Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581290 | XP_003609386.1 | 96.898 | 677 | 10 | 1 | 1 | 677 | 1 | 666 | 0.0 | 1355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581290 | sp|Q9CXF4|TBC15_MOUSE | 45.429 | 350 | 185 | 3 | 295 | 643 | 251 | 595 | 2.27e-100 | 324 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581290 | G7JE75 | 96.898 | 677 | 10 | 1 | 1 | 677 | 1 | 666 | 0.0 | 1355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0581290 | Msa1300990 | 0.950523 | 1.380081e-108 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581290 | MtrunA17_Chr4g0064141 | 96.898 | 677 | 10 | 1 | 1 | 677 | 1 | 666 | 0.0 | 1355 |
| Msa0581290 | MtrunA17_Chr1g0183581 | 31.104 | 299 | 172 | 5 | 317 | 584 | 15 | 310 | 5.75e-41 | 155 |
| Msa0581290 | MtrunA17_Chr1g0146661 | 33.505 | 194 | 109 | 1 | 470 | 643 | 390 | 583 | 2.15e-33 | 135 |
| Msa0581290 | MtrunA17_Chr3g0127461 | 34.021 | 194 | 108 | 1 | 470 | 643 | 345 | 538 | 4.69e-33 | 134 |
| Msa0581290 | MtrunA17_Chr4g0041821 | 29.958 | 237 | 116 | 4 | 442 | 630 | 181 | 415 | 2.30e-31 | 127 |
| Msa0581290 | MtrunA17_Chr2g0319591 | 29.200 | 250 | 125 | 4 | 442 | 641 | 185 | 432 | 5.86e-31 | 126 |
| Msa0581290 | MtrunA17_Chr2g0329651 | 40.141 | 142 | 82 | 2 | 445 | 585 | 378 | 517 | 1.80e-26 | 115 |
| Msa0581290 | MtrunA17_Chr3g0121451 | 26.543 | 324 | 170 | 11 | 362 | 622 | 91 | 409 | 3.07e-21 | 97.1 |
| Msa0581290 | MtrunA17_Chr8g0378291 | 26.543 | 324 | 170 | 11 | 362 | 622 | 102 | 420 | 3.11e-18 | 87.8 |
| Msa0581290 | MtrunA17_Chr4g0033831 | 24.351 | 308 | 192 | 10 | 361 | 638 | 143 | 439 | 2.15e-15 | 79.3 |
| Msa0581290 | MtrunA17_Chr2g0329691 | 24.324 | 296 | 177 | 11 | 361 | 625 | 136 | 415 | 5.66e-15 | 77.8 |
| Msa0581290 | MtrunA17_Chr6g0456341 | 26.230 | 183 | 125 | 5 | 442 | 619 | 129 | 306 | 2.37e-11 | 65.9 |
| Msa0581290 | MtrunA17_Chr5g0448071 | 27.660 | 141 | 92 | 4 | 467 | 602 | 182 | 317 | 8.89e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581290 | AT5G52580.1 | 69.591 | 684 | 183 | 11 | 1 | 674 | 3 | 671 | 0.0 | 929 |
| Msa0581290 | AT5G52580.3 | 68.986 | 690 | 183 | 12 | 1 | 674 | 3 | 677 | 0.0 | 922 |
| Msa0581290 | AT5G52580.2 | 67.903 | 701 | 183 | 12 | 1 | 674 | 3 | 688 | 0.0 | 919 |
| Msa0581290 | AT4G28550.1 | 32.727 | 275 | 145 | 5 | 348 | 585 | 42 | 313 | 4.80e-39 | 149 |
| Msa0581290 | AT2G20440.1 | 25.876 | 371 | 192 | 8 | 348 | 638 | 42 | 409 | 7.81e-38 | 146 |
| Msa0581290 | AT2G20440.2 | 25.876 | 371 | 192 | 8 | 348 | 638 | 42 | 409 | 7.81e-38 | 146 |
| Msa0581290 | AT4G28550.2 | 31.579 | 304 | 167 | 6 | 317 | 582 | 10 | 310 | 1.02e-37 | 143 |
| Msa0581290 | AT4G28550.3 | 31.353 | 303 | 167 | 6 | 317 | 581 | 10 | 309 | 1.03e-37 | 144 |
| Msa0581290 | AT2G20440.3 | 30.897 | 301 | 165 | 7 | 348 | 609 | 42 | 338 | 5.32e-37 | 142 |
| Msa0581290 | AT5G54780.1 | 28.941 | 387 | 172 | 10 | 342 | 630 | 30 | 411 | 1.00e-36 | 143 |
| Msa0581290 | AT4G27100.2 | 32.459 | 305 | 151 | 9 | 342 | 595 | 30 | 330 | 1.69e-35 | 139 |
| Msa0581290 | AT4G27100.1 | 32.459 | 305 | 151 | 9 | 342 | 595 | 30 | 330 | 2.09e-35 | 139 |
| Msa0581290 | AT5G41940.1 | 35.533 | 197 | 107 | 1 | 467 | 643 | 347 | 543 | 4.81e-34 | 137 |
| Msa0581290 | AT3G49350.1 | 34.021 | 194 | 108 | 1 | 470 | 643 | 335 | 528 | 3.63e-32 | 132 |
| Msa0581290 | AT5G24390.1 | 33.981 | 206 | 115 | 1 | 470 | 654 | 322 | 527 | 1.00e-31 | 130 |
| Msa0581290 | AT2G20440.4 | 27.509 | 269 | 147 | 6 | 416 | 638 | 27 | 293 | 1.97e-31 | 125 |
| Msa0581290 | AT5G53570.1 | 34.536 | 194 | 106 | 2 | 470 | 643 | 343 | 535 | 5.75e-31 | 128 |
| Msa0581290 | AT5G53570.2 | 34.536 | 194 | 106 | 2 | 470 | 643 | 370 | 562 | 9.16e-31 | 128 |
| Msa0581290 | AT3G59570.1 | 40.141 | 142 | 82 | 2 | 445 | 585 | 369 | 508 | 2.35e-28 | 121 |
| Msa0581290 | AT3G59570.2 | 40.000 | 145 | 84 | 2 | 442 | 585 | 366 | 508 | 2.50e-28 | 121 |
| Msa0581290 | AT3G59570.3 | 40.141 | 142 | 82 | 2 | 445 | 585 | 369 | 508 | 2.68e-28 | 121 |
| Msa0581290 | AT2G43490.1 | 33.333 | 174 | 113 | 2 | 413 | 585 | 333 | 504 | 9.43e-27 | 116 |
| Msa0581290 | AT2G43490.7 | 33.333 | 174 | 113 | 2 | 413 | 585 | 333 | 504 | 9.43e-27 | 116 |
| Msa0581290 | AT2G43490.3 | 33.333 | 174 | 113 | 2 | 413 | 585 | 333 | 504 | 9.43e-27 | 116 |
| Msa0581290 | AT2G43490.2 | 33.333 | 174 | 113 | 2 | 413 | 585 | 333 | 504 | 9.43e-27 | 116 |
| Msa0581290 | AT2G43490.4 | 33.333 | 174 | 113 | 2 | 413 | 585 | 333 | 504 | 9.56e-27 | 116 |
| Msa0581290 | AT2G43490.6 | 33.333 | 174 | 113 | 2 | 413 | 585 | 329 | 500 | 1.03e-26 | 116 |
| Msa0581290 | AT2G43490.8 | 33.333 | 174 | 113 | 2 | 413 | 585 | 329 | 500 | 1.03e-26 | 116 |
| Msa0581290 | AT2G43490.5 | 33.333 | 174 | 113 | 2 | 413 | 585 | 333 | 504 | 1.40e-26 | 115 |
| Msa0581290 | AT4G13730.3 | 28.662 | 314 | 165 | 12 | 362 | 622 | 110 | 417 | 5.90e-22 | 99.8 |
| Msa0581290 | AT4G13730.1 | 27.077 | 325 | 167 | 12 | 362 | 622 | 110 | 428 | 2.93e-21 | 97.8 |
| Msa0581290 | AT4G13730.2 | 26.761 | 284 | 143 | 9 | 362 | 583 | 110 | 390 | 1.57e-18 | 89.0 |
| Msa0581290 | AT1G04830.2 | 24.691 | 324 | 176 | 12 | 362 | 622 | 106 | 424 | 6.16e-18 | 87.8 |
| Msa0581290 | AT1G04830.1 | 24.691 | 324 | 176 | 12 | 362 | 622 | 106 | 424 | 8.09e-18 | 87.0 |
| Msa0581290 | AT2G30710.1 | 24.832 | 298 | 186 | 10 | 357 | 628 | 125 | 410 | 8.27e-16 | 80.9 |
| Msa0581290 | AT3G02460.4 | 28.000 | 175 | 118 | 4 | 442 | 611 | 130 | 301 | 1.28e-13 | 72.8 |
| Msa0581290 | AT3G02460.1 | 27.322 | 183 | 123 | 5 | 442 | 619 | 130 | 307 | 1.45e-13 | 73.2 |
| Msa0581290 | AT3G02460.3 | 27.322 | 183 | 123 | 5 | 442 | 619 | 130 | 307 | 2.36e-13 | 72.4 |
| Msa0581290 | AT3G02460.5 | 29.252 | 147 | 98 | 3 | 442 | 583 | 130 | 275 | 6.99e-12 | 67.4 |
| Msa0581290 | AT3G02460.2 | 29.252 | 147 | 98 | 3 | 442 | 583 | 130 | 275 | 8.57e-12 | 67.4 |
| Msa0581290 | AT5G15930.1 | 26.230 | 183 | 125 | 5 | 442 | 619 | 127 | 304 | 1.10e-11 | 67.4 |
| Msa0581290 | AT3G07890.1 | 24.370 | 238 | 147 | 7 | 371 | 602 | 110 | 320 | 3.47e-11 | 66.2 |
| Msa0581290 | AT3G07890.4 | 24.370 | 238 | 147 | 7 | 371 | 602 | 110 | 320 | 3.47e-11 | 66.2 |
| Msa0581290 | AT3G07890.5 | 24.370 | 238 | 147 | 7 | 371 | 602 | 110 | 320 | 3.47e-11 | 66.2 |
| Msa0581290 | AT3G07890.2 | 24.370 | 238 | 147 | 7 | 371 | 602 | 110 | 320 | 3.47e-11 | 66.2 |
| Msa0581290 | AT3G07890.3 | 24.370 | 238 | 147 | 7 | 371 | 602 | 110 | 320 | 3.47e-11 | 66.2 |
Find 180 sgRNAs with CRISPR-Local
Find 727 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGGGACTTCCTTGTTTA+TGG | 0.149479 | 4_1:+86628207 | Msa0581290:CDS |
| AACCTGCCACTGGTTCTTTA+TGG | 0.166577 | 4_1:-86635168 | None:intergenic |
| GTAGGTCTGGGGTTTGCTTT+TGG | 0.187245 | 4_1:+86635073 | Msa0581290:intron |
| CGATGCCGTAGTAAAATAAT+TGG | 0.203950 | 4_1:+86638574 | Msa0581290:CDS |
| GGACCTCTCTATTCAGGTTT+TGG | 0.244998 | 4_1:+86632766 | Msa0581290:CDS |
| TCGACCTTGATGCAACATTA+AGG | 0.261570 | 4_1:+86638653 | Msa0581290:CDS |
| GAACACTTACACTTCCATTA+TGG | 0.267903 | 4_1:-86632697 | None:intergenic |
| AAAATCAGACTAATGGATTC+AGG | 0.269981 | 4_1:+86632846 | Msa0581290:CDS |
| TGCGCTTGTGGGAAGTATTA+TGG | 0.274467 | 4_1:+86638497 | Msa0581290:CDS |
| CTAACGTTCACAACATTAAC+AGG | 0.283217 | 4_1:-86633022 | None:intergenic |
| CCAACTCAGTTTGCTATTAG+TGG | 0.288769 | 4_1:+86628166 | Msa0581290:CDS |
| AGGATGAATCAGAGGCATTT+TGG | 0.291501 | 4_1:+86636611 | Msa0581290:CDS |
| CCGAAGTCTTCCACTGTTGC+AGG | 0.294859 | 4_1:+86632941 | Msa0581290:CDS |
| CTAAACGATTCACAAAATTC+AGG | 0.295954 | 4_1:+86635436 | Msa0581290:CDS |
| CCAGAAAACTTTGTCTTCCT+TGG | 0.305068 | 4_1:+86632577 | Msa0581290:intron |
| TACTCGGGACCTCTCTATTC+AGG | 0.318831 | 4_1:+86632760 | Msa0581290:CDS |
| ACAGAAACCTTTACACCATT+AGG | 0.321041 | 4_1:+86628456 | Msa0581290:CDS |
| CACCACTGTCATTCCTCTCT+TGG | 0.325902 | 4_1:-86632673 | None:intergenic |
| ACAACATTAACAGGAGAAAA+AGG | 0.328959 | 4_1:-86633013 | None:intergenic |
| CTGACTTCTTTACCGACTTC+AGG | 0.337387 | 4_1:-86635136 | None:intergenic |
| TCCCGCAGAACGTTGACATT+TGG | 0.342591 | 4_1:-86635614 | None:intergenic |
| AAACCGCGGCAATCTCCTTT+AGG | 0.342609 | 4_1:+86634141 | Msa0581290:CDS |
| TCCTCCATCACAAACAATAT+TGG | 0.344910 | 4_1:-86636592 | None:intergenic |
| GTGGAGTACCGGGTGGGATA+CGG | 0.348937 | 4_1:-86638720 | None:intergenic |
| CTTTATGTCTTGGTCTCCTA+TGG | 0.349395 | 4_1:-86632727 | None:intergenic |
| CATTAGGGCGGTGCCGTTTA+CGG | 0.353169 | 4_1:+86628472 | Msa0581290:CDS |
| CAGAAACCTTTACACCATTA+GGG | 0.356617 | 4_1:+86628457 | Msa0581290:CDS |
| GGAGAGAAAGAACGCGCGTT+TGG | 0.359846 | 4_1:-86627703 | None:intergenic |
| GATCAAGGTTAGTCTCTATA+CGG | 0.368494 | 4_1:-86632886 | None:intergenic |
| AAAGGGCATAACGCGGATAA+TGG | 0.370518 | 4_1:+86628329 | Msa0581290:CDS |
| TCATTCTACAACTTCGATCT+TGG | 0.375392 | 4_1:+86635653 | Msa0581290:CDS |
| TAAAATAATTGGGGAGCAAA+TGG | 0.381967 | 4_1:+86638585 | Msa0581290:CDS |
| GATGCCGTAGTAAAATAATT+GGG | 0.382480 | 4_1:+86638575 | Msa0581290:CDS |
| CGTAAACGGCACCGCCCTAA+TGG | 0.383654 | 4_1:-86628471 | None:intergenic |
| TCGGAGGATCAAGGTTAGTC+TGG | 0.383989 | 4_1:-86632922 | None:intergenic |
| GATAATGGTTTGTCTGATAA+AGG | 0.386252 | 4_1:+86628344 | Msa0581290:CDS |
| ACAACACTTCATCATCTTGT+TGG | 0.388064 | 4_1:-86638777 | None:intergenic |
| ATCTGCTTTCTCAGATTCTC+AGG | 0.389099 | 4_1:+86632982 | Msa0581290:CDS |
| GCGGACTTGACCACGAATTA+CGG | 0.389201 | 4_1:+86634938 | Msa0581290:CDS |
| TTCAGAGAAAATCAGACTAA+TGG | 0.389365 | 4_1:+86632839 | Msa0581290:CDS |
| GTTGCAGTTGGTGGAGCTAT+TGG | 0.391128 | 4_1:+86637727 | Msa0581290:intron |
| ATCATTGTTGTTCTATCGTC+AGG | 0.398946 | 4_1:+86628542 | Msa0581290:CDS |
| AAGCTCATCTTCTAATGAAC+TGG | 0.399668 | 4_1:+86628099 | Msa0581290:CDS |
| ATAGGTTACGGCAGAAATAC+TGG | 0.401927 | 4_1:-86638967 | None:intergenic |
| CATTAGAAGATGAGCTTTGT+TGG | 0.405449 | 4_1:-86628093 | None:intergenic |
| GCTCATTTATAAACTTCAAA+AGG | 0.419284 | 4_1:-86638618 | None:intergenic |
| ATGAATTGCAACATTATCCT+TGG | 0.422003 | 4_1:-86628143 | None:intergenic |
| ACAAAATTCAGGGAAAGAAA+AGG | 0.423410 | 4_1:+86635447 | Msa0581290:CDS |
| GTCTCCAATATTGTTTGTGA+TGG | 0.428173 | 4_1:+86636588 | Msa0581290:CDS |
| AATGACAGTGGTGTCCATAA+TGG | 0.428525 | 4_1:+86632683 | Msa0581290:CDS |
| TGTCTTCCTTGGAACTGCCC+AGG | 0.434407 | 4_1:+86632588 | Msa0581290:CDS |
| ACCTTCCTCACCAGCACATA+TGG | 0.435399 | 4_1:-86638692 | None:intergenic |
| GTCTTCCTTGGAACTGCCCA+GGG | 0.435537 | 4_1:+86632589 | Msa0581290:CDS |
| CGACCTTGATGCAACATTAA+GGG | 0.437072 | 4_1:+86638654 | Msa0581290:CDS |
| TGGAGTACCGGGTGGGATAC+GGG | 0.437108 | 4_1:-86638719 | None:intergenic |
| TGTAGAATGAATATGTCAAC+AGG | 0.444122 | 4_1:-86635640 | None:intergenic |
| TCCGCGTTATGCCCTTTGTA+AGG | 0.444284 | 4_1:-86628323 | None:intergenic |
| CCTCCGCTATATTTCTATAG+TGG | 0.446004 | 4_1:+86631258 | Msa0581290:CDS |
| CGAGAAAACAATGCGCTTGT+GGG | 0.446217 | 4_1:+86638486 | Msa0581290:CDS |
| CAAAATTCAGGGAAAGAAAA+GGG | 0.447159 | 4_1:+86635448 | Msa0581290:CDS |
| GGATCGTTAACTTTATGTCT+TGG | 0.448813 | 4_1:-86632737 | None:intergenic |
| AGGAGGCATACTCCTGCTCT+TGG | 0.450918 | 4_1:+86628509 | Msa0581290:CDS |
| TATACGGGTTCTCCTCTCAT+TGG | 0.452372 | 4_1:-86632870 | None:intergenic |
| CTTCGATCTTGGTTATTGTC+AGG | 0.459717 | 4_1:+86635664 | Msa0581290:CDS |
