Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581430 | XP_003610159.1 | 90.690 | 580 | 36 | 3 | 1 | 566 | 1 | 576 | 0.0 | 1034 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581430 | sp|Q96C11|FGGY_HUMAN | 45.961 | 557 | 272 | 7 | 14 | 561 | 12 | 548 | 1.42e-164 | 482 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581430 | G7JD18 | 90.690 | 580 | 36 | 3 | 1 | 566 | 1 | 576 | 0.0 | 1034 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0581430 | Msa1221360 | 0.889107 | 3.255074e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581430 | MtrunA17_Chr4g0072731 | 90.690 | 580 | 36 | 3 | 1 | 566 | 1 | 576 | 0.0 | 1034 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581430 | AT4G30310.2 | 73.822 | 573 | 136 | 4 | 7 | 566 | 8 | 579 | 0.0 | 879 |
| Msa0581430 | AT4G30310.1 | 71.926 | 488 | 117 | 4 | 7 | 483 | 8 | 486 | 0.0 | 728 |
| Msa0581430 | AT4G30310.4 | 73.160 | 462 | 110 | 4 | 118 | 566 | 1 | 461 | 0.0 | 706 |
| Msa0581430 | AT4G30310.3 | 72.609 | 460 | 106 | 4 | 118 | 566 | 1 | 451 | 0.0 | 699 |
Find 176 sgRNAs with CRISPR-Local
Find 558 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTTGGTGGTTGCATTTC+TGG | 0.088084 | 4_1:-86800541 | None:intergenic |
| GCTCTTGGGTGCTGCTATTC+TGG | 0.108620 | 4_1:+86805800 | Msa0581430:CDS |
| CCTGGCCATCCTTTGGGTTC+TGG | 0.174434 | 4_1:+86802348 | Msa0581430:CDS |
| CAGGAACATGCTGATATTAT+TGG | 0.193681 | 4_1:+86804607 | Msa0581430:CDS |
| GCCACGGAATATCTTGTATT+TGG | 0.194882 | 4_1:-86806626 | None:intergenic |
| ATCTAACTTTCCAGCTTCTA+TGG | 0.200690 | 4_1:+86801103 | Msa0581430:intron |
| CGCTTTCCCTGGCCATCCTT+TGG | 0.231526 | 4_1:+86802341 | Msa0581430:CDS |
| GAGCAGAACCAAACCTTTAT+AGG | 0.233071 | 4_1:+86803937 | Msa0581430:CDS |
| AATTGTTCATTCCTGGGATT+TGG | 0.236868 | 4_1:+86802874 | Msa0581430:CDS |
| CTTTCCCTTGGAAGAATTAC+AGG | 0.242464 | 4_1:-86805768 | None:intergenic |
| ATTGTTCATTCCTGGGATTT+GGG | 0.242505 | 4_1:+86802875 | Msa0581430:CDS |
| TTTGCACCACAGTTTGTAAA+TGG | 0.263446 | 4_1:+86801318 | Msa0581430:CDS |
| CAGCAATGGTACCAGAATAT+TGG | 0.292707 | 4_1:+86803658 | Msa0581430:intron |
| GAGTGCTACTGGTGCATTAT+TGG | 0.296050 | 4_1:+86803698 | Msa0581430:CDS |
| AGCTGCATTCAGGGCTTTCA+TGG | 0.304897 | 4_1:-86805862 | None:intergenic |
| CATGTTCTTCCTGACTTTCA+TGG | 0.316014 | 4_1:+86803979 | Msa0581430:CDS |
| TGGTCGTGTGATTAGTAAAT+TGG | 0.320215 | 4_1:+86806924 | Msa0581430:three_prime_UTR |
| TTCCGACAGCTCACCTGTTT+CGG | 0.328398 | 4_1:+86800393 | Msa0581430:CDS |
| CGGAGCAAATTGTTCATTCC+TGG | 0.329096 | 4_1:+86802867 | Msa0581430:CDS |
| AAGAAAATTTGCAAGAATCT+TGG | 0.330498 | 4_1:+86801130 | Msa0581430:CDS |
| TTCAGTCAGGGCGCCTATAA+AGG | 0.331186 | 4_1:-86803950 | None:intergenic |
| CTCTTGGGTGCTGCTATTCT+GGG | 0.338717 | 4_1:+86805801 | Msa0581430:CDS |
| GCTTTCCCTGGCCATCCTTT+GGG | 0.344709 | 4_1:+86802342 | Msa0581430:CDS |
| ACACCTGACCAGCTGCATTC+AGG | 0.348731 | 4_1:-86805872 | None:intergenic |
| TGTAGATAGGGTTCTTTGAT+AGG | 0.353694 | 4_1:-86804582 | None:intergenic |
| CAAGAAGAAATGTGATAGTA+TGG | 0.357580 | 4_1:+86800434 | Msa0581430:CDS |
| CAAAGAAATATAATAGCCTT+AGG | 0.362518 | 4_1:+86805835 | Msa0581430:CDS |
| GCTCACCTGTTTCGGTTTCT+CGG | 0.363236 | 4_1:+86800401 | Msa0581430:CDS |
| AAATCAAAAGGAGTTATCTA+TGG | 0.364935 | 4_1:+86804108 | Msa0581430:CDS |
| AGCAATCTTCTACAGATATA+TGG | 0.367313 | 4_1:+86800170 | Msa0581430:intron |
| GATGCTCATGCTGGTGGCGT+GGG | 0.370406 | 4_1:+86802646 | Msa0581430:CDS |
| CATAACCTTGAAAATCAATA+TGG | 0.372762 | 4_1:-86806819 | None:intergenic |
| TGGACCAGCGCGAGCGCTGC+CGG | 0.374993 | 4_1:-86799864 | None:intergenic |
| TGATACAGATTCCCGAGATA+TGG | 0.379808 | 4_1:+86801376 | Msa0581430:CDS |
| GCATGTTCCTGAATGTAGAT+AGG | 0.380329 | 4_1:-86804595 | None:intergenic |
| TACAAGTAAATCACCTGTAT+TGG | 0.383130 | 4_1:+86800495 | Msa0581430:CDS |
| CACCTGACCAGCTGCATTCA+GGG | 0.386795 | 4_1:-86805871 | None:intergenic |
| TAGAGAGCTGTTGTTCATAA+AGG | 0.387938 | 4_1:-86806648 | None:intergenic |
| CAGGAACTGGGTCTTGTGCC+AGG | 0.395078 | 4_1:+86802598 | Msa0581430:intron |
| GTTTGTAAATGGACATATCT+TGG | 0.395154 | 4_1:+86801329 | Msa0581430:CDS |
| CTGCTAAGTATGTGACAAAA+TGG | 0.396939 | 4_1:-86806883 | None:intergenic |
| TGAGTGACTGGTTGTCATAC+AGG | 0.406255 | 4_1:+86801178 | Msa0581430:CDS |
| GATGTCCCAACAGGAATTCC+TGG | 0.413797 | 4_1:-86802616 | None:intergenic |
| TGAGCTTCTGAACAAGCTCT+TGG | 0.422616 | 4_1:+86803900 | Msa0581430:CDS |
| GAACATGTAAATCTTCAGTC+AGG | 0.427767 | 4_1:-86803963 | None:intergenic |
| CTAGCAGCCCGATACAGATA+TGG | 0.427837 | 4_1:+86800004 | Msa0581430:CDS |
| TTTGCAAGAATCTTGGTCAA+TGG | 0.433970 | 4_1:+86801137 | Msa0581430:CDS |
| TGGTACTTCTACATGTCATA+TGG | 0.435110 | 4_1:+86802836 | Msa0581430:CDS |
| TTCCTGACTTTCATGGGAAT+AGG | 0.435627 | 4_1:+86803986 | Msa0581430:CDS |
| GATGAGGAAGGAAAGCTTCT+CGG | 0.436211 | 4_1:+86799976 | Msa0581430:CDS |
| AACTTTCAACTGCAATTAGA+TGG | 0.437644 | 4_1:+86806735 | Msa0581430:three_prime_UTR |
| CCATCTTTCCATATCTGTAT+CGG | 0.442697 | 4_1:-86800012 | None:intergenic |
| ACCTACAGAAGTACAGAGTC+TGG | 0.443527 | 4_1:+86800243 | Msa0581430:CDS |
| CCAGAACCCAAAGGATGGCC+AGG | 0.443578 | 4_1:-86802348 | None:intergenic |
| GGCACCGGCAGCGCTCGCGC+TGG | 0.448012 | 4_1:+86799860 | Msa0581430:CDS |
| ACCCACAAGCTTCCATATCT+CGG | 0.448292 | 4_1:-86801388 | None:intergenic |
| ATGATGCTACCTATTGAAAT+CGG | 0.448759 | 4_1:+86799678 | Msa0581430:five_prime_UTR |
| CCTTCAGTAAGCCAATATTC+TGG | 0.454185 | 4_1:-86803669 | None:intergenic |
| GGAAAGTGAATCTGTGCTCT+TGG | 0.455346 | 4_1:+86805785 | Msa0581430:CDS |
| TACCTATTCCCATGAAAGTC+AGG | 0.457567 | 4_1:-86803988 | None:intergenic |
| ATGTTCTTCCTGACTTTCAT+GGG | 0.458051 | 4_1:+86803980 | Msa0581430:CDS |
| GACAACCTTCAGTTTCTGAT+GGG | 0.462804 | 4_1:-86802687 | None:intergenic |
| TTGTGCCAGGAATTCCTGTT+GGG | 0.464564 | 4_1:+86802611 | Msa0581430:CDS |
| AGCCCTGAATGCAGCTGGTC+AGG | 0.465495 | 4_1:+86805869 | Msa0581430:CDS |
| TTCTGTGATGGCTCAGGCGT+TGG | 0.466708 | 4_1:+86806675 | Msa0581430:CDS |
| AAGGAGAATGCTTGAACAGT+TGG | 0.468383 | 4_1:+86806705 | Msa0581430:three_prime_UTR |
| GGAGCAAATTGTTCATTCCT+GGG | 0.468555 | 4_1:+86802868 | Msa0581430:CDS |
| AGTTCTAACGGTACCTTTGG+TGG | 0.470780 | 4_1:-86800553 | None:intergenic |
| CCACTCCGAGAAACCGAAAC+AGG | 0.474301 | 4_1:-86800406 | None:intergenic |
| GGGCGAAGTGTCGCTTTCCC+TGG | 0.475188 | 4_1:+86802330 | Msa0581430:intron |
| GGAGCGAGAAGCAGAAGGTT+CGG | 0.475193 | 4_1:-86799816 | None:intergenic |
| TCAGGGCGCCTATAAAGGTT+TGG | 0.475718 | 4_1:-86803945 | None:intergenic |
| ACTGTGCAGGGCATTGCATA+TGG | 0.476650 | 4_1:+86804180 | Msa0581430:CDS |
| AACCGTATGGTGTTAGTTTG+TGG | 0.476840 | 4_1:+86802816 | Msa0581430:CDS |
| AGCAGAAGGTTCGGTGGGAG+AGG | 0.479426 | 4_1:-86799807 | None:intergenic |
| CAGGAATGAACAATTTGCTC+CGG | 0.480068 | 4_1:-86802866 | None:intergenic |
| CCCGAGATATGGAAGCTTGT+GGG | 0.481065 | 4_1:+86801387 | Msa0581430:CDS |
| TGACACAAGTGATCAACAAT+TGG | 0.484665 | 4_1:+86804140 | Msa0581430:CDS |
| ATATCTTGTATTTGGCATCA+TGG | 0.486058 | 4_1:-86806618 | None:intergenic |
| CTCGGCGTCGACGTCGGCAC+CGG | 0.486914 | 4_1:+86799845 | Msa0581430:CDS |
| GAAGGCGGGCAGAGTGCTAC+TGG | 0.487058 | 4_1:+86803687 | Msa0581430:CDS |
| GGACAACCTTCAGTTTCTGA+TGG | 0.487406 | 4_1:-86802688 | None:intergenic |
| AGCACAGATTCACTTTCCCT+TGG | 0.488663 | 4_1:-86805780 | None:intergenic |
| ATTTGCAAGGTGTATAGAAC+CGG | 0.490689 | 4_1:-86803742 | None:intergenic |
| CATCTTTCCATATCTGTATC+GGG | 0.490835 | 4_1:-86800011 | None:intergenic |
| TTGTTCATTCCTGGGATTTG+GGG | 0.492785 | 4_1:+86802876 | Msa0581430:CDS |
| TCTAACTTTCCAGCTTCTAT+GGG | 0.496091 | 4_1:+86801104 | Msa0581430:intron |
| TCAATCAATGATGTCCCAAC+AGG | 0.497590 | 4_1:-86802625 | None:intergenic |
| GGGCTTTCATGGCCTCCCTA+AGG | 0.499701 | 4_1:-86805851 | None:intergenic |
| CCTGTTTCGGTTTCTCGGAG+TGG | 0.501459 | 4_1:+86800406 | Msa0581430:CDS |
| TGATGCTCATGCTGGTGGCG+TGG | 0.503744 | 4_1:+86802645 | Msa0581430:CDS |
| CTTGTGCCAGGAATTCCTGT+TGG | 0.504324 | 4_1:+86802610 | Msa0581430:CDS |
| CCTTGCTCCTACTGCAGCGA+AGG | 0.504622 | 4_1:+86802371 | Msa0581430:CDS |
| GACGTCGACGCCGAGGAAGA+TGG | 0.505360 | 4_1:-86799837 | None:intergenic |
| ATGCTCATGCTGGTGGCGTG+GGG | 0.506408 | 4_1:+86802647 | Msa0581430:CDS |
| CCACCACAGTATTCCAATAC+AGG | 0.506731 | 4_1:-86800508 | None:intergenic |
| GAAAGTGAATCTGTGCTCTT+GGG | 0.508762 | 4_1:+86805786 | Msa0581430:CDS |
| TTGTATTGATCCTTTCAGCT+TGG | 0.509862 | 4_1:-86800477 | None:intergenic |
| CCCACAAGCTTCCATATCTC+GGG | 0.512125 | 4_1:-86801387 | None:intergenic |
| AAAGAAATATAATAGCCTTA+GGG | 0.515674 | 4_1:+86805836 | Msa0581430:CDS |
