AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0592300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0592300 MtrunA17_Chr4g0010221 79.058 573 119 1 1 573 371 942 0.0 902
Msa0592300 MtrunA17_Chr4g0009781 77.526 574 126 2 1 573 371 942 0.0 895
Msa0592300 MtrunA17_Chr4g0010251 79.443 574 112 3 1 573 371 939 0.0 892
Msa0592300 MtrunA17_Chr4g0010201 77.217 575 127 4 1 573 371 943 0.0 864
Msa0592300 MtrunA17_Chr4g0010261 74.740 578 136 6 2 573 372 945 0.0 822
Msa0592300 MtrunA17_Chr4g0010481 76.243 181 42 1 89 268 1 181 9.49e-90 275
Msa0592300 MtrunA17_Chr3g0082811 40.647 433 217 14 3 422 372 777 6.78e-83 276
Msa0592300 MtrunA17_Chr2g0316291 34.774 532 313 14 2 520 386 896 4.85e-82 278
Msa0592300 MtrunA17_Chr3g0082881 38.559 472 243 13 1 444 370 822 1.42e-81 273
Msa0592300 MtrunA17_Chr3g0082891 38.158 456 240 10 3 436 372 807 3.88e-80 269
Msa0592300 MtrunA17_Chr3g0082871 44.412 340 168 9 3 339 372 693 5.55e-77 258
Msa0592300 MtrunA17_Chr5g0410301 32.581 620 335 19 20 573 353 955 2.82e-72 249
Msa0592300 MtrunA17_Chr8g0352861 35.206 534 304 20 5 525 396 900 3.34e-70 246
Msa0592300 MtrunA17_Chr5g0410351 33.876 614 330 17 22 573 367 966 6.10e-69 241
Msa0592300 MtrunA17_Chr5g0410261 32.161 597 339 18 33 572 401 988 9.45e-66 232
Msa0592300 MtrunA17_Chr5g0410161 31.188 606 336 19 33 572 523 1113 2.74e-64 229
Msa0592300 MtrunA17_Chr8g0352831 36.682 428 242 13 5 421 400 809 1.77e-63 226
Msa0592300 MtrunA17_Chr3g0083751 32.929 495 307 14 19 506 407 883 1.46e-62 223
Msa0592300 MtrunA17_Chr3g0083721 32.544 507 314 15 6 506 335 819 2.84e-62 221
Msa0592300 MtrunA17_Chr3g0083621 32.353 578 348 19 19 575 413 968 4.33e-62 222
Msa0592300 MtrunA17_Chr1g0164611 36.049 405 239 13 24 419 410 803 5.80e-62 221
Msa0592300 MtrunA17_Chr3g0089541 31.034 609 346 22 5 564 395 978 6.59e-62 222
Msa0592300 MtrunA17_Chr3g0085651 30.120 581 368 21 3 573 379 931 7.62e-62 221
Msa0592300 MtrunA17_Chr5g0410481 30.629 604 350 14 33 573 356 953 5.47e-61 218
Msa0592300 MtrunA17_Chr3g0086091 31.530 536 329 18 3 515 181 701 9.65e-61 217
Msa0592300 MtrunA17_Chr4g0008461 33.203 512 316 15 1 506 368 859 1.01e-60 218
Msa0592300 MtrunA17_Chr3g0086221 31.698 530 329 18 3 522 369 875 2.61e-60 217
Msa0592300 MtrunA17_Chr3g0082131 33.137 510 298 17 24 512 405 892 3.48e-60 216
Msa0592300 MtrunA17_Chr3g0086161 31.860 543 327 20 3 520 370 894 5.16e-60 216
Msa0592300 MtrunA17_Chr6g0456131 29.750 521 341 14 22 533 398 902 7.60e-60 215
Msa0592300 MtrunA17_Chr3g0089501 32.087 508 314 15 1 497 385 872 1.08e-59 213
Msa0592300 MtrunA17_Chr3g0090651 34.813 428 247 16 1 419 387 791 1.68e-59 214
Msa0592300 MtrunA17_Chr3g0084051 33.333 516 302 19 5 512 390 871 1.82e-59 214
Msa0592300 MtrunA17_Chr8g0356251 31.102 508 320 16 6 506 418 902 2.03e-59 214
Msa0592300 MtrunA17_Chr3g0089601 34.906 424 251 13 1 419 385 788 4.93e-59 212
Msa0592300 MtrunA17_Chr3g0087701 33.148 540 320 19 5 520 374 896 7.64e-59 213
Msa0592300 MtrunA17_Chr8g0348931 31.173 571 347 20 1 553 395 937 1.50e-58 212
Msa0592300 MtrunA17_Chr3g0091081 34.353 425 251 15 1 419 387 789 1.63e-58 212
Msa0592300 MtrunA17_Chr6g0484551 34.824 425 252 13 1 420 361 765 1.87e-58 209
Msa0592300 MtrunA17_Chr2g0309721 30.651 584 348 19 5 554 391 951 2.32e-58 211
Msa0592300 MtrunA17_Chr3g0083641 31.950 482 303 14 32 506 391 854 6.19e-58 210
Msa0592300 MtrunA17_Chr3g0092241 30.669 613 344 22 5 564 391 975 6.51e-58 209
Msa0592300 MtrunA17_Chr3g0091061 34.112 428 250 16 1 419 387 791 6.97e-58 210
Msa0592300 MtrunA17_Chr3g0089211 30.478 607 352 20 5 564 438 1021 8.36e-58 209
Msa0592300 MtrunA17_Chr3g0082391 35.049 408 243 13 19 419 402 794 1.08e-57 207
Msa0592300 MtrunA17_Chr3g0086071 33.990 406 248 11 20 420 6 396 1.22e-57 204
Msa0592300 MtrunA17_Chr3g0083681 31.405 484 307 14 29 506 389 853 1.97e-57 208
Msa0592300 MtrunA17_Chr3g0089651 33.630 449 271 14 5 446 395 823 2.03e-57 208
Msa0592300 MtrunA17_Chr3g0089871 29.535 623 360 26 1 568 387 985 2.15e-57 208
