_1:70857386-70857405 | Msa0569060:CDS | 45.0% | |
| GAAAGTAAACACAGGCCAGA+TGG | + | chr4_1:70857516-70857535 | Msa0569060:CDS | 45.0% | |
| TTCTAATCCCCATGAGAGTG+GGG | + | chr4_1:70857548-70857567 | Msa0569060:CDS | 45.0% | |
| GAATAATCCCCACTCTCATG+GGG | - | chr4_1:70857558-70857577 | None:intergenic | 45.0% | |
| GAGAATAATCCCCACTCTCA+TGG | - | chr4_1:70857560-70857579 | None:intergenic | 45.0% | |
| ! | TGCAAAGGGAAGGTGTAGAA+TGG | + | chr4_1:70857617-70857636 | Msa0569060:CDS | 45.0% |
| ! | GCAAAGGGAAGGTGTAGAAT+GGG | + | chr4_1:70857618-70857637 | Msa0569060:CDS | 45.0% |
| ! | GGAGTGTTACTGATGTGGTT+TGG | - | chr4_1:70857777-70857796 | None:intergenic | 45.0% |
| !! | TGCAAGGAGTGTTACTGATG+TGG | - | chr4_1:70857782-70857801 | None:intergenic | 45.0% |
| !! | GCTTTTGGGAATTGTCGGAA+TGG | + | chr4_1:70857810-70857829 | Msa0569060:CDS | 45.0% |
| ! | ATCATCCCTTAATCTAGGGC+TGG | - | chr4_1:70857874-70857893 | None:intergenic | 45.0% |
| GCCCTAGATTAAGGGATGAT+AGG | + | chr4_1:70857874-70857893 | Msa0569060:CDS | 45.0% | |
| GATTAAGGGATGATAGGTCG+AGG | + | chr4_1:70857880-70857899 | Msa0569060:CDS | 45.0% | |
| GATAGGTCGAGGAGTAATCA+AGG | + | chr4_1:70857891-70857910 | Msa0569060:CDS | 45.0% | |
| TCAAGGTGAAGATCAGGTGT+TGG | + | chr4_1:70857908-70857927 | Msa0569060:CDS | 45.0% | |
| ! | GCAACTGGATCGCTCAATTT+TGG | - | chr4_1:70857939-70857958 | None:intergenic | 45.0% |
| ATCCAGTTGCTCCTAATGGA+AGG | + | chr4_1:70857949-70857968 | Msa0569060:CDS | 45.0% | |
| ATGTGGTTCAGATGGCAGAA+TGG | + | chr4_1:70857986-70858005 | Msa0569060:CDS | 45.0% | |
| TGTCTCCGGCACAGTAAATT+TGG | + | chr4_1:70858058-70858077 | Msa0569060:CDS | 45.0% | |
| CGGCACAGTAAATTTGGTTG+AGG | + | chr4_1:70858064-70858083 | Msa0569060:CDS | 45.0% | |
| AAGCCATGAATCCAGGTTCT+GGG | - | chr4_1:70858115-70858134 | None:intergenic | 45.0% | |
| TTGGCCAATGAACGATGGAT+CGG | + | chr4_1:70858133-70858152 | Msa0569060:CDS | 45.0% | |
| ! | ATTTTCTGCCGTCCTACAGT+TGG | - | chr4_1:70858222-70858241 | None:intergenic | 45.0% |
| CTCGCACCATAATTCCAATC+AGG | - | chr4_1:70858314-70858333 | None:intergenic | 45.0% | |
| TTTCCCACTTGCACATGAGA+TGG | - | chr4_1:70858436-70858455 | None:intergenic | 45.0% | |
| ATGTGCAAGTGGGAAAACAG+AGG | + | chr4_1:70858440-70858459 | Msa0569060:intron | 45.0% | |
| ! | TCTACCCTTTTGACAGGACA+AGG | + | chr4_1:70858527-70858546 | Msa0569060:intron | 45.0% |
| ! | AGCCTATCACAAATCGGTTC+TGG | + | chr4_1:70858713-70858732 | Msa0569060:CDS | 45.0% |