| GGTGGATGGATTTGAGTGAC+TGG | 0.517100 | 4_1:+86801166 | Msa0581430:CDS |
| CAAGGCCAGAACCCAAAGGA+TGG | 0.523635 | 4_1:-86802353 | None:intergenic |
| AAAGAACCCTATCTACATTC+AGG | 0.526921 | 4_1:+86804588 | Msa0581430:CDS |
| CATCCTTACTTTGTGACCAT+GGG | 0.529335 | 4_1:-86804232 | None:intergenic |
| CATGTTCCTGAATGTAGATA+GGG | 0.529832 | 4_1:-86804594 | None:intergenic |
| AAGAAATGTGATAGTATGGA+TGG | 0.531924 | 4_1:+86800438 | Msa0581430:CDS |
| TAATCGTTCTGTGATGGCTC+AGG | 0.533125 | 4_1:+86806669 | Msa0581430:CDS |
| ATTGCAGACCCAAAATCAAA+AGG | 0.535856 | 4_1:+86804096 | Msa0581430:CDS |
| CGAGAAGCAGAAGGTTCGGT+GGG | 0.539421 | 4_1:-86799812 | None:intergenic |
| CAATGCCCTGCACAGTTGCT+AGG | 0.539531 | 4_1:-86804173 | None:intergenic |
| TCTATACCTAGCAACTGTGC+AGG | 0.543459 | 4_1:+86804167 | Msa0581430:CDS |
| ATGAAAGCCCTGAATGCAGC+TGG | 0.545563 | 4_1:+86805864 | Msa0581430:CDS |
| GCATCCTTACTTTGTGACCA+TGG | 0.549525 | 4_1:-86804233 | None:intergenic |
| GGGAAGCAGCTCTATTTGCA+AGG | 0.553538 | 4_1:-86803755 | None:intergenic |
| TTCGCAGCTACTTGTTCACT+CGG | 0.559234 | 4_1:+86800268 | Msa0581430:CDS |
| AATATTGGCTTACTGAAGGC+GGG | 0.560778 | 4_1:+86803673 | Msa0581430:CDS |
| GGAAGCAATTTGCAACCGTA+TGG | 0.561289 | 4_1:+86802803 | Msa0581430:CDS |
| ATCTTCCTCGGCGTCGACGT+CGG | 0.564258 | 4_1:+86799839 | Msa0581430:CDS |
| CCTTCGCTGCAGTAGGAGCA+AGG | 0.565095 | 4_1:-86802371 | None:intergenic |
| CATGTCATATGGCTGTATCC+CGG | 0.565315 | 4_1:+86802847 | Msa0581430:CDS |
| GCGAGAAGCAGAAGGTTCGG+TGG | 0.565317 | 4_1:-86799813 | None:intergenic |
| GAATATTGGCTTACTGAAGG+CGG | 0.565847 | 4_1:+86803672 | Msa0581430:CDS |
| AGGAATGAACAATTTGCTCC+GGG | 0.568276 | 4_1:-86802865 | None:intergenic |
| TCTTTCTTCTTTACATAACA+CGG | 0.568763 | 4_1:-86799711 | None:intergenic |
| TTACTAATCACACGACCATA+CGG | 0.570228 | 4_1:-86806919 | None:intergenic |
| CCGATACAGATATGGAAAGA+TGG | 0.571912 | 4_1:+86800012 | Msa0581430:CDS |
| GCTGCCCTGTAATTCTTCCA+AGG | 0.574853 | 4_1:+86805763 | Msa0581430:CDS |
| GCTTCTCGCTCCATCTTCCT+CGG | 0.576028 | 4_1:+86799827 | Msa0581430:CDS |
| CATATAATTGAAAACCATGC+CGG | 0.578445 | 4_1:+86803723 | Msa0581430:CDS |
| ACCAGAAATGCAACCACCAA+AGG | 0.579084 | 4_1:+86800540 | Msa0581430:CDS |
| CAGAACCCAAAGGATGGCCA+GGG | 0.580895 | 4_1:-86802347 | None:intergenic |
| TCCCGAGATATGGAAGCTTG+TGG | 0.581118 | 4_1:+86801386 | Msa0581430:CDS |
| CTGCCCTGTAATTCTTCCAA+GGG | 0.582030 | 4_1:+86805764 | Msa0581430:CDS |
| TACCACAAACTAACACCATA+CGG | 0.584648 | 4_1:-86802818 | None:intergenic |
| TCATTGATTGATGCTCATGC+TGG | 0.585328 | 4_1:+86802637 | Msa0581430:CDS |
| AGTAGTCTACCTGACCAAAA+CGG | 0.588840 | 4_1:-86802900 | None:intergenic |
| AACCGAAACAGGTGAGCTGT+CGG | 0.593045 | 4_1:-86800395 | None:intergenic |
| GCTCTCTAATCGTTCTGTGA+TGG | 0.593052 | 4_1:+86806663 | Msa0581430:CDS |
| CAAGGTGTATAGAACCGGCA+TGG | 0.596311 | 4_1:-86803737 | None:intergenic |
| ATCATTCTGCTGCAAAACGA+GGG | 0.597147 | 4_1:-86799660 | None:intergenic |
| TGTTTATGAATTAGTTGCGG+TGG | 0.598795 | 4_1:+86800369 | Msa0581430:intron |
| TGTTCATTCCTGGGATTTGG+GGG | 0.599170 | 4_1:+86802877 | Msa0581430:CDS |
| CATCATTCTGCTGCAAAACG+AGG | 0.601352 | 4_1:-86799661 | None:intergenic |
| CTCAGGCGTTGGCATAGCAA+AGG | 0.601934 | 4_1:+86806686 | Msa0581430:exon |
| GCAGGCTTGTTTGATGAGGA+AGG | 0.605646 | 4_1:+86799964 | Msa0581430:intron |
| AAGCATATATTCATGCCTTG+TGG | 0.606122 | 4_1:+86806773 | Msa0581430:three_prime_UTR |
| CTATACCTAGCAACTGTGCA+GGG | 0.609843 | 4_1:+86804168 | Msa0581430:CDS |
| AGCAGCATAGTGATACCGTA+TGG | 0.613972 | 4_1:+86806904 | Msa0581430:three_prime_UTR |
| GCCAAATACAAGATATTCCG+TGG | 0.614406 | 4_1:+86806625 | Msa0581430:CDS |
| ATTCTTGCCTTCGCTGCAGT+AGG | 0.614851 | 4_1:-86802378 | None:intergenic |
| TGACATACTGCATGTGAGCA+TGG | 0.614970 | 4_1:-86801352 | None:intergenic |
| CGGTGCCGACGTCGACGCCG+AGG | 0.618580 | 4_1:-86799844 | None:intergenic |
| GAGCTGTAGACCAAGCTGAA+AGG | 0.619207 | 4_1:+86800467 | Msa0581430:CDS |
| TGCTCATGCTGGTGGCGTGG+GGG | 0.620437 | 4_1:+86802648 | Msa0581430:CDS |
| CCCAGACTCTGTACTTCTGT+AGG | 0.620897 | 4_1:-86800244 | None:intergenic |
| CCAGAATATTGGCTTACTGA+AGG | 0.621883 | 4_1:+86803669 | Msa0581430:CDS |
| CAACCTTCAGTTTCTGATGG+GGG | 0.623501 | 4_1:-86802685 | None:intergenic |
| GTAGAGCATTGTAATGCCCA+TGG | 0.624269 | 4_1:+86804216 | Msa0581430:CDS |
| ATCAACACATTACTTGCATG+TGG | 0.626073 | 4_1:+86804556 | Msa0581430:CDS |
| GAAATATAATAGCCTTAGGG+AGG | 0.627076 | 4_1:+86805839 | Msa0581430:CDS |
| ACAACCTTCAGTTTCTGATG+GGG | 0.628160 | 4_1:-86802686 | None:intergenic |
| ATATGTCCATTTACAAACTG+TGG | 0.629492 | 4_1:-86801324 | None:intergenic |
| TTGATTGATGCTCATGCTGG+TGG | 0.633063 | 4_1:+86802640 | Msa0581430:CDS |
| GAAAGATGGTGCCTTTGTTG+AGG | 0.636370 | 4_1:+86800026 | Msa0581430:CDS |
| AACATGTAAATCTTCAGTCA+GGG | 0.637963 | 4_1:-86803962 | None:intergenic |
| CCTACAGAAGTACAGAGTCT+GGG | 0.640434 | 4_1:+86800244 | Msa0581430:CDS |
| GGAGCAAGGCCAGAACCCAA+AGG | 0.641755 | 4_1:-86802357 | None:intergenic |
| CGTATCCTCAGAGAATGACA+AGG | 0.648996 | 4_1:+86802782 | Msa0581430:intron |
| TGATGCAGGCTTGTTTGATG+AGG | 0.649612 | 4_1:+86799960 | Msa0581430:intron |
| CAAACAAGTTACCTCAACAA+AGG | 0.656353 | 4_1:-86800037 | None:intergenic |
| GCTGTTGTTCATAAAGGCCA+CGG | 0.660748 | 4_1:-86806642 | None:intergenic |
| TTTCCCTTGGAAGAATTACA+GGG | 0.661072 | 4_1:-86805767 | None:intergenic |
| AAGATGGAGCGAGAAGCAGA+AGG | 0.666509 | 4_1:-86799821 | None:intergenic |
| AACACATTACTTGCATGTGG+AGG | 0.667479 | 4_1:+86804559 | Msa0581430:CDS |
| CCTGTATTGGAATACTGTGG+TGG | 0.701824 | 4_1:+86800508 | Msa0581430:CDS |
| TCACCTGTATTGGAATACTG+TGG | 0.766102 | 4_1:+86800505 | Msa0581430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTAAATAAGAATATAA+TGG | - | chr4_1:86800893-86800912 | None:intergenic | 10.0% |
| !!! | TTATATTCTTATTTAACTTT+TGG | + | chr4_1:86800893-86800912 | Msa0581430:intron | 10.0% |
| !! | TTATTATTAATGATAAACTT+TGG | + | chr4_1:86801808-86801827 | Msa0581430:intron | 10.0% |
| !!! | TTATTTTATGATTAGAATTA+AGG | + | chr4_1:86805945-86805964 | Msa0581430:intron | 10.0% |
| !! | ATGAATCAACATTATTATTA+CGG | - | chr4_1:86800135-86800154 | None:intergenic | 15.0% |
| !! | ACTCAATTAATTATAATAAC+AGG | + | chr4_1:86802309-86802328 | Msa0581430:intron | 15.0% |
| !! | CTCAATTAATTATAATAACA+GGG | + | chr4_1:86802310-86802329 | Msa0581430:intron | 15.0% |
| !!! | AATTTTTTTCTTTCCATTTA+TGG | + | chr4_1:86802502-86802521 | Msa0581430:intron | 15.0% |
| !! | TATCAATTAAATCTATATTC+TGG | + | chr4_1:86802927-86802946 | Msa0581430:intron | 15.0% |
| !! | ATATTCATAATTGTTTATCT+TGG | + | chr4_1:86803595-86803614 | Msa0581430:intron | 15.0% |
| !! | ATTTATTTATAGGTTATCTT+GGG | - | chr4_1:86805359-86805378 | None:intergenic | 15.0% |
| !! | TAAAACAAAATAGATTAAGA+TGG | - | chr4_1:86805559-86805578 | None:intergenic | 15.0% |
| !!! | TTTTATTTTCCGATTTCAAT+AGG | - | chr4_1:86799690-86799709 | None:intergenic | 20.0% |
| !!! | CATTTCATTTTTCGTTAAAT+TGG | + | chr4_1:86799917-86799936 | Msa0581430:intron | 20.0% |
| !!! | CTTTTTTGTGAAAGAATAAT+TGG | - | chr4_1:86800830-86800849 | None:intergenic | 20.0% |
| !!! | AATATAATTTTCTGATAGAC+AGG | - | chr4_1:86800938-86800957 | None:intergenic | 20.0% |
| !! | TAATAAATATAAGTAGATGC+TGG | - | chr4_1:86801794-86801813 | None:intergenic | 20.0% |
| !! | TCAACTTGCAATTATTTATA+TGG | + | chr4_1:86801981-86802000 | Msa0581430:intron | 20.0% |
| !!! | TTGATATAAACTTGTTAACA+AGG | - | chr4_1:86802029-86802048 | None:intergenic | 20.0% |
| !!! | CTGGTTTTGATATTATTAAT+GGG | + | chr4_1:86802565-86802584 | Msa0581430:intron | 20.0% |
| !! | AAATTACACTTATCAATTGA+AGG | - | chr4_1:86803086-86803105 | None:intergenic | 20.0% |
| !! | AAACTATAAGAGAAACTATT+AGG | + | chr4_1:86803154-86803173 | Msa0581430:intron | 20.0% |
| !! | AATGCAAAATGAAACATATT+CGG | - | chr4_1:86803364-86803383 | None:intergenic | 20.0% |
| !! | TACTTATTGTTTATCCTTTA+TGG | + | chr4_1:86803462-86803481 | Msa0581430:intron | 20.0% |
| !! | TTAAATCAAATAGAAGAGAA+TGG | - | chr4_1:86803564-86803583 | None:intergenic | 20.0% |
| !! | GCAAATATTGTATAAAACAT+AGG | - | chr4_1:86804034-86804053 | None:intergenic | 20.0% |
| !!! | TTTCTGTCATTTTTGTATAA+CGG | + | chr4_1:86805332-86805351 | Msa0581430:intron | 20.0% |
| !! | GATTTATTTATAGGTTATCT+TGG | - | chr4_1:86805360-86805379 | None:intergenic | 20.0% |
| !! | ATGAAGTGTGATTTATTTAT+AGG | - | chr4_1:86805369-86805388 | None:intergenic | 20.0% |
| !!! | TCAATTTTTTTCTTGACTTT+AGG | - | chr4_1:86805438-86805457 | None:intergenic | 20.0% |
