Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574480 | XP_003630858.1 | 98.228 | 395 | 7 | 0 | 1 | 395 | 1 | 395 | 0.0 | 740 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574480 | G7L9Q1 | 98.228 | 395 | 7 | 0 | 1 | 395 | 1 | 395 | 0.0 | 740 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0527980 | Msa0574480 | 0.811845 | 5.711094e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574480 | MtrunA17_Chr8g0391061 | 98.228 | 395 | 7 | 0 | 1 | 395 | 1 | 395 | 0.0 | 740 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574480 | AT1G73840.1 | 48.175 | 411 | 174 | 16 | 1 | 395 | 1 | 388 | 1.04e-79 | 250 |
| Msa0574480 | AT1G73840.2 | 43.143 | 350 | 161 | 15 | 61 | 395 | 1 | 327 | 1.80e-44 | 157 |
Find 144 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGCACTGAAGGCTGATTT+TGG | 0.217216 | 4_1:+78043472 | None:intergenic |
| CCACCGATTGGTGCCAATTT+AGG | 0.222463 | 4_1:-78043126 | Msa0574480:CDS |
| GGAGCTATTGGTTGAACTTT+TGG | 0.239042 | 4_1:+78043624 | None:intergenic |
| ATCTCCCACTCCTTTCAATT+TGG | 0.243860 | 4_1:-78041249 | Msa0574480:three_prime_UTR |
| CCACCTTGCACAGGCAATAT+TGG | 0.272411 | 4_1:+78043546 | None:intergenic |
| AGCATGTTGAAAACCTAAAT+TGG | 0.303611 | 4_1:+78043113 | None:intergenic |
| GGTTTGCACTGAAGGTGGTC+TGG | 0.310505 | 4_1:+78043167 | None:intergenic |
| GGATCTGTTTGGCTTGTTGC+TGG | 0.311501 | 4_1:+78045844 | None:intergenic |
| CTTTGGTTAACATGGGGTTT+TGG | 0.322191 | 4_1:+78045817 | None:intergenic |
| TGGGGAGTCAGATGCCCTTT+AGG | 0.329475 | 4_1:+78043372 | None:intergenic |
| CAGGTTGGAAATATACCATT+TGG | 0.354659 | 4_1:-78041662 | Msa0574480:CDS |
| ATCATCTCAGTCATCTTATC+AGG | 0.369211 | 4_1:-78042903 | Msa0574480:intron |
| AAGTTGATTCTTCGACATTC+CGG | 0.379339 | 4_1:+78045991 | None:intergenic |
| GAGAATCTAGCACAGCATTC+TGG | 0.381170 | 4_1:-78041566 | Msa0574480:CDS |
| GGTCTTTGTGTCGGCTGTAC+TGG | 0.384854 | 4_1:+78043585 | None:intergenic |
| AAATTGATAGAGGGTCTTCT+TGG | 0.393175 | 4_1:-78041604 | Msa0574480:CDS |
| AGCACTTGATTTCTTTGTTC+CGG | 0.406131 | 4_1:+78041321 | None:intergenic |
| TCCTCAGGGACCATCATCTA+TGG | 0.406393 | 4_1:-78041543 | Msa0574480:CDS |
| GTTTGCACTGAAGGTGGTCT+GGG | 0.415268 | 4_1:+78043168 | None:intergenic |
| TTCTTGGATGCCTGGTCCCT+CGG | 0.417764 | 4_1:-78041588 | Msa0574480:CDS |
| AGCACAGCATTCTGGTCCTC+AGG | 0.420622 | 4_1:-78041558 | Msa0574480:CDS |
| AATGCCAACTGCCTCGAGTC+AGG | 0.424620 | 4_1:-78043256 | Msa0574480:CDS |
| AGAGGGTCTTCTTGGATGCC+TGG | 0.426008 | 4_1:-78041596 | Msa0574480:CDS |
| GGAACAGCAGCATATGAAAC+TGG | 0.426563 | 4_1:+78043453 | None:intergenic |
| GGTCTGGGCTGCGGTGGCAA+TGG | 0.431160 | 4_1:+78043183 | None:intergenic |
| AGCAATGCCTTCTCCATGTC+TGG | 0.434431 | 4_1:+78041390 | None:intergenic |
| ATATAAATCTTCAATGAGAT+TGG | 0.437556 | 4_1:+78041026 | None:intergenic |
| AGAAACCTGGAAAAGTGCTT+TGG | 0.437758 | 4_1:+78045800 | None:intergenic |
| TGAGATTGATGACTCGTTGT+AGG | 0.439418 | 4_1:+78043432 | None:intergenic |
| TAACCCTTGACCTTTGTAAG+AGG | 0.444123 | 4_1:+78041053 | None:intergenic |
| TATTTGGCTTACATGAAAGA+TGG | 0.445107 | 4_1:+78043062 | None:intergenic |
| AAATGCCACAACAGCCTAAA+GGG | 0.450959 | 4_1:-78043386 | Msa0574480:CDS |
| GGATGGAAGGTTTGCACTGA+AGG | 0.452928 | 4_1:+78043159 | None:intergenic |
| AACAGATGCTGGAGCTACTT+GGG | 0.459345 | 4_1:+78043353 | None:intergenic |
| AGGTTGGAAATATACCATTT+GGG | 0.465872 | 4_1:-78041661 | Msa0574480:CDS |
| GAACAGATGCTGGAGCTACT+TGG | 0.467900 | 4_1:+78043352 | None:intergenic |
| GAGGCAGTTGGCATTTGAGT+TGG | 0.469452 | 4_1:+78043264 | None:intergenic |
| CGAGGGTTTATCAGCGAACC+TGG | 0.474127 | 4_1:-78046014 | Msa0574480:CDS |
| CATCAACCATTGCAGACTCC+TGG | 0.476133 | 4_1:-78043231 | Msa0574480:CDS |
| CTGGGCTGCGGTGGCAATGG+TGG | 0.483339 | 4_1:+78043186 | None:intergenic |
| AACGAGGTCTTCGCAATGGC+CGG | 0.494684 | 4_1:-78046052 | Msa0574480:exon |
| ACTGAAGGTGGTCTGGGCTG+CGG | 0.496060 | 4_1:+78043174 | None:intergenic |
| CTGTAAAGCTCTACATCCAC+TGG | 0.498184 | 4_1:+78046370 | None:intergenic |
| GTAGTAGTGCCTGCCCTGGT+GGG | 0.503872 | 4_1:+78042936 | None:intergenic |
| CAAATGCCACAACAGCCTAA+AGG | 0.507130 | 4_1:-78043387 | Msa0574480:CDS |
| AATCAGGCACAAATCATGCT+TGG | 0.512351 | 4_1:-78043750 | Msa0574480:intron |
| AATGCAATGCAAATTGATAG+AGG | 0.513025 | 4_1:-78041614 | Msa0574480:CDS |
| GACTGAGATGATTGTTGACT+TGG | 0.515162 | 4_1:+78042914 | None:intergenic |
| TCTGATTTCAGCAGTCAAGC+TGG | 0.516591 | 4_1:-78041638 | Msa0574480:CDS |
| GCTAGATTCTCCGAGGGACC+AGG | 0.516688 | 4_1:+78041578 | None:intergenic |
| ACAGAGGGTGGAGGTATATG+TGG | 0.520018 | 4_1:+78043312 | None:intergenic |
| CGATATAATGTCTCAGATGA+AGG | 0.521213 | 4_1:-78045966 | Msa0574480:intron |
| ATTTGGCTTACATGAAAGAT+GGG | 0.523822 | 4_1:+78043063 | None:intergenic |
| GATGATTGTGGAACAGATGC+TGG | 0.524572 | 4_1:+78043342 | None:intergenic |
| ATTGGAGCAGGCTGAACACT+TGG | 0.524643 | 4_1:+78043564 | None:intergenic |
| AGATGCCCTTTAGGCTGTTG+TGG | 0.524650 | 4_1:+78043381 | None:intergenic |
| GGCATTTGAGTTGGATGAAG+TGG | 0.526366 | 4_1:+78043273 | None:intergenic |
| CCTAAATTGGCACCAATCGG+TGG | 0.528144 | 4_1:+78043126 | None:intergenic |
| AAGAATCGCACGCACGAAGC+GGG | 0.528277 | 4_1:-78046139 | Msa0574480:five_prime_UTR |
| AAACCTAAATTGGCACCAAT+CGG | 0.529814 | 4_1:+78043123 | None:intergenic |
| CTTGGTAGTAGTGCCTGCCC+TGG | 0.530835 | 4_1:+78042932 | None:intergenic |
| TGCACAGGCAATATTGGAGC+AGG | 0.531217 | 4_1:+78043552 | None:intergenic |
| GGTAGTAGTGCCTGCCCTGG+TGG | 0.531403 | 4_1:+78042935 | None:intergenic |
| GTTGGATCTACGTTCCCACC+AGG | 0.534207 | 4_1:-78042950 | Msa0574480:CDS |
| GGTAGGAGATTTATCTGCTC+CGG | 0.535490 | 4_1:+78041345 | None:intergenic |
| ACGACGGACGGCAAAGGCTG+CGG | 0.536576 | 4_1:-78046079 | Msa0574480:five_prime_UTR |
| GAAAAGTGCTTTGGTTAACA+TGG | 0.539131 | 4_1:+78045809 | None:intergenic |
| CTCAAACTCAAATTCCTCCC+AGG | 0.544437 | 4_1:-78043500 | Msa0574480:CDS |
| GGTTTATCAGCGAACCTGGC+CGG | 0.544748 | 4_1:-78046010 | Msa0574480:CDS |
| ATCTACGTTCCCACCAGGGC+AGG | 0.545822 | 4_1:-78042945 | Msa0574480:CDS |
| ACTTCCTCTTACAAAGGTCA+AGG | 0.546616 | 4_1:-78041057 | Msa0574480:three_prime_UTR |
| GATTTCTTTGTTCCGGAGGT+AGG | 0.546980 | 4_1:+78041328 | None:intergenic |