Msa0592300 MtrunA17_Chr1g0164581 33.137 510 298 17 24 512 381 868 2.85e-57 208
Msa0592300 MtrunA17_Chr3g0082791 32.353 544 311 22 3 520 390 902 4.85e-57 207
Msa0592300 MtrunA17_Chr5g0414311 33.779 524 292 23 2 510 385 868 5.17e-57 207
Msa0592300 MtrunA17_Chr3g0087581 30.755 543 327 19 5 520 375 895 8.04e-57 206
Msa0592300 MtrunA17_Chr3g0089781 29.460 611 355 22 5 564 391 976 1.57e-56 205
Msa0592300 MtrunA17_Chr5g0431051 31.633 588 344 23 2 575 377 920 1.74e-56 205
Msa0592300 MtrunA17_Chr3g0082321 36.111 396 228 14 31 419 360 737 2.37e-56 203
Msa0592300 MtrunA17_Chr3g0089991 33.408 449 272 15 5 446 395 823 2.84e-56 205
Msa0592300 MtrunA17_Chr5g0410401 33.042 572 338 20 33 575 253 808 3.58e-56 202
Msa0592300 MtrunA17_Chr7g0244231 30.277 578 351 20 2 568 371 907 4.93e-56 204
Msa0592300 MtrunA17_Chr3g0086151 31.321 530 323 18 5 511 372 883 5.77e-56 202
Msa0592300 MtrunA17_Chr3g0091121 31.262 515 313 19 22 520 17 506 7.42e-56 200
Msa0592300 MtrunA17_Chr3g0091011 31.845 515 324 15 6 512 355 850 7.45e-56 203
Msa0592300 MtrunA17_Chr3g0082351 31.397 551 341 20 31 573 412 933 1.01e-55 203
Msa0592300 MtrunA17_Chr3g0082311 36.616 396 226 14 31 419 414 791 1.83e-55 202
Msa0592300 MtrunA17_Chr3g0086181 30.303 528 331 17 5 522 372 872 2.65e-55 201
Msa0592300 MtrunA17_Chr3g0084031 32.044 543 320 22 3 520 390 908 2.99e-55 202
Msa0592300 MtrunA17_Chr3g0089251 30.784 536 329 17 5 528 420 925 3.11e-55 202
Msa0592300 MtrunA17_Chr3g0085131 31.716 536 328 17 5 520 373 890 3.35e-55 202
Msa0592300 MtrunA17_Chr5g0417251 33.077 520 301 21 2 510 146 629 3.48e-55 197
Msa0592300 MtrunA17_Chr3g0092261 29.739 612 358 21 1 564 432 1019 3.98e-55 202
Msa0592300 MtrunA17_Chr3g0090141 31.352 488 302 15 2 476 388 855 6.54e-55 201
Msa0592300 MtrunA17_Chr3g0086621 33.254 421 264 11 3 420 370 776 7.11e-55 201
Msa0592300 MtrunA17_Chr2g0282991 32.314 523 308 18 5 512 388 879 7.24e-55 201
Msa0592300 MtrunA17_Chr3g0090691 34.346 428 248 18 1 419 387 790 9.73e-55 201
Msa0592300 MtrunA17_Chr3g0083591 32.573 482 298 15 32 506 380 841 1.01e-54 200
Msa0592300 MtrunA17_Chr4g0025391 34.043 423 251 16 1 417 386 786 1.23e-54 200
Msa0592300 MtrunA17_Chr3g0080871 31.873 502 311 15 15 506 383 863 1.36e-54 200
Msa0592300 MtrunA17_Chr1g0164391 30.906 563 338 21 31 573 414 945 2.02e-54 199
Msa0592300 MtrunA17_Chr3g0084811 32.587 491 305 14 22 506 556 1026 2.20e-54 199
Msa0592300 MtrunA17_Chr3g0090431 31.148 488 303 15 2 476 260 727 3.19e-54 199
Msa0592300 MtrunA17_Chr5g0415471 32.296 514 312 18 2 510 383 865 3.96e-54 199
Msa0592300 MtrunA17_Chr3g0085561 29.919 615 351 25 1 575 356 930 4.12e-54 198
Msa0592300 MtrunA17_Chr3g0087841 31.499 527 317 19 2 512 388 886 4.63e-54 198
Msa0592300 MtrunA17_Chr3g0085751 31.047 554 355 17 3 546 367 903 5.85e-54 198
Msa0592300 MtrunA17_Chr1g0169901 30.657 548 333 17 4 522 381 910 6.88e-54 198
Msa0592300 MtrunA17_Chr3g0090371 32.122 523 309 17 12 512 387 885 1.26e-53 197
Msa0592300 MtrunA17_Chr3g0085091 29.661 590 376 17 5 573 377 948 1.27e-53 197
Msa0592300 MtrunA17_Chr3g0085161 29.272 591 376 19 5 573 236 806 1.81e-53 196
Msa0592300 MtrunA17_Chr1g0164631 34.286 455 275 15 1 446 394 833 2.20e-53 196
Msa0592300 MtrunA17_Chr5g0430141 30.862 580 349 21 2 568 377 917 2.28e-53 196
Msa0592300 MtrunA17_Chr3g0084081 31.868 546 315 21 3 520 388 904 2.74e-53 196
Msa0592300 MtrunA17_Chr1g0168901 31.493 489 306 17 25 506 381 847 6.61e-53 194
Msa0592300 MtrunA17_Chr6g0470011 29.022 603 372 21 2 583 372 939 1.08e-52 194
Msa0592300 MtrunA17_Chr1g0155321 29.791 574 361 19 2 568 371 909 1.28e-52 194
Msa0592300 MtrunA17_Chr5g0429961 29.853 613 351 22 2 579 376 944 1.48e-52 194
Msa0592300 MtrunA17_Chr6g0470081 28.099 605 378 18 2 585 372 940 1.99e-52 194
Msa0592300 MtrunA17_Chr5g0430641 30.756 582 356 23 2 575 376 918 2.01e-52 193
Msa0592300 MtrunA17_Chr3g0085331 29.599 598 351 23 5 573 391 947 2.48e-52 193
Msa0592300 MtrunA17_Chr5g0430291 32.021 584 337 25 2 568 376 916 2.86e-52 193
Msa0592300 MtrunA17_Chr5g0430621 29.913 575 357 17 2 568 376 912 3.32e-52 192