| !! | GTCCAGAACCGATTTGTGAT+AGG | - | chr4_1:70858718-70858737 | None:intergenic | 45.0% |
| GGACATACTCCAACTCAGAA+CGG | + | chr4_1:70858734-70858753 | Msa0569060:CDS | 45.0% | |
| ! | TCTAAAGCCCTGTGATGCAA+AGG | + | chr4_1:70858853-70858872 | Msa0569060:CDS | 45.0% |
| AGAGTAGCCTTTGCATCACA+GGG | - | chr4_1:70858863-70858882 | None:intergenic | 45.0% | |
| GATGCAAAGGCTACTCTCTT+CGG | + | chr4_1:70858866-70858885 | Msa0569060:CDS | 45.0% | |
| ATCAAGCCAGATCCTGCTAT+TGG | + | chr4_1:70858932-70858951 | Msa0569060:CDS | 45.0% | |
| GGCTCCATACTGTCAAACAT+TGG | - | chr4_1:70858974-70858993 | None:intergenic | 45.0% | |
| GAATAGTCCTATGGGAGACA+TGG | + | chr4_1:70859186-70859205 | Msa0569060:CDS | 45.0% | |
| ! | TTTTGGTCCATGTCTCCCAT+AGG | - | chr4_1:70859196-70859215 | None:intergenic | 45.0% |
| GGAGACATGGACCAAAATGA+TGG | + | chr4_1:70859199-70859218 | Msa0569060:CDS | 45.0% | |
| ! | CCTCATCAGGTCCATCATTT+TGG | - | chr4_1:70859213-70859232 | None:intergenic | 45.0% |
| !! | CCAAAATGATGGACCTGATG+AGG | + | chr4_1:70859210-70859229 | Msa0569060:CDS | 45.0% |
| !!! | CTTCGCGTCCTTTGTTTTCT+TGG | - | chr4_1:70859236-70859255 | None:intergenic | 45.0% |
| CAAGAAAACAAAGGACGCGA+AGG | + | chr4_1:70859234-70859253 | Msa0569060:CDS | 45.0% | |
| AGAAAACAAAGGACGCGAAG+GGG | + | chr4_1:70859236-70859255 | Msa0569060:CDS | 45.0% | |
| AGTAACTGGTACAGTACAGC+GGG | + | chr4_1:70859378-70859397 | Msa0569060:CDS | 45.0% | |
| ! | GAGTGGTTGGTTCATACAAG+GGG | + | chr4_1:70859891-70859910 | Msa0569060:intron | 45.0% |
| GAGGAGGAATTAAACTGTCC+GGG | + | chr4_1:70859957-70859976 | Msa0569060:intron | 45.0% | |
| GAATGCAGCAACACAAGAGA+TGG | - | chr4_1:70860522-70860541 | None:intergenic | 45.0% | |
| ! | TCTTTTTGTGCAGGCGTATG+TGG | + | chr4_1:70860674-70860693 | Msa0569060:intron | 45.0% |
| GTCATCAATCAAAGCTGCGG+TGG | - | chr4_1:70852514-70852533 | None:intergenic | 50.0% | |
| CGGCATCAAAGCTATCCAAG+TGG | - | chr4_1:70853503-70853522 | None:intergenic | 50.0% | |
| ! | TACTGGCTGATGTATCGGCA+CGG | - | chr4_1:70853523-70853542 | None:intergenic | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr4_1:70853817-70853836 | None:intergenic | 50.0% | |
| CCAGTTCTTGAACAAGCCAG+GGG | - | chr4_1:70853883-70853902 | None:intergenic | 50.0% | |
| CAGTCTGGGTGTTCCTTTAC+AGG | + | chr4_1:70856269-70856288 | Msa0569060:intron | 50.0% | |
| ! | TCACGCAAGGAGCCTTTTTC+GGG | + | chr4_1:70856359-70856378 | Msa0569060:CDS | 50.0% |
| GAACCTCTGACTCCCGAAAA+AGG | - | chr4_1:70856374-70856393 | None:intergenic | 50.0% | |