| GCATATGAAACTGGCACTGA+AGG | 0.547468 | 4_1:+78043462 | None:intergenic |
| TCTTGTATGCCACCTTGCAC+AGG | 0.548368 | 4_1:+78043537 | None:intergenic |
| GGAGAAGGCATTGCTTCAGC+AGG | 0.548457 | 4_1:-78041382 | Msa0574480:CDS |
| TTGCAACGAATGTGCAGCTG+TGG | 0.549837 | 4_1:+78043407 | None:intergenic |
| TCTATTATTGATGCTCAAAG+TGG | 0.552685 | 4_1:-78041216 | Msa0574480:three_prime_UTR |
| TACACCAAATTGAAAGGAGT+GGG | 0.555717 | 4_1:+78041245 | None:intergenic |
| AGAATCTACACCAAATTGAA+AGG | 0.558415 | 4_1:+78041239 | None:intergenic |
| GAAGGTGGTCTGGGCTGCGG+TGG | 0.560378 | 4_1:+78043177 | None:intergenic |
| GCAGATAAATCTCCTACCTC+CGG | 0.560675 | 4_1:-78041340 | Msa0574480:CDS |
| AAAAGTGCTTTGGTTAACAT+GGG | 0.566181 | 4_1:+78045810 | None:intergenic |
| ATAATTACCGCAGGAGGCCG+AGG | 0.566844 | 4_1:+78041488 | None:intergenic |
| GCTCCAATATTGCCTGTGCA+AGG | 0.568072 | 4_1:-78043549 | Msa0574480:CDS |
| CTAAATTGGCACCAATCGGT+GGG | 0.568515 | 4_1:+78043127 | None:intergenic |
| CATGCAGTTGACACCAGACA+TGG | 0.573544 | 4_1:-78041403 | Msa0574480:intron |
| GATGAATGAACAGAGGGTGG+AGG | 0.579071 | 4_1:+78043303 | None:intergenic |
| GGTGCAAAACCTCCTAGTGT+TGG | 0.579641 | 4_1:-78042968 | Msa0574480:CDS |
| TGAGCAGAAACCATAGATGA+TGG | 0.580733 | 4_1:+78041533 | None:intergenic |
| TGCGCCTGACTCGAGGCAGT+TGG | 0.581868 | 4_1:+78043252 | None:intergenic |
| GATTCTTCGACATTCCGGCC+AGG | 0.582129 | 4_1:+78045996 | None:intergenic |
| CATGAAAGATGGGCGGAGCA+AGG | 0.582178 | 4_1:+78043073 | None:intergenic |
| GGCACAAATCATGCTTGGAA+TGG | 0.585549 | 4_1:-78043745 | Msa0574480:CDS |
| GTGCTGCTAATCAGCCTCCT+CGG | 0.587990 | 4_1:-78041505 | Msa0574480:CDS |
| TCTATGGTTTCTGCTCAGAT+CGG | 0.590710 | 4_1:-78041527 | Msa0574480:CDS |
| TGGAAGGTTTGCACTGAAGG+TGG | 0.591348 | 4_1:+78043162 | None:intergenic |
| AATCGCACGCACGAAGCGGG+AGG | 0.595099 | 4_1:-78046136 | Msa0574480:five_prime_UTR |
| TGTGGAAGTTGTGATGATTG+TGG | 0.596173 | 4_1:+78043330 | None:intergenic |
| ATCGCACGCACGAAGCGGGA+GGG | 0.599016 | 4_1:-78046135 | Msa0574480:five_prime_UTR |
| GGAAAACAAGTAAGCGGCGA+GGG | 0.599552 | 4_1:-78046031 | Msa0574480:CDS |
| TGAACACTTGGTCTTTGTGT+CGG | 0.602044 | 4_1:+78043576 | None:intergenic |
| AGGTTTACGACGGACGGCAA+AGG | 0.602583 | 4_1:-78046085 | Msa0574480:five_prime_UTR |
| TCAGCCTCCTCGGCCTCCTG+CGG | 0.602819 | 4_1:-78041495 | Msa0574480:intron |
| CTGCTGAAATCAGACCCAAA+TGG | 0.603135 | 4_1:+78041647 | None:intergenic |
| GCACAGCATTCTGGTCCTCA+GGG | 0.603604 | 4_1:-78041557 | Msa0574480:CDS |
| AGAGGCATATGTGAAAATCC+AGG | 0.603771 | 4_1:+78043213 | None:intergenic |
| AAATTGGCACCAATCGGTGG+GGG | 0.604689 | 4_1:+78043129 | None:intergenic |
| TAAGAATCGCACGCACGAAG+CGG | 0.605399 | 4_1:-78046140 | Msa0574480:five_prime_UTR |
| GCAATCAGGTTTACGACGGA+CGG | 0.608212 | 4_1:-78046091 | Msa0574480:five_prime_UTR |
| GGTGGGACTTCCTCTTACAA+AGG | 0.608875 | 4_1:-78041063 | Msa0574480:three_prime_UTR |
| TAAATTGGCACCAATCGGTG+GGG | 0.616828 | 4_1:+78043128 | None:intergenic |
| ATGCAATGCAAATTGATAGA+GGG | 0.619745 | 4_1:-78041613 | Msa0574480:CDS |
| TGGTTGATGCGCCTGACTCG+AGG | 0.620870 | 4_1:+78043245 | None:intergenic |
| CTACACCAAATTGAAAGGAG+TGG | 0.621012 | 4_1:+78041244 | None:intergenic |
| GAAGCGGGAGGGACTGTGAG+AGG | 0.625226 | 4_1:-78046124 | Msa0574480:five_prime_UTR |
| CTTCCTCTTACAAAGGTCAA+GGG | 0.627471 | 4_1:-78041056 | Msa0574480:three_prime_UTR |
| ACAGATGCTGGAGCTACTTG+GGG | 0.629033 | 4_1:+78043354 | None:intergenic |
| TTCACAATAATTACCGCAGG+AGG | 0.629072 | 4_1:+78041482 | None:intergenic |
| ACTTGATTTCTTTGTTCCGG+AGG | 0.637553 | 4_1:+78041324 | None:intergenic |
| GGTGGCAATGGTGGTTGCAG+AGG | 0.638987 | 4_1:+78043195 | None:intergenic |
| CGACAACGAGGTCTTCGCAA+TGG | 0.639266 | 4_1:-78046056 | Msa0574480:exon |
| AAAGTGCTTTGGTTAACATG+GGG | 0.639464 | 4_1:+78045811 | None:intergenic |
| GGTGGCATACAAGATCAAGC+TGG | 0.646043 | 4_1:-78043528 | Msa0574480:CDS |
| AACGTAGATCCAACACTAGG+AGG | 0.646821 | 4_1:+78042959 | None:intergenic |
| TGCAACGAATGTGCAGCTGT+GGG | 0.650445 | 4_1:+78043408 | None:intergenic |
| TGCTGTGCTAGATTCTCCGA+GGG | 0.654352 | 4_1:+78041572 | None:intergenic |
| ATTACCGCAGGAGGCCGAGG+AGG | 0.656048 | 4_1:+78041491 | None:intergenic |
| TGGCTTACATGAAAGATGGG+CGG | 0.666783 | 4_1:+78043066 | None:intergenic |
| GAAGATGAATGAACAGAGGG+TGG | 0.672837 | 4_1:+78043300 | None:intergenic |
| GGGAACGTAGATCCAACACT+AGG | 0.673989 | 4_1:+78042956 | None:intergenic |
| TTGGATCTACGTTCCCACCA+GGG | 0.674955 | 4_1:-78042949 | Msa0574480:CDS |
| ATGGCCGGAAAACAAGTAAG+CGG | 0.675868 | 4_1:-78046037 | Msa0574480:CDS |
| TGTGAAGATGAATGAACAGA+GGG | 0.681536 | 4_1:+78043297 | None:intergenic |
| AATGGTGCAGTCGCAACAAG+CGG | 0.683239 | 4_1:-78043727 | Msa0574480:intron |
| ATCGGCAATCAGGTTTACGA+CGG | 0.687770 | 4_1:-78046095 | Msa0574480:five_prime_UTR |
| CGGAAAACAAGTAAGCGGCG+AGG | 0.688386 | 4_1:-78046032 | Msa0574480:CDS |
| GTTGACACCAGACATGGAGA+AGG | 0.688888 | 4_1:-78041397 | Msa0574480:CDS |
| ATGCTGTGCTAGATTCTCCG+AGG | 0.691552 | 4_1:+78041571 | None:intergenic |
| CCAATATTGCCTGTGCAAGG+TGG | 0.694856 | 4_1:-78043546 | Msa0574480:CDS |
| CAAAGGCTGCGGCGACAACG+AGG | 0.695329 | 4_1:-78046068 | Msa0574480:five_prime_UTR |
| GAAAATCCAGGAGTCTGCAA+TGG | 0.697860 | 4_1:+78043225 | None:intergenic |
| GCAGGTCATGAGTCTCACAC+CGG | 0.699959 | 4_1:-78041364 | Msa0574480:CDS |
| ACCATAGATGATGGTCCCTG+AGG | 0.710726 | 4_1:+78041542 | None:intergenic |
| CTGTGAAGATGAATGAACAG+AGG | 0.739097 | 4_1:+78043296 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCATTAATTTTTTTTGA+AGG | + | chr4_1:78041209-78041228 | None:intergenic | 10.0% |
| !! | AAAAATTTAATATTTCACAA+TGG | - | chr4_1:78042229-78042248 | Msa0574480:intron | 10.0% |
| !!! | TTAATTTCTAGATACAAAAT+CGG | + | chr4_1:78041989-78042008 | None:intergenic | 15.0% |
| !!! | AATATTAAATTTTTCAAGCA+GGG | + | chr4_1:78042223-78042242 | None:intergenic | 15.0% |
| !!! | AAATATTAAATTTTTCAAGC+AGG | + | chr4_1:78042224-78042243 | None:intergenic | 15.0% |
| !!! | AAATATTTTTGTTTTTGCAA+AGG | + | chr4_1:78042921-78042940 | None:intergenic | 15.0% |
| !! | AAATTGTAAACTGAAATATT+TGG | + | chr4_1:78044330-78044349 | None:intergenic | 15.0% |