Msa0592300 MtrunA17_Chr5g0430511 30.637 581 346 23 3 568 378 916 3.47e-52 192
Msa0592300 MtrunA17_Chr6g0470021 28.788 594 362 18 2 573 263 817 4.52e-52 191
Msa0592300 MtrunA17_Chr6g0468121 29.758 578 342 18 23 581 389 921 5.29e-52 192
Msa0592300 MtrunA17_Chr3g0084971 31.792 519 319 21 5 512 380 874 5.35e-52 192
Msa0592300 MtrunA17_Chr3g0089421 30.952 546 334 18 22 551 407 925 7.19e-52 192
Msa0592300 MtrunA17_Chr3g0082101 33.000 400 206 13 24 419 410 751 1.33e-51 191
Msa0592300 MtrunA17_Chr3g0085471 29.452 584 362 18 3 576 389 932 2.06e-51 191
Msa0592300 MtrunA17_Chr3g0089761 34.286 420 250 15 5 419 391 789 3.06e-51 190
Msa0592300 MtrunA17_Chr1g0147141 32.582 488 289 16 39 512 424 885 4.76e-51 189
Msa0592300 MtrunA17_Chr4g0027251 29.573 585 345 22 2 564 376 915 6.29e-51 189
Msa0592300 MtrunA17_Chr7g0221481 33.333 408 255 10 20 419 390 788 9.25e-51 187
Msa0592300 MtrunA17_Chr3g0113781 33.176 425 255 15 2 419 166 568 1.18e-50 186
Msa0592300 MtrunA17_Chr3g0089591 30.263 532 288 17 5 476 396 904 1.33e-50 188
Msa0592300 MtrunA17_Chr3g0089961 34.243 403 243 12 22 419 408 793 2.15e-50 187
Msa0592300 MtrunA17_Chr6g0468201 29.307 563 341 18 26 575 1 519 3.64e-50 184
Msa0592300 MtrunA17_Chr3g0089811 31.134 485 299 16 5 476 391 853 4.62e-50 187
Msa0592300 MtrunA17_Chr3g0090401 31.084 489 282 18 2 476 599 1046 5.65e-50 186
Msa0592300 MtrunA17_Chr3g0113791 33.176 425 255 15 2 419 371 773 7.06e-50 186
Msa0592300 MtrunA17_Chr5g0415551 33.643 431 243 17 41 458 288 688 7.88e-50 184
Msa0592300 MtrunA17_Chr3g0089911 38.796 299 168 8 1 298 387 671 1.03e-49 182
Msa0592300 MtrunA17_Chr6g0468151 32.952 437 238 17 2 423 377 773 1.24e-49 185
Msa0592300 MtrunA17_Chr3g0085521 30.809 581 360 22 5 564 367 926 1.86e-49 185
Msa0592300 MtrunA17_Chr7g0248531 28.676 544 337 19 1 514 374 896 2.07e-49 184
Msa0592300 MtrunA17_Chr3g0085451 30.902 521 321 17 3 512 361 853 4.65e-49 183
Msa0592300 MtrunA17_Chr5g0446611 31.753 485 266 16 4 450 390 847 9.05e-49 182
Msa0592300 MtrunA17_Chr3g0085931 28.151 611 367 21 2 581 372 941 9.12e-49 182
Msa0592300 MtrunA17_Chr3g0089471 29.588 534 290 16 5 476 392 901 9.97e-49 182
Msa0592300 MtrunA17_Chr5g0430581 29.776 581 362 20 2 575 370 911 1.36e-48 182
Msa0592300 MtrunA17_Chr3g0085111 27.334 589 372 16 5 580 372 917 1.48e-48 182
Msa0592300 MtrunA17_Chr3g0085501 29.252 588 363 25 1 569 387 940 2.40e-48 181
Msa0592300 MtrunA17_Chr2g0299151 28.752 633 373 28 4 586 373 977 3.71e-48 181
Msa0592300 MtrunA17_Chr6g0470001 28.720 578 356 18 28 583 3 546 3.95e-48 179
Msa0592300 MtrunA17_Chr6g0467961 34.474 409 222 18 22 419 387 760 4.79e-48 180
Msa0592300 MtrunA17_Chr3g0086741 30.753 478 314 13 5 476 399 865 5.15e-48 180
Msa0592300 MtrunA17_Chr5g0429951 30.139 574 362 19 2 569 376 916 7.37e-48 180
Msa0592300 MtrunA17_Chr5g0430951 30.508 531 328 17 2 520 375 876 7.64e-48 179
Msa0592300 MtrunA17_Chr3g0113481 33.416 401 242 12 2 398 371 750 9.92e-48 178
Msa0592300 MtrunA17_Chr5g0430441 29.756 615 352 24 2 579 376 947 1.12e-47 179
Msa0592300 MtrunA17_Chr3g0085551 28.850 513 329 15 3 505 264 750 1.34e-47 177
Msa0592300 MtrunA17_Chr5g0414201 29.916 478 302 13 2 473 381 831 1.81e-47 178
Msa0592300 MtrunA17_Chr4g0010231 66.942 121 40 0 453 573 15 135 1.95e-47 162
Msa0592300 MtrunA17_Chr1g0155991 31.520 533 326 18 2 529 373 871 3.48e-47 178
Msa0592300 MtrunA17_Chr3g0082371 33.668 398 215 13 31 419 38 395 1.29e-46 171
Msa0592300 MtrunA17_Chr3g0087731 30.930 430 262 12 3 423 182 585 1.56e-46 175
Msa0592300 MtrunA17_Chr5g0430721 29.352 586 359 20 3 575 418 961 2.00e-46 176
Msa0592300 MtrunA17_Chr6g0467911 31.250 432 257 15 2 423 372 773 2.51e-46 174
Msa0592300 MtrunA17_Chr5g0413811 31.544 447 263 17 2 444 156 563 2.87e-46 173
Msa0592300 MtrunA17_Chr3g0091961 36.577 298 174 8 24 319 87 371 3.84e-45 164
Msa0592300 MtrunA17_Chr6g0468361 30.065 459 283 13 26 474 1 431 4.94e-45 166
Msa0592300 MtrunA17_Chr2g0299121 30.561 517 318 22 6 506 391 882 5.30e-45 171