| !! | GAAAGTGTCTCCAGGGTTTG+AGG | + | chr4_1:70856466-70856485 | Msa0569060:CDS | 50.0% |
| TGTCTCCAGGGTTTGAGGAA+TGG | + | chr4_1:70856471-70856490 | Msa0569060:CDS | 50.0% | |
| AGACACAATACACGGGAGTG+TGG | - | chr4_1:70857079-70857098 | None:intergenic | 50.0% | |
| TTGCCAGGTCTAGGAGAAGT+AGG | + | chr4_1:70857325-70857344 | Msa0569060:intron | 50.0% | |
| TAAAACCATGTGGAGGGCTC+CGG | - | chr4_1:70857353-70857372 | None:intergenic | 50.0% | |
| GATAGGAACAGAACGAGGGA+TGG | + | chr4_1:70857390-70857409 | Msa0569060:CDS | 50.0% | |
| AGCGATCCAGTTGCTCCTAA+TGG | + | chr4_1:70857945-70857964 | Msa0569060:CDS | 50.0% | |
| AGCCTTCCATTAGGAGCAAC+TGG | - | chr4_1:70857954-70857973 | None:intergenic | 50.0% | |
| AGCCATGAATCCAGGTTCTG+GGG | - | chr4_1:70858114-70858133 | None:intergenic | 50.0% | |
| CAAGCCATGAATCCAGGTTC+TGG | - | chr4_1:70858116-70858135 | None:intergenic | 50.0% | |
| CAGAACCTGGATTCATGGCT+TGG | + | chr4_1:70858114-70858133 | Msa0569060:CDS | 50.0% | |
| ATTGGCCAAGCCATGAATCC+AGG | - | chr4_1:70858122-70858141 | None:intergenic | 50.0% | |
| ! | ATGGCTTGGCCAATGAACGA+TGG | + | chr4_1:70858128-70858147 | Msa0569060:CDS | 50.0% |
| TGGCCAATGAACGATGGATC+GGG | + | chr4_1:70858134-70858153 | Msa0569060:CDS | 50.0% | |
| GAAGGAAGCCAACTGTAGGA+CGG | + | chr4_1:70858211-70858230 | Msa0569060:CDS | 50.0% | |
| CTCATTTCCCAGTCAGTAGG+TGG | + | chr4_1:70858257-70858276 | Msa0569060:CDS | 50.0% | |
| ATTTCCCAGTCAGTAGGTGG+AGG | + | chr4_1:70858260-70858279 | Msa0569060:CDS | 50.0% | |
| GGAGACATCTGTTCATCACC+AGG | - | chr4_1:70858293-70858312 | None:intergenic | 50.0% | |
| AGTAAGCAGCAAGTTGCTCC+AGG | + | chr4_1:70858368-70858387 | Msa0569060:CDS | 50.0% | |
| !! | TTGCTGACTCCGTTCTGAGT+TGG | - | chr4_1:70858746-70858765 | None:intergenic | 50.0% |
| GAGAGTAGCCTTTGCATCAC+AGG | - | chr4_1:70858864-70858883 | None:intergenic | 50.0% | |
| ! | CTGGGGGGCATAATTTGATG+TGG | + | chr4_1:70859611-70859630 | Msa0569060:intron | 50.0% |
| AGGGAGGAAGGGGAATAAAG+AGG | + | chr4_1:70859938-70859957 | Msa0569060:intron | 50.0% | |
| GAGGAAGGGGAATAAAGAGG+AGG | + | chr4_1:70859941-70859960 | Msa0569060:intron | 50.0% | |
| CAGCAACACAAGAGATGGGT+AGG | - | chr4_1:70860517-70860536 | None:intergenic | 50.0% | |
| TGTGCAGGCGTATGTGGAAA+AGG | + | chr4_1:70860680-70860699 | Msa0569060:intron | 50.0% | |
| ATCAAAGCTGCGGTGGAGTG+CGG | - | chr4_1:70852507-70852526 | None:intergenic | 55.0% | |