| GTCTCTCTGATGGAACGTCT+TGG | 0.461320 | 4_1:+86636640 | Msa0581290:CDS |
| CCATCGTTGCCTGTTGATGA+TGG | 0.464463 | 4_1:+86638742 | Msa0581290:CDS |
| ATTGACCTGACATCCGTAAA+CGG | 0.471464 | 4_1:-86628485 | None:intergenic |
| TCCAAATGTCAACGTTCTGC+GGG | 0.479036 | 4_1:+86635613 | Msa0581290:CDS |
| AATAGTAGTTACATAGGTTA+CGG | 0.480061 | 4_1:-86638979 | None:intergenic |
| TAAAACGAACCATCATCAAC+AGG | 0.484134 | 4_1:-86638751 | None:intergenic |
| AGGCAACGATGGTGGAGTAC+CGG | 0.485305 | 4_1:-86638731 | None:intergenic |
| AGGTTAGTCTGGGAAGACTT+TGG | 0.494059 | 4_1:-86632911 | None:intergenic |
| TCCAATATTGTTTGTGATGG+AGG | 0.497976 | 4_1:+86636591 | Msa0581290:CDS |
| GGGAAGACTTTGGAGGATCA+AGG | 0.498455 | 4_1:-86632901 | None:intergenic |
| TTACGGATGTCAGGTCAATC+AGG | 0.498746 | 4_1:+86628489 | Msa0581290:CDS |
| GTAGAGTATCTCCTCGGCTC+AGG | 0.505620 | 4_1:+86635413 | Msa0581290:intron |
| GAGTTGTGAAGTTGTTTCAC+GGG | 0.507249 | 4_1:-86632816 | None:intergenic |
| AAATCAGACTAATGGATTCA+GGG | 0.512843 | 4_1:+86632847 | Msa0581290:CDS |
| TGACAATTTGTCGCTAGTGT+GGG | 0.517788 | 4_1:+86634116 | Msa0581290:CDS |
| TGACCACGAATTACGGAATG+AGG | 0.518735 | 4_1:+86634945 | Msa0581290:CDS |
| CATACCTCTTTAGAACCTAA+AGG | 0.519668 | 4_1:-86634156 | None:intergenic |
| TAAACGATTCACAAAATTCA+GGG | 0.520860 | 4_1:+86635437 | Msa0581290:CDS |
| CCACTAATAGCAAACTGAGT+TGG | 0.524205 | 4_1:-86628166 | None:intergenic |
| ACGAGAAAACAATGCGCTTG+TGG | 0.524210 | 4_1:+86638485 | Msa0581290:CDS |
| CGGTGCCGTTTACGGATGTC+AGG | 0.524230 | 4_1:+86628480 | Msa0581290:CDS |
| ATTACATTCGTTGATTCTGA+AGG | 0.526108 | 4_1:+86634871 | Msa0581290:CDS |
| CATGTTGCTTTATTGTAGCA+AGG | 0.529261 | 4_1:-86631296 | None:intergenic |
| CCTGCAACAGTGGAAGACTT+CGG | 0.529538 | 4_1:-86632941 | None:intergenic |
| TAGATCACTCACTTTCTATG+AGG | 0.529636 | 4_1:+86635580 | Msa0581290:CDS |
| AAGAATAATAGTAGTTACAT+AGG | 0.531134 | 4_1:-86638985 | None:intergenic |
| TACTCTGAAAATCATTTACT+AGG | 0.531390 | 4_1:-86632044 | None:intergenic |
| GAGATGTGTCTTCGAGGCGA+AGG | 0.534477 | 4_1:-86627750 | None:intergenic |
| TCAGCATATGTTGAGTCATA+CGG | 0.535823 | 4_1:-86635104 | None:intergenic |
| CGTGCAAGAGGAACAGCCCT+GGG | 0.536269 | 4_1:-86632605 | None:intergenic |
| GATAGAGAGATGTGTCTTCG+AGG | 0.536656 | 4_1:-86627756 | None:intergenic |
| AGAGTTGTGAAGTTGTTTCA+CGG | 0.540999 | 4_1:-86632817 | None:intergenic |
| ATAAAGTTAACGATCCTACT+CGG | 0.541310 | 4_1:+86632744 | Msa0581290:CDS |
| TTGACAATTTGTCGCTAGTG+TGG | 0.541332 | 4_1:+86634115 | Msa0581290:CDS |
| AACAGCCCTGGGCAGTTCCA+AGG | 0.543642 | 4_1:-86632594 | None:intergenic |
| AGACTTGGATACCTTACAAA+GGG | 0.544915 | 4_1:+86628312 | Msa0581290:intron |
| TTAGTCTGGGAAGACTTTGG+AGG | 0.547486 | 4_1:-86632908 | None:intergenic |
| GGCAACGATGGTGGAGTACC+GGG | 0.547756 | 4_1:-86638730 | None:intergenic |
| ATATATTGCCATCCAAGAGC+AGG | 0.548583 | 4_1:-86628521 | None:intergenic |
| GACAATTTGTCGCTAGTGTG+GGG | 0.550600 | 4_1:+86634117 | Msa0581290:CDS |
| ATCTCCTTTAGGTTCTAAAG+AGG | 0.552905 | 4_1:+86634152 | Msa0581290:CDS |
| AGAAAATCTGTGATGTGAGA+AGG | 0.554615 | 4_1:-86627724 | None:intergenic |
| AGCAACATGTTCTTCTTGTG+AGG | 0.554703 | 4_1:+86631310 | Msa0581290:CDS |
| TAAGTGTTCCTCAGTTCCAT+AGG | 0.558117 | 4_1:+86632711 | Msa0581290:CDS |
| ATCCAAATGTCAACGTTCTG+CGG | 0.559406 | 4_1:+86635612 | Msa0581290:CDS |
| CGGAGGATCAAGGTTAGTCT+GGG | 0.560263 | 4_1:-86632921 | None:intergenic |
| AAGTTTATAAATGAGCTAAG+TGG | 0.561440 | 4_1:+86638625 | Msa0581290:CDS |
| TGGAAGACTTCGGAGGATCA+AGG | 0.561546 | 4_1:-86632931 | None:intergenic |
| TTACATTCGTTGATTCTGAA+GGG | 0.563166 | 4_1:+86634872 | Msa0581290:CDS |
| ACGTGCAAGAGGAACAGCCC+TGG | 0.564141 | 4_1:-86632606 | None:intergenic |
| ATAGAAATATAGCGGAGGAT+AGG | 0.564378 | 4_1:-86631253 | None:intergenic |
| GGCATACTCCTGCTCTTGGA+TGG | 0.564573 | 4_1:+86628513 | Msa0581290:CDS |
| ATCAAGGTTAGTCTCTATAC+GGG | 0.567707 | 4_1:-86632885 | None:intergenic |
| CTCTTGGTTCTCATTCAAAG+TGG | 0.569677 | 4_1:-86632657 | None:intergenic |
| GCACCGCCCTAATGGTGTAA+AGG | 0.570683 | 4_1:-86628463 | None:intergenic |
| TGCTGAAATTGTATATTCCA+AGG | 0.571019 | 4_1:+86628126 | Msa0581290:CDS |
| AGATTGAAGTTAATTAAGCA+AGG | 0.571779 | 4_1:+86628190 | Msa0581290:CDS |
| TCCATATGTGCTGGTGAGGA+AGG | 0.573594 | 4_1:+86638691 | Msa0581290:CDS |
| AGATCACTCACTTTCTATGA+GGG | 0.574815 | 4_1:+86635581 | Msa0581290:CDS |
| GACCATAAAGAACCAGTGGC+AGG | 0.582467 | 4_1:+86635166 | Msa0581290:CDS |
| AAACCTCATTCCGTAATTCG+TGG | 0.586426 | 4_1:-86634948 | None:intergenic |
| TGCTTAAAATAGTTATGCAA+TGG | 0.587889 | 4_1:-86637755 | None:intergenic |
| ATAGAGGTGCAGATGTTCTG+AGG | 0.591446 | 4_1:-86638530 | None:intergenic |
| TAGAGGTGCAGATGTTCTGA+GGG | 0.593316 | 4_1:-86638529 | None:intergenic |
| TCATCAGCTGACAGATCTGA+AGG | 0.596320 | 4_1:-86632632 | None:intergenic |
| TCTGAAGGTCCACGTGCAAG+AGG | 0.598034 | 4_1:-86632617 | None:intergenic |
| CCGCTATATTTCTATAGTGG+AGG | 0.600648 | 4_1:+86631261 | Msa0581290:CDS |
| AGGGCTGTTCCTCTTGCACG+TGG | 0.602086 | 4_1:+86632608 | Msa0581290:CDS |
| GAGGCTCTATCCATATGTGC+TGG | 0.605582 | 4_1:+86638682 | Msa0581290:CDS |
| ATCACTCACTTTCTATGAGG+GGG | 0.605738 | 4_1:+86635583 | Msa0581290:CDS |
| AGTAAATGAAAACCTGCCAC+TGG | 0.606222 | 4_1:-86635178 | None:intergenic |
| GGTGCAGCCCGTATCCCACC+CGG | 0.607073 | 4_1:+86638712 | Msa0581290:CDS |
| TAAAGTTAACGATCCTACTC+GGG | 0.607207 | 4_1:+86632745 | Msa0581290:CDS |
| GGAAACAAAAGAAATAATTG+AGG | 0.607828 | 4_1:-86637787 | None:intergenic |
| GATTGAAGTTAATTAAGCAA+GGG | 0.611023 | 4_1:+86628191 | Msa0581290:CDS |
| CCATCATCAACAGGCAACGA+TGG | 0.611551 | 4_1:-86638742 | None:intergenic |
| TGAATAGAGAGGTCCCGAGT+AGG | 0.612993 | 4_1:-86632758 | None:intergenic |
| TCATCTTCTAATGAACTGGA+AGG | 0.615316 | 4_1:+86628103 | Msa0581290:CDS |
| TCATCAACAGGCAACGATGG+TGG | 0.619207 | 4_1:-86638739 | None:intergenic |
| TACGGCAGAAATACTGGCGG+CGG | 0.619819 | 4_1:-86638961 | None:intergenic |
| CATCCCTTAATGTTGCATCA+AGG | 0.620820 | 4_1:-86638657 | None:intergenic |
| CAGACTTGGATACCTTACAA+AGG | 0.621609 | 4_1:+86628311 | Msa0581290:intron |
| AACGATGGTGGAGTACCGGG+TGG | 0.622722 | 4_1:-86638727 | None:intergenic |
| TGCAACATTAAGGGATGCAG+AGG | 0.622894 | 4_1:+86638663 | Msa0581290:CDS |
| ATGGATTCAGGGCCAATGAG+AGG | 0.623055 | 4_1:+86632858 | Msa0581290:CDS |
| AGCAGCGTAATCGCTGTCGT+CGG | 0.627659 | 4_1:-86627860 | None:intergenic |
| ACGATGGTGGAGTACCGGGT+GGG | 0.629201 | 4_1:-86638726 | None:intergenic |
| CTTCATGTAGAGTATCTCCT+CGG | 0.629342 | 4_1:+86635407 | Msa0581290:intron |
| GATCACTCACTTTCTATGAG+GGG | 0.630531 | 4_1:+86635582 | Msa0581290:CDS |
| TCTATCCATATGTGCTGGTG+AGG | 0.632114 | 4_1:+86638687 | Msa0581290:CDS |
| TGCTTTCTCAGATTCTCAGG+AGG | 0.635889 | 4_1:+86632985 | Msa0581290:CDS |
| CGTAATCGCTGTCGTCGGAG+AGG | 0.638919 | 4_1:-86627855 | None:intergenic |
| CTTTGAATGAGAACCAAGAG+AGG | 0.640947 | 4_1:+86632660 | Msa0581290:CDS |
| TAAATTGAATCAAAATCCAG+CGG | 0.641822 | 4_1:-86637808 | None:intergenic |
| ATGCCGTAGTAAAATAATTG+GGG | 0.644371 | 4_1:+86638576 | Msa0581290:CDS |
| AGACTGCAACACATACATAG+AGG | 0.648137 | 4_1:-86638546 | None:intergenic |
| AAATATAAATGGTAGGTCTG+GGG | 0.648548 | 4_1:+86635062 | Msa0581290:intron |
| ATCGATTATCACCATAAACA+AGG | 0.649905 | 4_1:-86628218 | None:intergenic |
| AGGGCTTATTGAGAAAGATG+TGG | 0.650713 | 4_1:+86635467 | Msa0581290:CDS |
| TGAGAGAGAATTCCTGAAGT+CGG | 0.654091 | 4_1:+86635124 | Msa0581290:CDS |
| TCAAATCAAGAAATGCACAA+TGG | 0.656782 | 4_1:-86638880 | None:intergenic |
| TCTCCAAAACCTGAATAGAG+AGG | 0.657138 | 4_1:-86632769 | None:intergenic |
| CTTGGTCTCCTATGGAACTG+AGG | 0.665618 | 4_1:-86632719 | None:intergenic |
| GAATCGTTTAGCCTGAGCCG+AGG | 0.669165 | 4_1:-86635424 | None:intergenic |
| CGGATGTCAGGTCAATCAGG+AGG | 0.673482 | 4_1:+86628492 | Msa0581290:CDS |
| CCACTATAGAAATATAGCGG+AGG | 0.673609 | 4_1:-86631258 | None:intergenic |
| GAACCTAAAGGAGATTGCCG+CGG | 0.677661 | 4_1:-86634144 | None:intergenic |
| CCTCCACTATAGAAATATAG+CGG | 0.683681 | 4_1:-86631261 | None:intergenic |
| TGTGATGGAGGATGAATCAG+AGG | 0.686242 | 4_1:+86636603 | Msa0581290:CDS |
| ACCTTACAAAGGGCATAACG+CGG | 0.687799 | 4_1:+86628322 | Msa0581290:CDS |
| ACGAGACCATAAAGAACCAG+TGG | 0.699407 | 4_1:+86635162 | Msa0581290:CDS |
| CGCTAGTGTGGGGAAAACCG+CGG | 0.700201 | 4_1:+86634127 | Msa0581290:CDS |
| GCAACAGTGGAAGACTTCGG+AGG | 0.708531 | 4_1:-86632938 | None:intergenic |
| AACCAAGAGAGGAATGACAG+TGG | 0.713755 | 4_1:+86632671 | Msa0581290:CDS |
| AAACCTTTACACCATTAGGG+CGG | 0.720822 | 4_1:+86628460 | Msa0581290:CDS |
| GGTTACGGCAGAAATACTGG+CGG | 0.798972 | 4_1:-86638964 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTCTTTTGTTAATTTT+CGG | + | chr4_1:86628240-86628259 | Msa0581290:intron | 10.0% |
| !!! | ATATATTACTTTTTTGTTTA+TGG | - | chr4_1:86628892-86628911 | None:intergenic | 10.0% |
| !! | ACATTATTAATTATATACAA+AGG | - | chr4_1:86634058-86634077 | None:intergenic | 10.0% |
| !! | ATGGAATATATAAATATAAA+TGG | + | chr4_1:86635051-86635070 | Msa0581290:intron | 10.0% |
| !! | AATATATAAATATAAATGGT+AGG | + | chr4_1:86635055-86635074 | Msa0581290:intron | 10.0% |
| !! | TGTGATATTAAATTTAAAAA+AGG | + | chr4_1:86635835-86635854 | Msa0581290:intron | 10.0% |
| !! | GTGATATTAAATTTAAAAAA+GGG | + | chr4_1:86635836-86635855 | Msa0581290:intron | 10.0% |
| !! | AATAATATAATGTTAAGAAA+AGG | - | chr4_1:86636836-86636855 | None:intergenic | 10.0% |
| !! | AAAACAATGTAAATTATTAT+TGG | + | chr4_1:86637523-86637542 | Msa0581290:intron | 10.0% |
| !!! | AAAAATTCAAAATTGATAAT+GGG | - | chr4_1:86638273-86638292 | None:intergenic | 10.0% |
| !! | AAAAAATTCAAAATTGATAA+TGG | - | chr4_1:86638274-86638293 | None:intergenic | 10.0% |
| !! | ATAATATTTATTTACATTTC+AGG | + | chr4_1:86638452-86638471 | Msa0581290:intron | 10.0% |
| !! | TAATATTTATTTACATTTCA+GGG | + | chr4_1:86638453-86638472 | Msa0581290:intron | 10.0% |
| !!! | ACTCATATTTTCTAATAAAA+TGG | - | chr4_1:86629604-86629623 | None:intergenic | 15.0% |
| !!! | GATTTATTCAATAATTTTCT+TGG | - | chr4_1:86629827-86629846 | None:intergenic | 15.0% |
| !! | TTAATTATGATTTCATTTCA+TGG | - | chr4_1:86630040-86630059 | None:intergenic | 15.0% |
| !! | TGAAATGAAATCATAATTAA+TGG | + | chr4_1:86630040-86630059 | Msa0581290:intron | 15.0% |
| !! | TATATATATATATATGAGGA+GGG | - | chr4_1:86630113-86630132 | None:intergenic | 15.0% |
| !! | ATATATATATATATATGAGG+AGG | - | chr4_1:86630114-86630133 | None:intergenic | 15.0% |
| !! | TATATATATATATATAGCAC+AGG | + | chr4_1:86630147-86630166 | Msa0581290:intron | 15.0% |
| !! | ATATATATATATATAGCACA+GGG | + | chr4_1:86630148-86630167 | Msa0581290:intron | 15.0% |
| !!! | TACAAAATATTTTGAAATAG+CGG | + | chr4_1:86630270-86630289 | Msa0581290:intron | 15.0% |
| !!! | AGTAATGTTTAAAAAAGTAT+AGG | + | chr4_1:86630456-86630475 | Msa0581290:intron | 15.0% |
| !! | GTTAATGTTATAATGAATAT+TGG | + | chr4_1:86630538-86630557 | Msa0581290:intron | 15.0% |
| !!! | ATTTTTTTTATCGATATAAC+TGG | - | chr4_1:86630965-86630984 | None:intergenic | 15.0% |
| !! | TTATATCGATAAAAAAAATG+TGG | + | chr4_1:86630966-86630985 | Msa0581290:intron | 15.0% |
| !! | AGCTTATAAAAATATTATTC+AGG | - | chr4_1:86631592-86631611 | None:intergenic | 15.0% |