Msa0592300 MtrunA17_Chr6g0468271 29.372 589 341 26 22 576 386 933 8.81e-45 171
Msa0592300 MtrunA17_Chr6g0456121 30.736 462 289 13 22 476 383 820 1.03e-44 170
Msa0592300 MtrunA17_Chr6g0468451 26.905 643 366 23 2 572 370 980 1.10e-44 171
Msa0592300 MtrunA17_Chr3g0087541 29.490 529 319 20 5 512 391 886 2.98e-44 169
Msa0592300 MtrunA17_Chr7g0257201 36.594 276 154 5 6 277 406 664 4.53e-44 168
Msa0592300 MtrunA17_Chr8g0355071 73.267 101 26 1 1 100 195 295 4.61e-44 159
Msa0592300 MtrunA17_Chr1g0189551 34.472 322 168 6 4 301 414 716 5.29e-44 168
Msa0592300 MtrunA17_Chr6g0468021 30.123 571 337 23 22 575 387 912 6.22e-44 168
Msa0592300 MtrunA17_Chr8g0355411 35.786 299 171 7 6 302 387 666 7.29e-44 167
Msa0592300 MtrunA17_Chr5g0414181 28.136 590 352 18 2 581 380 907 9.13e-44 167
Msa0592300 MtrunA17_Chr7g0248221 34.884 301 173 7 4 302 393 672 2.74e-43 166
Msa0592300 MtrunA17_Chr2g0299101 32.553 427 253 17 6 419 391 795 5.21e-43 165
Msa0592300 MtrunA17_Chr2g0299091 32.319 427 254 17 6 419 365 769 8.40e-43 165
Msa0592300 MtrunA17_Chr3g0123111 31.514 403 239 14 2 399 371 741 1.05e-42 164
Msa0592300 MtrunA17_Chr3g0085801 29.063 523 293 17 3 512 391 848 2.84e-42 163
Msa0592300 MtrunA17_Chr1g0169951 37.868 272 156 5 6 277 404 662 5.72e-42 161
Msa0592300 MtrunA17_Chr8g0338861 36.641 262 155 5 20 281 105 355 9.07e-42 160
Msa0592300 MtrunA17_Chr3g0085171 31.266 403 265 8 5 403 359 753 1.75e-41 161
Msa0592300 MtrunA17_Chr8g0352211 33.684 285 167 6 2 281 1379 1646 6.86e-40 156
Msa0592300 MtrunA17_Chr3g0084061 29.845 516 335 18 5 512 381 877 9.58e-40 155
Msa0592300 MtrunA17_Chr2g0299141 33.750 320 188 11 4 313 104 409 1.08e-39 150
Msa0592300 MtrunA17_Chr6g0468101 26.968 597 333 18 2 573 371 889 1.17e-39 155
Msa0592300 MtrunA17_Chr7g0257541 34.420 276 164 6 4 277 403 663 1.36e-39 155
Msa0592300 MtrunA17_Chr7g0257191 35.662 272 162 4 6 277 407 665 3.02e-39 154
Msa0592300 MtrunA17_Chr5g0433771 33.555 301 178 7 1 299 395 675 5.23e-39 153
Msa0592300 MtrunA17_Chr5g0414301 30.097 515 293 20 66 575 1 453 6.40e-39 150
Msa0592300 MtrunA17_Chr7g0257221 37.184 277 155 8 6 279 406 666 7.87e-39 152
Msa0592300 MtrunA17_Chr2g0309151 36.727 275 159 7 4 277 172 432 1.71e-38 148
Msa0592300 MtrunA17_Chr4g0051651 34.231 260 153 4 5 253 417 669 1.99e-38 150
Msa0592300 MtrunA17_Chr3g0091971 27.723 505 297 17 29 525 375 819 6.21e-38 150
Msa0592300 MtrunA17_Chr5g0415481 33.523 352 200 15 56 400 1 325 3.78e-37 144
Msa0592300 MtrunA17_Chr3g0085711 29.752 484 312 17 66 538 1 467 6.66e-37 146
Msa0592300 MtrunA17_Chr7g0218941 32.698 315 177 9 2 305 384 674 1.55e-36 145
Msa0592300 MtrunA17_Chr8g0338671 32.862 283 169 6 2 280 267 532 1.66e-36 144
Msa0592300 MtrunA17_Chr8g0392511 31.534 352 213 14 61 403 1 333 1.91e-36 139
Msa0592300 MtrunA17_Chr8g0337891 34.296 277 166 8 2 277 381 642 4.77e-36 144
Msa0592300 MtrunA17_Chr8g0338621 34.615 286 154 10 2 280 384 643 9.81e-36 142
Msa0592300 MtrunA17_Chr3g0101251 32.344 337 191 14 5 326 363 677 9.82e-36 143
Msa0592300 MtrunA17_Chr6g0468111 33.663 303 175 10 22 322 231 509 7.78e-35 138
Msa0592300 MtrunA17_Chr8g0346831 34.601 263 150 7 23 281 403 647 4.89e-34 138
Msa0592300 MtrunA17_Chr6g0475491 32.616 279 174 8 2 280 385 649 1.35e-33 136
Msa0592300 MtrunA17_Chr3g0078361 34.538 249 148 7 3 247 204 441 2.85e-33 132
Msa0592300 MtrunA17_Chr3g0085431 27.251 422 252 12 3 419 22 393 1.81e-32 131
Msa0592300 MtrunA17_Chr6g0471941 32.491 277 169 8 22 296 400 660 4.45e-32 132
Msa0592300 MtrunA17_Chr8g0338261 33.205 259 151 7 2 255 383 624 9.93e-32 131
Msa0592300 MtrunA17_Chr8g0338391 32.270 282 165 9 21 296 398 659 1.08e-31 131
Msa0592300 MtrunA17_Chr8g0338361 33.969 262 149 9 2 256 248 492 1.40e-31 128
Msa0592300 MtrunA17_Chr5g0430341 28.543 501 300 21 90 575 5 462 8.62e-31 126
Msa0592300 MtrunA17_Chr3g0089441 28.144 501 291 19 114 564 1 482 9.16e-31 127
Msa0592300 MtrunA17_Chr5g0415511 31.667 300 191 7 2 301 381 666 2.47e-30 126
Msa0592300 MtrunA17_Chr2g0282891 34.962 266 154 8 61 322 112 362 3.28e-30 122