| !! | CGATGGACTAGTGCCCTGTT+TGG | + | chr4_1:70853138-70853157 | Msa0569060:intron | 55.0% |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr4_1:70853808-70853827 | Msa0569060:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr4_1:70853809-70853828 | Msa0569060:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr4_1:70853815-70853834 | Msa0569060:intron | 55.0% | |
| !! | CCCCTGGCTTGTTCAAGAAC+TGG | + | chr4_1:70853880-70853899 | Msa0569060:intron | 55.0% |
| !! | GCTCTGGGGAGTTAGATGAG+CGG | + | chr4_1:70855975-70855994 | Msa0569060:exon | 55.0% |
| AAACAGGCCTTACTCTCGGG+TGG | - | chr4_1:70856053-70856072 | None:intergenic | 55.0% | |
| !!! | GAGCCTTTTTCGGGAGTCAG+AGG | + | chr4_1:70856368-70856387 | Msa0569060:CDS | 55.0% |
| ! | ATCTGCACCGACCCTGATGT+TGG | + | chr4_1:70856564-70856583 | Msa0569060:intron | 55.0% |
| GCTCCTACTTCTCCTAGACC+TGG | - | chr4_1:70857331-70857350 | None:intergenic | 55.0% | |
| GGTCTAGGAGAAGTAGGAGC+CGG | + | chr4_1:70857331-70857350 | Msa0569060:intron | 55.0% | |
| GCTGTTGGGAACTGCAGAAG+AGG | + | chr4_1:70857441-70857460 | Msa0569060:CDS | 55.0% | |
| TGGCCCGATCCATCGTTCAT+TGG | - | chr4_1:70858140-70858159 | None:intergenic | 55.0% | |
| GATCGGGCCATAGCTTAGAC+AGG | + | chr4_1:70858150-70858169 | Msa0569060:CDS | 55.0% | |
| ! | CATGCCTCCACCTACTGACT+GGG | - | chr4_1:70858267-70858286 | None:intergenic | 55.0% |
| ACATGCCTCCACCTACTGAC+TGG | - | chr4_1:70858268-70858287 | None:intergenic | 55.0% | |
| ! | AGTCAGTAGGTGGAGGCATG+TGG | + | chr4_1:70858267-70858286 | Msa0569060:CDS | 55.0% |
| ACAGCTTCCATTGTTCCCCC+AGG | + | chr4_1:70858608-70858627 | Msa0569060:CDS | 55.0% | |
| TCTTGCTCCTGGGGGAACAA+TGG | - | chr4_1:70858618-70858637 | None:intergenic | 55.0% | |
| TATGTGCGAGAGAGGCTGAG+AGG | - | chr4_1:70858793-70858812 | None:intergenic | 55.0% | |
| GCCTCTCTCGCACATATCCT+CGG | + | chr4_1:70858797-70858816 | Msa0569060:CDS | 55.0% | |
| TCCGAGGATATGTGCGAGAG+AGG | - | chr4_1:70858801-70858820 | None:intergenic | 55.0% | |
| CTCGCACATATCCTCGGAAC+TGG | + | chr4_1:70858803-70858822 | Msa0569060:CDS | 55.0% | |
| ! | TAATGGTGGAAAGGGGAGGG+AGG | + | chr4_1:70859922-70859941 | Msa0569060:intron | 55.0% |
| TCAAAGCTGCGGTGGAGTGC+GGG | - | chr4_1:70852506-70852525 | None:intergenic | 60.0% | |
| CTGGGGAGTTAGATGAGCGG+AGG | + | chr4_1:70855978-70855997 | Msa0569060:exon | 60.0% | |
| ATCATAGGCGCCCCAGAACC+TGG | + | chr4_1:70858101-70858120 | Msa0569060:CDS | 60.0% | |
| CGCCCCAGAACCTGGATTCA+TGG | + | chr4_1:70858109-70858128 | Msa0569060:CDS | 60.0% | |
| GTGGAAAGGGGAGGGAGGAA+GGG | + | chr4_1:70859927-70859946 | Msa0569060:intron | 60.0% | |