| !!! | TATTTATTGATGAAATTTTC+AGG | - | chr4_1:78044380-78044399 | Msa0574480:intron | 15.0% |
| !! | TATACAAACAAAATTATCTT+TGG | - | chr4_1:78044732-78044751 | Msa0574480:intron | 15.0% |
| !!! | TTCAATATATATTTTTGACA+TGG | + | chr4_1:78044960-78044979 | None:intergenic | 15.0% |
| !!! | TTCTATTTTGACTTTTATCA+GGG | + | chr4_1:78041062-78041081 | None:intergenic | 20.0% |
| !!! | TTTCTATTTTGACTTTTATC+AGG | + | chr4_1:78041063-78041082 | None:intergenic | 20.0% |
| !! | AATCAATTGTTAAAGTTTAG+AGG | + | chr4_1:78041115-78041134 | None:intergenic | 20.0% |
| !! | GGAAATAAGTGATAAATTTA+AGG | + | chr4_1:78041145-78041164 | None:intergenic | 20.0% |
| !! | TTTGTTAAGAAGTTAAAGAA+CGG | + | chr4_1:78041166-78041185 | None:intergenic | 20.0% |
| !! | CTTGCACAAAATAAAATTTA+GGG | + | chr4_1:78041683-78041702 | None:intergenic | 20.0% |
| !! | TCTTGCACAAAATAAAATTT+AGG | + | chr4_1:78041684-78041703 | None:intergenic | 20.0% |
| !! | ATTTAATATTTCACAATGGA+TGG | - | chr4_1:78042233-78042252 | Msa0574480:intron | 20.0% |
| !! | GCTCATTAATGATAAAAAAT+CGG | + | chr4_1:78042455-78042474 | None:intergenic | 20.0% |
| !!! | TAATGTTTCTATCTATTTCA+CGG | - | chr4_1:78042980-78042999 | Msa0574480:intron | 20.0% |
| !!! | AAGTTAGATTTTACTTTAGA+CGG | - | chr4_1:78043033-78043052 | Msa0574480:intron | 20.0% |
| !!! | AAAATTATCTTTGGTTTACA+TGG | - | chr4_1:78044741-78044760 | Msa0574480:intron | 20.0% |
| !! | ACAAGTAAATCTAAGTAAAA+TGG | - | chr4_1:78045614-78045633 | Msa0574480:intron | 20.0% |
| !! | GAAGAAAAATTTAGATTAGA+TGG | - | chr4_1:78046289-78046308 | Msa0574480:intron | 20.0% |
| !! | AAAAATTTAGATTAGATGGT+GGG | - | chr4_1:78046293-78046312 | Msa0574480:intron | 20.0% |
| !! | ATATAAATCTTCAATGAGAT+TGG | + | chr4_1:78046350-78046369 | None:intergenic | 20.0% |
| !! | AAATCATAACAATTAGCTTG+TGG | - | chr4_1:78041772-78041791 | Msa0574480:intron | 25.0% |
| ! | TGTTAGTAGCAATTAATCTT+AGG | - | chr4_1:78041845-78041864 | Msa0574480:intron | 25.0% |
| !! | TCTGTTTTGTATCTATATGT+CGG | - | chr4_1:78041944-78041963 | Msa0574480:intron | 25.0% |
| ! | CTAGAAATACATAAGAGAAA+CGG | - | chr4_1:78042076-78042095 | Msa0574480:intron | 25.0% |
| ! | AGATTTAGAGATTAATGAGT+TGG | - | chr4_1:78042106-78042125 | Msa0574480:intron | 25.0% |
| !! | TAATGAGTTGGATCTAAATA+TGG | - | chr4_1:78042118-78042137 | Msa0574480:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | - | chr4_1:78042138-78042157 | Msa0574480:intron | 25.0% |
| ! | TTAATGATAAAAAATCGGTC+TGG | + | chr4_1:78042450-78042469 | None:intergenic | 25.0% |
| !!! | TTTTTTATCATTAATGAGCG+AGG | - | chr4_1:78042456-78042475 | Msa0574480:intron | 25.0% |
| ! | GTAGTCTATGTATAACATTT+AGG | - | chr4_1:78042629-78042648 | Msa0574480:intron | 25.0% |
| !!! | TATGTATAACATTTAGGTTG+AGG | - | chr4_1:78042635-78042654 | Msa0574480:intron | 25.0% |
| !!! | ATGTATAACATTTAGGTTGA+GGG | - | chr4_1:78042636-78042655 | Msa0574480:intron | 25.0% |
| ! | TATATTGATGGAAGTTTGAT+TGG | - | chr4_1:78042705-78042724 | Msa0574480:intron | 25.0% |
| ! | ATATTGATGGAAGTTTGATT+GGG | - | chr4_1:78042706-78042725 | Msa0574480:intron | 25.0% |
| !! | TTGTAGATTGTGTTATGTTT+TGG | - | chr4_1:78042738-78042757 | Msa0574480:intron | 25.0% |
| !! | TGTAGATTGTGTTATGTTTT+GGG | - | chr4_1:78042739-78042758 | Msa0574480:intron | 25.0% |
| ! | CTACACATGAAGATTTATTT+AGG | - | chr4_1:78042944-78042963 | Msa0574480:CDS | 25.0% |
| ! | AGATAGAAACATTAGGAAAT+GGG | + | chr4_1:78042974-78042993 | None:intergenic | 25.0% |
| ! | TAGATAGAAACATTAGGAAA+TGG | + | chr4_1:78042975-78042994 | None:intergenic | 25.0% |
| ! | GTGAAATAGATAGAAACATT+AGG | + | chr4_1:78042981-78043000 | None:intergenic | 25.0% |
| ! | AAGTAAAATCTAACTTCAGA+GGG | + | chr4_1:78043029-78043048 | None:intergenic | 25.0% |
| ! | AAAGTAAAATCTAACTTCAG+AGG | + | chr4_1:78043030-78043049 | None:intergenic | 25.0% |
| ! | AAACAGTCTAAAAAAGTGAA+CGG | + | chr4_1:78043482-78043501 | None:intergenic | 25.0% |
| ! | TAGATTTGCATGCTAATAAA+TGG | - | chr4_1:78043713-78043732 | Msa0574480:intron | 25.0% |
| ! | TTTAGACTTGAAAACTATGT+TGG | - | chr4_1:78044515-78044534 | Msa0574480:intron | 25.0% |
| ! | GTGGCATCAAAATATATTAT+TGG | - | chr4_1:78044562-78044581 | Msa0574480:intron | 25.0% |
| ! | CAACTCAAGATAAAAAACTA+TGG | + | chr4_1:78044802-78044821 | None:intergenic | 25.0% |
| !!! | TGTTTGTAGTCTTTAATTTG+GGG | + | chr4_1:78045037-78045056 | None:intergenic | 25.0% |
| !! | CTGTTTGTAGTCTTTAATTT+GGG | + | chr4_1:78045038-78045057 | None:intergenic | 25.0% |
| ! | ATTTCTGTCAAACAAAAAGA+AGG | - | chr4_1:78045291-78045310 | Msa0574480:intron | 25.0% |
| !! | TTTTGTCAATGTGAAGATTA+CGG | - | chr4_1:78045377-78045396 | Msa0574480:intron | 25.0% |
| ! | TAAAATCACCAAAATCAACT+TGG | + | chr4_1:78045580-78045599 | None:intergenic | 25.0% |
| ! | GAAAAATTTAGATTAGATGG+TGG | - | chr4_1:78046292-78046311 | Msa0574480:intron | 25.0% |
| CTGAATAGAGAAAAACGAAA+GGG | + | chr4_1:78041492-78041511 | None:intergenic | 30.0% | |
| TCTGAATAGAGAAAAACGAA+AGG | + | chr4_1:78041493-78041512 | None:intergenic | 30.0% | |
| !! | AAAAGTGCTTTGGTTAACAT+GGG | + | chr4_1:78041566-78041585 | None:intergenic | 30.0% |
| TATGAGCAAGTTTACAAGAA+AGG | + | chr4_1:78041753-78041772 | None:intergenic | 30.0% | |
| !! | ATAACAATTAGCTTGTGGAA+TGG | - | chr4_1:78041777-78041796 | Msa0574480:intron | 30.0% |
| ! | CAACTTTTGCGTGATTTATT+TGG | - | chr4_1:78041811-78041830 | Msa0574480:intron | 30.0% |
| GCAAATCCAAACTATAACAA+CGG | + | chr4_1:78041911-78041930 | None:intergenic | 30.0% | |
| CGTTTCTCTTATGTATTTCT+AGG | + | chr4_1:78042078-78042097 | None:intergenic | 30.0% | |
| !! | GTAAATCCACTAGCTTATTT+TGG | - | chr4_1:78042255-78042274 | Msa0574480:intron | 30.0% |
| !!! | TAGCTTATTTTGGAACCATA+GGG | - | chr4_1:78042265-78042284 | Msa0574480:intron | 30.0% |
| !!! | TTACAGCTTTGGAGTTTTAA+GGG | - | chr4_1:78042308-78042327 | Msa0574480:intron | 30.0% |
| ! | AAGGGATTTTTGTGATTCTT+CGG | - | chr4_1:78042326-78042345 | Msa0574480:intron | 30.0% |
| !! | ATTGTTTCTGTTGTAGGATT+AGG | - | chr4_1:78042408-78042427 | Msa0574480:intron | 30.0% |
| !! | TGTATAACATTTAGGTTGAG+GGG | - | chr4_1:78042637-78042656 | Msa0574480:intron | 30.0% |
| GTAACGAGGTAATATATTGA+TGG | - | chr4_1:78042693-78042712 | Msa0574480:intron | 30.0% | |