Msa0592300 MtrunA17_Chr3g0087301 27.641 568 310 26 81 575 400 939 9.30e-30 125
Msa0592300 MtrunA17_Chr3g0101181 29.076 368 211 16 25 370 425 764 2.33e-29 124
Msa0592300 MtrunA17_Chr8g0338251 31.579 304 176 7 2 289 369 656 3.08e-29 123
Msa0592300 MtrunA17_Chr5g0417301 34.066 273 148 11 3 268 328 575 3.79e-29 122
Msa0592300 MtrunA17_Chr3g0094301 31.429 350 200 13 27 360 424 749 4.98e-29 122
Msa0592300 MtrunA17_Chr7g0229761 31.429 350 200 13 27 360 424 749 4.98e-29 122
Msa0592300 MtrunA17_Chr5g0404741 26.882 558 320 22 24 551 403 902 5.38e-29 122
Msa0592300 MtrunA17_Chr3g0101221 31.366 322 191 13 25 333 421 725 6.72e-29 122
Msa0592300 MtrunA17_Chr3g0081211 29.553 291 175 8 25 301 420 694 6.91e-29 122
Msa0592300 MtrunA17_Chr3g0080771 30.682 352 199 10 27 360 424 748 8.34e-29 122
Msa0592300 MtrunA17_Chr3g0080791 31.418 261 145 8 27 277 424 660 3.48e-28 120
Msa0592300 MtrunA17_Chr4g0010491 89.655 58 6 0 1 58 371 428 4.11e-28 117
Msa0592300 MtrunA17_Chr3g0101241 28.075 374 224 14 5 365 376 717 8.82e-28 119
Msa0592300 MtrunA17_Chr3g0101271 28.075 374 224 14 5 365 376 717 9.73e-28 119
Msa0592300 MtrunA17_Chr3g0112511 30.323 310 177 11 5 301 390 673 1.62e-27 118
Msa0592300 MtrunA17_Chr3g0100681 30.000 280 176 7 25 301 233 495 2.54e-27 116
Msa0592300 MtrunA17_Chr3g0080741 29.508 366 200 13 27 369 426 756 1.02e-26 115
Msa0592300 MtrunA17_Chr3g0080731 29.379 354 202 14 27 360 424 749 1.86e-26 114
Msa0592300 MtrunA17_Chr3g0080751 28.134 359 215 12 27 369 424 755 4.41e-26 113
Msa0592300 MtrunA17_Chr2g0299001 29.787 329 200 9 25 336 419 733 2.21e-25 111
Msa0592300 MtrunA17_Chr3g0080721 27.021 470 265 16 27 484 162 565 3.26e-25 110
Msa0592300 MtrunA17_Chr3g0080601 30.233 258 157 9 25 277 421 660 3.46e-25 110
Msa0592300 MtrunA17_Chr3g0100731 28.571 308 198 10 5 307 154 444 3.93e-25 110
Msa0592300 MtrunA17_Chr3g0101011 27.540 374 229 12 25 383 434 780 4.20e-25 110
Msa0592300 MtrunA17_Chr3g0081341 30.859 256 158 7 25 277 485 724 4.61e-25 110
Msa0592300 MtrunA17_Chr3g0091041 38.255 149 84 3 1 149 372 512 5.35e-25 108
Msa0592300 MtrunA17_Chr3g0100851 27.273 286 189 8 25 307 296 565 9.24e-25 109
Msa0592300 MtrunA17_Chr3g0100831 29.932 294 172 10 25 307 415 685 1.31e-24 108
Msa0592300 MtrunA17_Chr3g0081361 29.352 293 169 9 27 301 428 700 1.44e-24 108
Msa0592300 MtrunA17_Chr3g0100801 28.063 253 170 5 25 277 376 616 2.24e-24 108
Msa0592300 MtrunA17_Chr3g0101231 29.972 357 209 15 25 366 425 755 2.31e-24 108
Msa0592300 MtrunA17_Chr8g0338431 32.328 232 146 4 64 295 1 221 2.72e-24 107
Msa0592300 MtrunA17_Chr3g0101321 27.937 315 190 12 5 307 391 680 3.12e-24 107
Msa0592300 MtrunA17_Chr3g0080651 28.852 305 164 10 27 307 342 617 6.55e-24 106
Msa0592300 MtrunA17_Chr5g0414161 29.859 355 212 16 203 544 56 386 1.25e-23 103
Msa0592300 MtrunA17_Chr1g0151481 28.767 292 188 7 25 307 423 703 1.62e-23 105
Msa0592300 MtrunA17_Chr3g0089931 40.984 122 66 2 5 126 376 491 1.63e-23 104
Msa0592300 MtrunA17_Chr4g0020501 26.683 401 189 14 25 419 361 662 2.46e-23 105
Msa0592300 MtrunA17_Chr3g0092291 33.043 230 142 7 66 294 1 219 3.45e-23 102
Msa0592300 MtrunA17_Chr3g0100971 29.412 289 168 10 25 301 417 681 3.57e-23 104
Msa0592300 MtrunA17_Chr5g0410021 28.608 388 217 14 20 383 395 746 3.68e-23 104
Msa0592300 MtrunA17_Chr3g0101391 27.356 329 218 8 5 326 81 395 4.73e-23 103
Msa0592300 MtrunA17_Chr3g0100761 29.758 289 167 9 25 301 377 641 5.24e-23 103
Msa0592300 MtrunA17_Chr1g0189351 26.250 560 312 29 5 523 396 895 6.39e-23 103
Msa0592300 MtrunA17_Chr3g0100961 28.819 288 167 9 25 301 420 680 6.65e-23 103
Msa0592300 MtrunA17_Chr5g0414231 41.463 123 68 3 2 124 381 499 7.74e-23 102
Msa0592300 MtrunA17_Chr7g0219851 26.687 326 195 13 14 304 395 711 8.79e-23 103
Msa0592300 MtrunA17_Chr5g0409991 29.697 330 187 11 20 326 393 700 1.19e-22 102
Msa0592300 MtrunA17_Chr5g0410031 28.179 291 174 11 28 301 410 682 1.59e-22 102
Msa0592300 MtrunA17_Chr8g0351811 25.558 493 296 14 114 573 1 455 2.48e-22 101
Msa0592300 MtrunA17_Chr5g0410001 30.976 297 157 16 28 301 409 680 2.56e-22 102