| !! | TTTGAAAATTCATTCATATA+TGG | + | chr4_1:86631673-86631692 | Msa0581290:intron | 15.0% |
| !! | AAAATGTGATATTAAACATT+TGG | - | chr4_1:86631974-86631993 | None:intergenic | 15.0% |
| !! | TGAAAATATTTCCAAAAAAT+AGG | + | chr4_1:86632332-86632351 | Msa0581290:intron | 15.0% |
| !!! | TAAAATTCTTTCCTATTTTT+TGG | - | chr4_1:86632346-86632365 | None:intergenic | 15.0% |
| !!! | TTTTAATCCTATGAATAATA+TGG | + | chr4_1:86633322-86633341 | Msa0581290:intron | 15.0% |
| !! | GTTTGAGTAAATAATTAATA+TGG | - | chr4_1:86633657-86633676 | None:intergenic | 15.0% |
| !!! | TTAATTTTTAAATCTCTCAT+TGG | + | chr4_1:86634481-86634500 | Msa0581290:intron | 15.0% |
| !!! | TGAAAATAGATTTTTTATGT+TGG | + | chr4_1:86634536-86634555 | Msa0581290:intron | 15.0% |
| !! | AATTATATAGTTAGTTAAAG+AGG | + | chr4_1:86635803-86635822 | Msa0581290:intron | 15.0% |
| !! | ATTATATAGTTAGTTAAAGA+GGG | + | chr4_1:86635804-86635823 | Msa0581290:intron | 15.0% |
| !! | AAATAAATATAAGTTAGGAA+TGG | - | chr4_1:86637707-86637726 | None:intergenic | 15.0% |
| !!! | TTGTCTAATTAAGTTATTTT+AGG | + | chr4_1:86637917-86637936 | Msa0581290:intron | 15.0% |
| !!! | TAATTAAGTTATTTTAGGTT+TGG | + | chr4_1:86637922-86637941 | Msa0581290:intron | 15.0% |
| !!! | TGATGTATTTTTTTTTTTCT+AGG | + | chr4_1:86638815-86638834 | Msa0581290:three_prime_UTR | 15.0% |
| !! | AATCCAATTTCATTTCAATT+AGG | + | chr4_1:86627926-86627945 | Msa0581290:intron | 20.0% |
| !! | ATCCAATTTCATTTCAATTA+GGG | + | chr4_1:86627927-86627946 | Msa0581290:intron | 20.0% |
| !! | AATTTGAATTGTTTGTGATT+AGG | + | chr4_1:86628036-86628055 | Msa0581290:intron | 20.0% |
| !! | ATTTGAATTGTTTGTGATTA+GGG | + | chr4_1:86628037-86628056 | Msa0581290:intron | 20.0% |
| !!! | CTTTATTTTTCAGTTTATCA+TGG | + | chr4_1:86628614-86628633 | Msa0581290:intron | 20.0% |
| !! | ATATGATGTTATACTAAATC+AGG | + | chr4_1:86628698-86628717 | Msa0581290:intron | 20.0% |
| !! | TATGATGTTATACTAAATCA+GGG | + | chr4_1:86628699-86628718 | Msa0581290:intron | 20.0% |
| !! | ATTGTTAAAAGTAACCTATA+GGG | + | chr4_1:86628836-86628855 | Msa0581290:intron | 20.0% |
| !!! | TAACTTTTTATACTTACTCT+CGG | - | chr4_1:86629389-86629408 | None:intergenic | 20.0% |
| !! | TGAATTGATATCACAATTAA+TGG | - | chr4_1:86629425-86629444 | None:intergenic | 20.0% |
| !! | TTAATTGTGATATCAATTCA+TGG | + | chr4_1:86629425-86629444 | Msa0581290:intron | 20.0% |
| !! | TGAAAACAATCCAAATAAAT+GGG | + | chr4_1:86629532-86629551 | Msa0581290:intron | 20.0% |
| !! | TAATTGCAAAAGTTCATAAT+TGG | - | chr4_1:86629561-86629580 | None:intergenic | 20.0% |
| !!! | ATTTTCTAATAAAATGGCTT+TGG | - | chr4_1:86629598-86629617 | None:intergenic | 20.0% |
| !! | TCAAATTCAATAAAAAGTTG+TGG | - | chr4_1:86629711-86629730 | None:intergenic | 20.0% |
| !!! | CAATAATATGTTGATTGTTT+CGG | + | chr4_1:86629760-86629779 | Msa0581290:intron | 20.0% |
| !! | AATCATAAGTTATTACCAAA+TGG | + | chr4_1:86629843-86629862 | Msa0581290:intron | 20.0% |
| !! | ATCATAAGTTATTACCAAAT+GGG | + | chr4_1:86629844-86629863 | Msa0581290:intron | 20.0% |
| !!! | AAATAAATGGCTTATTTTTC+TGG | - | chr4_1:86629938-86629957 | None:intergenic | 20.0% |
| !! | AAAAATAAGCCATTTATTTG+AGG | + | chr4_1:86629939-86629958 | Msa0581290:intron | 20.0% |
| !! | AACTTAACATAAATCACTAA+GGG | - | chr4_1:86630758-86630777 | None:intergenic | 20.0% |
| !! | GATTTATGTTAAGTTCAATT+AGG | + | chr4_1:86630763-86630782 | Msa0581290:intron | 20.0% |
| !!! | TTAGTGTTTTTATGTAATCT+AGG | + | chr4_1:86631075-86631094 | Msa0581290:intron | 20.0% |
| !!! | TAATCTAGGTAATATTGATT+TGG | + | chr4_1:86631089-86631108 | Msa0581290:intron | 20.0% |
| !! | ATTGTAGAAAACTGAATATA+AGG | - | chr4_1:86631196-86631215 | None:intergenic | 20.0% |
| !! | TTGAAAGAAATTAAACATGT+AGG | - | chr4_1:86631355-86631374 | None:intergenic | 20.0% |
| !! | TTAATCTCAATTACTATGAT+TGG | + | chr4_1:86631804-86631823 | Msa0581290:intron | 20.0% |
| !! | CTAAAAGTAAAAAGATTAAC+TGG | - | chr4_1:86632291-86632310 | None:intergenic | 20.0% |
| !!! | CAGTTAATCTTTTTACTTTT+AGG | + | chr4_1:86632289-86632308 | Msa0581290:intron | 20.0% |
| !!! | AATTATTTTGACTAGACATT+TGG | + | chr4_1:86633089-86633108 | Msa0581290:intron | 20.0% |
| !! | CACTGAAAAGTAAAAATTAA+AGG | - | chr4_1:86633271-86633290 | None:intergenic | 20.0% |
| !!! | CAAAATTTTGGTCTAATAAA+TGG | - | chr4_1:86633402-86633421 | None:intergenic | 20.0% |
| !!! | CATTTATTAGACCAAAATTT+TGG | + | chr4_1:86633400-86633419 | Msa0581290:intron | 20.0% |
| !!! | ATATAGTAAGGTCATTTTTT+TGG | + | chr4_1:86633478-86633497 | Msa0581290:intron | 20.0% |
| !! | AAATAATTAATATGGTGAAC+TGG | - | chr4_1:86633649-86633668 | None:intergenic | 20.0% |
| !!! | GATTTTCATTTTGGTAATTA+TGG | + | chr4_1:86633811-86633830 | Msa0581290:intron | 20.0% |
| !!! | TTTTTTTTTTGTTTCTCTTC+TGG | + | chr4_1:86634088-86634107 | Msa0581290:intron | 20.0% |
| !!! | TACAAAATCTGAAAATTTTC+AGG | - | chr4_1:86634815-86634834 | None:intergenic | 20.0% |
| !! | TTTGTATGCTAATTCTTTAT+TGG | + | chr4_1:86634829-86634848 | Msa0581290:intron | 20.0% |
| !! | TTGTATGCTAATTCTTTATT+GGG | + | chr4_1:86634830-86634849 | Msa0581290:intron | 20.0% |
| !!! | ATCATTTTCAAGTTTATAGT+AGG | - | chr4_1:86635235-86635254 | None:intergenic | 20.0% |
| !! | ACAAATTTATACTTTGACAA+AGG | - | chr4_1:86635380-86635399 | None:intergenic | 20.0% |
| !!! | GTTTTTCCTTGTATTTTTTA+AGG | + | chr4_1:86635547-86635566 | Msa0581290:intron | 20.0% |
| !!! | TTTTACATTTGTATCTTATG+CGG | + | chr4_1:86636143-86636162 | Msa0581290:intron | 20.0% |
| !!! | AACACCAAAATTTTGTTTAA+AGG | + | chr4_1:86636272-86636291 | Msa0581290:intron | 20.0% |
| !!! | AAAGCCTTTAAACAAAATTT+TGG | - | chr4_1:86636279-86636298 | None:intergenic | 20.0% |
| !! | TTTATTTGTTTAATCATGCA+GGG | - | chr4_1:86636350-86636369 | None:intergenic | 20.0% |
| !! | ATTTATTTGTTTAATCATGC+AGG | - | chr4_1:86636351-86636370 | None:intergenic | 20.0% |
| !!! | TTTTGATCACGATTAAAATT+GGG | - | chr4_1:86636667-86636686 | None:intergenic | 20.0% |
| !!! | ATTTTGATCACGATTAAAAT+TGG | - | chr4_1:86636668-86636687 | None:intergenic | 20.0% |
| !!! | AATTTTAATCGTGATCAAAA+TGG | + | chr4_1:86636667-86636686 | Msa0581290:CDS | 20.0% |
| !! | AGTCATTAAAAATCAACAAT+TGG | - | chr4_1:86636770-86636789 | None:intergenic | 20.0% |
| !! | TATAGTGTCTTCAAATAATT+TGG | + | chr4_1:86636896-86636915 | Msa0581290:intron | 20.0% |
| !! | ATAGTGTCTTCAAATAATTT+GGG | + | chr4_1:86636897-86636916 | Msa0581290:intron | 20.0% |
| !!! | GTTGTGTTTTTCAATAATTT+TGG | + | chr4_1:86636954-86636973 | Msa0581290:intron | 20.0% |
| !! | TACAGTAATCAATTTCTTTA+TGG | - | chr4_1:86637207-86637226 | None:intergenic | 20.0% |
| !!! | TTTCTTTTCATGAAAATGTA+AGG | + | chr4_1:86637459-86637478 | Msa0581290:intron | 20.0% |
| !! | AAAGAAATATAGCATATATG+GGG | - | chr4_1:86637639-86637658 | None:intergenic | 20.0% |
| !! | CAAAGAAATATAGCATATAT+GGG | - | chr4_1:86637640-86637659 | None:intergenic | 20.0% |
| !! | ACAAAGAAATATAGCATATA+TGG | - | chr4_1:86637641-86637660 | None:intergenic | 20.0% |
| !! | GCAACAAATAAATATAAGTT+AGG | - | chr4_1:86637712-86637731 | None:intergenic | 20.0% |
| !!! | TTATATTTATTTGTTGCAGT+TGG | + | chr4_1:86637715-86637734 | Msa0581290:intron | 20.0% |
| !!! | GGATTTTGATTCAATTTAAA+AGG | + | chr4_1:86637813-86637832 | Msa0581290:CDS | 20.0% |
| !! | TGTATATAATGTGAAAAGTA+TGG | + | chr4_1:86637884-86637903 | Msa0581290:intron | 20.0% |
| !! | TTTATCTACAATTCTCATTT+AGG | + | chr4_1:86638418-86638437 | Msa0581290:intron | 20.0% |
| !! | AAGAATAATAGTAGTTACAT+AGG | - | chr4_1:86638988-86639007 | None:intergenic | 20.0% |
| !!! | AATTGGATTTTGAAGTGAAA+AGG | - | chr4_1:86627915-86627934 | None:intergenic | 25.0% |
| ! | AACCCTAATTGAAATGAAAT+TGG | - | chr4_1:86627932-86627951 | None:intergenic | 25.0% |
| ! | AGATTTGAATTGAATTGAAC+CGG | - | chr4_1:86627979-86627998 | None:intergenic | 25.0% |
| !! | CACTACTTTGTTTGTATTAT+TGG | + | chr4_1:86628008-86628027 | Msa0581290:intron | 25.0% |
| ! | AGATTGAAGTTAATTAAGCA+AGG | + | chr4_1:86628190-86628209 | Msa0581290:CDS | 25.0% |
| ! | GATTGAAGTTAATTAAGCAA+GGG | + | chr4_1:86628191-86628210 | Msa0581290:CDS | 25.0% |
| ! | AACAAAAAAACTTCAACACT+TGG | - | chr4_1:86628422-86628441 | None:intergenic | 25.0% |
| ! | CATTAATAACAGAACTTACA+TGG | - | chr4_1:86628668-86628687 | None:intergenic | 25.0% |
| ! | ATGATGTTATACTAAATCAG+GGG | + | chr4_1:86628700-86628719 | Msa0581290:intron | 25.0% |
| ! | AACAATGAAGAGAATAACAA+GGG | - | chr4_1:86628822-86628841 | None:intergenic | 25.0% |
| ! | TAACAATGAAGAGAATAACA+AGG | - | chr4_1:86628823-86628842 | None:intergenic | 25.0% |
| ! | CATTGTTAAAAGTAACCTAT+AGG | + | chr4_1:86628835-86628854 | Msa0581290:intron | 25.0% |
| ! | GAGTAAAGAATTTAATCAAC+TGG | + | chr4_1:86628950-86628969 | Msa0581290:intron | 25.0% |
| ! | AATCTATCTACTTATTCAGT+GGG | - | chr4_1:86629187-86629206 | None:intergenic | 25.0% |
| ! | TAAAAAGTTACTCCAAATCT+TGG | + | chr4_1:86629399-86629418 | Msa0581290:intron | 25.0% |
| !!! | TTTTGCTTTGTTTAAGAAGA+AGG | - | chr4_1:86629494-86629513 | None:intergenic | 25.0% |
| ! | GTGAAAACAATCCAAATAAA+TGG | + | chr4_1:86629531-86629550 | Msa0581290:intron | 25.0% |
| ! | TAATTGGATACCCATTTATT+TGG | - | chr4_1:86629545-86629564 | None:intergenic | 25.0% |
| !!! | GATGATTTTCTAAGATTCAT+AGG | + | chr4_1:86629866-86629885 | Msa0581290:intron | 25.0% |
| ! | TGTGGATCTATTATTGTTTA+AGG | + | chr4_1:86629889-86629908 | Msa0581290:intron | 25.0% |
| ! | CATAATTAATGGCTAAGATT+TGG | + | chr4_1:86630051-86630070 | Msa0581290:intron | 25.0% |
| ! | TAACTCTTTATACTTACTCT+TGG | + | chr4_1:86630076-86630095 | Msa0581290:intron | 25.0% |
| !!! | GGAAAAGTGTTGTTATATAA+CGG | + | chr4_1:86630184-86630203 | Msa0581290:intron | 25.0% |
| ! | TGAAAAAGGTTTCTTTAAGT+AGG | + | chr4_1:86630364-86630383 | Msa0581290:intron | 25.0% |
| !! | TTTAAAAAAGTATAGGACGA+GGG | + | chr4_1:86630463-86630482 | Msa0581290:intron | 25.0% |
| ! | GAACTTAACATAAATCACTA+AGG | - | chr4_1:86630759-86630778 | None:intergenic | 25.0% |
| !! | TGTGAATAAAATCTTTTTGC+AGG | + | chr4_1:86631225-86631244 | Msa0581290:intron | 25.0% |
| ! | ATAATATGTCATCGAAGTAT+CGG | - | chr4_1:86631386-86631405 | None:intergenic | 25.0% |
| ! | ATAAAGTTGTGATATTTACC+TGG | + | chr4_1:86631404-86631423 | Msa0581290:intron | 25.0% |
| ! | TAAAGTTGTGATATTTACCT+GGG | + | chr4_1:86631405-86631424 | Msa0581290:intron | 25.0% |
| ! | TCGTATAGTTGTATTATATC+AGG | + | chr4_1:86631490-86631509 | Msa0581290:intron | 25.0% |
| ! | AGAAAGATAACACTAGAATA+AGG | + | chr4_1:86631524-86631543 | Msa0581290:intron | 25.0% |
| ! | GTCTTTGATTATGAATACTT+TGG | + | chr4_1:86631632-86631651 | Msa0581290:intron | 25.0% |
| ! | AATGCACAAAAAATACAGTT+GGG | - | chr4_1:86631882-86631901 | None:intergenic | 25.0% |
| ! | AAATGCACAAAAAATACAGT+TGG | - | chr4_1:86631883-86631902 | None:intergenic | 25.0% |
| !! | TACTCTGAAAATCATTTACT+AGG | - | chr4_1:86632047-86632066 | None:intergenic | 25.0% |
| ! | CTTAAAAGCTTAGTTATCAA+GGG | - | chr4_1:86632226-86632245 | None:intergenic | 25.0% |
| !!! | CTTGATAACTAAGCTTTTAA+GGG | + | chr4_1:86632225-86632244 | Msa0581290:intron | 25.0% |
| !! | AAACTTATGATTTTGTATGG+AGG | - | chr4_1:86632369-86632388 | None:intergenic | 25.0% |
| !! | GAGAAACTTATGATTTTGTA+TGG | - | chr4_1:86632372-86632391 | None:intergenic | 25.0% |
| ! | TAATCAATATGTTATGCTGA+AGG | + | chr4_1:86633181-86633200 | Msa0581290:intron | 25.0% |