| GATAGAAACATTAGGAAATG+GGG | + | chr4_1:78042973-78042992 | None:intergenic | 30.0% | |
| AGTAAAATCTAACTTCAGAG+GGG | + | chr4_1:78043028-78043047 | None:intergenic | 30.0% | |
| GCATACACATGTATAAAGAA+TGG | + | chr4_1:78043103-78043122 | None:intergenic | 30.0% | |
| ! | ACAGCATACAGATTTGAAAT+CGG | + | chr4_1:78043235-78043254 | None:intergenic | 30.0% |
| CCTGATTAGACAAAACAAAA+TGG | + | chr4_1:78043610-78043629 | None:intergenic | 30.0% | |
| !!! | CCATTTTGTTTTGTCTAATC+AGG | - | chr4_1:78043607-78043626 | Msa0574480:CDS | 30.0% |
| AATGACAGCAAAATAAAGAG+AGG | + | chr4_1:78043678-78043697 | None:intergenic | 30.0% | |
| AGCATGTTGAAAACCTAAAT+TGG | + | chr4_1:78044263-78044282 | None:intergenic | 30.0% | |
| !! | AATTTAGGTTTTCAACATGC+TGG | - | chr4_1:78044262-78044281 | Msa0574480:intron | 30.0% |
| ! | ATTTGGCTTACATGAAAGAT+GGG | + | chr4_1:78044313-78044332 | None:intergenic | 30.0% |
| ! | TATTTGGCTTACATGAAAGA+TGG | + | chr4_1:78044314-78044333 | None:intergenic | 30.0% |
| !! | TATTGATGAAATTTTCAGGC+TGG | - | chr4_1:78044384-78044403 | Msa0574480:intron | 30.0% |
| !!! | GAAAGTACCTTTTAGATTCA+CGG | - | chr4_1:78044763-78044782 | Msa0574480:intron | 30.0% |
| TTATTCCGAAAATGCTATAG+TGG | - | chr4_1:78044836-78044855 | Msa0574480:intron | 30.0% | |
| ! | TCATTCCACTATAGCATTTT+CGG | + | chr4_1:78044844-78044863 | None:intergenic | 30.0% |
| ! | ATAGTGGAATGACAGATAAT+TGG | - | chr4_1:78044852-78044871 | Msa0574480:intron | 30.0% |
| GCTGTTTGTAGTCTTTAATT+TGG | + | chr4_1:78045039-78045058 | None:intergenic | 30.0% | |
| GTAGACAGTGGAAAAAAAAA+TGG | - | chr4_1:78045121-78045140 | Msa0574480:intron | 30.0% | |
| !! | TGTGATTGCTTTATTTCTGA+TGG | + | chr4_1:78045250-78045269 | None:intergenic | 30.0% |
| CAAAAAGAAGGTAAATCACA+AGG | - | chr4_1:78045303-78045322 | Msa0574480:intron | 30.0% | |
| TTTGTCAATGTGAAGATTAC+GGG | - | chr4_1:78045378-78045397 | Msa0574480:intron | 30.0% | |
| ! | TATTGTACTGATGATTCTGA+AGG | - | chr4_1:78045415-78045434 | Msa0574480:intron | 30.0% |
| TATTTCGCAATTGAGTTAGT+CGG | - | chr4_1:78045514-78045533 | Msa0574480:intron | 30.0% | |
| TGTTTAATTAACTAGCATGC+TGG | - | chr4_1:78045540-78045559 | Msa0574480:intron | 30.0% | |
| AGGTTGGAAATATACCATTT+GGG | - | chr4_1:78045712-78045731 | Msa0574480:intron | 30.0% | |
| AATGCAATGCAAATTGATAG+AGG | - | chr4_1:78045759-78045778 | Msa0574480:intron | 30.0% | |
| ATGCAATGCAAATTGATAGA+GGG | - | chr4_1:78045760-78045779 | Msa0574480:intron | 30.0% | |
| TAATTCACAATAATTACCGC+AGG | + | chr4_1:78045897-78045916 | None:intergenic | 30.0% | |
| AGAATCTACACCAAATTGAA+AGG | + | chr4_1:78046137-78046156 | None:intergenic | 30.0% | |
| TCTATTATTGATGCTCAAAG+TGG | - | chr4_1:78046157-78046176 | Msa0574480:five_prime_UTR | 30.0% | |
| !! | ATGTGATGAAGTTTTGTAGA+AGG | - | chr4_1:78046184-78046203 | Msa0574480:intron | 30.0% |
| ! | AAGTTGATTCTTCGACATTC+CGG | + | chr4_1:78041385-78041404 | None:intergenic | 35.0% |
| CGATATAATGTCTCAGATGA+AGG | - | chr4_1:78041407-78041426 | Msa0574480:intron | 35.0% | |
| GTTAGCAATAGCAATAAGGA+GGG | + | chr4_1:78041470-78041489 | None:intergenic | 35.0% | |
| ! | AAGGGTTAGCAATAGCAATA+AGG | + | chr4_1:78041474-78041493 | None:intergenic | 35.0% |
| ! | AAAGTGCTTTGGTTAACATG+GGG | + | chr4_1:78041565-78041584 | None:intergenic | 35.0% |
| !! | GAAAAGTGCTTTGGTTAACA+TGG | + | chr4_1:78041567-78041586 | None:intergenic | 35.0% |
| !! | TCTAGTTCTAGAAAGAAACC+TGG | + | chr4_1:78041589-78041608 | None:intergenic | 35.0% |
| TGCAAGAACTCATAACAACA+AGG | - | chr4_1:78041697-78041716 | Msa0574480:intron | 35.0% | |
| GTTGTACCGTTGTTATAGTT+TGG | - | chr4_1:78041902-78041921 | Msa0574480:intron | 35.0% | |
| ACTCTTCTTACTACACACTA+CGG | + | chr4_1:78042012-78042031 | None:intergenic | 35.0% | |
| AGTAAGAAGAGTAGATCAGA+TGG | - | chr4_1:78042020-78042039 | Msa0574480:intron | 35.0% | |
| GAGGATAGTCAAATTACAAG+AGG | - | chr4_1:78042042-78042061 | Msa0574480:intron | 35.0% | |
| ! | TAAGCCTTATCTCACTAAGT+GGG | + | chr4_1:78042188-78042207 | None:intergenic | 35.0% |
| ATGGTTCCAAAATAAGCTAG+TGG | + | chr4_1:78042264-78042283 | None:intergenic | 35.0% | |
| !!! | CTAGCTTATTTTGGAACCAT+AGG | - | chr4_1:78042264-78042283 | Msa0574480:intron | 35.0% |
| !!! | GTTACAGCTTTGGAGTTTTA+AGG | - | chr4_1:78042307-78042326 | Msa0574480:intron | 35.0% |
| ! | ATTTTTGTGATTCTTCGGTG+CGG | - | chr4_1:78042331-78042350 | Msa0574480:intron | 35.0% |
| ATATGATCCAAAGTAAGCAC+AGG | + | chr4_1:78042503-78042522 | None:intergenic | 35.0% | |
| ATATAGATGTTGCTGAGCTA+AGG | - | chr4_1:78042559-78042578 | Msa0574480:intron | 35.0% | |
| !! | CAAAAAGGTGTTGCTAGAAA+GGG | - | chr4_1:78042600-78042619 | Msa0574480:intron | 35.0% |
| !! | AAAAAGGTGTTGCTAGAAAG+GGG | - | chr4_1:78042601-78042620 | Msa0574480:intron | 35.0% |
| TCGTTACTGCATAATATTGC+AGG | + | chr4_1:78042680-78042699 | None:intergenic | 35.0% | |
| TGCAATATTATGCAGTAACG+AGG | - | chr4_1:78042679-78042698 | Msa0574480:intron | 35.0% | |
| !! | AGATTGTGTTATGTTTTGGG+TGG | - | chr4_1:78042742-78042761 | Msa0574480:intron | 35.0% |
| !! | GATTGTGTTATGTTTTGGGT+GGG | - | chr4_1:78042743-78042762 | Msa0574480:intron | 35.0% |
| ! | AAGTCTTATCCCACTAAATG+AGG | + | chr4_1:78042820-78042839 | None:intergenic | 35.0% |
| TCATTTAGTGGGATAAGACT+TGG | - | chr4_1:78042819-78042838 | Msa0574480:intron | 35.0% | |
| AAAGTGTGCAATTCACTTTG+GGG | + | chr4_1:78043174-78043193 | None:intergenic | 35.0% | |
| CAAAGTGTGCAATTCACTTT+GGG | + | chr4_1:78043175-78043194 | None:intergenic | 35.0% | |
| ! | AGGAGTCGTTTGAGTTATAT+AGG | - | chr4_1:78043202-78043221 | Msa0574480:CDS | 35.0% |
| ! | GGAGTCGTTTGAGTTATATA+GGG | - | chr4_1:78043203-78043222 | Msa0574480:CDS | 35.0% |
| AGTGTGCAATTCACTTTAGA+GGG | + | chr4_1:78043338-78043357 | None:intergenic | 35.0% | |
| AAGTGTGCAATTCACTTTAG+AGG | + | chr4_1:78043339-78043358 | None:intergenic | 35.0% | |
| CTAAAGTGAATTGCACACTT+TGG | - | chr4_1:78043339-78043358 | Msa0574480:CDS | 35.0% | |
| !! | GAGTCGTTTGAGTTGTATAA+GGG | - | chr4_1:78043370-78043389 | Msa0574480:CDS | 35.0% |
| AGCATGCAAATCTATACCAA+AGG | + | chr4_1:78043707-78043726 | None:intergenic | 35.0% | |
| GCTAATAAATGGTTGCTTCT+AGG | - | chr4_1:78043724-78043743 | Msa0574480:intron | 35.0% | |