| !!! | AAAGAAATATAATAGCCTTA+GGG | + | chr4_1:86805836-86805855 | Msa0581430:CDS | 20.0% |
| !! | GAAGTATAAATAAAGATAGA+AGG | - | chr4_1:86805912-86805931 | None:intergenic | 20.0% |
| !!! | ATCTGAAATATGTAGTAAAT+CGG | + | chr4_1:86806105-86806124 | Msa0581430:intron | 20.0% |
| !!! | TGTTTTTTTAACTAGTAACT+AGG | - | chr4_1:86806269-86806288 | None:intergenic | 20.0% |
| !!! | ATTTTCAAGGTTATGTTTTT+CGG | + | chr4_1:86806827-86806846 | Msa0581430:three_prime_UTR | 20.0% |
| ! | TCTTTCTTCTTTACATAACA+CGG | - | chr4_1:86799714-86799733 | None:intergenic | 25.0% |
| ! | TGAAATCGTTGAAAATGAAT+TGG | - | chr4_1:86799899-86799918 | None:intergenic | 25.0% |
| ! | GATTGTTTATGAATTAGTTG+CGG | + | chr4_1:86800366-86800385 | Msa0581430:intron | 25.0% |
| !!! | GTTTTAGACTTTTATGGTAA+TGG | + | chr4_1:86800636-86800655 | Msa0581430:intron | 25.0% |
| ! | ATCTGTATTGGATAAAGTTA+AGG | + | chr4_1:86800735-86800754 | Msa0581430:intron | 25.0% |
| ! | ACATCATAGTTTATTTGAGT+AGG | + | chr4_1:86800758-86800777 | Msa0581430:intron | 25.0% |
| ! | TGAAAGAATAATTGGTCAAT+AGG | - | chr4_1:86800822-86800841 | None:intergenic | 25.0% |
| ! | TTGAGTATTATACTCCTTTA+TGG | + | chr4_1:86801044-86801063 | Msa0581430:intron | 25.0% |
| ! | AAGAAAATTTGCAAGAATCT+TGG | + | chr4_1:86801130-86801149 | Msa0581430:CDS | 25.0% |
| !! | GTTGTATTTGGATTAATTTG+TGG | + | chr4_1:86801258-86801277 | Msa0581430:intron | 25.0% |
| !!! | TTAATTTGTGGCTGTTTTTT+AGG | + | chr4_1:86801270-86801289 | Msa0581430:intron | 25.0% |
| !!! | TAATTTGTGGCTGTTTTTTA+GGG | + | chr4_1:86801271-86801290 | Msa0581430:intron | 25.0% |
| !! | ACAATTAAGCTTTTGATAGA+TGG | - | chr4_1:86801514-86801533 | None:intergenic | 25.0% |
| ! | CTATCAAAAGCTTAATTGTT+AGG | + | chr4_1:86801515-86801534 | Msa0581430:intron | 25.0% |
| ! | AATTTCTTTATGAGAACGAT+GGG | + | chr4_1:86801654-86801673 | Msa0581430:intron | 25.0% |
| ! | AGTTTGTATCAAAATCTCTA+TGG | - | chr4_1:86801724-86801743 | None:intergenic | 25.0% |
| ! | AAATCAAACATGTATTTGAG+TGG | + | chr4_1:86802464-86802483 | Msa0581430:intron | 25.0% |
| !!! | GCTGGTTTTGATATTATTAA+TGG | + | chr4_1:86802564-86802583 | Msa0581430:intron | 25.0% |
| !!! | ATTAATGGGTTGAAATTTTC+AGG | + | chr4_1:86802579-86802598 | Msa0581430:intron | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr4_1:86803150-86803169 | None:intergenic | 25.0% |
| !! | TAATGAGTTGGACAAAAATA+TGG | + | chr4_1:86803191-86803210 | Msa0581430:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr4_1:86803211-86803230 | Msa0581430:intron | 25.0% |
| ! | TTCATTAATAGATCTTGCTA+TGG | + | chr4_1:86803305-86803324 | Msa0581430:intron | 25.0% |
| !!! | TATCTGAAAGGTATTCATTT+GGG | + | chr4_1:86803338-86803357 | Msa0581430:intron | 25.0% |
| !! | TTTATCTGAATTTTCAGCAA+TGG | + | chr4_1:86803644-86803663 | Msa0581430:intron | 25.0% |
| ! | ATATTCCAAATCCAAATGAT+GGG | - | chr4_1:86803797-86803816 | None:intergenic | 25.0% |
| ! | TATATTCCAAATCCAAATGA+TGG | - | chr4_1:86803798-86803817 | None:intergenic | 25.0% |
| ! | ATAAAACATAGGAAAGATGT+TGG | - | chr4_1:86804023-86804042 | None:intergenic | 25.0% |
| ! | TAATATGCTGCTATATATCT+TGG | + | chr4_1:86804061-86804080 | Msa0581430:intron | 25.0% |
| !!! | AGATAACTCCTTTTGATTTT+GGG | - | chr4_1:86804107-86804126 | None:intergenic | 25.0% |
| !!! | TAGATAACTCCTTTTGATTT+TGG | - | chr4_1:86804108-86804127 | None:intergenic | 25.0% |
| ! | AAATCAAAAGGAGTTATCTA+TGG | + | chr4_1:86804108-86804127 | Msa0581430:CDS | 25.0% |
| ! | ATAATCTCAAATTTGTGTCA+TGG | - | chr4_1:86804265-86804284 | None:intergenic | 25.0% |
| ! | TAACATCCATTACACATATT+TGG | + | chr4_1:86804312-86804331 | Msa0581430:intron | 25.0% |
| ! | AACATCCATTACACATATTT+GGG | + | chr4_1:86804313-86804332 | Msa0581430:intron | 25.0% |
| ! | ATAATCCCAAATATGTGTAA+TGG | - | chr4_1:86804321-86804340 | None:intergenic | 25.0% |
| ! | ACAATTACACAAGTAACTTT+GGG | - | chr4_1:86804443-86804462 | None:intergenic | 25.0% |
| ! | AACAATTACACAAGTAACTT+TGG | - | chr4_1:86804444-86804463 | None:intergenic | 25.0% |
| !! | ATTTCAAGCTATATTTTGCA+GGG | - | chr4_1:86805518-86805537 | None:intergenic | 25.0% |
| !! | AATTTCAAGCTATATTTTGC+AGG | - | chr4_1:86805519-86805538 | None:intergenic | 25.0% |
| !! | ATCACATTTACAATTTTCCT+AGG | + | chr4_1:86805741-86805760 | Msa0581430:intron | 25.0% |
| ! | CAAAGAAATATAATAGCCTT+AGG | + | chr4_1:86805835-86805854 | Msa0581430:CDS | 25.0% |
| ! | ATAAAGATAGAAGGAAAGAA+AGG | - | chr4_1:86805903-86805922 | None:intergenic | 25.0% |
| ! | AAAACAATGCAAATTGGTAA+TGG | - | chr4_1:86806207-86806226 | None:intergenic | 25.0% |
| !! | AGACATATTTTGCTTTCTAA+TGG | + | chr4_1:86806449-86806468 | Msa0581430:intron | 25.0% |
| !!! | CTTGTATAGAAAGCATTTAA+AGG | - | chr4_1:86806478-86806497 | None:intergenic | 25.0% |
| !! | TATAAATTTTTGCATCCACA+AGG | - | chr4_1:86806791-86806810 | None:intergenic | 25.0% |
| ! | CATAACCTTGAAAATCAATA+TGG | - | chr4_1:86806822-86806841 | None:intergenic | 25.0% |
| ATGATGCTACCTATTGAAAT+CGG | + | chr4_1:86799678-86799697 | Msa0581430:five_prime_UTR | 30.0% | |
| AAATGAATTGGAAGAAGGAA+TGG | - | chr4_1:86799887-86799906 | None:intergenic | 30.0% | |
| GTTGAAAATGAATTGGAAGA+AGG | - | chr4_1:86799892-86799911 | None:intergenic | 30.0% | |
| AATTGTGTTGTATTTGATGC+AGG | + | chr4_1:86799946-86799965 | Msa0581430:intron | 30.0% | |
| !! | TTTGTTGAGGTAACTTGTTT+GGG | + | chr4_1:86800039-86800058 | Msa0581430:intron | 30.0% |
| TATTATTACGGCAATGAAAG+TGG | - | chr4_1:86800123-86800142 | None:intergenic | 30.0% | |
| !! | AGATTGCTGTTTAGAACAAA+AGG | - | chr4_1:86800158-86800177 | None:intergenic | 30.0% |
| AGCAATCTTCTACAGATATA+TGG | + | chr4_1:86800170-86800189 | Msa0581430:intron | 30.0% | |
| GAAATTGCTGTACTTATTCA+TGG | + | chr4_1:86800311-86800330 | Msa0581430:intron | 30.0% | |
| CAAGAAGAAATGTGATAGTA+TGG | + | chr4_1:86800434-86800453 | Msa0581430:CDS | 30.0% | |
| AAGAAATGTGATAGTATGGA+TGG | + | chr4_1:86800438-86800457 | Msa0581430:CDS | 30.0% | |
| TACAAGTAAATCACCTGTAT+TGG | + | chr4_1:86800495-86800514 | Msa0581430:CDS | 30.0% | |
| !!! | AAGGCAGTTTTAGACTTTTA+TGG | + | chr4_1:86800630-86800649 | Msa0581430:intron | 30.0% |
| !! | TTATGGTAATGGATGTTCAA+CGG | + | chr4_1:86800647-86800666 | Msa0581430:intron | 30.0% |
| ! | TGTAGTAATTAACGCTTTTG+TGG | - | chr4_1:86800686-86800705 | None:intergenic | 30.0% |
| CAAGGAATCATAATCTGTAT+TGG | + | chr4_1:86800723-86800742 | Msa0581430:intron | 30.0% | |
| CTCCTTTATGGATTCAATTA+TGG | + | chr4_1:86801056-86801075 | Msa0581430:intron | 30.0% | |
| AGCCATAATTGAATCCATAA+AGG | - | chr4_1:86801061-86801080 | None:intergenic | 30.0% | |
| ATATGTCCATTTACAAACTG+TGG | - | chr4_1:86801327-86801346 | None:intergenic | 30.0% | |
| GTTTGTAAATGGACATATCT+TGG | + | chr4_1:86801329-86801348 | Msa0581430:CDS | 30.0% | |
| CAATTTCTTTATGAGAACGA+TGG | + | chr4_1:86801653-86801672 | Msa0581430:intron | 30.0% | |
| !! | CAAGAGTTTAAGTTGAAGAT+TGG | + | chr4_1:86801748-86801767 | Msa0581430:intron | 30.0% |
| ATGCAAATTTCCTGTTAAGT+AGG | + | chr4_1:86801897-86801916 | Msa0581430:intron | 30.0% | |
| ! | TTAAGTAGGTGATTTGTACT+GGG | + | chr4_1:86801911-86801930 | Msa0581430:intron | 30.0% |
| GTAAAGAATATTGCTAGACA+AGG | - | chr4_1:86802061-86802080 | None:intergenic | 30.0% | |
| !!! | ATGACATTTGTTTTAGGACA+TGG | - | chr4_1:86802098-86802117 | None:intergenic | 30.0% |
| ATGTCCTAAAACAAATGTCA+TGG | + | chr4_1:86802097-86802116 | Msa0581430:intron | 30.0% | |
| !! | TACTCCATGACATTTGTTTT+AGG | - | chr4_1:86802104-86802123 | None:intergenic | 30.0% |
| CAGAAATAAATAGCAAAGAG+TGG | - | chr4_1:86802267-86802286 | None:intergenic | 30.0% | |
| TGAGTATCAAGATAAGAAGT+GGG | - | chr4_1:86802294-86802313 | None:intergenic | 30.0% | |
| TTGAGTATCAAGATAAGAAG+TGG | - | chr4_1:86802295-86802314 | None:intergenic | 30.0% | |
| TATTTGAGTGGTTGGAAAAA+TGG | + | chr4_1:86802476-86802495 | Msa0581430:intron | 30.0% | |
| AGTGAAACAATCTCCATAAA+TGG | - | chr4_1:86802518-86802537 | None:intergenic | 30.0% | |
| GACTTACAAGCATAAATACA+AGG | - | chr4_1:86802722-86802741 | None:intergenic | 30.0% | |
| ! | ACTACAATTTTCAACCATTG+TGG | - | chr4_1:86803058-86803077 | None:intergenic | 30.0% |
| TATCTGACTTACTATCGAAA+AGG | - | chr4_1:86803110-86803129 | None:intergenic | 30.0% | |
| AGACTTGAAGATTAATGAGT+TGG | + | chr4_1:86803179-86803198 | Msa0581430:intron | 30.0% | |
| ! | TTAATAGATCTTGCTATGGT+TGG | + | chr4_1:86803309-86803328 | Msa0581430:intron | 30.0% |
| !! | GTATCTGAAAGGTATTCATT+TGG | + | chr4_1:86803337-86803356 | Msa0581430:intron | 30.0% |
| TATCGCAAATGTCATTCATA+TGG | + | chr4_1:86803411-86803430 | Msa0581430:intron | 30.0% | |
| ATCGCAAATGTCATTCATAT+GGG | + | chr4_1:86803412-86803431 | Msa0581430:intron | 30.0% | |