| ! | AATCAATATGTTATGCTGAA+GGG | + | chr4_1:86633182-86633201 | Msa0581290:intron | 25.0% |
| ! | TAATCCTATGAATAATATGG+TGG | + | chr4_1:86633325-86633344 | Msa0581290:intron | 25.0% |
| ! | AATCCTATGAATAATATGGT+GGG | + | chr4_1:86633326-86633345 | Msa0581290:intron | 25.0% |
| ! | TTGGTCTAATAAATGGATAA+TGG | - | chr4_1:86633395-86633414 | None:intergenic | 25.0% |
| ! | AAATATGGTGCAATATAGTA+AGG | + | chr4_1:86633466-86633485 | Msa0581290:intron | 25.0% |
| ! | TTACTACTTTAGACCAAAAA+TGG | + | chr4_1:86633553-86633572 | Msa0581290:intron | 25.0% |
| ! | TTTGTCTAATTTCAATTGTG+TGG | + | chr4_1:86633873-86633892 | Msa0581290:intron | 25.0% |
| !! | ATATCTGCAAATTTTGTAGT+GGG | + | chr4_1:86634018-86634037 | Msa0581290:intron | 25.0% |
| !! | AAATAACAAGTGTTTTTCCT+GGG | + | chr4_1:86634316-86634335 | Msa0581290:intron | 25.0% |
| ! | GATAACACACAATATCAAAA+TGG | - | chr4_1:86634670-86634689 | None:intergenic | 25.0% |
| !! | TTGCGAAAGAGAATATTTTA+CGG | + | chr4_1:86634916-86634935 | Msa0581290:CDS | 25.0% |
| !! | ATCCTCTGATATATCTTTTA+TGG | + | chr4_1:86635032-86635051 | Msa0581290:intron | 25.0% |
| ! | TTCCATAAAAGATATATCAG+AGG | - | chr4_1:86635037-86635056 | None:intergenic | 25.0% |
| ! | ATAAATATAAATGGTAGGTC+TGG | + | chr4_1:86635060-86635079 | Msa0581290:intron | 25.0% |
| ! | TAAATATAAATGGTAGGTCT+GGG | + | chr4_1:86635061-86635080 | Msa0581290:intron | 25.0% |
| !!! | TTTTCAAGTTTATAGTAGGA+AGG | - | chr4_1:86635231-86635250 | None:intergenic | 25.0% |
| !! | ATAAAAGAGAAGTATGTAGT+AGG | - | chr4_1:86635268-86635287 | None:intergenic | 25.0% |
| ! | TGAATTCTGAATTATGATGA+CGG | + | chr4_1:86635295-86635314 | Msa0581290:intron | 25.0% |
| ! | TAAACGATTCACAAAATTCA+GGG | + | chr4_1:86635437-86635456 | Msa0581290:CDS | 25.0% |
| ! | TTCTCACCTTAAAAAATACA+AGG | - | chr4_1:86635556-86635575 | None:intergenic | 25.0% |
| ! | CTTAATATTCATACCAGAAA+GGG | - | chr4_1:86636030-86636049 | None:intergenic | 25.0% |
| ! | TCTTAATATTCATACCAGAA+AGG | - | chr4_1:86636031-86636050 | None:intergenic | 25.0% |
| ! | TTAAGAAGCAAAGAATAATG+AGG | + | chr4_1:86636045-86636064 | Msa0581290:intron | 25.0% |
| ! | ACAACTTGAAAAATAGTTAG+TGG | + | chr4_1:86637106-86637125 | Msa0581290:intron | 25.0% |
| ! | CAACTTGAAAAATAGTTAGT+GGG | + | chr4_1:86637107-86637126 | Msa0581290:intron | 25.0% |
| ! | AACTTGAAAAATAGTTAGTG+GGG | + | chr4_1:86637108-86637127 | Msa0581290:intron | 25.0% |
| ! | AAATAATTCATGCATCTCAA+AGG | - | chr4_1:86637391-86637410 | None:intergenic | 25.0% |
| ! | AAGAAATATAGCATATATGG+GGG | - | chr4_1:86637638-86637657 | None:intergenic | 25.0% |
| ! | ATGCTATATTTCTTTGTATC+TGG | + | chr4_1:86637644-86637663 | Msa0581290:intron | 25.0% |
| ! | ATATAAGTTAGGAATGGAAA+AGG | - | chr4_1:86637701-86637720 | None:intergenic | 25.0% |
| ! | TGCTTAAAATAGTTATGCAA+TGG | - | chr4_1:86637758-86637777 | None:intergenic | 25.0% |
| ! | GGAAACAAAAGAAATAATTG+AGG | - | chr4_1:86637790-86637809 | None:intergenic | 25.0% |
| ! | TAAATTGAATCAAAATCCAG+CGG | - | chr4_1:86637811-86637830 | None:intergenic | 25.0% |
| !! | ATTCCTTGAATCTTCAATTT+TGG | + | chr4_1:86637840-86637859 | Msa0581290:intron | 25.0% |
| ! | TGGTCATAATTCAATAATTG+TGG | + | chr4_1:86637860-86637879 | Msa0581290:intron | 25.0% |
| ! | GGTCATAATTCAATAATTGT+GGG | + | chr4_1:86637861-86637880 | Msa0581290:intron | 25.0% |
| ! | ATAGTGAATCTATGTTCAAA+AGG | - | chr4_1:86637950-86637969 | None:intergenic | 25.0% |
| ! | AGGAGAAATATATTAAAGTG+AGG | - | chr4_1:86638097-86638116 | None:intergenic | 25.0% |
| ! | GCTCATTTATAAACTTCAAA+AGG | - | chr4_1:86638621-86638640 | None:intergenic | 25.0% |
| ! | AAGTTTATAAATGAGCTAAG+TGG | + | chr4_1:86638625-86638644 | Msa0581290:CDS | 25.0% |
| ! | AATAGTAGTTACATAGGTTA+CGG | - | chr4_1:86638982-86639001 | None:intergenic | 25.0% |
| ATTGTGATTGTGATTCAATC+CGG | + | chr4_1:86627957-86627976 | Msa0581290:intron | 30.0% | |
| TGCTGAAATTGTATATTCCA+AGG | + | chr4_1:86628126-86628145 | Msa0581290:CDS | 30.0% | |
| ATGAATTGCAACATTATCCT+TGG | - | chr4_1:86628146-86628165 | None:intergenic | 30.0% | |
| ATCGATTATCACCATAAACA+AGG | - | chr4_1:86628221-86628240 | None:intergenic | 30.0% | |
| ! | GATAATGGTTTGTCTGATAA+AGG | + | chr4_1:86628344-86628363 | Msa0581290:CDS | 30.0% |
| ! | AAGGTAGTTTGCATTTATAG+TGG | + | chr4_1:86628363-86628382 | Msa0581290:intron | 30.0% |
| ! | TACATGGTTGATACATATCA+GGG | - | chr4_1:86628652-86628671 | None:intergenic | 30.0% |
| ! | TTACATGGTTGATACATATC+AGG | - | chr4_1:86628653-86628672 | None:intergenic | 30.0% |
| ATAGAAGTGAAATACTACCT+TGG | + | chr4_1:86628750-86628769 | Msa0581290:intron | 30.0% | |
| TAGAAGTGAAATACTACCTT+GGG | + | chr4_1:86628751-86628770 | Msa0581290:intron | 30.0% | |
| ACAATGAAGAGAATAACAAG+GGG | - | chr4_1:86628821-86628840 | None:intergenic | 30.0% | |
| ! | TTGTTTATGGTGTTAACCTT+TGG | - | chr4_1:86628879-86628898 | None:intergenic | 30.0% |
| AATCTAATTCCCATGGATTT+AGG | + | chr4_1:86628919-86628938 | Msa0581290:intron | 30.0% | |
| ATCTAATTCCCATGGATTTA+GGG | + | chr4_1:86628920-86628939 | Msa0581290:intron | 30.0% | |
| AGAGCTTATTAACAGTACAA+TGG | - | chr4_1:86629106-86629125 | None:intergenic | 30.0% | |
| ! | TTTGCCAACTTGCTTATTAA+GGG | - | chr4_1:86629139-86629158 | None:intergenic | 30.0% |
| !! | TTTTGCCAACTTGCTTATTA+AGG | - | chr4_1:86629140-86629159 | None:intergenic | 30.0% |
| CAATCTATCTACTTATTCAG+TGG | - | chr4_1:86629188-86629207 | None:intergenic | 30.0% | |
| AAGCATAGTATATAGAATGC+TGG | + | chr4_1:86629211-86629230 | Msa0581290:intron | 30.0% | |
| TATATAGAATGCTGGAAACT+AGG | + | chr4_1:86629219-86629238 | Msa0581290:intron | 30.0% | |
| TTTGCAAACCAAGTATGTAT+TGG | + | chr4_1:86629243-86629262 | Msa0581290:intron | 30.0% | |
| TTTGTTTAAGAAGAAGGAGT+AGG | - | chr4_1:86629488-86629507 | None:intergenic | 30.0% | |
| ATTTAATCAGTCTGCACTAA+AGG | - | chr4_1:86629637-86629656 | None:intergenic | 30.0% | |
| TCTTAGAAAATCATCCCATT+TGG | - | chr4_1:86629861-86629880 | None:intergenic | 30.0% | |
| !!! | TTTTCTAAGATTCATAGGTG+TGG | + | chr4_1:86629871-86629890 | Msa0581290:intron | 30.0% |
| ATGAATCTGCCTCAAATAAA+TGG | - | chr4_1:86629951-86629970 | None:intergenic | 30.0% | |
| ! | TTTATTTGAGGCAGATTCAT+AGG | + | chr4_1:86629951-86629970 | Msa0581290:intron | 30.0% |
| ! | GCACAGGGAAATTTTATAAA+TGG | + | chr4_1:86630163-86630182 | Msa0581290:intron | 30.0% |
| TGTGTAATTTATGTGATGCA+TGG | + | chr4_1:86630421-86630440 | Msa0581290:intron | 30.0% | |
| ! | GTTTAAAAAAGTATAGGACG+AGG | + | chr4_1:86630462-86630481 | Msa0581290:intron | 30.0% |
| GCTGCATTTAATTGTTGAAT+TGG | + | chr4_1:86631009-86631028 | Msa0581290:intron | 30.0% | |
| !!! | CGTGACACTATTTATTTTGA+TGG | + | chr4_1:86631136-86631155 | Msa0581290:intron | 30.0% |
| !! | AAACATGTAGGCATTGAAAT+CGG | - | chr4_1:86631343-86631362 | None:intergenic | 30.0% |
| GTTGTATTATATCAGGATTC+AGG | + | chr4_1:86631497-86631516 | Msa0581290:intron | 30.0% | |
| TCATTCATATATGGCTTCTA+TGG | + | chr4_1:86631682-86631701 | Msa0581290:intron | 30.0% | |
| ! | ATGTTTTATGTTCTACGAGA+AGG | + | chr4_1:86631835-86631854 | Msa0581290:intron | 30.0% |
| CCTTAAAAGCTTAGTTATCA+AGG | - | chr4_1:86632227-86632246 | None:intergenic | 30.0% | |
| !! | CCTTGATAACTAAGCTTTTA+AGG | + | chr4_1:86632224-86632243 | Msa0581290:intron | 30.0% |
| !! | ATAACTAAGCTTTTAAGGGA+GGG | + | chr4_1:86632229-86632248 | Msa0581290:intron | 30.0% |
| GTTTCTCTATTCTATTGTGA+TGG | + | chr4_1:86632385-86632404 | Msa0581290:intron | 30.0% | |
| TCTAATCATCTTTCTTGCTA+GGG | - | chr4_1:86632472-86632491 | None:intergenic | 30.0% | |
| TTCTAATCATCTTTCTTGCT+AGG | - | chr4_1:86632473-86632492 | None:intergenic | 30.0% | |
| ATAAAGTTAACGATCCTACT+CGG | + | chr4_1:86632744-86632763 | Msa0581290:CDS | 30.0% | |
| TTCAGAGAAAATCAGACTAA+TGG | + | chr4_1:86632839-86632858 | Msa0581290:CDS | 30.0% | |
| !! | AAAATCAGACTAATGGATTC+AGG | + | chr4_1:86632846-86632865 | Msa0581290:CDS | 30.0% |
| !! | AAATCAGACTAATGGATTCA+GGG | + | chr4_1:86632847-86632866 | Msa0581290:CDS | 30.0% |
| ACAACATTAACAGGAGAAAA+AGG | - | chr4_1:86633016-86633035 | None:intergenic | 30.0% | |
| TTGGAAGTTAATAATACGCA+GGG | - | chr4_1:86633139-86633158 | None:intergenic | 30.0% | |
| ATTGGAAGTTAATAATACGC+AGG | - | chr4_1:86633140-86633159 | None:intergenic | 30.0% | |
| TTTACAAAACCGCATAATGA+GGG | - | chr4_1:86633209-86633228 | None:intergenic | 30.0% | |
| ! | TTTTACAAAACCGCATAATG+AGG | - | chr4_1:86633210-86633229 | None:intergenic | 30.0% |
| TATCCCACCATATTATTCAT+AGG | - | chr4_1:86633332-86633351 | None:intergenic | 30.0% | |
| TAATCTTAACCACAATACCT+TGG | - | chr4_1:86633505-86633524 | None:intergenic | 30.0% | |
| ! | ACTGGTCTAAAGTAGTAAAA+GGG | - | chr4_1:86633631-86633650 | None:intergenic | 30.0% |
| ! | AACTGGTCTAAAGTAGTAAA+AGG | - | chr4_1:86633632-86633651 | None:intergenic | 30.0% |
| ! | CATGTGCATGATTTTCATTT+TGG | + | chr4_1:86633802-86633821 | Msa0581290:intron | 30.0% |
| CTTGAATAATCTGATTGTCA+TGG | + | chr4_1:86633944-86633963 | Msa0581290:intron | 30.0% | |
| ! | CATATCTGCAAATTTTGTAG+TGG | + | chr4_1:86634017-86634036 | Msa0581290:intron | 30.0% |
| TTATATACAAAGGTGAACAG+AGG | - | chr4_1:86634048-86634067 | None:intergenic | 30.0% | |
| ! | ATTTGTTTCTTATAGACTGC+TGG | + | chr4_1:86634196-86634215 | Msa0581290:intron | 30.0% |
| TTTCATTTACAAAAGCAACG+AGG | - | chr4_1:86634299-86634318 | None:intergenic | 30.0% | |
| ! | GAAATAACAAGTGTTTTTCC+TGG | + | chr4_1:86634315-86634334 | Msa0581290:intron | 30.0% |
| ! | AATAACAAGTGTTTTTCCTG+GGG | + | chr4_1:86634317-86634336 | Msa0581290:intron | 30.0% |
| ! | AATACTGACCATTCAACTTT+TGG | - | chr4_1:86634352-86634371 | None:intergenic | 30.0% |
| AAGTTGAATGGTCAGTATTA+TGG | + | chr4_1:86634353-86634372 | Msa0581290:intron | 30.0% | |
| !!! | GTCAGTATTATGGTTTTGTA+TGG | + | chr4_1:86634363-86634382 | Msa0581290:intron | 30.0% |
| GTATGGTTTAATAGTTCTCT+TGG | + | chr4_1:86634380-86634399 | Msa0581290:intron | 30.0% | |
| !! | TAGTTGTAGAGTATTTTTGC+AGG | + | chr4_1:86634566-86634585 | Msa0581290:intron | 30.0% |
| !! | AGTTGTAGAGTATTTTTGCA+GGG | + | chr4_1:86634567-86634586 | Msa0581290:intron | 30.0% |
| !! | TTTTGAGAGAATTGTGAGAA+TGG | + | chr4_1:86634768-86634787 | Msa0581290:intron | 30.0% |
| !! | ATTACATTCGTTGATTCTGA+AGG | + | chr4_1:86634871-86634890 | Msa0581290:CDS | 30.0% |
| !! | TTACATTCGTTGATTCTGAA+GGG | + | chr4_1:86634872-86634891 | Msa0581290:CDS | 30.0% |
| AAATATAAATGGTAGGTCTG+GGG | + | chr4_1:86635062-86635081 | Msa0581290:intron | 30.0% | |
| AAGAGAAGTCTATCTTATTC+AGG | - | chr4_1:86635204-86635223 | None:intergenic | 30.0% | |
| AAAAACAAAGTCGAAAGAGA+TGG | - | chr4_1:86635327-86635346 | None:intergenic | 30.0% | |
| CTAAACGATTCACAAAATTC+AGG | + | chr4_1:86635436-86635455 | Msa0581290:CDS | 30.0% | |
| ACAAAATTCAGGGAAAGAAA+AGG | + | chr4_1:86635447-86635466 | Msa0581290:CDS | 30.0% | |
| CAAAATTCAGGGAAAGAAAA+GGG | + | chr4_1:86635448-86635467 | Msa0581290:CDS | 30.0% | |
| TGTAGAATGAATATGTCAAC+AGG | - | chr4_1:86635643-86635662 | None:intergenic | 30.0% | |
| ACAATTAAAGCTTTCCTACT+AGG | + | chr4_1:86635718-86635737 | Msa0581290:intron | 30.0% | |
| AGATTAAGCAAAAACCTAGT+AGG | - | chr4_1:86635735-86635754 | None:intergenic | 30.0% | |
| !! | AAGAATTACAACTTGCTACT+TGG | - | chr4_1:86635781-86635800 | None:intergenic | 30.0% |