| !!! | TGATTGTTTTGAGGAGCTAT+TGG | + | chr4_1:78043764-78043783 | None:intergenic | 35.0% |
| TGTGAAGATGAATGAACAGA+GGG | + | chr4_1:78044079-78044098 | None:intergenic | 35.0% | |
| AAACCTAAATTGGCACCAAT+CGG | + | chr4_1:78044253-78044272 | None:intergenic | 35.0% | |
| ATCATCTCAGTCATCTTATC+AGG | - | chr4_1:78044470-78044489 | Msa0574480:intron | 35.0% | |
| TGAAAACTATGTTGGTACCA+TGG | - | chr4_1:78044523-78044542 | Msa0574480:intron | 35.0% | |
| GAAAACTATGTTGGTACCAT+GGG | - | chr4_1:78044524-78044543 | Msa0574480:intron | 35.0% | |
| ! | CTTTACACCATCATGAGTTT+TGG | - | chr4_1:78044585-78044604 | Msa0574480:intron | 35.0% |
| CATGAATCCAAAACTCATGA+TGG | + | chr4_1:78044595-78044614 | None:intergenic | 35.0% | |
| TGCTGCAGAAAAAATAGGAT+TGG | + | chr4_1:78044633-78044652 | None:intergenic | 35.0% | |
| GATTCTGCTGCAGAAAAAAT+AGG | + | chr4_1:78044638-78044657 | None:intergenic | 35.0% | |
| ! | TCTGAAGTGTCACTACTATT+AGG | + | chr4_1:78044681-78044700 | None:intergenic | 35.0% |
| CATTTCACCGTGAATCTAAA+AGG | + | chr4_1:78044773-78044792 | None:intergenic | 35.0% | |
| AAACCTTGGTCTCAATTCTT+TGG | + | chr4_1:78045148-78045167 | None:intergenic | 35.0% | |
| TGAGTTGCATAGATCAGAAA+TGG | - | chr4_1:78045341-78045360 | Msa0574480:intron | 35.0% | |
| GAGTTGCATAGATCAGAAAT+GGG | - | chr4_1:78045342-78045361 | Msa0574480:intron | 35.0% | |
| AGTTGCATAGATCAGAAATG+GGG | - | chr4_1:78045343-78045362 | Msa0574480:intron | 35.0% | |
| ATCAGAAATGGGGTAAAGAT+GGG | - | chr4_1:78045353-78045372 | Msa0574480:intron | 35.0% | |
| TCATCAGTACAATATGACAG+CGG | + | chr4_1:78045409-78045428 | None:intergenic | 35.0% | |
| AGGTTGAAACCAATTAACAC+CGG | - | chr4_1:78045435-78045454 | Msa0574480:intron | 35.0% | |
| ! | GTATATTTTTCTCCTCCTTC+CGG | + | chr4_1:78045457-78045476 | None:intergenic | 35.0% |
| !!! | ACCTCAATCCAAGTTGATTT+TGG | - | chr4_1:78045569-78045588 | Msa0574480:intron | 35.0% |
| ACCAAAATCAACTTGGATTG+AGG | + | chr4_1:78045573-78045592 | None:intergenic | 35.0% | |
| ! | CAGGTTGGAAATATACCATT+TGG | - | chr4_1:78045711-78045730 | Msa0574480:intron | 35.0% |
| AAATTGATAGAGGGTCTTCT+TGG | - | chr4_1:78045769-78045788 | Msa0574480:intron | 35.0% | |
| AGCAAGCAGAGAATATCAAT+AGG | + | chr4_1:78045948-78045967 | None:intergenic | 35.0% | |
| AGCACTTGATTTCTTTGTTC+CGG | + | chr4_1:78046055-78046074 | None:intergenic | 35.0% | |
| TACACCAAATTGAAAGGAGT+GGG | + | chr4_1:78046131-78046150 | None:intergenic | 35.0% | |
| GGTTAGCAATAGCAATAAGG+AGG | + | chr4_1:78041471-78041490 | None:intergenic | 40.0% | |
| !! | GTTTTGGATGAGGATCTGTT+TGG | + | chr4_1:78041543-78041562 | None:intergenic | 40.0% |
| !!! | TTAACATGGGGTTTTGGATG+AGG | + | chr4_1:78041553-78041572 | None:intergenic | 40.0% |
| ! | CTTTGGTTAACATGGGGTTT+TGG | + | chr4_1:78041559-78041578 | None:intergenic | 40.0% |
| !! | GTTAACCAAAGCACTTTTCC+AGG | - | chr4_1:78041568-78041587 | Msa0574480:CDS | 40.0% |
| !! | AGAAACCTGGAAAAGTGCTT+TGG | + | chr4_1:78041576-78041595 | None:intergenic | 40.0% |
| GAGCAAGTTTACAAGAAAGG+TGG | + | chr4_1:78041750-78041769 | None:intergenic | 40.0% | |
| AAGAAGAGTAGATCAGATGG+AGG | - | chr4_1:78042023-78042042 | Msa0574480:intron | 40.0% | |
| ! | AAGCCTTATCTCACTAAGTG+GGG | + | chr4_1:78042187-78042206 | None:intergenic | 40.0% |
| ! | CTAAGCCTTATCTCACTAAG+TGG | + | chr4_1:78042189-78042208 | None:intergenic | 40.0% |
| ! | GCTAGGAGTGCAATTTATTG+TGG | - | chr4_1:78042364-78042383 | Msa0574480:intron | 40.0% |
| TGTAGGATTAGGAGACATCT+TGG | - | chr4_1:78042419-78042438 | Msa0574480:intron | 40.0% | |
| TTATCATTAATGAGCGAGGC+AGG | - | chr4_1:78042460-78042479 | Msa0574480:intron | 40.0% | |
| TGCAAGGTATGGTTGCAAAA+AGG | - | chr4_1:78042585-78042604 | Msa0574480:intron | 40.0% | |
| !! | GCAAAAAGGTGTTGCTAGAA+AGG | - | chr4_1:78042599-78042618 | Msa0574480:intron | 40.0% |
| TTGATGGAAGTTTGATTGGG+TGG | - | chr4_1:78042709-78042728 | Msa0574480:intron | 40.0% | |
| ! | GAAGTTTGATTGGGTGGATT+CGG | - | chr4_1:78042715-78042734 | Msa0574480:intron | 40.0% |
| TAAATGAGGTCGGCACAAAT+GGG | + | chr4_1:78042806-78042825 | None:intergenic | 40.0% | |
| CTTATCCCACTAAATGAGGT+CGG | + | chr4_1:78042816-78042835 | None:intergenic | 40.0% | |
| AAGTGTGCAATTCACTTTGG+GGG | + | chr4_1:78043173-78043192 | None:intergenic | 40.0% | |
| CCAAAGTGTGCAATTCACTT+TGG | + | chr4_1:78043176-78043195 | None:intergenic | 40.0% | |
| CCAAAGTGAATTGCACACTT+TGG | - | chr4_1:78043173-78043192 | Msa0574480:CDS | 40.0% | |
| !! | ATTGCACACTTTGGAATAGC+AGG | - | chr4_1:78043182-78043201 | Msa0574480:CDS | 40.0% |
| ! | AATTGCACACTTTGGAAGAG+TGG | - | chr4_1:78043347-78043366 | Msa0574480:CDS | 40.0% |
| ! | ATTGCACACTTTGGAAGAGT+GGG | - | chr4_1:78043348-78043367 | Msa0574480:CDS | 40.0% |
| !! | GGAGTCGTTTGAGTTGTATA+AGG | - | chr4_1:78043369-78043388 | Msa0574480:CDS | 40.0% |
| AATCAGGCACAAATCATGCT+TGG | - | chr4_1:78043623-78043642 | Msa0574480:CDS | 40.0% | |
| ! | TGCTGTCATTTCACAACCTT+TGG | - | chr4_1:78043688-78043707 | Msa0574480:intron | 40.0% |
| !! | GGAGCTATTGGTTGAACTTT+TGG | + | chr4_1:78043752-78043771 | None:intergenic | 40.0% |
| !! | ACTGGTTGCTGATTGTTTTG+AGG | + | chr4_1:78043773-78043792 | None:intergenic | 40.0% |
| ! | TGAACACTTGGTCTTTGTGT+CGG | + | chr4_1:78043800-78043819 | None:intergenic | 40.0% |
| ! | TGAGATTGATGACTCGTTGT+AGG | + | chr4_1:78043944-78043963 | None:intergenic | 40.0% |
| AAATGCCACAACAGCCTAAA+GGG | - | chr4_1:78043987-78044006 | Msa0574480:intron | 40.0% | |
| TGTGGAAGTTGTGATGATTG+TGG | + | chr4_1:78044046-78044065 | None:intergenic | 40.0% | |
| CTGTGAAGATGAATGAACAG+AGG | + | chr4_1:78044080-78044099 | None:intergenic | 40.0% | |
| ! | AGAGGCATATGTGAAAATCC+AGG | + | chr4_1:78044163-78044182 | None:intergenic | 40.0% |
| ! | TTAGGTTTTCAACATGCTGG+TGG | - | chr4_1:78044265-78044284 | Msa0574480:intron | 40.0% |
| ! | GACTGAGATGATTGTTGACT+TGG | + | chr4_1:78044462-78044481 | None:intergenic | 40.0% |
| GTATGTTGTGCTACAACTGT+TGG | - | chr4_1:78044492-78044511 | Msa0574480:intron | 40.0% | |
| TCACACATCACAACAAACCT+TGG | + | chr4_1:78045162-78045181 | None:intergenic | 40.0% | |
| ! | TGTGATGTGTGATGATGCAA+AGG | - | chr4_1:78045170-78045189 | Msa0574480:intron | 40.0% |