| ! | CTTTGTGAACATATTTTGCA+TGG | + | chr4_1:86803438-86803457 | Msa0581430:intron | 30.0% |
| CCAATATCAATGTTCCATAA+AGG | - | chr4_1:86803479-86803498 | None:intergenic | 30.0% | |
| CCTTTATGGAACATTGATAT+TGG | + | chr4_1:86803476-86803495 | Msa0581430:intron | 30.0% | |
| TTGATATTGGCATAGAAAGT+AGG | + | chr4_1:86803489-86803508 | Msa0581430:intron | 30.0% | |
| CATATAATTGAAAACCATGC+CGG | + | chr4_1:86803723-86803742 | Msa0581430:CDS | 30.0% | |
| TGGGAAAAAAACCTTACTTT+GGG | - | chr4_1:86803778-86803797 | None:intergenic | 30.0% | |
| ATGGGAAAAAAACCTTACTT+TGG | - | chr4_1:86803779-86803798 | None:intergenic | 30.0% | |
| !!! | AAGGTTTTTTTCCCATCATT+TGG | + | chr4_1:86803783-86803802 | Msa0581430:intron | 30.0% |
| ! | TTTTTCCCATCATTTGGATT+TGG | + | chr4_1:86803789-86803808 | Msa0581430:intron | 30.0% |
| AACATGTAAATCTTCAGTCA+GGG | - | chr4_1:86803965-86803984 | None:intergenic | 30.0% | |
| TTTCATGGGAATAGGTAATT+TGG | + | chr4_1:86803994-86804013 | Msa0581430:intron | 30.0% | |
| TGAGATTATTACCAGTTCTT+TGG | + | chr4_1:86804276-86804295 | Msa0581430:intron | 30.0% | |
| GAGATTATTACCAGTTCTTT+GGG | + | chr4_1:86804277-86804296 | Msa0581430:intron | 30.0% | |
| TGGGATTATTATCAGTTCTT+TGG | + | chr4_1:86804332-86804351 | Msa0581430:intron | 30.0% | |
| GGGATTATTATCAGTTCTTT+GGG | + | chr4_1:86804333-86804352 | Msa0581430:intron | 30.0% | |
| TTATTATCAGTTCTTTGGGT+TGG | + | chr4_1:86804337-86804356 | Msa0581430:intron | 30.0% | |
| ATAGTAAGGAACATTTCAGT+GGG | - | chr4_1:86804393-86804412 | None:intergenic | 30.0% | |
| AATTACACAAGTAACTTTGG+GGG | - | chr4_1:86804441-86804460 | None:intergenic | 30.0% | |
| CAATTACACAAGTAACTTTG+GGG | - | chr4_1:86804442-86804461 | None:intergenic | 30.0% | |
| TATGCTAGTATGCGTTATAT+AGG | + | chr4_1:86804737-86804756 | Msa0581430:intron | 30.0% | |
| ATGCTAGTATGCGTTATATA+GGG | + | chr4_1:86804738-86804757 | Msa0581430:intron | 30.0% | |
| ATATATGATAGAGCGTGATA+TGG | - | chr4_1:86804846-86804865 | None:intergenic | 30.0% | |
| AGTAAGGAAAGTAGATTTGA+CGG | - | chr4_1:86804964-86804983 | None:intergenic | 30.0% | |
| ! | TCAACCATCTTTTCTACAAT+AGG | + | chr4_1:86805035-86805054 | Msa0581430:intron | 30.0% |
| ATAGCATTAGAGTTAGAGTT+GGG | - | chr4_1:86805067-86805086 | None:intergenic | 30.0% | |
| ! | AAAGTCTGAAATGCTAACAA+GGG | - | chr4_1:86805464-86805483 | None:intergenic | 30.0% |
| ! | TAAAGTCTGAAATGCTAACA+AGG | - | chr4_1:86805465-86805484 | None:intergenic | 30.0% |
| AGCATTTCAGACTTTATACA+TGG | + | chr4_1:86805469-86805488 | Msa0581430:intron | 30.0% | |
| CTTGAAATTGTTCCATGATT+TGG | + | chr4_1:86805530-86805549 | Msa0581430:intron | 30.0% | |
| TTAAGATGGAATCCAAATCA+TGG | - | chr4_1:86805545-86805564 | None:intergenic | 30.0% | |
| TTGTAACTTTATGCCATTAC+TGG | - | chr4_1:86805994-86806013 | None:intergenic | 30.0% | |
| ATGGCATAAAGTTACAAGTT+AGG | + | chr4_1:86805997-86806016 | Msa0581430:intron | 30.0% | |
| TAAAGTTACAAGTTAGGATG+AGG | + | chr4_1:86806003-86806022 | Msa0581430:intron | 30.0% | |
| ! | TACTGCAAATGTTGATGAAA+CGG | - | chr4_1:86806049-86806068 | None:intergenic | 30.0% |
| TATTTCAGATCCTACTAGTT+TGG | - | chr4_1:86806095-86806114 | None:intergenic | 30.0% | |
| CTTCACAAAACAATGCAAAT+TGG | - | chr4_1:86806213-86806232 | None:intergenic | 30.0% | |
| AGCATGTCCATAAAATAGTT+TGG | + | chr4_1:86806231-86806250 | Msa0581430:intron | 30.0% | |
| GCATGTCCATAAAATAGTTT+GGG | + | chr4_1:86806232-86806251 | Msa0581430:intron | 30.0% | |
| ! | TCACATCCCAAACTATTTTA+TGG | - | chr4_1:86806241-86806260 | None:intergenic | 30.0% |
| TTAACCGTCTATAGATGATT+AGG | + | chr4_1:86806387-86806406 | Msa0581430:intron | 30.0% | |
| AAAATATGTCTATAGTGCAC+AGG | - | chr4_1:86806440-86806459 | None:intergenic | 30.0% | |
| AAATGCTTTCTATACAAGTC+AGG | + | chr4_1:86806480-86806499 | Msa0581430:intron | 30.0% | |
| !!! | TCATGGTACTTTTTCACTTT+TGG | - | chr4_1:86806604-86806623 | None:intergenic | 30.0% |
| ATATCTTGTATTTGGCATCA+TGG | - | chr4_1:86806621-86806640 | None:intergenic | 30.0% | |
| AACTTTCAACTGCAATTAGA+TGG | + | chr4_1:86806735-86806754 | Msa0581430:three_prime_UTR | 30.0% | |
| !!! | TGATGCCATATTGATTTTCA+AGG | + | chr4_1:86806814-86806833 | Msa0581430:three_prime_UTR | 30.0% |
| CATCTTTCCATATCTGTATC+GGG | - | chr4_1:86800014-86800033 | None:intergenic | 35.0% | |
| CCATCTTTCCATATCTGTAT+CGG | - | chr4_1:86800015-86800034 | None:intergenic | 35.0% | |
| CAAACAAGTTACCTCAACAA+AGG | - | chr4_1:86800040-86800059 | None:intergenic | 35.0% | |
| !! | CTTTGTTGAGGTAACTTGTT+TGG | + | chr4_1:86800038-86800057 | Msa0581430:intron | 35.0% |
| TGTTTATGAATTAGTTGCGG+TGG | + | chr4_1:86800369-86800388 | Msa0581430:intron | 35.0% | |
| ! | TTGTATTGATCCTTTCAGCT+TGG | - | chr4_1:86800480-86800499 | None:intergenic | 35.0% |
| TAGTCCCATTATTTGATCTC+TGG | + | chr4_1:86800581-86800600 | Msa0581430:intron | 35.0% | |
| GTGACCAGAGATCAAATAAT+GGG | - | chr4_1:86800588-86800607 | None:intergenic | 35.0% | |
| GAACAGATACTACACTACAT+TGG | - | chr4_1:86800610-86800629 | None:intergenic | 35.0% | |
| TGTAGTGTAGTATCTGTTCA+AGG | + | chr4_1:86800611-86800630 | Msa0581430:intron | 35.0% | |
| AATGGATGTTCAACGGTTAA+TGG | + | chr4_1:86800654-86800673 | Msa0581430:intron | 35.0% | |
| TTACTACATCTGCAAGCAAA+TGG | + | chr4_1:86800698-86800717 | Msa0581430:intron | 35.0% | |
| TACTACATCTGCAAGCAAAT+GGG | + | chr4_1:86800699-86800718 | Msa0581430:intron | 35.0% | |
| ACCAGTTAAACACAGTTGAT+AGG | + | chr4_1:86800783-86800802 | Msa0581430:intron | 35.0% | |
| TCCTATCAACTGTGTTTAAC+TGG | - | chr4_1:86800787-86800806 | None:intergenic | 35.0% | |
| AGCTTCAAAGGAAATTCGTA+GGG | - | chr4_1:86800961-86800980 | None:intergenic | 35.0% | |
| TAGCTTCAAAGGAAATTCGT+AGG | - | chr4_1:86800962-86800981 | None:intergenic | 35.0% | |
| ATCTAACTTTCCAGCTTCTA+TGG | + | chr4_1:86801103-86801122 | Msa0581430:intron | 35.0% | |
| TCTAACTTTCCAGCTTCTAT+GGG | + | chr4_1:86801104-86801123 | Msa0581430:intron | 35.0% | |
| TTTCTTTAACCCATAGAAGC+TGG | - | chr4_1:86801116-86801135 | None:intergenic | 35.0% | |
| TTTGCAAGAATCTTGGTCAA+TGG | + | chr4_1:86801137-86801156 | Msa0581430:CDS | 35.0% | |
| ! | AATCTTGGTCAATGGTTTTC+AGG | + | chr4_1:86801145-86801164 | Msa0581430:CDS | 35.0% |
| TGTTCGAGTCTAGTTGTATT+TGG | + | chr4_1:86801246-86801265 | Msa0581430:intron | 35.0% | |
| TTTGCACCACAGTTTGTAAA+TGG | + | chr4_1:86801318-86801337 | Msa0581430:CDS | 35.0% | |
| !! | TTTTGGGAGGAAATTGGTTT+GGG | + | chr4_1:86801422-86801441 | Msa0581430:intron | 35.0% |
| TTGATAGATGGTTCTTGACA+AGG | - | chr4_1:86801502-86801521 | None:intergenic | 35.0% | |
| AAAGCTTAATTGTTAGGTGC+TGG | + | chr4_1:86801521-86801540 | Msa0581430:intron | 35.0% | |
| AAGCTTAATTGTTAGGTGCT+GGG | + | chr4_1:86801522-86801541 | Msa0581430:intron | 35.0% | |
| !! | ACAAACGTTTCAAGTTCAAG+AGG | - | chr4_1:86801602-86801621 | None:intergenic | 35.0% |
| GTACAAATCACCTACTTAAC+AGG | - | chr4_1:86801910-86801929 | None:intergenic | 35.0% | |
| ! | GTTAAGTAGGTGATTTGTAC+TGG | + | chr4_1:86801910-86801929 | Msa0581430:intron | 35.0% |
| GCAATATTCTTTACTCCCTA+TGG | + | chr4_1:86802067-86802086 | Msa0581430:intron | 35.0% | |
| ! | ATATTCTTTTCATGCTCGAC+CGG | + | chr4_1:86802201-86802220 | Msa0581430:intron | 35.0% |
| CAAACATGTATTTGAGTGGT+TGG | + | chr4_1:86802468-86802487 | Msa0581430:intron | 35.0% | |
| TGGAGATTGTTTCACTTTGA+TGG | + | chr4_1:86802522-86802541 | Msa0581430:intron | 35.0% | |
| GGAGATTGTTTCACTTTGAT+GGG | + | chr4_1:86802523-86802542 | Msa0581430:intron | 35.0% | |
| !! | GGTTGAAATTTTCAGGAACT+GGG | + | chr4_1:86802586-86802605 | Msa0581430:intron | 35.0% |
| CATAAATACAAGGTAAGTCG+TGG | - | chr4_1:86802712-86802731 | None:intergenic | 35.0% | |
| TACCACAAACTAACACCATA+CGG | - | chr4_1:86802821-86802840 | None:intergenic | 35.0% | |
| TGGTACTTCTACATGTCATA+TGG | + | chr4_1:86802836-86802855 | Msa0581430:CDS | 35.0% | |
| AATTGTTCATTCCTGGGATT+TGG | + | chr4_1:86802874-86802893 | Msa0581430:CDS | 35.0% | |
| ATTGTTCATTCCTGGGATTT+GGG | + | chr4_1:86802875-86802894 | Msa0581430:CDS | 35.0% | |
| ACCCAGAGTAAATAGTACAT+GGG | - | chr4_1:86802998-86803017 | None:intergenic | 35.0% | |
| TACCCAGAGTAAATAGTACA+TGG | - | chr4_1:86802999-86803018 | None:intergenic | 35.0% | |
| GATAGTAAGTCAGATACTAG+AGG | + | chr4_1:86803114-86803133 | Msa0581430:intron | 35.0% | |
| ATATTGGCATAGAAAGTAGG+AGG | + | chr4_1:86803492-86803511 | Msa0581430:intron | 35.0% | |
| ATTTGCAAGGTGTATAGAAC+CGG | - | chr4_1:86803745-86803764 | None:intergenic | 35.0% | |
| GAACATGTAAATCTTCAGTC+AGG | - | chr4_1:86803966-86803985 | None:intergenic | 35.0% | |
| ATGTTCTTCCTGACTTTCAT+GGG | + | chr4_1:86803980-86803999 | Msa0581430:CDS | 35.0% | |