| TTTAAAAAAGGGAAACTCAG+TGG | + | chr4_1:86635847-86635866 | Msa0581290:intron | 30.0% | |
| ! | AGAATAATGAGGAAGTCTTT+TGG | + | chr4_1:86636056-86636075 | Msa0581290:intron | 30.0% |
| CCACACATGCATATAAAATA+GGG | - | chr4_1:86636316-86636335 | None:intergenic | 30.0% | |
| ACCACACATGCATATAAAAT+AGG | - | chr4_1:86636317-86636336 | None:intergenic | 30.0% | |
| !! | CTATAACTGTTTTGTTGCAT+TGG | - | chr4_1:86636496-86636515 | None:intergenic | 30.0% |
| CAACAAAACAGTTATAGTTG+AGG | + | chr4_1:86636499-86636518 | Msa0581290:intron | 30.0% | |
| TTCCTAACCATCTGTTTAAA+CGG | - | chr4_1:86636526-86636545 | None:intergenic | 30.0% | |
| TGCAAAAGAGCAAACATATA+AGG | - | chr4_1:86636550-86636569 | None:intergenic | 30.0% | |
| ! | TTATATGTTTGCTCTTTTGC+AGG | + | chr4_1:86636549-86636568 | Msa0581290:intron | 30.0% |
| ! | TATATGTTTGCTCTTTTGCA+GGG | + | chr4_1:86636550-86636569 | Msa0581290:intron | 30.0% |
| ! | TCAACTTTTTGCATTATCCA+AGG | + | chr4_1:86636699-86636718 | Msa0581290:CDS | 30.0% |
| ATAGAACAAGAGATAAACCT+TGG | - | chr4_1:86636719-86636738 | None:intergenic | 30.0% | |
| !! | TAATTTTGGTCCTTACAAAG+AGG | + | chr4_1:86636968-86636987 | Msa0581290:intron | 30.0% |
| TATTTGAATCCAACATGAGA+GGG | - | chr4_1:86637169-86637188 | None:intergenic | 30.0% | |
| ATATTTGAATCCAACATGAG+AGG | - | chr4_1:86637170-86637189 | None:intergenic | 30.0% | |
| ATGTTGGATTCAAATATGAG+AGG | + | chr4_1:86637173-86637192 | Msa0581290:intron | 30.0% | |
| ! | AAATGAAAAGAAAGCACAGT+TGG | - | chr4_1:86637290-86637309 | None:intergenic | 30.0% |
| CATGAAAATGTAAGGCAAAT+AGG | + | chr4_1:86637467-86637486 | Msa0581290:intron | 30.0% | |
| GGCTGTTAGTAAATTGTTAT+TGG | + | chr4_1:86637488-86637507 | Msa0581290:intron | 30.0% | |
| ! | TATTTATTTGTTGCAGTTGG+TGG | + | chr4_1:86637718-86637737 | Msa0581290:intron | 30.0% |
| !! | ATTATTTCTTTTGTTTCCGC+TGG | + | chr4_1:86637792-86637811 | Msa0581290:CDS | 30.0% |
| TGACCAAAATTGAAGATTCA+AGG | - | chr4_1:86637846-86637865 | None:intergenic | 30.0% | |
| TGTAGAAGGCTATTACTAAA+TGG | + | chr4_1:86637978-86637997 | Msa0581290:intron | 30.0% | |
| ! | TTTTCTCAAAGCAGATCAAA+TGG | - | chr4_1:86638034-86638053 | None:intergenic | 30.0% |
| ATTAATACGCGGAGAATAAT+AGG | - | chr4_1:86638145-86638164 | None:intergenic | 30.0% | |
| GGAAGTTAAGTATTAATACG+CGG | - | chr4_1:86638156-86638175 | None:intergenic | 30.0% | |
| AATCCTTCAGAGATATATTG+GGG | - | chr4_1:86638178-86638197 | None:intergenic | 30.0% | |
| GAATCCTTCAGAGATATATT+GGG | - | chr4_1:86638179-86638198 | None:intergenic | 30.0% | |
| AGAATCCTTCAGAGATATAT+TGG | - | chr4_1:86638180-86638199 | None:intergenic | 30.0% | |
| TCTGTGCTAGAATATCATTT+CGG | + | chr4_1:86638197-86638216 | Msa0581290:intron | 30.0% | |
| !!! | TCATATTTTTGGCATTTTGG+GGG | - | chr4_1:86638313-86638332 | None:intergenic | 30.0% |
| !!! | CTCATATTTTTGGCATTTTG+GGG | - | chr4_1:86638314-86638333 | None:intergenic | 30.0% |
| !!! | CCTCATATTTTTGGCATTTT+GGG | - | chr4_1:86638315-86638334 | None:intergenic | 30.0% |
| ! | TAACATCAGCCTCATATTTT+TGG | - | chr4_1:86638324-86638343 | None:intergenic | 30.0% |
| TTTGCAAATTGCAAGTCAAT+AGG | + | chr4_1:86638366-86638385 | Msa0581290:intron | 30.0% | |
| GTTTCAGATAATTCAATGCA+AGG | - | chr4_1:86638397-86638416 | None:intergenic | 30.0% | |
| GATGCCGTAGTAAAATAATT+GGG | + | chr4_1:86638575-86638594 | Msa0581290:CDS | 30.0% | |
| ATGCCGTAGTAAAATAATTG+GGG | + | chr4_1:86638576-86638595 | Msa0581290:CDS | 30.0% | |
| TAAAATAATTGGGGAGCAAA+TGG | + | chr4_1:86638585-86638604 | Msa0581290:CDS | 30.0% | |
| TCAAATCAAGAAATGCACAA+TGG | - | chr4_1:86638883-86638902 | None:intergenic | 30.0% | |
| AGAAAATCTGTGATGTGAGA+AGG | - | chr4_1:86627727-86627746 | None:intergenic | 35.0% | |
| ! | CATTAGAAGATGAGCTTTGT+TGG | - | chr4_1:86628096-86628115 | None:intergenic | 35.0% |
| AAGCTCATCTTCTAATGAAC+TGG | + | chr4_1:86628099-86628118 | Msa0581290:CDS | 35.0% | |
| TCATCTTCTAATGAACTGGA+AGG | + | chr4_1:86628103-86628122 | Msa0581290:CDS | 35.0% | |
| ! | ATTATTTTCGCTTGCAGACT+TGG | + | chr4_1:86628297-86628316 | Msa0581290:intron | 35.0% |
| AGACTTGGATACCTTACAAA+GGG | + | chr4_1:86628312-86628331 | Msa0581290:intron | 35.0% | |
| TTTACTGCTCTGTGAAATTC+AGG | + | chr4_1:86628396-86628415 | Msa0581290:intron | 35.0% | |
| ACAGAAACCTTTACACCATT+AGG | + | chr4_1:86628456-86628475 | Msa0581290:CDS | 35.0% | |
| CAGAAACCTTTACACCATTA+GGG | + | chr4_1:86628457-86628476 | Msa0581290:CDS | 35.0% | |
| ! | ATCATTGTTGTTCTATCGTC+AGG | + | chr4_1:86628542-86628561 | Msa0581290:CDS | 35.0% |
| TGTTATACTAAATCAGGGGT+AGG | + | chr4_1:86628704-86628723 | Msa0581290:intron | 35.0% | |
| GTTATACTAAATCAGGGGTA+GGG | + | chr4_1:86628705-86628724 | Msa0581290:intron | 35.0% | |
| TATCATGTTCTCTCTCTGTA+TGG | + | chr4_1:86628779-86628798 | Msa0581290:intron | 35.0% | |
| CAATGAAGAGAATAACAAGG+GGG | - | chr4_1:86628820-86628839 | None:intergenic | 35.0% | |
| CACAATTAATGGCCAAGATT+TGG | - | chr4_1:86629414-86629433 | None:intergenic | 35.0% | |
| GAGTAGGAAATCTTATGGTA+GGG | - | chr4_1:86629993-86630012 | None:intergenic | 35.0% | |
| AGAAGGAGTAGGAAATCTTA+TGG | - | chr4_1:86629477-86629496 | None:intergenic | 35.0% | |
| !!! | ATTTTTCTGGAATGTGTCGT+TGG | - | chr4_1:86629925-86629944 | None:intergenic | 35.0% |
| AGGTGTTTGGTTGTTTATGA+AGG | + | chr4_1:86629971-86629990 | Msa0581290:intron | 35.0% | |
| TTGGTTGTTTATGAAGGAGT+AGG | + | chr4_1:86629977-86629996 | Msa0581290:intron | 35.0% | |
| TGAAGGAGTAGGAAATCTTA+TGG | + | chr4_1:86629988-86630007 | Msa0581290:intron | 35.0% | |
| GAGTAGGAAATCTTATGGTA+GGG | + | chr4_1:86629993-86630012 | Msa0581290:intron | 35.0% | |
| ATACTTACTCTTGGAGTCAA+TGG | + | chr4_1:86630085-86630104 | Msa0581290:intron | 35.0% | |
| ! | CTGTGTTTTATGTTAAGTCC+TGG | + | chr4_1:86630626-86630645 | Msa0581290:intron | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr4_1:86630653-86630672 | Msa0581290:intron | 35.0% | |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr4_1:86630658-86630677 | None:intergenic | 35.0% |
| CTTGTGTAAAAAACAGGGTA+AGG | + | chr4_1:86630658-86630677 | Msa0581290:intron | 35.0% | |
| ! | AAAACATTGCAGAGTGGTTT+TGG | - | chr4_1:86630838-86630857 | None:intergenic | 35.0% |
| !! | AAGCACTGATGCAAAAGAAA+AGG | - | chr4_1:86630863-86630882 | None:intergenic | 35.0% |
| TGCTAGGTATTTCAGAAATC+CGG | - | chr4_1:86630915-86630934 | None:intergenic | 35.0% | |
| !! | CACTTGTTTCTACTCTTGAT+CGG | + | chr4_1:86630933-86630952 | Msa0581290:intron | 35.0% |
| ! | ATAGAAATATAGCGGAGGAT+AGG | - | chr4_1:86631256-86631275 | None:intergenic | 35.0% |
| CCTCCACTATAGAAATATAG+CGG | - | chr4_1:86631264-86631283 | None:intergenic | 35.0% | |
| !! | CATGTTGCTTTATTGTAGCA+AGG | - | chr4_1:86631299-86631318 | None:intergenic | 35.0% |
| ! | GGCTTCTATGGTATTTTTCA+TGG | + | chr4_1:86631694-86631713 | Msa0581290:intron | 35.0% |
| GGAGAAATTTAACAACACAC+AGG | - | chr4_1:86631861-86631880 | None:intergenic | 35.0% | |
| GTTTGTTTAGTGTTTGCAAC+TGG | + | chr4_1:86632102-86632121 | Msa0581290:intron | 35.0% | |
| TTTGCAACTGGATCATGATA+GGG | + | chr4_1:86632114-86632133 | Msa0581290:intron | 35.0% | |
| !! | GATAACTAAGCTTTTAAGGG+AGG | + | chr4_1:86632228-86632247 | Msa0581290:intron | 35.0% |
| TGATAAGTATCCAAGCACTT+GGG | - | chr4_1:86632258-86632277 | None:intergenic | 35.0% | |
| TGGAATTATCATCTGCTAGA+AGG | - | chr4_1:86632432-86632451 | None:intergenic | 35.0% | |
| GGGACAAGCTATTTAACATT+TGG | - | chr4_1:86632452-86632471 | None:intergenic | 35.0% | |
| AGAATGAAAACGCTTACATG+CGG | + | chr4_1:86632492-86632511 | Msa0581290:intron | 35.0% | |
| AAGCATTAGAAAGGTTAGCA+GGG | - | chr4_1:86632548-86632567 | None:intergenic | 35.0% | |
| AAGTCAACCAAGCATTAGAA+AGG | - | chr4_1:86632557-86632576 | None:intergenic | 35.0% | |
| GAACACTTACACTTCCATTA+TGG | - | chr4_1:86632700-86632719 | None:intergenic | 35.0% | |
| GGATCGTTAACTTTATGTCT+TGG | - | chr4_1:86632740-86632759 | None:intergenic | 35.0% | |
| TAAAGTTAACGATCCTACTC+GGG | + | chr4_1:86632745-86632764 | Msa0581290:CDS | 35.0% | |
| ! | AGAGTTGTGAAGTTGTTTCA+CGG | - | chr4_1:86632820-86632839 | None:intergenic | 35.0% |
| !! | ATCAAGGTTAGTCTCTATAC+GGG | - | chr4_1:86632888-86632907 | None:intergenic | 35.0% |
| !! | GATCAAGGTTAGTCTCTATA+CGG | - | chr4_1:86632889-86632908 | None:intergenic | 35.0% |
| CTAACGTTCACAACATTAAC+AGG | - | chr4_1:86633025-86633044 | None:intergenic | 35.0% | |
| TTACTTAGATAGCCTAAACG+TGG | + | chr4_1:86633440-86633459 | Msa0581290:intron | 35.0% | |
| ACCATATTTCAACCACGTTT+AGG | - | chr4_1:86633455-86633474 | None:intergenic | 35.0% | |
| !!! | AAGGTCATTTTTTTGGTCCA+AGG | + | chr4_1:86633485-86633504 | Msa0581290:intron | 35.0% |
| !!! | TTTTTTGGTCCAAGGTATTG+TGG | + | chr4_1:86633493-86633512 | Msa0581290:intron | 35.0% |
| CTACTTTAGACCAAAAATGG+TGG | + | chr4_1:86633556-86633575 | Msa0581290:intron | 35.0% | |
| CTCAATTACAATGACTGTCA+TGG | + | chr4_1:86633722-86633741 | Msa0581290:intron | 35.0% | |
| !! | TCATGGAGCTTTGAAAAATC+CGG | + | chr4_1:86633739-86633758 | Msa0581290:intron | 35.0% |
| TGCTATAGATGGTAATACTC+CGG | - | chr4_1:86633761-86633780 | None:intergenic | 35.0% | |
| GCTAAATGAGATGCTATAGA+TGG | - | chr4_1:86633772-86633791 | None:intergenic | 35.0% | |
| GAATAATCTGATTGTCATGG+TGG | + | chr4_1:86633947-86633966 | Msa0581290:intron | 35.0% | |
| !! | ATCTCCTTTAGGTTCTAAAG+AGG | + | chr4_1:86634152-86634171 | Msa0581290:CDS | 35.0% |
| !! | CATACCTCTTTAGAACCTAA+AGG | - | chr4_1:86634159-86634178 | None:intergenic | 35.0% |
| ! | ATAACAAGTGTTTTTCCTGG+GGG | + | chr4_1:86634318-86634337 | Msa0581290:intron | 35.0% |
| TGACTGAACCAAAAGTTGAA+TGG | + | chr4_1:86634341-86634360 | Msa0581290:intron | 35.0% | |
| AGAATTGTGAGAATGGTTGA+GGG | + | chr4_1:86634775-86634794 | Msa0581290:intron | 35.0% | |
| ! | CGAAAGAGAATATTTTACGG+CGG | + | chr4_1:86634919-86634938 | Msa0581290:CDS | 35.0% |
| TTGCATCTGTCACAAGTTAT+AGG | + | chr4_1:86634976-86634995 | Msa0581290:intron | 35.0% | |
| TCAGCATATGTTGAGTCATA+CGG | - | chr4_1:86635107-86635126 | None:intergenic | 35.0% | |
| ! | AAGAGAAGTATGTAGTAGGA+AGG | - | chr4_1:86635264-86635283 | None:intergenic | 35.0% |
| TAGATCACTCACTTTCTATG+AGG | + | chr4_1:86635580-86635599 | Msa0581290:CDS | 35.0% | |
| AGATCACTCACTTTCTATGA+GGG | + | chr4_1:86635581-86635600 | Msa0581290:CDS | 35.0% | |
| TCATTCTACAACTTCGATCT+TGG | + | chr4_1:86635653-86635672 | Msa0581290:CDS | 35.0% | |
| TGGTTATTGTCAGGTACTAA+TGG | + | chr4_1:86635673-86635692 | Msa0581290:intron | 35.0% | |
| !! | ACAACTTGCTACTTGGAAAT+GGG | - | chr4_1:86635774-86635793 | None:intergenic | 35.0% |
| !! | TACAACTTGCTACTTGGAAA+TGG | - | chr4_1:86635775-86635794 | None:intergenic | 35.0% |
| !!! | AGGAAGTCTTTTGGTTTAGA+GGG | + | chr4_1:86636065-86636084 | Msa0581290:intron | 35.0% |
| !!! | TTTTGGTTTAGAGGGGAAAT+TGG | + | chr4_1:86636073-86636092 | Msa0581290:intron | 35.0% |
| ! | GAAAGTGCAGTTCTCAAATA+AGG | + | chr4_1:86636099-86636118 | Msa0581290:intron | 35.0% |
| ! | ATCAGAAGAGTCTGGAATAA+AGG | + | chr4_1:86636200-86636219 | Msa0581290:intron | 35.0% |
| TTTCCACTGTCTTTCTGAAT+CGG | + | chr4_1:86636225-86636244 | Msa0581290:intron | 35.0% | |
| ! | CCCTATTTTATATGCATGTG+TGG | + | chr4_1:86636313-86636332 | Msa0581290:intron | 35.0% |