| GCATATTTCGCTGACAACTA+CGG | + | chr4_1:78045212-78045231 | None:intergenic | 40.0% | |
| TAGTTGTCAGCGAAATATGC+AGG | - | chr4_1:78045212-78045231 | Msa0574480:intron | 40.0% | |
| GATCAGAAATGGGGTAAAGA+TGG | - | chr4_1:78045352-78045371 | Msa0574480:intron | 40.0% | |
| TGAAACCAATTAACACCGGA+AGG | - | chr4_1:78045439-78045458 | Msa0574480:intron | 40.0% | |
| GCAGCAATGACAAATTTGTC+AGG | + | chr4_1:78045489-78045508 | None:intergenic | 40.0% | |
| !! | GAAGTCATGCTTTTTGTGTC+AGG | - | chr4_1:78045692-78045711 | Msa0574480:intron | 40.0% |
| !! | TCATGCTTTTTGTGTCAGGT+TGG | - | chr4_1:78045696-78045715 | Msa0574480:intron | 40.0% |
| TGAGCAGAAACCATAGATGA+TGG | + | chr4_1:78045843-78045862 | None:intergenic | 40.0% | |
| TCTATGGTTTCTGCTCAGAT+CGG | - | chr4_1:78045846-78045865 | Msa0574480:CDS | 40.0% | |
| TTCACAATAATTACCGCAGG+AGG | + | chr4_1:78045894-78045913 | None:intergenic | 40.0% | |
| AGAGAATATCAATAGGCTGC+AGG | + | chr4_1:78045941-78045960 | None:intergenic | 40.0% | |
| ACTTGATTTCTTTGTTCCGG+AGG | + | chr4_1:78046052-78046071 | None:intergenic | 40.0% | |
| ATCTCCCACTCCTTTCAATT+TGG | - | chr4_1:78046124-78046143 | Msa0574480:five_prime_UTR | 40.0% | |
| CTACACCAAATTGAAAGGAG+TGG | + | chr4_1:78046132-78046151 | None:intergenic | 40.0% | |
| ACTTCCTCTTACAAAGGTCA+AGG | - | chr4_1:78046316-78046335 | Msa0574480:intron | 40.0% | |
| CTTCCTCTTACAAAGGTCAA+GGG | - | chr4_1:78046317-78046336 | Msa0574480:intron | 40.0% | |
| TAACCCTTGACCTTTGTAAG+AGG | + | chr4_1:78046323-78046342 | None:intergenic | 40.0% | |
| ! | GACTGTGAGAGGTTTTGCAT+CGG | - | chr4_1:78041260-78041279 | Msa0574480:three_prime_UTR | 45.0% |
| ATCGGCAATCAGGTTTACGA+CGG | - | chr4_1:78041278-78041297 | Msa0574480:exon | 45.0% | |
| ATGGCCGGAAAACAAGTAAG+CGG | - | chr4_1:78041336-78041355 | Msa0574480:CDS | 45.0% | |
| AGGGTGAGAAAGAGAGAAAG+AGG | + | chr4_1:78041451-78041470 | None:intergenic | 45.0% | |
| CTTATCTCACTAAGTGGGGT+CGG | + | chr4_1:78042183-78042202 | None:intergenic | 45.0% | |
| ACATCACTAGCAATGCCCTA+TGG | + | chr4_1:78042283-78042302 | None:intergenic | 45.0% | |
| !! | TGATGTGTCGGTTACAGCTT+TGG | - | chr4_1:78042297-78042316 | Msa0574480:intron | 45.0% |
| TGGTTCAGTTCATATGCAGC+TGG | - | chr4_1:78042384-78042403 | Msa0574480:intron | 45.0% | |
| GGTTCAGTTCATATGCAGCT+GGG | - | chr4_1:78042385-78042404 | Msa0574480:intron | 45.0% | |
| !! | GCTGGGATTGTTTCTGTTGT+AGG | - | chr4_1:78042402-78042421 | Msa0574480:intron | 45.0% |
| TAGCGAACCTGTGCTTACTT+TGG | - | chr4_1:78042493-78042512 | Msa0574480:intron | 45.0% | |
| AGCTAAGGTTGTGCAAGGTA+TGG | - | chr4_1:78042574-78042593 | Msa0574480:intron | 45.0% | |
| AAATGAGGTCGGCACAAATG+GGG | + | chr4_1:78042805-78042824 | None:intergenic | 45.0% | |
| CTAAATGAGGTCGGCACAAA+TGG | + | chr4_1:78042807-78042826 | None:intergenic | 45.0% | |
| ! | TTTGTGCCGACCTCATTTAG+TGG | - | chr4_1:78042807-78042826 | Msa0574480:intron | 45.0% |
| ! | TTGTGCCGACCTCATTTAGT+GGG | - | chr4_1:78042808-78042827 | Msa0574480:intron | 45.0% |
| CAGCACAAGATGTGCACAAA+TGG | + | chr4_1:78042867-78042886 | None:intergenic | 45.0% | |
| TTTGTGCACATCTTGTGCTG+TGG | - | chr4_1:78042867-78042886 | Msa0574480:intron | 45.0% | |
| AGTGTGCAATTCACTTTGGG+GGG | + | chr4_1:78043172-78043191 | None:intergenic | 45.0% | |
| GGCACAAATCATGCTTGGAA+TGG | - | chr4_1:78043628-78043647 | Msa0574480:CDS | 45.0% | |
| CTCAAACTCAAATTCCTCCC+AGG | - | chr4_1:78043873-78043892 | Msa0574480:intron | 45.0% | |
| !!! | TGATTTTGGTGTTTCCTGGG+AGG | + | chr4_1:78043890-78043909 | None:intergenic | 45.0% |
| !!! | GGCTGATTTTGGTGTTTCCT+GGG | + | chr4_1:78043893-78043912 | None:intergenic | 45.0% |
| !!! | AGGCTGATTTTGGTGTTTCC+TGG | + | chr4_1:78043894-78043913 | None:intergenic | 45.0% |
| ! | GCATATGAAACTGGCACTGA+AGG | + | chr4_1:78043914-78043933 | None:intergenic | 45.0% |
| GGAACAGCAGCATATGAAAC+TGG | + | chr4_1:78043923-78043942 | None:intergenic | 45.0% | |
| CAAATGCCACAACAGCCTAA+AGG | - | chr4_1:78043986-78044005 | Msa0574480:intron | 45.0% | |
| AACAGATGCTGGAGCTACTT+GGG | + | chr4_1:78044023-78044042 | None:intergenic | 45.0% | |
| GATGATTGTGGAACAGATGC+TGG | + | chr4_1:78044034-78044053 | None:intergenic | 45.0% | |
| GAAGATGAATGAACAGAGGG+TGG | + | chr4_1:78044076-78044095 | None:intergenic | 45.0% | |
| !! | GGCATTTGAGTTGGATGAAG+TGG | + | chr4_1:78044103-78044122 | None:intergenic | 45.0% |
| GAAAATCCAGGAGTCTGCAA+TGG | + | chr4_1:78044151-78044170 | None:intergenic | 45.0% | |
| TAAATTGGCACCAATCGGTG+GGG | + | chr4_1:78044248-78044267 | None:intergenic | 45.0% | |
| CTAAATTGGCACCAATCGGT+GGG | + | chr4_1:78044249-78044268 | None:intergenic | 45.0% | |
| TGGCTTACATGAAAGATGGG+CGG | + | chr4_1:78044310-78044329 | None:intergenic | 45.0% | |
| AACGTAGATCCAACACTAGG+AGG | + | chr4_1:78044417-78044436 | None:intergenic | 45.0% | |
| GTGACACTTCAGACGATGTT+AGG | - | chr4_1:78044688-78044707 | Msa0574480:intron | 45.0% | |
| ! | TTATCTTGAGTTGCTGCTCC+TGG | - | chr4_1:78044809-78044828 | Msa0574480:intron | 45.0% |
| ! | CATTTTCGGAATAAGCCACC+AGG | + | chr4_1:78044830-78044849 | None:intergenic | 45.0% |
| TCGGCTACATGGATCCTAAT+GGG | - | chr4_1:78044927-78044946 | Msa0574480:intron | 45.0% | |
| GTGAAGTGTGAAGTAGACAG+TGG | - | chr4_1:78045109-78045128 | Msa0574480:intron | 45.0% | |
| GGACCAAAGAATTGAGACCA+AGG | - | chr4_1:78045142-78045161 | Msa0574480:intron | 45.0% | |
| ! | TGTGTGATGATGCAAAGGAG+TGG | - | chr4_1:78045175-78045194 | Msa0574480:intron | 45.0% |
| ! | GTGTGATGATGCAAAGGAGT+GGG | - | chr4_1:78045176-78045195 | Msa0574480:intron | 45.0% |
| TTGTCAGCGAAATATGCAGG+TGG | - | chr4_1:78045215-78045234 | Msa0574480:intron | 45.0% | |
| AACCAATTAACACCGGAAGG+AGG | - | chr4_1:78045442-78045461 | Msa0574480:intron | 45.0% | |
| CTGCTGAAATCAGACCCAAA+TGG | + | chr4_1:78045729-78045748 | None:intergenic | 45.0% | |
| TCTGATTTCAGCAGTCAAGC+TGG | - | chr4_1:78045735-78045754 | Msa0574480:intron | 45.0% | |
| GAGAATCTAGCACAGCATTC+TGG | - | chr4_1:78045807-78045826 | Msa0574480:CDS | 45.0% | |
| AGGCTGCAGGACAATTTCAA+GGG | + | chr4_1:78045928-78045947 | None:intergenic | 45.0% | |
| TAGGCTGCAGGACAATTTCA+AGG | + | chr4_1:78045929-78045948 | None:intergenic | 45.0% | |