Msa0592300 MtrunA17_Chr7g0248431 36.735 147 87 3 4 149 393 534 3.63e-22 100
Msa0592300 MtrunA17_Chr1g0189511 26.721 247 144 4 5 250 42 252 8.93e-22 95.5
Msa0592300 MtrunA17_Chr3g0101201 27.851 377 229 18 5 365 400 749 1.47e-21 99.4
Msa0592300 MtrunA17_Chr3g0081371 29.653 317 192 9 23 326 424 722 3.14e-21 98.6
Msa0592300 MtrunA17_Chr3g0081391 28.387 310 176 10 25 312 421 706 5.57e-21 97.8
Msa0592300 MtrunA17_Chr3g0081191 27.987 318 193 10 25 326 417 714 4.01e-20 95.1
Msa0592300 MtrunA17_Chr5g0409971 30.997 371 213 14 27 383 408 749 4.40e-20 94.7
Msa0592300 MtrunA17_Chr4g0037421 27.826 345 187 12 28 339 468 783 4.48e-20 94.7
Msa0592300 MtrunA17_Chr1g0169941 32.867 143 92 2 6 148 166 304 7.53e-20 91.3
Msa0592300 MtrunA17_Chr3g0101331 24.910 558 276 23 25 523 428 901 6.16e-19 91.3
Msa0592300 MtrunA17_Chr3g0084351 28.947 228 140 9 27 249 349 559 1.24e-18 89.4
Msa0592300 MtrunA17_Chr4g0071011 30.952 294 183 10 218 506 64 342 1.46e-18 89.0
Msa0592300 MtrunA17_Chr3g0104421 48.148 81 41 1 20 100 22 101 2.76e-18 80.5
Msa0592300 MtrunA17_Chr7g0255751 38.068 176 104 5 196 369 30 202 7.38e-18 82.8
Msa0592300 MtrunA17_Chr1g0197241 26.020 392 250 19 4 365 1014 1395 2.41e-16 83.2
Msa0592300 MtrunA17_Chr5g0414171 37.607 117 69 3 2 118 308 420 2.67e-16 81.6
Msa0592300 MtrunA17_Chr1g0159111 29.455 275 145 11 24 281 387 629 6.39e-16 81.6
Msa0592300 MtrunA17_Chr4g0048421 27.027 296 179 11 24 308 386 655 1.06e-15 80.9
Msa0592300 MtrunA17_Chr3g0101211 27.586 232 142 11 5 229 189 401 2.14e-15 78.6
Msa0592300 MtrunA17_Chr5g0414221 41.176 102 59 1 201 302 46 146 2.87e-15 73.2
Msa0592300 MtrunA17_Chr7g0257611 31.220 205 116 9 36 233 1 187 9.42e-15 73.2
Msa0592300 MtrunA17_Chr3g0089431 42.667 75 40 1 5 79 395 466 9.97e-15 77.0
Msa0592300 MtrunA17_Chr6g0468331 24.919 309 153 8 23 302 388 646 1.55e-14 77.0
Msa0592300 MtrunA17_Chr7g0257251 38.462 104 59 3 6 107 72 172 2.77e-14 71.2
Msa0592300 MtrunA17_Chr3g0081181 27.211 294 180 10 24 301 404 679 3.45e-14 75.9
Msa0592300 MtrunA17_Chr6g0478721 26.848 257 147 11 24 256 304 543 1.55e-13 73.9
Msa0592300 MtrunA17_Chr8g0338681 41.667 84 47 2 2 85 160 241 1.56e-13 70.9
Msa0592300 MtrunA17_Chr4g0048471 27.757 263 136 11 24 265 261 490 5.91e-13 72.0
Msa0592300 MtrunA17_Chr7g0257551 48.000 75 37 1 19 91 341 415 6.77e-13 70.9
Msa0592300 MtrunA17_Chr1g0189321 26.172 256 147 8 25 266 14 241 1.11e-12 68.2
Msa0592300 MtrunA17_Chr8g0374541 37.113 97 60 1 206 301 663 759 4.10e-12 69.3
Msa0592300 MtrunA17_Chr6g0468381 41.667 72 41 1 29 100 4 74 1.18e-11 67.4
Msa0592300 MtrunA17_Chr8g0382411 25.063 395 214 13 214 569 41 392 1.29e-11 67.0
Msa0592300 MtrunA17_Chr6g0468341 38.462 78 47 1 23 100 390 466 1.55e-11 67.4
Msa0592300 MtrunA17_Chr1g0189271 38.028 71 43 1 23 93 255 324 4.30e-11 64.7
Msa0592300 MtrunA17_Chr8g0374351 36.047 86 55 0 216 301 612 697 5.79e-11 65.5
Msa0592300 MtrunA17_Chr4g0071021 41.096 73 41 1 3 75 360 430 6.23e-11 64.7
Msa0592300 MtrunA17_Chr7g0223441 36.986 73 46 0 229 301 2 74 6.53e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0592300 AT3G14460.1 39.080 348 197 10 23 368 401 735 5.83e-52 193
Msa0592300 AT3G14470.1 29.239 578 345 22 25 569 411 957 8.27e-51 189
Msa0592300 AT3G14470.2 29.239 578 345 22 25 569 411 957 8.27e-51 189
Msa0592300 AT3G07040.1 30.000 270 158 8 19 277 406 655 3.55e-25 111
Msa0592300 AT3G50950.2 27.654 358 224 11 12 360 387 718 9.04e-24 106
Msa0592300 AT3G50950.1 27.654 358 224 11 12 360 387 718 9.04e-24 106
Msa0592300 AT4G27220.2 26.343 391 243 12 22 404 353 706 3.08e-21 99.0
Msa0592300 AT4G27220.1 24.338 604 354 21 22 575 345 895 3.37e-21 99.0
Msa0592300 AT1G69550.1 30.208 384 219 13 215 575 875 1232 2.06e-19 93.6
Msa0592300 AT3G46710.1 29.582 311 168 13 6 301 383 657 2.12e-19 93.2
Msa0592300 AT1G58400.3 25.455 385 233 15 21 385 404 754 4.41e-19 92.0
Msa0592300 AT1G58400.2 25.455 385 233 15 21 385 404 754 4.41e-19 92.0
Msa0592300 AT4G27190.1 28.963 328 189 14 22 326 376 682 4.96e-19 92.0