| TATAGCAGCATATTAGTCAC+AGG | - | chr4_1:86804056-86804075 | None:intergenic | 35.0% | |
| !! | TTTGATTTTGGGTCTGCAAT+GGG | - | chr4_1:86804096-86804115 | None:intergenic | 35.0% |
| !!! | TTTTGATTTTGGGTCTGCAA+TGG | - | chr4_1:86804097-86804116 | None:intergenic | 35.0% |
| ATTGCAGACCCAAAATCAAA+AGG | + | chr4_1:86804096-86804115 | Msa0581430:CDS | 35.0% | |
| TGACACAAGTGATCAACAAT+TGG | + | chr4_1:86804140-86804159 | Msa0581430:CDS | 35.0% | |
| TTATTACCAGTTCTTTGGGT+TGG | + | chr4_1:86804281-86804300 | Msa0581430:intron | 35.0% | |
| CATAGTAAGGAACATTTCAG+TGG | - | chr4_1:86804394-86804413 | None:intergenic | 35.0% | |
| ATCAACACATTACTTGCATG+TGG | + | chr4_1:86804556-86804575 | Msa0581430:CDS | 35.0% | |
| TGTAGATAGGGTTCTTTGAT+AGG | - | chr4_1:86804585-86804604 | None:intergenic | 35.0% | |
| AAAGAACCCTATCTACATTC+AGG | + | chr4_1:86804588-86804607 | Msa0581430:CDS | 35.0% | |
| CATGTTCCTGAATGTAGATA+GGG | - | chr4_1:86804597-86804616 | None:intergenic | 35.0% | |
| CAGGAACATGCTGATATTAT+TGG | + | chr4_1:86804607-86804626 | Msa0581430:CDS | 35.0% | |
| GTTCAGTGTATAGAATGTCA+TGG | + | chr4_1:86804685-86804704 | Msa0581430:intron | 35.0% | |
| TATCCAAACCATAGACTACT+AGG | + | chr4_1:86804874-86804893 | Msa0581430:intron | 35.0% | |
| AAGAAAGACCTAGTAGTCTA+TGG | - | chr4_1:86804885-86804904 | None:intergenic | 35.0% | |
| AGCACCTATTGTAGAAAAGA+TGG | - | chr4_1:86805042-86805061 | None:intergenic | 35.0% | |
| GATAGCATTAGAGTTAGAGT+TGG | - | chr4_1:86805068-86805087 | None:intergenic | 35.0% | |
| ATACTAGGCGAGATAAGATT+AGG | - | chr4_1:86805094-86805113 | None:intergenic | 35.0% | |
| AACTGTAAGCGATGTTGTAT+GGG | - | chr4_1:86805199-86805218 | None:intergenic | 35.0% | |
| ! | AAGGTACCACTCAAGATAAA+GGG | - | chr4_1:86805237-86805256 | None:intergenic | 35.0% |
| !! | AAAGGTACCACTCAAGATAA+AGG | - | chr4_1:86805238-86805257 | None:intergenic | 35.0% |
| !! | GGGGGTTTTATGTGATAAAA+AGG | - | chr4_1:86805256-86805275 | None:intergenic | 35.0% |
| TTTATCACATAAAACCCCCA+AGG | + | chr4_1:86805257-86805276 | Msa0581430:intron | 35.0% | |
| TTATCACATAAAACCCCCAA+GGG | + | chr4_1:86805258-86805277 | Msa0581430:intron | 35.0% | |
| !! | AAGCAAGGTTGATGAAATGA+AGG | - | chr4_1:86805287-86805306 | None:intergenic | 35.0% |
| AACAGAGAGATGTAAACCAT+CGG | - | chr4_1:86805314-86805333 | None:intergenic | 35.0% | |
| !! | GGATTGGTTCGTAAAATACA+CGG | - | chr4_1:86805396-86805415 | None:intergenic | 35.0% |
| TTTAACCTTGAACTGTGGAT+TGG | - | chr4_1:86805412-86805431 | None:intergenic | 35.0% | |
| !!! | GGTTTTTTAACCTTGAACTG+TGG | - | chr4_1:86805417-86805436 | None:intergenic | 35.0% |
| TTTCCCTTGGAAGAATTACA+GGG | - | chr4_1:86805770-86805789 | None:intergenic | 35.0% | |
| ! | GAAATATAATAGCCTTAGGG+AGG | + | chr4_1:86805839-86805858 | Msa0581430:CDS | 35.0% |
| TAAGAGTGACTTTATGGCAA+TGG | - | chr4_1:86805971-86805990 | None:intergenic | 35.0% | |
| TACTGGTAAGAGTGACTTTA+TGG | - | chr4_1:86805977-86805996 | None:intergenic | 35.0% | |
| AAAGTCACTCTTACCAGTAA+TGG | + | chr4_1:86805978-86805997 | Msa0581430:intron | 35.0% | |
| CAGTAAAGTGAGAATGAAGT+TGG | + | chr4_1:86806064-86806083 | Msa0581430:intron | 35.0% | |
| GAACTGATACTGCGTTATTT+AGG | - | chr4_1:86806131-86806150 | None:intergenic | 35.0% | |
| AACGCAGTATCAGTTCATAT+AGG | + | chr4_1:86806135-86806154 | Msa0581430:intron | 35.0% | |
| ACGCAGTATCAGTTCATATA+GGG | + | chr4_1:86806136-86806155 | Msa0581430:intron | 35.0% | |
| ATTAATTAATGCAGCCTCTC+AGG | - | chr4_1:86806344-86806363 | None:intergenic | 35.0% | |
| CTCACCTAATCATCTATAGA+CGG | - | chr4_1:86806394-86806413 | None:intergenic | 35.0% | |
| ! | TTTTCCCTGAACGACTAATA+AGG | + | chr4_1:86806540-86806559 | Msa0581430:intron | 35.0% |
| !! | TTCACTTTTGGATCAGTAGA+TGG | - | chr4_1:86806592-86806611 | None:intergenic | 35.0% |
| TAGAGAGCTGTTGTTCATAA+AGG | - | chr4_1:86806651-86806670 | None:intergenic | 35.0% | |
| AAGCATATATTCATGCCTTG+TGG | + | chr4_1:86806773-86806792 | Msa0581430:three_prime_UTR | 35.0% | |
| CTGCTAAGTATGTGACAAAA+TGG | - | chr4_1:86806886-86806905 | None:intergenic | 35.0% | |
| TTACTAATCACACGACCATA+CGG | - | chr4_1:86806922-86806941 | None:intergenic | 35.0% | |
| TGGTCGTGTGATTAGTAAAT+TGG | + | chr4_1:86806924-86806943 | Msa0581430:three_prime_UTR | 35.0% | |
| ATCATTCTGCTGCAAAACGA+GGG | - | chr4_1:86799663-86799682 | None:intergenic | 40.0% | |
| ACTGTGTCTGTGTGTGTAAT+CGG | - | chr4_1:86799778-86799797 | None:intergenic | 40.0% | |
| CCGATACAGATATGGAAAGA+TGG | + | chr4_1:86800012-86800031 | Msa0581430:CDS | 40.0% | |
| CTACTCAGTTCGAAATGTGT+TGG | + | chr4_1:86800091-86800110 | Msa0581430:intron | 40.0% | |
| TCACCTGTATTGGAATACTG+TGG | + | chr4_1:86800505-86800524 | Msa0581430:CDS | 40.0% | |
| !! | TCTAGTTCTAACGGTACCTT+TGG | - | chr4_1:86800559-86800578 | None:intergenic | 40.0% |
| !! | GGGACTAGTTCTAGTTCTAA+CGG | - | chr4_1:86800568-86800587 | None:intergenic | 40.0% |
| GGTGACCAGAGATCAAATAA+TGG | - | chr4_1:86800589-86800608 | None:intergenic | 40.0% | |
| AACGAGTCTAGTAGCTTCAA+AGG | - | chr4_1:86800973-86800992 | None:intergenic | 40.0% | |
| TTGAAGCTACTAGACTCGTT+AGG | + | chr4_1:86800973-86800992 | Msa0581430:intron | 40.0% | |
| CTGGAAAGTTAGATCGTATC+GGG | - | chr4_1:86801097-86801116 | None:intergenic | 40.0% | |
| GCTGGAAAGTTAGATCGTAT+CGG | - | chr4_1:86801098-86801117 | None:intergenic | 40.0% | |
| CTCAAGTCTTCTTGATGTTC+AGG | + | chr4_1:86801213-86801232 | Msa0581430:intron | 40.0% | |
| ! | CTTGATGTTCAGGTTCAGTT+TGG | + | chr4_1:86801223-86801242 | Msa0581430:intron | 40.0% |
| TGATACAGATTCCCGAGATA+TGG | + | chr4_1:86801376-86801395 | Msa0581430:CDS | 40.0% | |
| !!! | GATGAGTTTTGGGAGGAAAT+TGG | + | chr4_1:86801416-86801435 | Msa0581430:intron | 40.0% |
| !!! | GTTTTGGGAGGAAATTGGTT+TGG | + | chr4_1:86801421-86801440 | Msa0581430:intron | 40.0% |
| GAAGGACATCATGCTAAACT+AGG | + | chr4_1:86801455-86801474 | Msa0581430:intron | 40.0% | |
| TTGTAACACAAGAGCTGACA+TGG | + | chr4_1:86801618-86801637 | Msa0581430:intron | 40.0% | |
| TGTAACACAAGAGCTGACAT+GGG | + | chr4_1:86801619-86801638 | Msa0581430:intron | 40.0% | |
| ! | CTTTATGAGAACGATGGGTT+TGG | + | chr4_1:86801659-86801678 | Msa0581430:intron | 40.0% |
| TAGGACATGGACTTTCCATA+GGG | - | chr4_1:86802085-86802104 | None:intergenic | 40.0% | |
| TTAGGACATGGACTTTCCAT+AGG | - | chr4_1:86802086-86802105 | None:intergenic | 40.0% | |
| !! | TTTGAACTGCTGCTTTCTTG+AGG | + | chr4_1:86802432-86802451 | Msa0581430:intron | 40.0% |
| !! | GGGTTGAAATTTTCAGGAAC+TGG | + | chr4_1:86802585-86802604 | Msa0581430:intron | 40.0% |
| TCAATCAATGATGTCCCAAC+AGG | - | chr4_1:86802628-86802647 | None:intergenic | 40.0% | |
| ! | TCATTGATTGATGCTCATGC+TGG | + | chr4_1:86802637-86802656 | Msa0581430:CDS | 40.0% |
| ACAACCTTCAGTTTCTGATG+GGG | - | chr4_1:86802689-86802708 | None:intergenic | 40.0% | |
| GACAACCTTCAGTTTCTGAT+GGG | - | chr4_1:86802690-86802709 | None:intergenic | 40.0% | |
| ! | AACCGTATGGTGTTAGTTTG+TGG | + | chr4_1:86802816-86802835 | Msa0581430:CDS | 40.0% |
| ! | AGGAATGAACAATTTGCTCC+GGG | - | chr4_1:86802868-86802887 | None:intergenic | 40.0% |
| ! | CAGGAATGAACAATTTGCTC+CGG | - | chr4_1:86802869-86802888 | None:intergenic | 40.0% |
| GGAGCAAATTGTTCATTCCT+GGG | + | chr4_1:86802868-86802887 | Msa0581430:CDS | 40.0% | |
| TTGTTCATTCCTGGGATTTG+GGG | + | chr4_1:86802876-86802895 | Msa0581430:CDS | 40.0% | |
| AGTAGTCTACCTGACCAAAA+CGG | - | chr4_1:86802903-86802922 | None:intergenic | 40.0% | |
| AGCCCATGTACTATTTACTC+TGG | + | chr4_1:86802993-86803012 | Msa0581430:intron | 40.0% | |
| GCCCATGTACTATTTACTCT+GGG | + | chr4_1:86802994-86803013 | Msa0581430:intron | 40.0% | |
| ! | CTAAACTGCGTAGTTTTCCA+TGG | - | chr4_1:86803026-86803045 | None:intergenic | 40.0% |
| TTTAGACGTCAGTACCACAA+TGG | + | chr4_1:86803041-86803060 | Msa0581430:intron | 40.0% | |
| GGTTGGAACTTGTATCTGAA+AGG | + | chr4_1:86803326-86803345 | Msa0581430:intron | 40.0% | |
| CAGCAATGGTACCAGAATAT+TGG | + | chr4_1:86803658-86803677 | Msa0581430:intron | 40.0% | |
| CCTTCAGTAAGCCAATATTC+TGG | - | chr4_1:86803672-86803691 | None:intergenic | 40.0% | |
| !! | CCAGAATATTGGCTTACTGA+AGG | + | chr4_1:86803669-86803688 | Msa0581430:CDS | 40.0% |
| !! | GAATATTGGCTTACTGAAGG+CGG | + | chr4_1:86803672-86803691 | Msa0581430:CDS | 40.0% |
| !! | AATATTGGCTTACTGAAGGC+GGG | + | chr4_1:86803673-86803692 | Msa0581430:CDS | 40.0% |
| GAGCAGAACCAAACCTTTAT+AGG | + | chr4_1:86803937-86803956 | Msa0581430:CDS | 40.0% | |
| CATGTTCTTCCTGACTTTCA+TGG | + | chr4_1:86803979-86803998 | Msa0581430:CDS | 40.0% | |
| TTCCTGACTTTCATGGGAAT+AGG | + | chr4_1:86803986-86804005 | Msa0581430:CDS | 40.0% | |