| TGGAAAGGGGAGGGAGGAAG+GGG | + | chr4_1:70859928-70859947 | Msa0569060:intron | 60.0% | |
| ! | GTAGGTGGAGGCATGTGGCC+TGG | + | chr4_1:70858272-70858291 | Msa0569060:CDS | 65.0% |
| GGAGCTGCTGACCAGTTCCG+AGG | - | chr4_1:70858817-70858836 | None:intergenic | 65.0% | |
| GGTGGAAAGGGGAGGGAGGA+AGG | + | chr4_1:70859926-70859945 | Msa0569060:intron | 65.0% | |
| TGCGGTGGAGTGCGGGATGC+GGG | - | chr4_1:70852499-70852518 | None:intergenic | 70.0% | |
| CTGCGGTGGAGTGCGGGATG+CGG | - | chr4_1:70852500-70852519 | None:intergenic | 70.0% | |
| AGGAGCCGGAGCCCTCCACA+TGG | + | chr4_1:70857345-70857364 | Msa0569060:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 70852473 | 70861034 | 70852473 | ID=Msa0569060;Name=Msa0569060 |
| chr4_1 | mRNA | 70852473 | 70861034 | 70852473 | ID=Msa0569060-mRNA-1;Parent=Msa0569060;Name=Msa0569060-mRNA-1;_AED=0.13;_eAED=0.13;_QI=270|1|1|1|0.8|0.66|6|318|779 |
| chr4_1 | exon | 70852473 | 70852680 | 70852473 | ID=Msa0569060-mRNA-1:exon:23895;Parent=Msa0569060-mRNA-1 |
| chr4_1 | exon | 70855928 | 70856059 | 70855928 | ID=Msa0569060-mRNA-1:exon:23896;Parent=Msa0569060-mRNA-1 |
| chr4_1 | exon | 70856291 | 70856537 | 70856291 | ID=Msa0569060-mRNA-1:exon:23897;Parent=Msa0569060-mRNA-1 |
| chr4_1 | exon | 70857332 | 70858389 | 70857332 | ID=Msa0569060-mRNA-1:exon:23898;Parent=Msa0569060-mRNA-1 |
| chr4_1 | exon | 70858543 | 70859477 | 70858543 | ID=Msa0569060-mRNA-1:exon:23899;Parent=Msa0569060-mRNA-1 |
| chr4_1 | exon | 70860687 | 70861034 | 70860687 | ID=Msa0569060-mRNA-1:exon:23900;Parent=Msa0569060-mRNA-1 |
| chr4_1 | five_prime_UTR | 70852473 | 70852680 | 70852473 | ID=Msa0569060-mRNA-1:five_prime_utr;Parent=Msa0569060-mRNA-1 |
| chr4_1 | five_prime_UTR | 70855928 | 70855989 | 70855928 | ID=Msa0569060-mRNA-1:five_prime_utr;Parent=Msa0569060-mRNA-1 |
| chr4_1 | CDS | 70855990 | 70856059 | 70855990 | ID=Msa0569060-mRNA-1:cds;Parent=Msa0569060-mRNA-1 |
| chr4_1 | CDS | 70856291 | 70856537 | 70856291 | ID=Msa0569060-mRNA-1:cds;Parent=Msa0569060-mRNA-1 |
| chr4_1 | CDS | 70857332 | 70858389 | 70857332 | ID=Msa0569060-mRNA-1:cds;Parent=Msa0569060-mRNA-1 |
| chr4_1 | CDS | 70858543 | 70859477 | 70858543 | ID=Msa0569060-mRNA-1:cds;Parent=Msa0569060-mRNA-1 |
| chr4_1 | CDS | 70860687 | 70860716 | 70860687 | ID=Msa0569060-mRNA-1:cds;Parent=Msa0569060-mRNA-1 |
| chr4_1 | three_prime_UTR | 70860717 | 70861034 | 70860717 | ID=Msa0569060-mRNA-1:three_prime_utr;Parent=Msa0569060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