| GGTAGGAGATTTATCTGCTC+CGG | + | chr4_1:78046031-78046050 | None:intergenic | 45.0% | |
| GCAGATAAATCTCCTACCTC+CGG | - | chr4_1:78046033-78046052 | Msa0574480:CDS | 45.0% | |
| GATTTCTTTGTTCCGGAGGT+AGG | + | chr4_1:78046048-78046067 | None:intergenic | 45.0% | |
| TAAGAATCGCACGCACGAAG+CGG | - | chr4_1:78041233-78041252 | Msa0574480:three_prime_UTR | 50.0% | |
| !! | GAGGTTTTGCATCGGCAATC+AGG | - | chr4_1:78041268-78041287 | Msa0574480:three_prime_UTR | 50.0% |
| GCAATCAGGTTTACGACGGA+CGG | - | chr4_1:78041282-78041301 | Msa0574480:exon | 50.0% | |
| !! | CTCGCCGCTTACTTGTTTTC+CGG | + | chr4_1:78041343-78041362 | None:intergenic | 50.0% |
| GGAAAACAAGTAAGCGGCGA+GGG | - | chr4_1:78041342-78041361 | Msa0574480:CDS | 50.0% | |
| !! | GGATCTGTTTGGCTTGTTGC+TGG | + | chr4_1:78041532-78041551 | None:intergenic | 50.0% |
| CGACCCCACTTAGTGAGATA+AGG | - | chr4_1:78042181-78042200 | Msa0574480:intron | 50.0% | |
| ! | GGGCATTGCTAGTGATGTGT+CGG | - | chr4_1:78042285-78042304 | Msa0574480:intron | 50.0% |
| TGCTGAGCTAAGGTTGTGCA+AGG | - | chr4_1:78042569-78042588 | Msa0574480:intron | 50.0% | |
| ! | GTGTTGCTAGAAAGGGGTTG+TGG | - | chr4_1:78042607-78042626 | Msa0574480:intron | 50.0% |
| TTCACGGACGCTCTTTCAGT+CGG | - | chr4_1:78042996-78043015 | Msa0574480:intron | 50.0% | |
| AATGGTGCAGTCGCAACAAG+CGG | - | chr4_1:78043646-78043665 | Msa0574480:intron | 50.0% | |
| ATTGGAGCAGGCTGAACACT+TGG | + | chr4_1:78043812-78043831 | None:intergenic | 50.0% | |
| TGCACAGGCAATATTGGAGC+AGG | + | chr4_1:78043824-78043843 | None:intergenic | 50.0% | |
| GCTCCAATATTGCCTGTGCA+AGG | - | chr4_1:78043824-78043843 | Msa0574480:intron | 50.0% | |
| CCACCTTGCACAGGCAATAT+TGG | + | chr4_1:78043830-78043849 | None:intergenic | 50.0% | |
| CCAATATTGCCTGTGCAAGG+TGG | - | chr4_1:78043827-78043846 | Msa0574480:intron | 50.0% | |
| TCTTGTATGCCACCTTGCAC+AGG | + | chr4_1:78043839-78043858 | None:intergenic | 50.0% | |
| GGTGGCATACAAGATCAAGC+TGG | - | chr4_1:78043845-78043864 | Msa0574480:intron | 50.0% | |
| !! | CTGGCACTGAAGGCTGATTT+TGG | + | chr4_1:78043904-78043923 | None:intergenic | 50.0% |
| TGCAACGAATGTGCAGCTGT+GGG | + | chr4_1:78043968-78043987 | None:intergenic | 50.0% | |
| TTGCAACGAATGTGCAGCTG+TGG | + | chr4_1:78043969-78043988 | None:intergenic | 50.0% | |
| AGATGCCCTTTAGGCTGTTG+TGG | + | chr4_1:78043995-78044014 | None:intergenic | 50.0% | |
| ACAGATGCTGGAGCTACTTG+GGG | + | chr4_1:78044022-78044041 | None:intergenic | 50.0% | |
| GAACAGATGCTGGAGCTACT+TGG | + | chr4_1:78044024-78044043 | None:intergenic | 50.0% | |
| ! | ACAGAGGGTGGAGGTATATG+TGG | + | chr4_1:78044064-78044083 | None:intergenic | 50.0% |
| GATGAATGAACAGAGGGTGG+AGG | + | chr4_1:78044073-78044092 | None:intergenic | 50.0% | |
| GAGGCAGTTGGCATTTGAGT+TGG | + | chr4_1:78044112-78044131 | None:intergenic | 50.0% | |
| CATCAACCATTGCAGACTCC+TGG | - | chr4_1:78044142-78044161 | Msa0574480:intron | 50.0% | |
| GTTTGCACTGAAGGTGGTCT+GGG | + | chr4_1:78044208-78044227 | None:intergenic | 50.0% | |
| TGGAAGGTTTGCACTGAAGG+TGG | + | chr4_1:78044214-78044233 | None:intergenic | 50.0% | |
| GGATGGAAGGTTTGCACTGA+AGG | + | chr4_1:78044217-78044236 | None:intergenic | 50.0% | |
| ACCAATCGGTGGGGGATATT+GGG | + | chr4_1:78044239-78044258 | None:intergenic | 50.0% | |
| AAATTGGCACCAATCGGTGG+GGG | + | chr4_1:78044247-78044266 | None:intergenic | 50.0% | |
| CCTAAATTGGCACCAATCGG+TGG | + | chr4_1:78044250-78044269 | None:intergenic | 50.0% | |
| !! | CCACCGATTGGTGCCAATTT+AGG | - | chr4_1:78044247-78044266 | Msa0574480:intron | 50.0% |
| GGTGCAAAACCTCCTAGTGT+TGG | - | chr4_1:78044405-78044424 | Msa0574480:intron | 50.0% | |
| GGGAACGTAGATCCAACACT+AGG | + | chr4_1:78044420-78044439 | None:intergenic | 50.0% | |
| TTGGATCTACGTTCCCACCA+GGG | - | chr4_1:78044424-78044443 | Msa0574480:intron | 50.0% | |
| CAGAGCATGACAAACACCCA+TGG | + | chr4_1:78044543-78044562 | None:intergenic | 50.0% | |
| TGGGTGTTTGTCATGCTCTG+TGG | - | chr4_1:78044543-78044562 | Msa0574480:intron | 50.0% | |
| CTTATCCCACCAAGTGGTGT+CGG | - | chr4_1:78044908-78044927 | Msa0574480:intron | 50.0% | |
| GTCGGCTACATGGATCCTAA+TGG | - | chr4_1:78044926-78044945 | Msa0574480:intron | 50.0% | |
| GACATGGCAGACATCCCATT+AGG | + | chr4_1:78044944-78044963 | None:intergenic | 50.0% | |
| ! | CTCCTCCTTCCGGTGTTAAT+TGG | + | chr4_1:78045447-78045466 | None:intergenic | 50.0% |
| TGCTGTGCTAGATTCTCCGA+GGG | + | chr4_1:78045804-78045823 | None:intergenic | 50.0% | |
| ATGCTGTGCTAGATTCTCCG+AGG | + | chr4_1:78045805-78045824 | None:intergenic | 50.0% | |
| TCCTCAGGGACCATCATCTA+TGG | - | chr4_1:78045830-78045849 | Msa0574480:CDS | 50.0% | |
| ! | ACCATAGATGATGGTCCCTG+AGG | + | chr4_1:78045834-78045853 | None:intergenic | 50.0% |
| CATGCAGTTGACACCAGACA+TGG | - | chr4_1:78045970-78045989 | Msa0574480:CDS | 50.0% | |
| GTTGACACCAGACATGGAGA+AGG | - | chr4_1:78045976-78045995 | Msa0574480:CDS | 50.0% | |
| AGCAATGCCTTCTCCATGTC+TGG | + | chr4_1:78045986-78046005 | None:intergenic | 50.0% | |
| GGTGGGACTTCCTCTTACAA+AGG | - | chr4_1:78046310-78046329 | Msa0574480:intron | 50.0% | |
| AAGAATCGCACGCACGAAGC+GGG | - | chr4_1:78041234-78041253 | Msa0574480:three_prime_UTR | 55.0% | |
| AGGTTTACGACGGACGGCAA+AGG | - | chr4_1:78041288-78041307 | Msa0574480:exon | 55.0% | |
| CGACAACGAGGTCTTCGCAA+TGG | - | chr4_1:78041317-78041336 | Msa0574480:CDS | 55.0% | |
| AACGAGGTCTTCGCAATGGC+CGG | - | chr4_1:78041321-78041340 | Msa0574480:CDS | 55.0% | |
| CGGAAAACAAGTAAGCGGCG+AGG | - | chr4_1:78041341-78041360 | Msa0574480:CDS | 55.0% | |
| CGAGGGTTTATCAGCGAACC+TGG | - | chr4_1:78041359-78041378 | Msa0574480:CDS | 55.0% | |
| GGTTTATCAGCGAACCTGGC+CGG | - | chr4_1:78041363-78041382 | Msa0574480:CDS | 55.0% | |
| GATTCTTCGACATTCCGGCC+AGG | + | chr4_1:78041380-78041399 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr4_1:78042175-78042194 | None:intergenic | 55.0% | |
| GGTGCGGTATTTGTGCAGCT+AGG | - | chr4_1:78042347-78042366 | Msa0574480:intron | 55.0% | |
| !! | GGTCTTTGTGTCGGCTGTAC+TGG | + | chr4_1:78043791-78043810 | None:intergenic | 55.0% |
| TGGGGAGTCAGATGCCCTTT+AGG | + | chr4_1:78044004-78044023 | None:intergenic | 55.0% | |
| AATGCCAACTGCCTCGAGTC+AGG | - | chr4_1:78044117-78044136 | Msa0574480:intron | 55.0% | |