| TACCTATTCCCATGAAAGTC+AGG | - | chr4_1:86803991-86804010 | None:intergenic | 40.0% | |
| CATCCTTACTTTGTGACCAT+GGG | - | chr4_1:86804235-86804254 | None:intergenic | 40.0% | |
| AAATAGCCAACCCAAAGAAC+TGG | - | chr4_1:86804290-86804309 | None:intergenic | 40.0% | |
| TGTTCCTTACTATGAACGTG+AGG | + | chr4_1:86804400-86804419 | Msa0581430:intron | 40.0% | |
| AGATCCTCACGTTCATAGTA+AGG | - | chr4_1:86804407-86804426 | None:intergenic | 40.0% | |
| TGTTGCCAAGTCATTACTCT+TGG | + | chr4_1:86804478-86804497 | Msa0581430:intron | 40.0% | |
| AACAGCCAAGAGTAATGACT+TGG | - | chr4_1:86804486-86804505 | None:intergenic | 40.0% | |
| AACACATTACTTGCATGTGG+AGG | + | chr4_1:86804559-86804578 | Msa0581430:CDS | 40.0% | |
| GCATGTTCCTGAATGTAGAT+AGG | - | chr4_1:86804598-86804617 | None:intergenic | 40.0% | |
| ATGCGTTATATAGGGTTGCA+TGG | + | chr4_1:86804746-86804765 | Msa0581430:intron | 40.0% | |
| TGCGTTATATAGGGTTGCAT+GGG | + | chr4_1:86804747-86804766 | Msa0581430:intron | 40.0% | |
| AGACCTAGTAGTCTATGGTT+TGG | - | chr4_1:86804880-86804899 | None:intergenic | 40.0% | |
| GACTACTAGGTCTTTCTTGA+TGG | + | chr4_1:86804887-86804906 | Msa0581430:intron | 40.0% | |
| AAGGAAAGTAGATTTGACGG+AGG | - | chr4_1:86804961-86804980 | None:intergenic | 40.0% | |
| TTCCTTACTACAGAATCTCC+AGG | + | chr4_1:86804975-86804994 | Msa0581430:intron | 40.0% | |
| AATCTCGTCTTAGGTGGTTT+GGG | - | chr4_1:86805016-86805035 | None:intergenic | 40.0% | |
| AGATGGTTGAATCTCGTCTT+AGG | - | chr4_1:86805025-86805044 | None:intergenic | 40.0% | |
| GTTGGATGTGCGAAAATACT+AGG | - | chr4_1:86805109-86805128 | None:intergenic | 40.0% | |
| CAAAGAAGAGAATGCTACGT+TGG | - | chr4_1:86805127-86805146 | None:intergenic | 40.0% | |
| CAACTGTAAGCGATGTTGTA+TGG | - | chr4_1:86805200-86805219 | None:intergenic | 40.0% | |
| AACTTCCCCTTTATCTTGAG+TGG | + | chr4_1:86805228-86805247 | Msa0581430:intron | 40.0% | |
| AGGTACCACTCAAGATAAAG+GGG | - | chr4_1:86805236-86805255 | None:intergenic | 40.0% | |
| TATCACATAAAACCCCCAAG+GGG | + | chr4_1:86805259-86805278 | Msa0581430:intron | 40.0% | |
| TAAACCATCGGATTCAAGCA+AGG | - | chr4_1:86805302-86805321 | None:intergenic | 40.0% | |
| GGCACAAGTATTTGAGAACT+TGG | + | chr4_1:86805490-86805509 | Msa0581430:intron | 40.0% | |
| TCCTATGCATCCAAATGATG+AGG | + | chr4_1:86805605-86805624 | Msa0581430:intron | 40.0% | |
| TCCTCATCATTTGGATGCAT+AGG | - | chr4_1:86805609-86805628 | None:intergenic | 40.0% | |
| CTTTCCCTTGGAAGAATTAC+AGG | - | chr4_1:86805771-86805790 | None:intergenic | 40.0% | |
| GAAAGTGAATCTGTGCTCTT+GGG | + | chr4_1:86805786-86805805 | Msa0581430:CDS | 40.0% | |
| GTTGGAACTACCAAACTAGT+AGG | + | chr4_1:86806082-86806101 | Msa0581430:intron | 40.0% | |
| CGCAGTATCAGTTCATATAG+GGG | + | chr4_1:86806137-86806156 | Msa0581430:intron | 40.0% | |
| GGCAATTGAGTTTAGTAGCT+CGG | - | chr4_1:86806419-86806438 | None:intergenic | 40.0% | |
| TTAGTCGTTCAGGGAAAACT+GGG | - | chr4_1:86806538-86806557 | None:intergenic | 40.0% | |
| ATTAGTCGTTCAGGGAAAAC+TGG | - | chr4_1:86806539-86806558 | None:intergenic | 40.0% | |
| TGCACCTTATTAGTCGTTCA+GGG | - | chr4_1:86806547-86806566 | None:intergenic | 40.0% | |
| ATGCACCTTATTAGTCGTTC+AGG | - | chr4_1:86806548-86806567 | None:intergenic | 40.0% | |
| TGAACGACTAATAAGGTGCA+TGG | + | chr4_1:86806547-86806566 | Msa0581430:intron | 40.0% | |
| GCCAAATACAAGATATTCCG+TGG | + | chr4_1:86806625-86806644 | Msa0581430:CDS | 40.0% | |
| GCCACGGAATATCTTGTATT+TGG | - | chr4_1:86806629-86806648 | None:intergenic | 40.0% | |
| AAGGAGAATGCTTGAACAGT+TGG | + | chr4_1:86806705-86806724 | Msa0581430:three_prime_UTR | 40.0% | |
| CATCATTCTGCTGCAAAACG+AGG | - | chr4_1:86799664-86799683 | None:intergenic | 45.0% | |
| CACACAGACACAGTCATAGA+TGG | + | chr4_1:86799784-86799803 | Msa0581430:intron | 45.0% | |
| ! | TGATGCAGGCTTGTTTGATG+AGG | + | chr4_1:86799960-86799979 | Msa0581430:intron | 45.0% |
| GATGAGGAAGGAAAGCTTCT+CGG | + | chr4_1:86799976-86799995 | Msa0581430:CDS | 45.0% | |
| GAAAGATGGTGCCTTTGTTG+AGG | + | chr4_1:86800026-86800045 | Msa0581430:CDS | 45.0% | |
| !! | TGAGGTAACTTGTTTGGGAG+TGG | + | chr4_1:86800044-86800063 | Msa0581430:intron | 45.0% |
| ! | ACCTACAGAAGTACAGAGTC+TGG | + | chr4_1:86800243-86800262 | Msa0581430:CDS | 45.0% |
| ! | CCTACAGAAGTACAGAGTCT+GGG | + | chr4_1:86800244-86800263 | Msa0581430:CDS | 45.0% |
| TTCGCAGCTACTTGTTCACT+CGG | + | chr4_1:86800268-86800287 | Msa0581430:CDS | 45.0% | |
| CCACCACAGTATTCCAATAC+AGG | - | chr4_1:86800511-86800530 | None:intergenic | 45.0% | |
| CCTGTATTGGAATACTGTGG+TGG | + | chr4_1:86800508-86800527 | Msa0581430:CDS | 45.0% | |
| ACCAGAAATGCAACCACCAA+AGG | + | chr4_1:86800540-86800559 | Msa0581430:CDS | 45.0% | |
| ! | ACCTTTGGTGGTTGCATTTC+TGG | - | chr4_1:86800544-86800563 | None:intergenic | 45.0% |
| ! | AGTTCTAACGGTACCTTTGG+TGG | - | chr4_1:86800556-86800575 | None:intergenic | 45.0% |
| ATCTGCAAGCAAATGGGACA+AGG | + | chr4_1:86800705-86800724 | Msa0581430:intron | 45.0% | |
| !! | CTTGGTCAATGGTTTTCAGG+TGG | + | chr4_1:86801148-86801167 | Msa0581430:CDS | 45.0% |
| !!! | GTCAATGGTTTTCAGGTGGA+TGG | + | chr4_1:86801152-86801171 | Msa0581430:CDS | 45.0% |
| ! | TGAGTGACTGGTTGTCATAC+AGG | + | chr4_1:86801178-86801197 | Msa0581430:CDS | 45.0% |
| !!! | TGGCTGTTTTTTAGGGCTAC+TGG | + | chr4_1:86801278-86801297 | Msa0581430:intron | 45.0% |
| TGACATACTGCATGTGAGCA+TGG | - | chr4_1:86801355-86801374 | None:intergenic | 45.0% | |
| ACCCACAAGCTTCCATATCT+CGG | - | chr4_1:86801391-86801410 | None:intergenic | 45.0% | |
| AGATATGGAAGCTTGTGGGT+GGG | + | chr4_1:86801391-86801410 | Msa0581430:intron | 45.0% | |
| ! | TGGGTGGGATGATGAGTTTT+GGG | + | chr4_1:86801406-86801425 | Msa0581430:intron | 45.0% |
| GGTTTGGGTGATCTTGTTGA+AGG | + | chr4_1:86801437-86801456 | Msa0581430:intron | 45.0% | |
| !! | GTTCAAGAGGCACTTTCATC+CGG | - | chr4_1:86801589-86801608 | None:intergenic | 45.0% |
| ! | TATGAGAACGATGGGTTTGG+AGG | + | chr4_1:86801662-86801681 | Msa0581430:intron | 45.0% |
| ! | ATGAGAACGATGGGTTTGGA+GGG | + | chr4_1:86801663-86801682 | Msa0581430:intron | 45.0% |
| TTGTGCCAGGAATTCCTGTT+GGG | + | chr4_1:86802611-86802630 | Msa0581430:CDS | 45.0% | |
| TTGATTGATGCTCATGCTGG+TGG | + | chr4_1:86802640-86802659 | Msa0581430:CDS | 45.0% | |
| CAACCTTCAGTTTCTGATGG+GGG | - | chr4_1:86802688-86802707 | None:intergenic | 45.0% | |
| GGACAACCTTCAGTTTCTGA+TGG | - | chr4_1:86802691-86802710 | None:intergenic | 45.0% | |
| CGTATCCTCAGAGAATGACA+AGG | + | chr4_1:86802782-86802801 | Msa0581430:intron | 45.0% | |
| TGCTTCCTTGTCATTCTCTG+AGG | - | chr4_1:86802790-86802809 | None:intergenic | 45.0% | |
| GGAAGCAATTTGCAACCGTA+TGG | + | chr4_1:86802803-86802822 | Msa0581430:CDS | 45.0% | |
| CATGTCATATGGCTGTATCC+CGG | + | chr4_1:86802847-86802866 | Msa0581430:CDS | 45.0% | |
| CGGAGCAAATTGTTCATTCC+TGG | + | chr4_1:86802867-86802886 | Msa0581430:CDS | 45.0% | |
| TGTTCATTCCTGGGATTTGG+GGG | + | chr4_1:86802877-86802896 | Msa0581430:CDS | 45.0% | |
| TTTACTCTGGGTAGCTACCA+TGG | + | chr4_1:86803006-86803025 | Msa0581430:intron | 45.0% | |
| AAGTCAGATACTAGAGGCAG+AGG | + | chr4_1:86803120-86803139 | Msa0581430:intron | 45.0% | |
| !! | ACTAAGTGGGGTTGGCTATA+TGG | - | chr4_1:86803248-86803267 | None:intergenic | 45.0% |
| ATATAGCCAACCCCACTTAG+TGG | + | chr4_1:86803247-86803266 | Msa0581430:intron | 45.0% | |
| TATAGCCAACCCCACTTAGT+GGG | + | chr4_1:86803248-86803267 | Msa0581430:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4_1:86803260-86803279 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4_1:86803261-86803280 | None:intergenic | 45.0% |
| !! | GGCTTGGTTGTTGTTGTTTG+TGG | + | chr4_1:86803275-86803294 | Msa0581430:intron | 45.0% |
| !! | AAGTAGGAGGTATCTGACAC+TGG | + | chr4_1:86803505-86803524 | Msa0581430:intron | 45.0% |
| TGGACACTGAACAGGTTATC+AGG | - | chr4_1:86803544-86803563 | None:intergenic | 45.0% | |
| GAAGAGAATGGACACTGAAC+AGG | - | chr4_1:86803552-86803571 | None:intergenic | 45.0% | |
| ! | GAGTGCTACTGGTGCATTAT+TGG | + | chr4_1:86803698-86803717 | Msa0581430:CDS | 45.0% |
| TAGAGCTGCTTCCCAAAGTA+AGG | + | chr4_1:86803764-86803783 | Msa0581430:intron | 45.0% | |
| TGAGCTTCTGAACAAGCTCT+TGG | + | chr4_1:86803900-86803919 | Msa0581430:CDS | 45.0% | |
| TCTATACCTAGCAACTGTGC+AGG | + | chr4_1:86804167-86804186 | Msa0581430:CDS | 45.0% | |
| CTATACCTAGCAACTGTGCA+GGG | + | chr4_1:86804168-86804187 | Msa0581430:CDS | 45.0% | |
| !! | GTAGAGCATTGTAATGCCCA+TGG | + | chr4_1:86804216-86804235 | Msa0581430:CDS | 45.0% |
| ATGCCCATGGTCACAAAGTA+AGG | + | chr4_1:86804229-86804248 | Msa0581430:intron | 45.0% | |