| GTCTCCAATATTGTTTGTGA+TGG | + | chr4_1:86636588-86636607 | Msa0581290:CDS | 35.0% | |
| TCCAATATTGTTTGTGATGG+AGG | + | chr4_1:86636591-86636610 | Msa0581290:CDS | 35.0% | |
| TCCTCCATCACAAACAATAT+TGG | - | chr4_1:86636595-86636614 | None:intergenic | 35.0% | |
| ! | ACTGAAGAAAAGTGTAAAGC+TGG | - | chr4_1:86636811-86636830 | None:intergenic | 35.0% |
| ! | AGCTTTACACTTTTCTTCAG+TGG | + | chr4_1:86636810-86636829 | Msa0581290:intron | 35.0% |
| TAGAACTCAACGAGTCTTAA+TGG | - | chr4_1:86637087-86637106 | None:intergenic | 35.0% | |
| GAAACAAAAAATGTCGTGTG+TGG | - | chr4_1:86637443-86637462 | None:intergenic | 35.0% | |
| TACTTCGATTGTATGTGTCA+TGG | + | chr4_1:86637592-86637611 | Msa0581290:intron | 35.0% | |
| ATATAGCATATATGGGGGAA+TGG | - | chr4_1:86637633-86637652 | None:intergenic | 35.0% | |
| AAAAGCAGTATATCTCGATG+TGG | - | chr4_1:86637673-86637692 | None:intergenic | 35.0% | |
| AAAGCAGATCAAATGGAGAT+TGG | - | chr4_1:86638027-86638046 | None:intergenic | 35.0% | |
| !! | TTGATCTGCTTTGAGAAAAC+TGG | + | chr4_1:86638035-86638054 | Msa0581290:intron | 35.0% |
| !! | TGATCTGCTTTGAGAAAACT+GGG | + | chr4_1:86638036-86638055 | Msa0581290:intron | 35.0% |
| AATGTATCTCTGAACCTTTG+AGG | + | chr4_1:86638063-86638082 | Msa0581290:intron | 35.0% | |
| ATCCTTCAGAGATATATTGG+GGG | - | chr4_1:86638177-86638196 | None:intergenic | 35.0% | |
| CTGTGCTAGAATATCATTTC+GGG | + | chr4_1:86638198-86638217 | Msa0581290:intron | 35.0% | |
| !!! | CATATTTTTGGCATTTTGGG+GGG | - | chr4_1:86638312-86638331 | None:intergenic | 35.0% |
| CCCAAAATGCCAAAAATATG+AGG | + | chr4_1:86638312-86638331 | Msa0581290:intron | 35.0% | |
| !!! | GCCTCATATTTTTGGCATTT+TGG | - | chr4_1:86638316-86638335 | None:intergenic | 35.0% |
| CGATGCCGTAGTAAAATAAT+TGG | + | chr4_1:86638574-86638593 | Msa0581290:CDS | 35.0% | |
| !! | GCTCCCCAATTATTTTACTA+CGG | - | chr4_1:86638582-86638601 | None:intergenic | 35.0% |
| TAAAACGAACCATCATCAAC+AGG | - | chr4_1:86638754-86638773 | None:intergenic | 35.0% | |
| ACAACACTTCATCATCTTGT+TGG | - | chr4_1:86638780-86638799 | None:intergenic | 35.0% | |
| CCACTAATAGCAAACTGAGT+TGG | - | chr4_1:86628169-86628188 | None:intergenic | 40.0% | |
| !! | CCAACTCAGTTTGCTATTAG+TGG | + | chr4_1:86628166-86628185 | Msa0581290:CDS | 40.0% |
| CAGACTTGGATACCTTACAA+AGG | + | chr4_1:86628311-86628330 | Msa0581290:intron | 40.0% | |
| AAACCTTTACACCATTAGGG+CGG | + | chr4_1:86628460-86628479 | Msa0581290:CDS | 40.0% | |
| ATTGACCTGACATCCGTAAA+CGG | - | chr4_1:86628488-86628507 | None:intergenic | 40.0% | |
| ATATATTGCCATCCAAGAGC+AGG | - | chr4_1:86628524-86628543 | None:intergenic | 40.0% | |
| AAGTGAAATACTACCTTGGG+TGG | + | chr4_1:86628754-86628773 | Msa0581290:intron | 40.0% | |
| AGAACATGATAATCCACCCA+AGG | - | chr4_1:86628770-86628789 | None:intergenic | 40.0% | |
| ATGTTCTCTCTCTGTATGGT+AGG | + | chr4_1:86628783-86628802 | Msa0581290:intron | 40.0% | |
| ! | TGTTAACCTTTGGTTTCCAG+GGG | - | chr4_1:86628869-86628888 | None:intergenic | 40.0% |
| ! | GTGTTAACCTTTGGTTTCCA+GGG | - | chr4_1:86628870-86628889 | None:intergenic | 40.0% |
| GCGTTAGAATCTAATTCCCA+TGG | + | chr4_1:86628912-86628931 | Msa0581290:intron | 40.0% | |
| CAAATGCACCCTAAATCCAT+GGG | - | chr4_1:86628931-86628950 | None:intergenic | 40.0% | |
| TCAAATGCACCCTAAATCCA+TGG | - | chr4_1:86628932-86628951 | None:intergenic | 40.0% | |
| AGCTCCCTTAATAAGCAAGT+TGG | + | chr4_1:86629132-86629151 | Msa0581290:intron | 40.0% | |
| AGAGAGAGCCAATACATACT+TGG | - | chr4_1:86629254-86629273 | None:intergenic | 40.0% | |
| ATACTTACTCTCGGAGTCAA+TGG | - | chr4_1:86629380-86629399 | None:intergenic | 40.0% | |
| GGAGTAGGAAATCTTATGGT+AGG | - | chr4_1:86629992-86630011 | None:intergenic | 40.0% | |
| CAAAAGCAACGATGATACAC+AGG | + | chr4_1:86629509-86629528 | Msa0581290:intron | 40.0% | |
| GGAGTAGGAAATCTTATGGT+AGG | + | chr4_1:86629992-86630011 | Msa0581290:intron | 40.0% | |
| TTGTACTAAATAGCGTGTCG+CGG | - | chr4_1:86630255-86630274 | None:intergenic | 40.0% | |
| GATGGACAACACTGTGAAAA+AGG | + | chr4_1:86630350-86630369 | Msa0581290:intron | 40.0% | |
| TTATGTGATGCATGGATGCA+AGG | + | chr4_1:86630429-86630448 | Msa0581290:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | chr4_1:86630652-86630671 | Msa0581290:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr4_1:86630684-86630703 | Msa0581290:intron | 40.0% | |
| ATAAATCACTAAGGGCAACC+CGG | - | chr4_1:86630750-86630769 | None:intergenic | 40.0% | |
| AAGGCAAAAACATTGCAGAG+TGG | - | chr4_1:86630844-86630863 | None:intergenic | 40.0% | |
| AACCAATAACTTCCAGTTGC+CGG | + | chr4_1:86630893-86630912 | Msa0581290:intron | 40.0% | |
| TATTTCAGAAATCCGGCAAC+TGG | - | chr4_1:86630908-86630927 | None:intergenic | 40.0% | |
| CAAGAGTAGAAACAAGTGCT+AGG | - | chr4_1:86630931-86630950 | None:intergenic | 40.0% | |
| CCACTATAGAAATATAGCGG+AGG | - | chr4_1:86631261-86631280 | None:intergenic | 40.0% | |
| ! | CCTCCGCTATATTTCTATAG+TGG | + | chr4_1:86631258-86631277 | Msa0581290:CDS | 40.0% |
| ! | CCGCTATATTTCTATAGTGG+AGG | + | chr4_1:86631261-86631280 | Msa0581290:CDS | 40.0% |
| AGCAACATGTTCTTCTTGTG+AGG | + | chr4_1:86631310-86631329 | Msa0581290:CDS | 40.0% | |
| ! | TGGGAATTGAGAAAGCATGT+GGG | + | chr4_1:86631424-86631443 | Msa0581290:intron | 40.0% |
| GTACGACAAGTTCCTTTACA+AGG | + | chr4_1:86631767-86631786 | Msa0581290:intron | 40.0% | |
| ACAAGTTCCTTTACAAGGAC+AGG | + | chr4_1:86631772-86631791 | Msa0581290:intron | 40.0% | |
| GAAAATGCCTGTCCTTGTAA+AGG | - | chr4_1:86631782-86631801 | None:intergenic | 40.0% | |
| AAGCTACTCAAGAGTCATGA+TGG | - | chr4_1:86631937-86631956 | None:intergenic | 40.0% | |
| ! | TGATTTTCAGAGTACACTGC+AGG | + | chr4_1:86632053-86632072 | Msa0581290:CDS | 40.0% |
| GTTTGCAACTGGATCATGAT+AGG | + | chr4_1:86632113-86632132 | Msa0581290:intron | 40.0% | |
| TGATAGGGACTTGGGTATTA+TGG | + | chr4_1:86632129-86632148 | Msa0581290:intron | 40.0% | |
| GATAGGGACTTGGGTATTAT+GGG | + | chr4_1:86632130-86632149 | Msa0581290:intron | 40.0% | |
| ATAGGGACTTGGGTATTATG+GGG | + | chr4_1:86632131-86632150 | Msa0581290:intron | 40.0% | |
| GATAAGTATCCAAGCACTTG+GGG | - | chr4_1:86632257-86632276 | None:intergenic | 40.0% | |
| CTGATAAGTATCCAAGCACT+TGG | - | chr4_1:86632259-86632278 | None:intergenic | 40.0% | |
| CAAGCATTAGAAAGGTTAGC+AGG | - | chr4_1:86632549-86632568 | None:intergenic | 40.0% | |
| CTGCTAACCTTTCTAATGCT+TGG | + | chr4_1:86632547-86632566 | Msa0581290:intron | 40.0% | |
| ! | CCAAGGAAGACAAAGTTTTC+TGG | - | chr4_1:86632580-86632599 | None:intergenic | 40.0% |
| CCAGAAAACTTTGTCTTCCT+TGG | + | chr4_1:86632577-86632596 | Msa0581290:intron | 40.0% | |
| ! | CTCTTGGTTCTCATTCAAAG+TGG | - | chr4_1:86632660-86632679 | None:intergenic | 40.0% |
| CTTTGAATGAGAACCAAGAG+AGG | + | chr4_1:86632660-86632679 | Msa0581290:CDS | 40.0% | |
| TAAGTGTTCCTCAGTTCCAT+AGG | + | chr4_1:86632711-86632730 | Msa0581290:CDS | 40.0% | |
| CTTTATGTCTTGGTCTCCTA+TGG | - | chr4_1:86632730-86632749 | None:intergenic | 40.0% | |
| TCTCCAAAACCTGAATAGAG+AGG | - | chr4_1:86632772-86632791 | None:intergenic | 40.0% | |
| ! | GAGTTGTGAAGTTGTTTCAC+GGG | - | chr4_1:86632819-86632838 | None:intergenic | 40.0% |
| ! | AGAAACTTTTCCTGCAACAG+TGG | - | chr4_1:86632954-86632973 | None:intergenic | 40.0% |
| ATCTGCTTTCTCAGATTCTC+AGG | + | chr4_1:86632982-86633001 | Msa0581290:CDS | 40.0% | |
| ACTTCCAATGAACAGTTGAG+TGG | + | chr4_1:86633151-86633170 | Msa0581290:intron | 40.0% | |
| AATGCCACTCAACTGTTCAT+TGG | - | chr4_1:86633158-86633177 | None:intergenic | 40.0% | |
| ! | GCTAATCGCTGCCAAAATTT+TGG | - | chr4_1:86633414-86633433 | None:intergenic | 40.0% |
| GCCTAAACGTGGTTGAAATA+TGG | + | chr4_1:86633451-86633470 | Msa0581290:intron | 40.0% | |
| TCTGATTGTCATGGTGGTAA+TGG | + | chr4_1:86633953-86633972 | Msa0581290:intron | 40.0% | |
| !! | CATGGTGGTAATGGCATATT+TGG | + | chr4_1:86633962-86633981 | Msa0581290:intron | 40.0% |
| AATGGCATATTTGGCGTGTA+TGG | + | chr4_1:86633971-86633990 | Msa0581290:intron | 40.0% | |
| GTGTATGGTTATGCTTGGTT+TGG | + | chr4_1:86633986-86634005 | Msa0581290:intron | 40.0% | |
| TTGACAATTTGTCGCTAGTG+TGG | + | chr4_1:86634115-86634134 | Msa0581290:CDS | 40.0% | |
| TGACAATTTGTCGCTAGTGT+GGG | + | chr4_1:86634116-86634135 | Msa0581290:CDS | 40.0% | |
| TTACGTGCTACAGTTTCTCT+TGG | + | chr4_1:86634226-86634245 | Msa0581290:intron | 40.0% | |
| TACGTGCTACAGTTTCTCTT+GGG | + | chr4_1:86634227-86634246 | Msa0581290:intron | 40.0% | |
| GAGAATTGTGAGAATGGTTG+AGG | + | chr4_1:86634774-86634793 | Msa0581290:intron | 40.0% | |
| TTGGGCTTAATCATATGCAG+TGG | + | chr4_1:86634848-86634867 | Msa0581290:intron | 40.0% | |
| AAACCTCATTCCGTAATTCG+TGG | - | chr4_1:86634951-86634970 | None:intergenic | 40.0% | |
| TGAGAGAGAATTCCTGAAGT+CGG | + | chr4_1:86635124-86635143 | Msa0581290:CDS | 40.0% | |
| AGTAAATGAAAACCTGCCAC+TGG | - | chr4_1:86635181-86635200 | None:intergenic | 40.0% | |
| ! | CTTCATGTAGAGTATCTCCT+CGG | + | chr4_1:86635407-86635426 | Msa0581290:intron | 40.0% |
| AGGGCTTATTGAGAAAGATG+TGG | + | chr4_1:86635467-86635486 | Msa0581290:CDS | 40.0% | |
| TTGAGAAAGATGTGGTAAGC+TGG | + | chr4_1:86635475-86635494 | Msa0581290:intron | 40.0% | |
| GATCACTCACTTTCTATGAG+GGG | + | chr4_1:86635582-86635601 | Msa0581290:CDS | 40.0% | |
| ATCACTCACTTTCTATGAGG+GGG | + | chr4_1:86635583-86635602 | Msa0581290:CDS | 40.0% | |
| ATCCAAATGTCAACGTTCTG+CGG | + | chr4_1:86635612-86635631 | Msa0581290:CDS | 40.0% | |
| CTTCGATCTTGGTTATTGTC+AGG | + | chr4_1:86635664-86635683 | Msa0581290:CDS | 40.0% | |
| TTGTCAGGTACTAATGGTTC+TGG | + | chr4_1:86635679-86635698 | Msa0581290:intron | 40.0% | |
| TGTCAGGTACTAATGGTTCT+GGG | + | chr4_1:86635680-86635699 | Msa0581290:intron | 40.0% | |
| CTTCTCCTAGATTTCGTACA+TGG | - | chr4_1:86635885-86635904 | None:intergenic | 40.0% | |
| CATGTACGAAATCTAGGAGA+AGG | + | chr4_1:86635883-86635902 | Msa0581290:intron | 40.0% | |
| TACGAAATCTAGGAGAAGGT+TGG | + | chr4_1:86635887-86635906 | Msa0581290:intron | 40.0% | |
| ACATATCACGGGTCTATTGT+AGG | + | chr4_1:86635910-86635929 | Msa0581290:intron | 40.0% | |
| GAAGTGGTTGCAATGTGTTT+GGG | - | chr4_1:86635988-86636007 | None:intergenic | 40.0% | |
| TGAAGTGGTTGCAATGTGTT+TGG | - | chr4_1:86635989-86636008 | None:intergenic | 40.0% | |
| CTTCACAACAATGGTTGAAG+TGG | - | chr4_1:86636004-86636023 | None:intergenic | 40.0% | |
| AAAGGGAAGCTTCACAACAA+TGG | - | chr4_1:86636013-86636032 | None:intergenic | 40.0% | |
| !!! | GAGGAAGTCTTTTGGTTTAG+AGG | + | chr4_1:86636064-86636083 | Msa0581290:intron | 40.0% |
| !!! | GGAAGTCTTTTGGTTTAGAG+GGG | + | chr4_1:86636066-86636085 | Msa0581290:intron | 40.0% |
| GTAACTGTATCAGAAGAGTC+TGG | + | chr4_1:86636192-86636211 | Msa0581290:intron | 40.0% | |
| !! | ATACCGATTCAGAAAGACAG+TGG | - | chr4_1:86636231-86636250 | None:intergenic | 40.0% |
| TCACGAGCTCATGATATCTT+TGG | - | chr4_1:86636428-86636447 | None:intergenic | 40.0% | |
| !! | TTTTGTTGCATTGGCAGAAG+GGG | - | chr4_1:86636487-86636506 | None:intergenic | 40.0% |
| !! | GTTTTGTTGCATTGGCAGAA+GGG | - | chr4_1:86636488-86636507 | None:intergenic | 40.0% |
| !! | TGTTTTGTTGCATTGGCAGA+AGG | - | chr4_1:86636489-86636508 | None:intergenic | 40.0% |
| TTGAGGACCGTTTAAACAGA+TGG | + | chr4_1:86636516-86636535 | Msa0581290:intron | 40.0% | |
| GACCGTTTAAACAGATGGTT+AGG | + | chr4_1:86636521-86636540 | Msa0581290:intron | 40.0% | |