| GGTTTGCACTGAAGGTGGTC+TGG | + | chr4_1:78044209-78044228 | None:intergenic | 55.0% | |
| TGGGGGATATTGGGGATGGA+AGG | + | chr4_1:78044230-78044249 | None:intergenic | 55.0% | |
| CCAATCGGTGGGGGATATTG+GGG | + | chr4_1:78044238-78044257 | None:intergenic | 55.0% | |
| CACCAATCGGTGGGGGATAT+TGG | + | chr4_1:78044240-78044259 | None:intergenic | 55.0% | |
| CATGAAAGATGGGCGGAGCA+AGG | + | chr4_1:78044303-78044322 | None:intergenic | 55.0% | |
| GTTGGATCTACGTTCCCACC+AGG | - | chr4_1:78044423-78044442 | Msa0574480:intron | 55.0% | |
| ! | TCTTGAGTTGCTGCTCCTGG+TGG | - | chr4_1:78044812-78044831 | Msa0574480:intron | 55.0% |
| ! | CCACTTGGTGGGATAAGGCT+TGG | + | chr4_1:78044905-78044924 | None:intergenic | 55.0% |
| ! | CCAAGCCTTATCCCACCAAG+TGG | - | chr4_1:78044902-78044921 | Msa0574480:intron | 55.0% |
| ! | CGACACCACTTGGTGGGATA+AGG | + | chr4_1:78044910-78044929 | None:intergenic | 55.0% |
| TGTAGCCGACACCACTTGGT+GGG | + | chr4_1:78044916-78044935 | None:intergenic | 55.0% | |
| ATGTAGCCGACACCACTTGG+TGG | + | chr4_1:78044917-78044936 | None:intergenic | 55.0% | |
| !! | ACCAAGTGGTGTCGGCTACA+TGG | - | chr4_1:78044916-78044935 | Msa0574480:intron | 55.0% |
| TCCATGTAGCCGACACCACT+TGG | + | chr4_1:78044920-78044939 | None:intergenic | 55.0% | |
| AGAGGGTCTTCTTGGATGCC+TGG | - | chr4_1:78045777-78045796 | Msa0574480:intron | 55.0% | |
| TTCTTGGATGCCTGGTCCCT+CGG | - | chr4_1:78045785-78045804 | Msa0574480:intron | 55.0% | |
| AGCACAGCATTCTGGTCCTC+AGG | - | chr4_1:78045815-78045834 | Msa0574480:CDS | 55.0% | |
| GCACAGCATTCTGGTCCTCA+GGG | - | chr4_1:78045816-78045835 | Msa0574480:CDS | 55.0% | |
| ! | GTGCTGCTAATCAGCCTCCT+CGG | - | chr4_1:78045868-78045887 | Msa0574480:intron | 55.0% |
| ATAATTACCGCAGGAGGCCG+AGG | + | chr4_1:78045888-78045907 | None:intergenic | 55.0% | |
| !! | GGAGAAGGCATTGCTTCAGC+AGG | - | chr4_1:78045991-78046010 | Msa0574480:CDS | 55.0% |
| GCAGGTCATGAGTCTCACAC+CGG | - | chr4_1:78046009-78046028 | Msa0574480:CDS | 55.0% | |
| ! | TGGTTGATGCGCCTGACTCG+AGG | + | chr4_1:78044131-78044150 | None:intergenic | 60.0% |
| GGTGGCAATGGTGGTTGCAG+AGG | + | chr4_1:78044181-78044200 | None:intergenic | 60.0% | |
| ACTGAAGGTGGTCTGGGCTG+CGG | + | chr4_1:78044202-78044221 | None:intergenic | 60.0% | |
| TCGGTGGGGGATATTGGGGA+TGG | + | chr4_1:78044234-78044253 | None:intergenic | 60.0% | |
| CCCCAATATCCCCCACCGAT+TGG | - | chr4_1:78044235-78044254 | Msa0574480:intron | 60.0% | |
| ATCTACGTTCCCACCAGGGC+AGG | - | chr4_1:78044428-78044447 | Msa0574480:intron | 60.0% | |
| GTAGTAGTGCCTGCCCTGGT+GGG | + | chr4_1:78044440-78044459 | None:intergenic | 60.0% | |
| ! | CTTGGTAGTAGTGCCTGCCC+TGG | + | chr4_1:78044444-78044463 | None:intergenic | 60.0% |
| GCTAGATTCTCCGAGGGACC+AGG | + | chr4_1:78045798-78045817 | None:intergenic | 60.0% | |
| AATCGCACGCACGAAGCGGG+AGG | - | chr4_1:78041237-78041256 | Msa0574480:three_prime_UTR | 65.0% | |
| ATCGCACGCACGAAGCGGGA+GGG | - | chr4_1:78041238-78041257 | Msa0574480:three_prime_UTR | 65.0% | |
| GAAGCGGGAGGGACTGTGAG+AGG | - | chr4_1:78041249-78041268 | Msa0574480:three_prime_UTR | 65.0% | |
| ACGACGGACGGCAAAGGCTG+CGG | - | chr4_1:78041294-78041313 | Msa0574480:CDS | 65.0% | |
| CAAAGGCTGCGGCGACAACG+AGG | - | chr4_1:78041305-78041324 | Msa0574480:CDS | 65.0% | |
| ! | TGCGCCTGACTCGAGGCAGT+TGG | + | chr4_1:78044124-78044143 | None:intergenic | 65.0% |
| GGTAGTAGTGCCTGCCCTGG+TGG | + | chr4_1:78044441-78044460 | None:intergenic | 65.0% | |
| ATTACCGCAGGAGGCCGAGG+AGG | + | chr4_1:78045885-78045904 | None:intergenic | 65.0% | |
| CTGGGCTGCGGTGGCAATGG+TGG | + | chr4_1:78044190-78044209 | None:intergenic | 70.0% | |
| GGTCTGGGCTGCGGTGGCAA+TGG | + | chr4_1:78044193-78044212 | None:intergenic | 70.0% | |
| GAAGGTGGTCTGGGCTGCGG+TGG | + | chr4_1:78044199-78044218 | None:intergenic | 70.0% | |
| TCAGCCTCCTCGGCCTCCTG+CGG | - | chr4_1:78045878-78045897 | Msa0574480:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 78041006 | 78046389 | 78041006 | ID=Msa0574480;Name=Msa0574480 |
| chr4_1 | mRNA | 78041006 | 78046389 | 78041006 | ID=Msa0574480-mRNA-1;Parent=Msa0574480;Name=Msa0574480-mRNA-1;_AED=0.06;_eAED=0.06;_QI=145|1|1|1|0.85|0.75|8|287|395 |
| chr4_1 | exon | 78041006 | 78041418 | 78041006 | ID=Msa0574480-mRNA-1:exon:27618;Parent=Msa0574480-mRNA-1 |
| chr4_1 | exon | 78041496 | 78041681 | 78041496 | ID=Msa0574480-mRNA-1:exon:27617;Parent=Msa0574480-mRNA-1 |
| chr4_1 | exon | 78042904 | 78042993 | 78042904 | ID=Msa0574480-mRNA-1:exon:27616;Parent=Msa0574480-mRNA-1 |
| chr4_1 | exon | 78043074 | 78043649 | 78043074 | ID=Msa0574480-mRNA-1:exon:27615;Parent=Msa0574480-mRNA-1 |
| chr4_1 | exon | 78043728 | 78043766 | 78043728 | ID=Msa0574480-mRNA-1:exon:27614;Parent=Msa0574480-mRNA-1 |
| chr4_1 | exon | 78045806 | 78045883 | 78045806 | ID=Msa0574480-mRNA-1:exon:27613;Parent=Msa0574480-mRNA-1 |
| chr4_1 | exon | 78045967 | 78046177 | 78045967 | ID=Msa0574480-mRNA-1:exon:27612;Parent=Msa0574480-mRNA-1 |
| chr4_1 | exon | 78046363 | 78046389 | 78046363 | ID=Msa0574480-mRNA-1:exon:27611;Parent=Msa0574480-mRNA-1 |
| chr4_1 | five_prime_UTR | 78046363 | 78046389 | 78046363 | ID=Msa0574480-mRNA-1:five_prime_utr;Parent=Msa0574480-mRNA-1 |
| chr4_1 | five_prime_UTR | 78046060 | 78046177 | 78046060 | ID=Msa0574480-mRNA-1:five_prime_utr;Parent=Msa0574480-mRNA-1 |
| chr4_1 | CDS | 78045967 | 78046059 | 78045967 | ID=Msa0574480-mRNA-1:cds;Parent=Msa0574480-mRNA-1 |
| chr4_1 | CDS | 78045806 | 78045883 | 78045806 | ID=Msa0574480-mRNA-1:cds;Parent=Msa0574480-mRNA-1 |
| chr4_1 | CDS | 78043728 | 78043766 | 78043728 | ID=Msa0574480-mRNA-1:cds;Parent=Msa0574480-mRNA-1 |
| chr4_1 | CDS | 78043074 | 78043649 | 78043074 | ID=Msa0574480-mRNA-1:cds;Parent=Msa0574480-mRNA-1 |
| chr4_1 | CDS | 78042904 | 78042993 | 78042904 | ID=Msa0574480-mRNA-1:cds;Parent=Msa0574480-mRNA-1 |
| chr4_1 | CDS | 78041496 | 78041681 | 78041496 | ID=Msa0574480-mRNA-1:cds;Parent=Msa0574480-mRNA-1 |
| chr4_1 | CDS | 78041293 | 78041418 | 78041293 | ID=Msa0574480-mRNA-1:cds;Parent=Msa0574480-mRNA-1 |
| chr4_1 | three_prime_UTR | 78041006 | 78041292 | 78041006 | ID=Msa0574480-mRNA-1:three_prime_utr;Parent=Msa0574480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