Msa0592300 AT1G58400.1 25.455 385 233 15 21 385 394 744 5.84e-19 91.7
Msa0592300 AT1G63350.4 26.061 495 278 18 22 510 385 797 1.16e-18 90.9
Msa0592300 AT1G12220.3 31.690 284 156 10 22 301 268 517 1.38e-18 90.5
Msa0592300 AT1G12220.1 31.690 284 156 10 22 301 389 638 1.62e-18 90.1
Msa0592300 AT1G12220.2 31.690 284 156 10 22 301 389 638 1.62e-18 90.1
Msa0592300 AT1G53350.1 27.483 302 187 11 17 304 395 678 1.23e-17 87.4
Msa0592300 AT3G46730.1 29.818 275 171 11 31 301 408 664 4.20e-17 85.9
Msa0592300 AT5G47250.1 27.740 292 166 12 15 301 382 633 2.67e-16 83.2
Msa0592300 AT1G63350.1 29.181 281 169 9 22 301 385 636 3.50e-16 82.8
Msa0592300 AT1G63350.3 29.181 281 169 9 22 301 385 636 3.53e-16 82.8
Msa0592300 AT1G63350.2 29.181 281 169 9 22 301 385 636 3.53e-16 82.8
Msa0592300 AT1G59620.2 25.667 487 306 21 25 487 270 724 9.72e-16 81.3
Msa0592300 AT5G43470.3 26.433 314 184 13 17 310 400 686 1.10e-14 78.2
Msa0592300 AT5G43470.2 26.433 314 184 13 17 310 400 686 1.10e-14 78.2
Msa0592300 AT5G43470.4 26.433 314 184 13 17 310 400 686 1.10e-14 78.2
Msa0592300 AT5G43470.1 26.433 314 184 13 17 310 400 686 1.10e-14 78.2
Msa0592300 AT1G59218.1 23.772 509 309 23 28 510 412 867 1.50e-14 77.8
Msa0592300 AT1G59218.2 23.772 509 309 23 28 510 412 867 1.50e-14 77.8
Msa0592300 AT1G59218.3 23.772 509 309 23 28 510 412 867 1.50e-14 77.8
Msa0592300 AT1G58848.1 23.772 509 309 23 28 510 412 867 1.50e-14 77.8
Msa0592300 AT1G58848.2 23.772 509 309 23 28 510 412 867 1.50e-14 77.8
Msa0592300 AT3G25510.2 29.644 253 149 7 180 425 622 852 1.62e-14 77.8
Msa0592300 AT3G25510.2 23.729 413 268 10 163 551 419 808 1.04e-11 68.6
Msa0592300 AT3G25510.1 29.644 253 149 7 180 425 622 852 1.62e-14 77.8
Msa0592300 AT3G25510.1 23.729 413 268 10 163 551 419 808 1.04e-11 68.6
Msa0592300 AT5G43730.4 27.778 288 168 12 22 304 384 636 2.44e-14 77.0
Msa0592300 AT5G43730.1 27.778 288 168 12 22 304 384 636 2.44e-14 77.0
Msa0592300 AT5G43730.3 27.778 288 168 12 22 304 384 636 2.44e-14 77.0
Msa0592300 AT5G43730.2 27.778 288 168 12 22 304 384 636 2.44e-14 77.0
Msa0592300 AT5G43730.5 27.778 288 168 12 22 304 384 636 2.44e-14 77.0
Msa0592300 AT4G26090.1 26.300 327 199 11 20 323 383 690 2.53e-14 77.0
Msa0592300 AT5G44510.1 28.053 303 178 10 169 445 641 929 2.70e-14 77.0
Msa0592300 AT5G44510.3 28.053 303 178 10 169 445 641 929 3.08e-14 76.6
Msa0592300 AT5G44510.2 28.053 303 178 10 169 445 641 929 3.09e-14 76.6
Msa0592300 AT5G63020.1 28.028 289 164 8 22 305 387 636 3.16e-14 76.6
Msa0592300 AT5G44510.4 28.053 303 178 10 169 445 641 929 3.45e-14 76.6
Msa0592300 AT1G10920.5 26.780 295 187 11 23 304 114 392 1.12e-13 74.3
Msa0592300 AT1G10920.3 26.780 295 187 11 23 304 114 392 1.12e-13 74.3
Msa0592300 AT1G58410.1 26.347 334 193 16 21 331 399 702 1.18e-13 74.7
Msa0592300 AT1G58410.4 26.347 334 193 16 21 331 399 702 1.18e-13 74.7
Msa0592300 AT1G58410.2 26.347 334 193 16 21 331 399 702 1.18e-13 74.7
Msa0592300 AT3G46530.1 29.352 293 162 13 31 311 408 667 1.62e-13 74.3
Msa0592300 AT1G10920.1 26.780 295 187 11 23 304 284 562 2.02e-13 73.9
Msa0592300 AT1G10920.2 26.780 295 187 11 23 304 284 562 2.02e-13 73.9
Msa0592300 AT1G10920.4 26.780 295 187 11 23 304 284 562 2.02e-13 73.9
Msa0592300 AT1G61190.2 27.076 277 152 10 23 288 387 624 3.70e-13 73.2
Msa0592300 AT1G61190.3 27.076 277 152 10 23 288 387 624 3.70e-13 73.2
Msa0592300 AT1G61190.1 27.076 277 152 10 23 288 387 624 4.70e-13 72.8
Msa0592300 AT1G63360.2 27.972 286 179 9 22 304 350 611 6.53e-13 72.4
Msa0592300 AT1G63360.1 27.972 286 179 9 22 304 385 646 6.55e-13 72.4
Msa0592300 AT1G59780.2 24.462 372 226 18 18 367 389 727 8.90e-13 72.0
Msa0592300 AT2G14080.2 41.509 106 61 1 197 301 560 665 9.21e-13 72.0
Msa0592300 AT2G14080.2 27.562 283 154 7 188 440 593 854 1.16e-12 71.6
Msa0592300 AT1G59124.1 25.503 298 185 11 28 310 412 687 9.75e-13 71.6
Msa0592300 AT1G58807.2 25.503 298 185 11 28 310 412 687 9.75e-13 71.6
Msa0592300 AT2G14080.1 41.509 106 61 1 197 301 693 798 9.99e-13 72.0