| GCATCCTTACTTTGTGACCA+TGG | - | chr4_1:86804236-86804255 | None:intergenic | 45.0% | |
| CAGTGGGTGTAAACGTGAAA+TGG | - | chr4_1:86804377-86804396 | None:intergenic | 45.0% | |
| TGTTCTTTGTCCTTTGCCTC+TGG | + | chr4_1:86804923-86804942 | Msa0581430:intron | 45.0% | |
| GACCTGGAGATTCTGTAGTA+AGG | - | chr4_1:86804980-86804999 | None:intergenic | 45.0% | |
| ! | TAGGTGGTTTGGGAATGTGT+GGG | - | chr4_1:86805006-86805025 | None:intergenic | 45.0% |
| ! | TTAGGTGGTTTGGGAATGTG+TGG | - | chr4_1:86805007-86805026 | None:intergenic | 45.0% |
| GAATCTCGTCTTAGGTGGTT+TGG | - | chr4_1:86805017-86805036 | None:intergenic | 45.0% | |
| TGGTTGAATCTCGTCTTAGG+TGG | - | chr4_1:86805022-86805041 | None:intergenic | 45.0% | |
| GTAAGCGATGTTGTATGGGA+CGG | - | chr4_1:86805195-86805214 | None:intergenic | 45.0% | |
| ATGAAATGAAGGAGCCCCTT+GGG | - | chr4_1:86805276-86805295 | None:intergenic | 45.0% | |
| TCAACCTTGCTTGAATCCGA+TGG | + | chr4_1:86805295-86805314 | Msa0581430:intron | 45.0% | |
| ACGAACCAATCCACAGTTCA+AGG | + | chr4_1:86805404-86805423 | Msa0581430:intron | 45.0% | |
| CACGGTGATTCCTCATCATT+TGG | - | chr4_1:86805618-86805637 | None:intergenic | 45.0% | |
| CAAATGATGAGGAATCACCG+TGG | + | chr4_1:86805616-86805635 | Msa0581430:intron | 45.0% | |
| ! | TAGACTTGTTTGACCGTCCA+CGG | - | chr4_1:86805636-86805655 | None:intergenic | 45.0% |
| CTGCCCTGTAATTCTTCCAA+GGG | + | chr4_1:86805764-86805783 | Msa0581430:CDS | 45.0% | |
| AGCACAGATTCACTTTCCCT+TGG | - | chr4_1:86805783-86805802 | None:intergenic | 45.0% | |
| GGAAAGTGAATCTGTGCTCT+TGG | + | chr4_1:86805785-86805804 | Msa0581430:CDS | 45.0% | |
| GTGGCGCATTTACAAGACTA+TGG | - | chr4_1:86806308-86806327 | None:intergenic | 45.0% | |
| ! | TAAGGTGCATGGATTGTTGC+AGG | + | chr4_1:86806558-86806577 | Msa0581430:intron | 45.0% |
| GCTGTTGTTCATAAAGGCCA+CGG | - | chr4_1:86806645-86806664 | None:intergenic | 45.0% | |
| GCTCTCTAATCGTTCTGTGA+TGG | + | chr4_1:86806663-86806682 | Msa0581430:CDS | 45.0% | |
| TAATCGTTCTGTGATGGCTC+AGG | + | chr4_1:86806669-86806688 | Msa0581430:CDS | 45.0% | |
| AGCAGCATAGTGATACCGTA+TGG | + | chr4_1:86806904-86806923 | Msa0581430:three_prime_UTR | 45.0% | |
| AAGATGGAGCGAGAAGCAGA+AGG | - | chr4_1:86799824-86799843 | None:intergenic | 50.0% | |
| ! | GCAGGCTTGTTTGATGAGGA+AGG | + | chr4_1:86799964-86799983 | Msa0581430:intron | 50.0% |
| CTAGCAGCCCGATACAGATA+TGG | + | chr4_1:86800004-86800023 | Msa0581430:CDS | 50.0% | |
| !! | GGTAACTTGTTTGGGAGTGG+TGG | + | chr4_1:86800047-86800066 | Msa0581430:intron | 50.0% |
| CCCAGACTCTGTACTTCTGT+AGG | - | chr4_1:86800247-86800266 | None:intergenic | 50.0% | |
| TTCCGACAGCTCACCTGTTT+CGG | + | chr4_1:86800393-86800412 | Msa0581430:CDS | 50.0% | |
| AACCGAAACAGGTGAGCTGT+CGG | - | chr4_1:86800398-86800417 | None:intergenic | 50.0% | |
| GCTCACCTGTTTCGGTTTCT+CGG | + | chr4_1:86800401-86800420 | Msa0581430:CDS | 50.0% | |
| GAGCTGTAGACCAAGCTGAA+AGG | + | chr4_1:86800467-86800486 | Msa0581430:CDS | 50.0% | |
| ! | GGTGGATGGATTTGAGTGAC+TGG | + | chr4_1:86801166-86801185 | Msa0581430:CDS | 50.0% |
| TCCCGAGATATGGAAGCTTG+TGG | + | chr4_1:86801386-86801405 | Msa0581430:CDS | 50.0% | |
| CCCACAAGCTTCCATATCTC+GGG | - | chr4_1:86801390-86801409 | None:intergenic | 50.0% | |
| CCCGAGATATGGAAGCTTGT+GGG | + | chr4_1:86801387-86801406 | Msa0581430:CDS | 50.0% | |
| GAGATATGGAAGCTTGTGGG+TGG | + | chr4_1:86801390-86801409 | Msa0581430:intron | 50.0% | |
| ! | GTGGGTGGGATGATGAGTTT+TGG | + | chr4_1:86801405-86801424 | Msa0581430:intron | 50.0% |
| !!! | GTGGGATGATGAGTTTTGGG+AGG | + | chr4_1:86801409-86801428 | Msa0581430:intron | 50.0% |
| TCTCAACACGCTGTCTATGC+CGG | + | chr4_1:86801567-86801586 | Msa0581430:intron | 50.0% | |
| ! | TGAGAACGATGGGTTTGGAG+GGG | + | chr4_1:86801664-86801683 | Msa0581430:intron | 50.0% |
| ATTCTTGCCTTCGCTGCAGT+AGG | - | chr4_1:86802381-86802400 | None:intergenic | 50.0% | |
| TGGGACAAATTCCTGTGACG+CGG | + | chr4_1:86802542-86802561 | Msa0581430:intron | 50.0% | |
| CTTGTGCCAGGAATTCCTGT+TGG | + | chr4_1:86802610-86802629 | Msa0581430:CDS | 50.0% | |
| GATGTCCCAACAGGAATTCC+TGG | - | chr4_1:86802619-86802638 | None:intergenic | 50.0% | |
| TTGCCCCCATCAGAAACTGA+AGG | + | chr4_1:86802682-86802701 | Msa0581430:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+TGG | - | chr4_1:86803256-86803275 | None:intergenic | 50.0% | |
| CAACCCCACTTAGTGGGATA+AGG | + | chr4_1:86803254-86803273 | Msa0581430:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4_1:86803262-86803281 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4_1:86803259-86803278 | Msa0581430:intron | 50.0% | |
| CAAGGTGTATAGAACCGGCA+TGG | - | chr4_1:86803740-86803759 | None:intergenic | 50.0% | |
| GGGAAGCAGCTCTATTTGCA+AGG | - | chr4_1:86803758-86803777 | None:intergenic | 50.0% | |
| ! | TCAGGGCGCCTATAAAGGTT+TGG | - | chr4_1:86803948-86803967 | None:intergenic | 50.0% |
| ! | TTCAGTCAGGGCGCCTATAA+AGG | - | chr4_1:86803953-86803972 | None:intergenic | 50.0% |
| GCTGCTATATATCTTGGCCC+AGG | + | chr4_1:86804067-86804086 | Msa0581430:intron | 50.0% | |
| !! | ACTGTGCAGGGCATTGCATA+TGG | + | chr4_1:86804180-86804199 | Msa0581430:CDS | 50.0% |
| !! | GCTGTTGATGCAGCGTTGAT+GGG | + | chr4_1:86804500-86804519 | Msa0581430:intron | 50.0% |
| GGTTGCATGGGTGTCTAGTT+TGG | + | chr4_1:86804759-86804778 | Msa0581430:intron | 50.0% | |
| CAACCAAGCCTTAACCCACT+AGG | + | chr4_1:86804794-86804813 | Msa0581430:intron | 50.0% | |
| CAAGCCTTAACCCACTAGGT+GGG | + | chr4_1:86804798-86804817 | Msa0581430:intron | 50.0% | |
| AAGCCTTAACCCACTAGGTG+GGG | + | chr4_1:86804799-86804818 | Msa0581430:intron | 50.0% | |
| TTTAGCCAACCCCACCTAGT+GGG | - | chr4_1:86804811-86804830 | None:intergenic | 50.0% | |
| ATTTAGCCAACCCCACCTAG+TGG | - | chr4_1:86804812-86804831 | None:intergenic | 50.0% | |
| TGTCCTTTGCCTCTGGCAAT+TGG | + | chr4_1:86804930-86804949 | Msa0581430:intron | 50.0% | |
| GTCCTTTGCCTCTGGCAATT+GGG | + | chr4_1:86804931-86804950 | Msa0581430:intron | 50.0% | |
| AACCCAATTGCCAGAGGCAA+AGG | - | chr4_1:86804936-86804955 | None:intergenic | 50.0% | |
| GAGGATAACCCAATTGCCAG+AGG | - | chr4_1:86804942-86804961 | None:intergenic | 50.0% | |
| ! | AGGTGGTTTGGGAATGTGTG+GGG | - | chr4_1:86805005-86805024 | None:intergenic | 50.0% |
| ! | GTTGTATGGGACGGAGCATT+GGG | - | chr4_1:86805186-86805205 | None:intergenic | 50.0% |
| TGTTGTATGGGACGGAGCAT+TGG | - | chr4_1:86805187-86805206 | None:intergenic | 50.0% | |
| TGAAATGAAGGAGCCCCTTG+GGG | - | chr4_1:86805275-86805294 | None:intergenic | 50.0% | |
| GATGAAATGAAGGAGCCCCT+TGG | - | chr4_1:86805277-86805296 | None:intergenic | 50.0% | |
| TGATGAGGAATCACCGTGGA+CGG | + | chr4_1:86805620-86805639 | Msa0581430:intron | 50.0% | |
| GAAGAATTACAGGGCAGCCT+AGG | - | chr4_1:86805761-86805780 | None:intergenic | 50.0% | |
| GCTGCCCTGTAATTCTTCCA+AGG | + | chr4_1:86805763-86805782 | Msa0581430:CDS | 50.0% | |
| !! | CTCTTGGGTGCTGCTATTCT+GGG | + | chr4_1:86805801-86805820 | Msa0581430:CDS | 50.0% |
| AGCTGCATTCAGGGCTTTCA+TGG | - | chr4_1:86805865-86805884 | None:intergenic | 50.0% | |
| ATGAAAGCCCTGAATGCAGC+TGG | + | chr4_1:86805864-86805883 | Msa0581430:CDS | 50.0% | |
| ! | AGTCTTGTAAATGCGCCACC+AGG | + | chr4_1:86806309-86806328 | Msa0581430:intron | 50.0% |
| ! | CGAGAAGCAGAAGGTTCGGT+GGG | - | chr4_1:86799815-86799834 | None:intergenic | 55.0% |
| GGAGCGAGAAGCAGAAGGTT+CGG | - | chr4_1:86799819-86799838 | None:intergenic | 55.0% | |
| GCTTCTCGCTCCATCTTCCT+CGG | + | chr4_1:86799827-86799846 | Msa0581430:CDS | 55.0% | |
| CCACTCCGAGAAACCGAAAC+AGG | - | chr4_1:86800409-86800428 | None:intergenic | 55.0% | |
| CCTGTTTCGGTTTCTCGGAG+TGG | + | chr4_1:86800406-86800425 | Msa0581430:CDS | 55.0% | |
| ! | GAGAACGATGGGTTTGGAGG+GGG | + | chr4_1:86801665-86801684 | Msa0581430:intron | 55.0% |
| GTGCAGATGCATGCTCGTGT+AGG | - | chr4_1:86801838-86801857 | None:intergenic | 55.0% | |
| ATGCTCGACCGGTCGAAACT+TGG | + | chr4_1:86802212-86802231 | Msa0581430:intron | 55.0% | |
| TGCTCGACCGGTCGAAACTT+GGG | + | chr4_1:86802213-86802232 | Msa0581430:intron | 55.0% | |
| GCTTTCCCTGGCCATCCTTT+GGG | + | chr4_1:86802342-86802361 | Msa0581430:CDS | 55.0% | |
| CAGAACCCAAAGGATGGCCA+GGG | - | chr4_1:86802350-86802369 | None:intergenic | 55.0% | |
| CAAGGCCAGAACCCAAAGGA+TGG | - | chr4_1:86802356-86802375 | None:intergenic | 55.0% | |
| ACAAATTCCTGTGACGCGGC+TGG | + | chr4_1:86802546-86802565 | Msa0581430:intron | 55.0% | |
| ATCAAAACCAGCCGCGTCAC+AGG | - | chr4_1:86802556-86802575 | None:intergenic | 55.0% | |
| !! | ATTTGGGGGCCGTTTTGGTC+AGG | + | chr4_1:86802891-86802910 | Msa0581430:CDS | 55.0% |
| CAATGCCCTGCACAGTTGCT+AGG | - | chr4_1:86804176-86804195 | None:intergenic | 55.0% | |