| !!! | AGGATGAATCAGAGGCATTT+TGG | + | chr4_1:86636611-86636630 | Msa0581290:CDS | 40.0% |
| !! | TTGGTGTTTTGTCTCTCTGA+TGG | + | chr4_1:86636630-86636649 | Msa0581290:CDS | 40.0% |
| AAAAGCAGCACCTCTTTGTA+AGG | - | chr4_1:86636981-86637000 | None:intergenic | 40.0% | |
| TCATGTTTGAATCCAACGTG+AGG | + | chr4_1:86637041-86637060 | Msa0581290:intron | 40.0% | |
| CATGTTTGAATCCAACGTGA+GGG | + | chr4_1:86637042-86637061 | Msa0581290:intron | 40.0% | |
| ATGTTTGAATCCAACGTGAG+GGG | + | chr4_1:86637043-86637062 | Msa0581290:intron | 40.0% | |
| TGAATATATTCCCCTCACGT+TGG | - | chr4_1:86637056-86637075 | None:intergenic | 40.0% | |
| TGAACATAACCCTCTCATGT+TGG | + | chr4_1:86637157-86637176 | Msa0581290:intron | 40.0% | |
| ! | GAAAAGAAAGCACAGTTGGA+TGG | - | chr4_1:86637286-86637305 | None:intergenic | 40.0% |
| TAATTCTGCACAGCAATCGA+TGG | - | chr4_1:86637319-86637338 | None:intergenic | 40.0% | |
| GTGGTGACTGATACATTGAA+AGG | - | chr4_1:86637424-86637443 | None:intergenic | 40.0% | |
| GTAATAGCCTTCTACATTGC+TGG | - | chr4_1:86637974-86637993 | None:intergenic | 40.0% | |
| TTCCCCCAATATATCTCTGA+AGG | + | chr4_1:86638172-86638191 | Msa0581290:intron | 40.0% | |
| AGACTGCAACACATACATAG+AGG | - | chr4_1:86638549-86638568 | None:intergenic | 40.0% | |
| TCGACCTTGATGCAACATTA+AGG | + | chr4_1:86638653-86638672 | Msa0581290:CDS | 40.0% | |
| CGACCTTGATGCAACATTAA+GGG | + | chr4_1:86638654-86638673 | Msa0581290:CDS | 40.0% | |
| CATCCCTTAATGTTGCATCA+AGG | - | chr4_1:86638660-86638679 | None:intergenic | 40.0% | |
| ATAGGTTACGGCAGAAATAC+TGG | - | chr4_1:86638970-86638989 | None:intergenic | 40.0% | |
| GATAGAGAGATGTGTCTTCG+AGG | - | chr4_1:86627759-86627778 | None:intergenic | 45.0% | |
| ! | GCAAGGGACTTCCTTGTTTA+TGG | + | chr4_1:86628207-86628226 | Msa0581290:CDS | 45.0% |
| ! | ACCTTACAAAGGGCATAACG+CGG | + | chr4_1:86628322-86628341 | Msa0581290:CDS | 45.0% |
| ! | AAAGGGCATAACGCGGATAA+TGG | + | chr4_1:86628329-86628348 | Msa0581290:CDS | 45.0% |
| TTACGGATGTCAGGTCAATC+AGG | + | chr4_1:86628489-86628508 | Msa0581290:CDS | 45.0% | |
| CAGGGGTAGGGATTTATATG+TGG | + | chr4_1:86628717-86628736 | Msa0581290:intron | 45.0% | |
| ! | GGTGTTAACCTTTGGTTTCC+AGG | - | chr4_1:86628871-86628890 | None:intergenic | 45.0% |
| GAGGCAGATTCATAGGTGTT+TGG | + | chr4_1:86629958-86629977 | Msa0581290:intron | 45.0% | |
| GCTATAGCACTGTTGTGTAG+TGG | + | chr4_1:86630294-86630313 | Msa0581290:intron | 45.0% | |
| CTATTTACTGCGATCCACGA+TGG | + | chr4_1:86630332-86630351 | Msa0581290:intron | 45.0% | |
| TTTCACAGTGTTGTCCATCG+TGG | - | chr4_1:86630349-86630368 | None:intergenic | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr4_1:86630647-86630666 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | + | chr4_1:86630680-86630699 | Msa0581290:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr4_1:86630683-86630702 | Msa0581290:intron | 45.0% | |
| !!! | CATTGCAGAGTGGTTTTGGT+AGG | - | chr4_1:86630834-86630853 | None:intergenic | 45.0% |
| ATCCGGCAACTGGAAGTTAT+TGG | - | chr4_1:86630898-86630917 | None:intergenic | 45.0% | |
| CACATGCTTTCTCAATTCCC+AGG | - | chr4_1:86631425-86631444 | None:intergenic | 45.0% | |
| ! | CTGGGAATTGAGAAAGCATG+TGG | + | chr4_1:86631423-86631442 | Msa0581290:intron | 45.0% |
| ! | GGGAATTGAGAAAGCATGTG+GGG | + | chr4_1:86631425-86631444 | Msa0581290:intron | 45.0% |
| GGGCAGTTACAGTTCAGAAA+GGG | + | chr4_1:86631445-86631464 | Msa0581290:intron | 45.0% | |
| GGCTAGACGTTATGATGTGA+TGG | - | chr4_1:86631571-86631590 | None:intergenic | 45.0% | |
| ACTGGATCATGATAGGGACT+TGG | + | chr4_1:86632120-86632139 | Msa0581290:intron | 45.0% | |
| CTGGATCATGATAGGGACTT+GGG | + | chr4_1:86632121-86632140 | Msa0581290:intron | 45.0% | |
| CATCACACACTACTCGTTGT+GGG | - | chr4_1:86632165-86632184 | None:intergenic | 45.0% | |
| AACGAGTAGTGTGTGATGCT+CGG | + | chr4_1:86632167-86632186 | Msa0581290:intron | 45.0% | |
| TCATCAGCTGACAGATCTGA+AGG | - | chr4_1:86632635-86632654 | None:intergenic | 45.0% | |
| AACCAAGAGAGGAATGACAG+TGG | + | chr4_1:86632671-86632690 | Msa0581290:CDS | 45.0% | |
| !! | GGACCTCTCTATTCAGGTTT+TGG | + | chr4_1:86632766-86632785 | Msa0581290:CDS | 45.0% |
| TATACGGGTTCTCCTCTCAT+TGG | - | chr4_1:86632873-86632892 | None:intergenic | 45.0% | |
| TTAGTCTGGGAAGACTTTGG+AGG | - | chr4_1:86632911-86632930 | None:intergenic | 45.0% | |
| !! | AGGTTAGTCTGGGAAGACTT+TGG | - | chr4_1:86632914-86632933 | None:intergenic | 45.0% |
| TGCTTTCTCAGATTCTCAGG+AGG | + | chr4_1:86632985-86633004 | Msa0581290:CDS | 45.0% | |
| GTGAACGTTAGCAAGCTTTC+AGG | + | chr4_1:86633034-86633053 | Msa0581290:intron | 45.0% | |
| AAAGTAGTAAAAGGGCAGCC+CGG | - | chr4_1:86633623-86633642 | None:intergenic | 45.0% | |
| ATCATGCACATGCTGCTAAC+TGG | - | chr4_1:86633794-86633813 | None:intergenic | 45.0% | |
| TTGGCGTGTATGGTTATGCT+TGG | + | chr4_1:86633981-86634000 | Msa0581290:intron | 45.0% | |
| GACAATTTGTCGCTAGTGTG+GGG | + | chr4_1:86634117-86634136 | Msa0581290:CDS | 45.0% | |
| TACTGCGCTATAAGCGATCA+TGG | + | chr4_1:86634716-86634735 | Msa0581290:intron | 45.0% | |
| TGACCACGAATTACGGAATG+AGG | + | chr4_1:86634945-86634964 | Msa0581290:CDS | 45.0% | |
| !! | TAGGTCTGGGGTTTGCTTTT+GGG | + | chr4_1:86635074-86635093 | Msa0581290:intron | 45.0% |
| !! | CTGACTTCTTTACCGACTTC+AGG | - | chr4_1:86635139-86635158 | None:intergenic | 45.0% |
| ACGAGACCATAAAGAACCAG+TGG | + | chr4_1:86635162-86635181 | Msa0581290:CDS | 45.0% | |
| !! | AACCTGCCACTGGTTCTTTA+TGG | - | chr4_1:86635171-86635190 | None:intergenic | 45.0% |
| TCCAAATGTCAACGTTCTGC+GGG | + | chr4_1:86635613-86635632 | Msa0581290:CDS | 45.0% | |
| CTCTGCCATGTACGAAATCT+AGG | + | chr4_1:86635877-86635896 | Msa0581290:intron | 45.0% | |
| GGAGAAGGTTGGACATATCA+CGG | + | chr4_1:86635898-86635917 | Msa0581290:intron | 45.0% | |
| GAGAAGGTTGGACATATCAC+GGG | + | chr4_1:86635899-86635918 | Msa0581290:intron | 45.0% | |
| TGTTGTGAAGCTTCCCTTTC+TGG | + | chr4_1:86636014-86636033 | Msa0581290:intron | 45.0% | |
| GGTTTAGAGGGGAAATTGGA+AGG | + | chr4_1:86636077-86636096 | Msa0581290:intron | 45.0% | |
| GTAGTCAGTGATGAGTGTCT+CGG | + | chr4_1:86636383-86636402 | Msa0581290:intron | 45.0% | |
| CATTGGCAGAAGGGGAAAAA+TGG | - | chr4_1:86636479-86636498 | None:intergenic | 45.0% | |
| ! | TGTGATGGAGGATGAATCAG+AGG | + | chr4_1:86636603-86636622 | Msa0581290:CDS | 45.0% |
| GTTACATCAGCATAGCCAGT+GGG | - | chr4_1:86637005-86637024 | None:intergenic | 45.0% | |
| AGTTACATCAGCATAGCCAG+TGG | - | chr4_1:86637006-86637025 | None:intergenic | 45.0% | |
| TGGGGCTCAATGAGTTTCAA+GGG | + | chr4_1:86637126-86637145 | Msa0581290:intron | 45.0% | |
| CACTATGCCAGCAATGTAGA+AGG | + | chr4_1:86637964-86637983 | Msa0581290:intron | 45.0% | |
| ! | GTGAGGACTGTTTTCCTCAA+AGG | - | chr4_1:86638080-86638099 | None:intergenic | 45.0% |
| AAACCATCTCTAGCAAGCAG+AGG | - | chr4_1:86638117-86638136 | None:intergenic | 45.0% | |
| !! | TTTTTGGCATTTTGGGGGGA+GGG | - | chr4_1:86638308-86638327 | None:intergenic | 45.0% |
| !!! | ATTTTTGGCATTTTGGGGGG+AGG | - | chr4_1:86638309-86638328 | None:intergenic | 45.0% |
| ACGAGAAAACAATGCGCTTG+TGG | + | chr4_1:86638485-86638504 | Msa0581290:CDS | 45.0% | |
| CGAGAAAACAATGCGCTTGT+GGG | + | chr4_1:86638486-86638505 | Msa0581290:CDS | 45.0% | |
| !! | TGCGCTTGTGGGAAGTATTA+TGG | + | chr4_1:86638497-86638516 | Msa0581290:CDS | 45.0% |
| ! | TAGAGGTGCAGATGTTCTGA+GGG | - | chr4_1:86638532-86638551 | None:intergenic | 45.0% |
| ! | ATAGAGGTGCAGATGTTCTG+AGG | - | chr4_1:86638533-86638552 | None:intergenic | 45.0% |
| TGCAACATTAAGGGATGCAG+AGG | + | chr4_1:86638663-86638682 | Msa0581290:CDS | 45.0% | |
| ! | TCTATCCATATGTGCTGGTG+AGG | + | chr4_1:86638687-86638706 | Msa0581290:CDS | 45.0% |
| !! | TATATATATATATATATATG+AGG | - | chr4_1:86630117-86630136 | None:intergenic | 5.0% |
| !!! | TTTGAAATATATTATTTAAA+AGG | - | chr4_1:86630582-86630601 | None:intergenic | 5.0% |
| !!! | AATTTAAAATATATTATATC+TGG | - | chr4_1:86637237-86637256 | None:intergenic | 5.0% |
| !!! | ATTTTAAATTAATTATTGTT+TGG | + | chr4_1:86637247-86637266 | Msa0581290:intron | 5.0% |
| TCCGCGTTATGCCCTTTGTA+AGG | - | chr4_1:86628326-86628345 | None:intergenic | 50.0% | |
| ! | CTTTGGTTTCCAGGGGAAAG+GGG | - | chr4_1:86628862-86628881 | None:intergenic | 50.0% |
| ! | CCTTTGGTTTCCAGGGGAAA+GGG | - | chr4_1:86628863-86628882 | None:intergenic | 50.0% |
| ! | ACCTTTGGTTTCCAGGGGAA+AGG | - | chr4_1:86628864-86628883 | None:intergenic | 50.0% |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr4_1:86629334-86629353 | Msa0581290:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGGA+GGG | + | chr4_1:86629352-86629371 | Msa0581290:intron | 50.0% | |
| GCTATAGCGCTATTGCACTG+TGG | + | chr4_1:86630206-86630225 | Msa0581290:intron | 50.0% | |
| GGGGCAGTTACAGTTCAGAA+AGG | + | chr4_1:86631444-86631463 | Msa0581290:intron | 50.0% | |
| ACACTACTCGTTGTGGGACT+TGG | - | chr4_1:86632159-86632178 | None:intergenic | 50.0% | |
| GCATCACACACTACTCGTTG+TGG | - | chr4_1:86632166-86632185 | None:intergenic | 50.0% | |
| ! | TAGTGTGTGATGCTCGGTGA+CGG | + | chr4_1:86632173-86632192 | Msa0581290:intron | 50.0% |
| !! | GGTGACGGTGAGTATTGAAG+TGG | + | chr4_1:86632188-86632207 | Msa0581290:intron | 50.0% |
| !! | CGGTGAGTATTGAAGTGGCT+TGG | + | chr4_1:86632193-86632212 | Msa0581290:intron | 50.0% |
| CACCACTGTCATTCCTCTCT+TGG | - | chr4_1:86632676-86632695 | None:intergenic | 50.0% | |
| CTTGGTCTCCTATGGAACTG+AGG | - | chr4_1:86632722-86632741 | None:intergenic | 50.0% | |
| TGAATAGAGAGGTCCCGAGT+AGG | - | chr4_1:86632761-86632780 | None:intergenic | 50.0% | |
| TACTCGGGACCTCTCTATTC+AGG | + | chr4_1:86632760-86632779 | Msa0581290:CDS | 50.0% | |
| ATGGATTCAGGGCCAATGAG+AGG | + | chr4_1:86632858-86632877 | Msa0581290:CDS | 50.0% | |
| ! | GGGAAGACTTTGGAGGATCA+AGG | - | chr4_1:86632904-86632923 | None:intergenic | 50.0% |
| !! | CGGAGGATCAAGGTTAGTCT+GGG | - | chr4_1:86632924-86632943 | None:intergenic | 50.0% |
| ! | TCGGAGGATCAAGGTTAGTC+TGG | - | chr4_1:86632925-86632944 | None:intergenic | 50.0% |
| TGGAAGACTTCGGAGGATCA+AGG | - | chr4_1:86632934-86632953 | None:intergenic | 50.0% | |
| CCTGCAACAGTGGAAGACTT+CGG | - | chr4_1:86632944-86632963 | None:intergenic | 50.0% | |
| CTGAAGGGTCCCTCATTATG+CGG | + | chr4_1:86633197-86633216 | Msa0581290:intron | 50.0% | |
| ! | GGAAGGGGTTCCACCATTTT+TGG | - | chr4_1:86633569-86633588 | None:intergenic | 50.0% |
| ! | AAAATGGTGGAACCCCTTCC+CGG | + | chr4_1:86633569-86633588 | Msa0581290:intron | 50.0% |
| AAACCGCGGCAATCTCCTTT+AGG | + | chr4_1:86634141-86634160 | Msa0581290:CDS | 50.0% | |
| GAACCTAAAGGAGATTGCCG+CGG | - | chr4_1:86634147-86634166 | None:intergenic | 50.0% | |
| GCGGACTTGACCACGAATTA+CGG | + | chr4_1:86634938-86634957 | Msa0581290:CDS | 50.0% | |
| !! | GTAGGTCTGGGGTTTGCTTT+TGG | + | chr4_1:86635073-86635092 | Msa0581290:intron | 50.0% |
| GACCATAAAGAACCAGTGGC+AGG | + | chr4_1:86635166-86635185 | Msa0581290:CDS | 50.0% | |
| TCCCGCAGAACGTTGACATT+TGG | - | chr4_1:86635617-86635636 | None:intergenic | 50.0% | |
| ! | GGAGGTCACAAGTTGAGTCA+TGG | - | chr4_1:86635967-86635986 | None:intergenic | 50.0% |
| GTGGTTGCAATGTGTTTGGG+AGG | - | chr4_1:86635985-86636004 | None:intergenic | 50.0% | |
| GTCTCTCTGATGGAACGTCT+TGG | + | chr4_1:86636640-86636659 | Msa0581290:CDS | 50.0% | |
| CGTGTGTATGCAGCTTGTCA+GGG | - | chr4_1:86636746-86636765 | None:intergenic | 50.0% | |
| ACGTGTGTATGCAGCTTGTC+AGG | - | chr4_1:86636747-86636766 | None:intergenic | 50.0% | |
| GTGGGGCTCAATGAGTTTCA+AGG | + | chr4_1:86637125-86637144 | Msa0581290:intron | 50.0% | |
| GAGCAATCTGTAGCAGAAGC+TGG | + | chr4_1:86637563-86637582 | Msa0581290:intron | 50.0% | |
| !! | GTTGCAGTTGGTGGAGCTAT+TGG | + | chr4_1:86637727-86637746 | Msa0581290:intron | 50.0% |
| ! | TCTCCTCTGCTTGCTAGAGA+TGG | + | chr4_1:86638111-86638130 | Msa0581290:intron | 50.0% |
| GAGGCTCTATCCATATGTGC+TGG | + | chr4_1:86638682-86638701 | Msa0581290:CDS | 50.0% | |
| ! | TCCATATGTGCTGGTGAGGA+AGG | + | chr4_1:86638691-86638710 | Msa0581290:CDS | 50.0% |
| ACCTTCCTCACCAGCACATA+TGG | - | chr4_1:86638695-86638714 | None:intergenic | 50.0% | |
| TCATCAACAGGCAACGATGG+TGG | - | chr4_1:86638742-86638761 | None:intergenic | 50.0% | |
| CCATCATCAACAGGCAACGA+TGG | - | chr4_1:86638745-86638764 | None:intergenic | 50.0% | |
| ! | CCATCGTTGCCTGTTGATGA+TGG | + | chr4_1:86638742-86638761 | Msa0581290:CDS | 50.0% |
| GGTTACGGCAGAAATACTGG+CGG | - | chr4_1:86638967-86638986 | None:intergenic | 50.0% | |
| GGAGAGAAAGAACGCGCGTT+TGG | - | chr4_1:86627706-86627725 | None:intergenic | 55.0% | |
| GAGATGTGTCTTCGAGGCGA+AGG | - | chr4_1:86627753-86627772 | None:intergenic | 55.0% | |
| AGCAGCGTAATCGCTGTCGT+CGG | - | chr4_1:86627863-86627882 | None:intergenic | 55.0% | |
| GCACCGCCCTAATGGTGTAA+AGG | - | chr4_1:86628466-86628485 | None:intergenic | 55.0% | |
| !! | CATTAGGGCGGTGCCGTTTA+CGG | + | chr4_1:86628472-86628491 | Msa0581290:CDS | 55.0% |
| CGGATGTCAGGTCAATCAGG+AGG | + | chr4_1:86628492-86628511 | Msa0581290:CDS | 55.0% | |
| ! | AGGAGGCATACTCCTGCTCT+TGG | + | chr4_1:86628509-86628528 | Msa0581290:CDS | 55.0% |
| GGCATACTCCTGCTCTTGGA+TGG | + | chr4_1:86628513-86628532 | Msa0581290:CDS | 55.0% | |
| CCCTTTCCCCTGGAAACCAA+AGG | + | chr4_1:86628860-86628879 | Msa0581290:intron | 55.0% | |
| GAGAGAGAGAGAGAGAGAGG+AGG | + | chr4_1:86629351-86629370 | Msa0581290:intron | 55.0% | |
| AGCGTGTCGCGGAACAATAG+AGG | - | chr4_1:86630244-86630263 | None:intergenic | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr4_1:86630723-86630742 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr4_1:86630724-86630743 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr4_1:86630728-86630747 | Msa0581290:intron | 55.0% |
| TGTCTTCCTTGGAACTGCCC+AGG | + | chr4_1:86632588-86632607 | Msa0581290:CDS | 55.0% | |
| GTCTTCCTTGGAACTGCCCA+GGG | + | chr4_1:86632589-86632608 | Msa0581290:CDS | 55.0% | |
| TCTGAAGGTCCACGTGCAAG+AGG | - | chr4_1:86632620-86632639 | None:intergenic | 55.0% | |
| GCAACAGTGGAAGACTTCGG+AGG | - | chr4_1:86632941-86632960 | None:intergenic | 55.0% | |
| CCGAAGTCTTCCACTGTTGC+AGG | + | chr4_1:86632941-86632960 | Msa0581290:CDS | 55.0% | |
| CCAAAGCTCCCACATACGCA+GGG | - | chr4_1:86633596-86633615 | None:intergenic | 55.0% | |
| ACCAAAGCTCCCACATACGC+AGG | - | chr4_1:86633597-86633616 | None:intergenic | 55.0% | |
| ! | ATGTGGGAGCTTTGGTGCAC+CGG | + | chr4_1:86633601-86633620 | Msa0581290:intron | 55.0% |
| TGTGTGGTCCACATGTTCCC+TGG | + | chr4_1:86633889-86633908 | Msa0581290:intron | 55.0% | |
| AGATGCCACCAGGGAACATG+TGG | - | chr4_1:86633900-86633919 | None:intergenic | 55.0% | |
| ! | CGTATCGACAGATGCCACCA+GGG | - | chr4_1:86633909-86633928 | None:intergenic | 55.0% |
| !!! | CTTTTGGTTCAGTCACCCCC+AGG | - | chr4_1:86634336-86634355 | None:intergenic | 55.0% |
| ! | GTAGAGTATCTCCTCGGCTC+AGG | + | chr4_1:86635413-86635432 | Msa0581290:intron | 55.0% |
| GAATCGTTTAGCCTGAGCCG+AGG | - | chr4_1:86635427-86635446 | None:intergenic | 55.0% | |
| GTCAGTGATGAGTGTCTCGG+TGG | + | chr4_1:86636386-86636405 | Msa0581290:intron | 55.0% | |
| !!! | GAGGTGCTGCTTTTTCCCAC+TGG | + | chr4_1:86636987-86637006 | Msa0581290:intron | 55.0% |
| !! | AGGCAACGATGGTGGAGTAC+CGG | - | chr4_1:86638734-86638753 | None:intergenic | 55.0% |
| TACGGCAGAAATACTGGCGG+CGG | - | chr4_1:86638964-86638983 | None:intergenic | 55.0% | |
| CGTAATCGCTGTCGTCGGAG+AGG | - | chr4_1:86627858-86627877 | None:intergenic | 60.0% | |
| CGTAAACGGCACCGCCCTAA+TGG | - | chr4_1:86628474-86628493 | None:intergenic | 60.0% | |
| !! | CGGTGCCGTTTACGGATGTC+AGG | + | chr4_1:86628480-86628499 | Msa0581290:CDS | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr4_1:86630696-86630715 | Msa0581290:intron | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr4_1:86630729-86630748 | Msa0581290:intron | 60.0% |
| AACAGCCCTGGGCAGTTCCA+AGG | - | chr4_1:86632597-86632616 | None:intergenic | 60.0% | |
| CGTGCAAGAGGAACAGCCCT+GGG | - | chr4_1:86632608-86632627 | None:intergenic | 60.0% | |
| ACGTGCAAGAGGAACAGCCC+TGG | - | chr4_1:86632609-86632628 | None:intergenic | 60.0% | |
| AGGGCTGTTCCTCTTGCACG+TGG | + | chr4_1:86632608-86632627 | Msa0581290:CDS | 60.0% | |
| ACATACGCAGGGTCCGGGAA+GGG | - | chr4_1:86633585-86633604 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCGTATGT+GGG | + | chr4_1:86633585-86633604 | Msa0581290:intron | 60.0% | |
| CCCTGCGTATGTGGGAGCTT+TGG | + | chr4_1:86633593-86633612 | Msa0581290:intron | 60.0% | |
| ! | TGTGGGAGCTTTGGTGCACC+GGG | + | chr4_1:86633602-86633621 | Msa0581290:intron | 60.0% |
| GTGGTCCACATGTTCCCTGG+TGG | + | chr4_1:86633892-86633911 | Msa0581290:intron | 60.0% | |
| ! | GCGTATCGACAGATGCCACC+AGG | - | chr4_1:86633910-86633929 | None:intergenic | 60.0% |
| CGCTAGTGTGGGGAAAACCG+CGG | + | chr4_1:86634127-86634146 | Msa0581290:CDS | 60.0% | |
| !! | TTGGCATTTTGGGGGGAGGG+AGG | - | chr4_1:86638305-86638324 | None:intergenic | 60.0% |
| !! | TGGAGTACCGGGTGGGATAC+GGG | - | chr4_1:86638722-86638741 | None:intergenic | 60.0% |
| !! | GTGGAGTACCGGGTGGGATA+CGG | - | chr4_1:86638723-86638742 | None:intergenic | 60.0% |
| !! | ACGATGGTGGAGTACCGGGT+GGG | - | chr4_1:86638729-86638748 | None:intergenic | 60.0% |
| !! | AACGATGGTGGAGTACCGGG+TGG | - | chr4_1:86638730-86638749 | None:intergenic | 60.0% |
| !! | GGCAACGATGGTGGAGTACC+GGG | - | chr4_1:86638733-86638752 | None:intergenic | 60.0% |
| CCAGGGGAAAGGGGCCCTAT+AGG | - | chr4_1:86628853-86628872 | None:intergenic | 65.0% | |
| CCTATAGGGCCCCTTTCCCC+TGG | + | chr4_1:86628850-86628869 | Msa0581290:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr4_1:86630698-86630717 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr4_1:86630711-86630730 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr4_1:86630712-86630731 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr4_1:86630711-86630730 | Msa0581290:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr4_1:86630712-86630731 | Msa0581290:intron | 65.0% | |
| GGGAGGGTTCCCCAAGTGCT+TGG | + | chr4_1:86632245-86632264 | Msa0581290:intron | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr4_1:86630711-86630730 | None:intergenic | 65.0% | |
| CACATACGCAGGGTCCGGGA+AGG | - | chr4_1:86633586-86633605 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+TGG | + | chr4_1:86630711-86630730 | Msa0581290:intron | 65.0% | |
| CTCCCACATACGCAGGGTCC+GGG | - | chr4_1:86633590-86633609 | None:intergenic | 65.0% | |
| GCTCCCACATACGCAGGGTC+CGG | - | chr4_1:86633591-86633610 | None:intergenic | 65.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr4_1:86630713-86630732 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr4_1:86630717-86630736 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr4_1:86630718-86630737 | None:intergenic | 70.0% | |
| GGTGCAGCCCGTATCCCACC+CGG | + | chr4_1:86638712-86638731 | Msa0581290:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 86627697 | 86639015 | 86627697 | ID=Msa0581290;Name=Msa0581290 |
| chr4_1 | mRNA | 86627697 | 86639015 | 86627697 | ID=Msa0581290-mRNA-1;Parent=Msa0581290;Name=Msa0581290-mRNA-1;_AED=0.10;_eAED=0.10;_QI=135|0.92|0.93|1|1|1|15|214|677 |
| chr4_1 | exon | 86627697 | 86627897 | 86627697 | ID=Msa0581290-mRNA-1:exon:32054;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86628058 | 86628228 | 86628058 | ID=Msa0581290-mRNA-1:exon:32055;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86628314 | 86628365 | 86628314 | ID=Msa0581290-mRNA-1:exon:32056;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86628456 | 86628563 | 86628456 | ID=Msa0581290-mRNA-1:exon:32057;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86631247 | 86631331 | 86631247 | ID=Msa0581290-mRNA-1:exon:32058;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86632020 | 86632074 | 86632020 | ID=Msa0581290-mRNA-1:exon:32059;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86632581 | 86633039 | 86632581 | ID=Msa0581290-mRNA-1:exon:32060;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86634114 | 86634173 | 86634114 | ID=Msa0581290-mRNA-1:exon:32061;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86634868 | 86634966 | 86634868 | ID=Msa0581290-mRNA-1:exon:32062;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86635077 | 86635187 | 86635077 | ID=Msa0581290-mRNA-1:exon:32063;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86635417 | 86635488 | 86635417 | ID=Msa0581290-mRNA-1:exon:32064;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86635569 | 86635685 | 86635569 | ID=Msa0581290-mRNA-1:exon:32065;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86636571 | 86636720 | 86636571 | ID=Msa0581290-mRNA-1:exon:32066;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86637734 | 86637834 | 86637734 | ID=Msa0581290-mRNA-1:exon:32067;Parent=Msa0581290-mRNA-1 |
| chr4_1 | exon | 86638474 | 86639015 | 86638474 | ID=Msa0581290-mRNA-1:exon:32068;Parent=Msa0581290-mRNA-1 |
| chr4_1 | five_prime_UTR | 86627697 | 86627831 | 86627697 | ID=Msa0581290-mRNA-1:five_prime_utr;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86627832 | 86627897 | 86627832 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86628058 | 86628228 | 86628058 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86628314 | 86628365 | 86628314 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86628456 | 86628563 | 86628456 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86631247 | 86631331 | 86631247 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86632020 | 86632074 | 86632020 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86632581 | 86633039 | 86632581 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86634114 | 86634173 | 86634114 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86634868 | 86634966 | 86634868 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86635077 | 86635187 | 86635077 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86635417 | 86635488 | 86635417 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86635569 | 86635685 | 86635569 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86636571 | 86636720 | 86636571 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86637734 | 86637834 | 86637734 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | CDS | 86638474 | 86638801 | 86638474 | ID=Msa0581290-mRNA-1:cds;Parent=Msa0581290-mRNA-1 |
| chr4_1 | three_prime_UTR | 86638802 | 86639015 | 86638802 | ID=Msa0581290-mRNA-1:three_prime_utr;Parent=Msa0581290-mRNA-1 |
| Gene Sequence |
| Protein sequence |