| ! | GGCTGTTGATGCAGCGTTGA+TGG | + | chr4_1:86804499-86804518 | Msa0581430:intron | 55.0% |
| !! | CCACCTAGTGGGTTAAGGCT+TGG | - | chr4_1:86804800-86804819 | None:intergenic | 55.0% |
| CCAAGCCTTAACCCACTAGG+TGG | + | chr4_1:86804797-86804816 | Msa0581430:intron | 55.0% | |
| !! | CAACCCCACCTAGTGGGTTA+AGG | - | chr4_1:86804805-86804824 | None:intergenic | 55.0% |
| CTTAACCCACTAGGTGGGGT+TGG | + | chr4_1:86804803-86804822 | Msa0581430:intron | 55.0% | |
| GAAATGAAGGAGCCCCTTGG+GGG | - | chr4_1:86805274-86805293 | None:intergenic | 55.0% | |
| !! | GCTCTTGGGTGCTGCTATTC+TGG | + | chr4_1:86805800-86805819 | Msa0581430:CDS | 55.0% |
| CACCTGACCAGCTGCATTCA+GGG | - | chr4_1:86805874-86805893 | None:intergenic | 55.0% | |
| ACACCTGACCAGCTGCATTC+AGG | - | chr4_1:86805875-86805894 | None:intergenic | 55.0% | |
| TGAATGCAGCTGGTCAGGTG+TGG | + | chr4_1:86805874-86805893 | Msa0581430:intron | 55.0% | |
| TTCTGTGATGGCTCAGGCGT+TGG | + | chr4_1:86806675-86806694 | Msa0581430:CDS | 55.0% | |
| !! | CTCAGGCGTTGGCATAGCAA+AGG | + | chr4_1:86806686-86806705 | Msa0581430:exon | 55.0% |
| !! | AGCAGAAGGTTCGGTGGGAG+AGG | - | chr4_1:86799810-86799829 | None:intergenic | 60.0% |
| GCGAGAAGCAGAAGGTTCGG+TGG | - | chr4_1:86799816-86799835 | None:intergenic | 60.0% | |
| !! | ATCTTCCTCGGCGTCGACGT+CGG | + | chr4_1:86799839-86799858 | Msa0581430:CDS | 60.0% |
| ! | AACGATGGGTTTGGAGGGGG+TGG | + | chr4_1:86801668-86801687 | Msa0581430:intron | 60.0% |
| ! | ACGATGGGTTTGGAGGGGGT+GGG | + | chr4_1:86801669-86801688 | Msa0581430:intron | 60.0% |
| GCTCGACCGGTCGAAACTTG+GGG | + | chr4_1:86802214-86802233 | Msa0581430:intron | 60.0% | |
| AGCCTGCCCCAAGTTTCGAC+CGG | - | chr4_1:86802223-86802242 | None:intergenic | 60.0% | |
| CGCTTTCCCTGGCCATCCTT+TGG | + | chr4_1:86802341-86802360 | Msa0581430:CDS | 60.0% | |
| CCAGAACCCAAAGGATGGCC+AGG | - | chr4_1:86802351-86802370 | None:intergenic | 60.0% | |
| ! | CCTGGCCATCCTTTGGGTTC+TGG | + | chr4_1:86802348-86802367 | Msa0581430:CDS | 60.0% |
| GGAGCAAGGCCAGAACCCAA+AGG | - | chr4_1:86802360-86802379 | None:intergenic | 60.0% | |
| CCTTCGCTGCAGTAGGAGCA+AGG | - | chr4_1:86802374-86802393 | None:intergenic | 60.0% | |
| CCTTGCTCCTACTGCAGCGA+AGG | + | chr4_1:86802371-86802390 | Msa0581430:CDS | 60.0% | |
| ! | CAGGAACTGGGTCTTGTGCC+AGG | + | chr4_1:86802598-86802617 | Msa0581430:intron | 60.0% |
| ! | TGATGCTCATGCTGGTGGCG+TGG | + | chr4_1:86802645-86802664 | Msa0581430:CDS | 60.0% |
| ! | GATGCTCATGCTGGTGGCGT+GGG | + | chr4_1:86802646-86802665 | Msa0581430:CDS | 60.0% |
| ! | ATGCTCATGCTGGTGGCGTG+GGG | + | chr4_1:86802647-86802666 | Msa0581430:CDS | 60.0% |
| CAAAACGGCCCCCAAATCCC+AGG | - | chr4_1:86802888-86802907 | None:intergenic | 60.0% | |
| ! | CTGGGATTTGGGGGCCGTTT+TGG | + | chr4_1:86802886-86802905 | Msa0581430:CDS | 60.0% |
| GGGTCTGCAATGGGAGACCT+GGG | - | chr4_1:86804087-86804106 | None:intergenic | 60.0% | |
| TGGGTCTGCAATGGGAGACC+TGG | - | chr4_1:86804088-86804107 | None:intergenic | 60.0% | |
| GGGAATGTGTGGGGTAGACC+TGG | - | chr4_1:86804996-86805015 | None:intergenic | 60.0% | |
| !! | GTATGGGACGGAGCATTGGG+CGG | - | chr4_1:86805183-86805202 | None:intergenic | 60.0% |
| GGGCTTTCATGGCCTCCCTA+AGG | - | chr4_1:86805854-86805873 | None:intergenic | 60.0% | |
| AGCCCTGAATGCAGCTGGTC+AGG | + | chr4_1:86805869-86805888 | Msa0581430:CDS | 60.0% | |
| GACGTCGACGCCGAGGAAGA+TGG | - | chr4_1:86799840-86799859 | None:intergenic | 65.0% | |
| ! | CGATGGGTTTGGAGGGGGTG+GGG | + | chr4_1:86801670-86801689 | Msa0581430:intron | 65.0% |
| ! | GATGGGTTTGGAGGGGGTGG+GGG | + | chr4_1:86801671-86801690 | Msa0581430:intron | 65.0% |
| GACCGGTCGAAACTTGGGGC+AGG | + | chr4_1:86802218-86802237 | Msa0581430:intron | 65.0% | |
| !! | GGGCGAAGTGTCGCTTTCCC+TGG | + | chr4_1:86802330-86802349 | Msa0581430:intron | 65.0% |
| ! | TGCTCATGCTGGTGGCGTGG+GGG | + | chr4_1:86802648-86802667 | Msa0581430:CDS | 65.0% |
| ! | GAAGGCGGGCAGAGTGCTAC+TGG | + | chr4_1:86803687-86803706 | Msa0581430:CDS | 65.0% |
| CTCAGGCTTGCACTGCCTGG+TGG | - | chr4_1:86806327-86806346 | None:intergenic | 65.0% | |
| CCTCTCAGGCTTGCACTGCC+TGG | - | chr4_1:86806330-86806349 | None:intergenic | 65.0% | |
| CCAGGCAGTGCAAGCCTGAG+AGG | + | chr4_1:86806327-86806346 | Msa0581430:intron | 65.0% | |
| GGTTTGGAGGGGGTGGGGGT+GGG | + | chr4_1:86801675-86801694 | Msa0581430:intron | 70.0% | |
| !! | CTCGGCGTCGACGTCGGCAC+CGG | + | chr4_1:86799845-86799864 | Msa0581430:CDS | 75.0% |
| ! | TGGACCAGCGCGAGCGCTGC+CGG | - | chr4_1:86799867-86799886 | None:intergenic | 75.0% |
| GGGTTTGGAGGGGGTGGGGG+TGG | + | chr4_1:86801674-86801693 | Msa0581430:intron | 75.0% | |
| !!! | CGGTGCCGACGTCGACGCCG+AGG | - | chr4_1:86799847-86799866 | None:intergenic | 80.0% |
| !!! | GGCACCGGCAGCGCTCGCGC+TGG | + | chr4_1:86799860-86799879 | Msa0581430:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 86799641 | 86806990 | 86799641 | ID=Msa0581430;Name=Msa0581430 |
| chr4_1 | mRNA | 86799641 | 86806990 | 86799641 | ID=Msa0581430-mRNA-1;Parent=Msa0581430;Name=Msa0581430-mRNA-1;_AED=0.13;_eAED=0.13;_QI=137|0.86|0.87|1|0.93|0.93|16|288|566 |
| chr4_1 | exon | 86799641 | 86799777 | 86799641 | ID=Msa0581430-mRNA-1:exon:32198;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86799803 | 86799881 | 86799803 | ID=Msa0581430-mRNA-1:exon:32199;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86799968 | 86800047 | 86799968 | ID=Msa0581430-mRNA-1:exon:32200;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86800172 | 86800289 | 86800172 | ID=Msa0581430-mRNA-1:exon:32201;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86800383 | 86800561 | 86800383 | ID=Msa0581430-mRNA-1:exon:32202;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86801117 | 86801199 | 86801117 | ID=Msa0581430-mRNA-1:exon:32203;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86801292 | 86801408 | 86801292 | ID=Msa0581430-mRNA-1:exon:32204;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86802331 | 86802430 | 86802331 | ID=Msa0581430-mRNA-1:exon:32205;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86802601 | 86802703 | 86802601 | ID=Msa0581430-mRNA-1:exon:32206;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86802793 | 86802912 | 86802793 | ID=Msa0581430-mRNA-1:exon:32207;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86803661 | 86803780 | 86803661 | ID=Msa0581430-mRNA-1:exon:32208;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86803887 | 86804007 | 86803887 | ID=Msa0581430-mRNA-1:exon:32209;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86804089 | 86804245 | 86804089 | ID=Msa0581430-mRNA-1:exon:32210;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86804556 | 86804628 | 86804556 | ID=Msa0581430-mRNA-1:exon:32211;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86805763 | 86805890 | 86805763 | ID=Msa0581430-mRNA-1:exon:32212;Parent=Msa0581430-mRNA-1 |
| chr4_1 | exon | 86806580 | 86806990 | 86806580 | ID=Msa0581430-mRNA-1:exon:32213;Parent=Msa0581430-mRNA-1 |
| chr4_1 | five_prime_UTR | 86799641 | 86799777 | 86799641 | ID=Msa0581430-mRNA-1:five_prime_utr;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86799803 | 86799881 | 86799803 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86799968 | 86800047 | 86799968 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86800172 | 86800289 | 86800172 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86800383 | 86800561 | 86800383 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86801117 | 86801199 | 86801117 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86801292 | 86801408 | 86801292 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86802331 | 86802430 | 86802331 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86802601 | 86802703 | 86802601 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86802793 | 86802912 | 86802793 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86803661 | 86803780 | 86803661 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86803887 | 86804007 | 86803887 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86804089 | 86804245 | 86804089 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86804556 | 86804628 | 86804556 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86805763 | 86805890 | 86805763 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | CDS | 86806580 | 86806702 | 86806580 | ID=Msa0581430-mRNA-1:cds;Parent=Msa0581430-mRNA-1 |
| chr4_1 | three_prime_UTR | 86806703 | 86806990 | 86806703 | ID=Msa0581430-mRNA-1:three_prime_utr;Parent=Msa0581430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