Msa0592300 AT2G14080.1 27.562 283 154 7 188 440 726 987 1.33e-12 71.6
Msa0592300 AT1G59780.1 24.462 372 226 18 18 367 394 732 1.01e-12 71.6
Msa0592300 AT1G59124.2 24.272 412 248 18 28 419 412 779 1.17e-12 71.6
Msa0592300 AT1G58807.1 24.272 412 248 18 28 419 412 779 1.17e-12 71.6
Msa0592300 AT1G61180.2 27.306 271 156 9 23 288 386 620 1.19e-12 71.6
Msa0592300 AT1G61180.1 27.306 271 156 9 23 288 386 620 1.54e-12 71.2
Msa0592300 AT1G61190.4 27.083 240 136 10 23 258 387 591 3.30e-12 70.1
Msa0592300 AT1G50180.1 23.704 270 163 10 31 280 416 662 1.15e-11 68.2
Msa0592300 AT3G04220.1 39.080 87 53 0 215 301 730 816 1.17e-11 68.2
Msa0592300 AT1G51480.1 26.894 264 151 9 22 255 386 637 1.38e-11 68.2
Msa0592300 AT3G04220.3 39.080 87 53 0 215 301 759 845 1.52e-11 68.2
Msa0592300 AT5G48620.6 26.710 307 192 12 17 310 400 686 1.90e-11 67.8
Msa0592300 AT5G48620.1 26.710 307 192 12 17 310 400 686 1.90e-11 67.8
Msa0592300 AT5G48620.4 26.710 307 192 12 17 310 400 686 1.90e-11 67.8
Msa0592300 AT5G48620.2 26.710 307 192 12 17 310 400 686 1.90e-11 67.8
Msa0592300 AT5G48620.3 26.710 307 192 12 17 310 400 686 1.90e-11 67.8
Msa0592300 AT5G48620.5 26.710 307 192 12 17 310 400 686 1.90e-11 67.8
Msa0592300 AT4G16890.1 25.455 330 175 14 159 449 821 1118 2.42e-11 67.4
Msa0592300 AT4G16890.5 25.455 330 175 14 159 449 812 1109 2.48e-11 67.4
Msa0592300 AT5G11250.3 37.419 155 83 5 158 311 679 820 3.03e-11 67.0
Msa0592300 AT5G11250.1 37.419 155 83 5 158 311 679 820 3.03e-11 67.0
Msa0592300 AT5G11250.2 37.419 155 83 5 158 311 761 902 3.23e-11 67.0
Msa0592300 AT1G15890.1 27.778 108 71 2 22 128 386 487 7.74e-11 65.9
Msa0592300 AT1G15890.2 27.778 108 71 2 22 128 226 327 9.60e-11 65.1

Find 84 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCAAATTTGTATATAAAT+TGG 0.199425 4_2:-17605818 None:intergenic
GCTAAGCATATGAATTTAAT+AGG 0.202808 4_2:+17605634 Msa0592300:CDS
GGCCAATTTATATACAAATT+TGG 0.221374 4_2:+17605816 Msa0592300:CDS
CAACTTCGTCATGTCTCTTT+TGG 0.226810 4_2:+17605031 Msa0592300:CDS
TTCTCAATGCTCACAAATTA+AGG 0.231814 4_2:+17605092 Msa0592300:CDS
GAACAAAGATCTTATGAAAA+TGG 0.259615 4_2:+17604634 Msa0592300:CDS
TATTGATAATGCCTTGATAT+TGG 0.260905 4_2:-17605761 None:intergenic
TACCAACTTCCAAAGATCTT+TGG 0.263797 4_2:-17605398 None:intergenic
TTATCAATTGAATAGTCTTT+TGG 0.274060 4_2:-17604755 None:intergenic
AGGGGACAACTCGTGATAAA+TGG 0.284375 4_2:+17605580 Msa0592300:CDS
GCTTTGAATTGGATTCTTCC+TGG 0.326722 4_2:+17605053 Msa0592300:CDS
ATATTGCAATCTTGTGCATT+TGG 0.332872 4_2:-17605854 None:intergenic
ACTTCTATGCCACTTGGAAT+AGG 0.334883 4_2:+17605460 Msa0592300:CDS
GAGAGTTGCCCAAAGATCTT+TGG 0.339595 4_2:+17605389 Msa0592300:CDS
TCACAGAAATAGTTCTTATT+CGG 0.340862 4_2:+17605989 Msa0592300:CDS
ACCAACTTCCAAAGATCTTT+GGG 0.343827 4_2:-17605397 None:intergenic
AAGAGAAGTTGGAACTTTCC+AGG 0.361598 4_2:-17605071 None:intergenic
TGACACAATTTGTGTTAGAT+AGG 0.364016 4_2:+17605506 Msa0592300:CDS
AGTACAAGTTTAGAAGATAT+TGG 0.364805 4_2:+17604833 Msa0592300:CDS
TTCATATGCTTAGCTTCTGT+TGG 0.369235 4_2:-17605625 None:intergenic
CATTTCTATTACCAAAAGAT+TGG 0.374852 4_2:+17605116 Msa0592300:CDS
CATGCACAATATCATGCATT+TGG 0.378434 4_2:-17604940 None:intergenic
TATTGGTGATAAGTACTTCA+TGG 0.391664 4_2:+17604850 Msa0592300:CDS
TTGATCGGTTATCATTGAAA+TGG 0.398990 4_2:+17605668 Msa0592300:CDS
ATCAAGGCATTATCAATAGA+TGG 0.402232 4_2:+17605766 Msa0592300:CDS
TTCCACAACACAAACATATC+AGG 0.408980 4_2:+17606130 Msa0592300:CDS
ATCTACCATTTCATTTGAAA+AGG 0.413086 4_2:+17604708 Msa0592300:CDS
AAACAACAGTGATTCAACTT+TGG 0.432741 4_2:+17604777 Msa0592300:CDS
TGGAGACTCTTCTACTCAAT+AGG 0.449079 4_2:+17605353 Msa0592300:CDS
TGAGCATTGAGAAGAGAAGT+TGG 0.451834 4_2:-17605082 None:intergenic
TTAATTCAGCTATAGACCTT+GGG 0.459557 4_2:-17605324 None:intergenic
TATAGCTGAATTAATTAACT+TGG 0.459872 4_2:+17605333 Msa0592300:CDS
ATTAATTCAGCTATAGACCT+TGG 0.460756 4_2:-17605325 None:intergenic
TAGGAGGGTTACATAATTTG+AGG 0.465590 4_2:+17605560 Msa0592300:CDS
GCCCAAAGATCTTTGGAAGT+TGG 0.474845 4_2:+17605396 Msa0592300:CDS
TATCTGAAGATACTCTACTT+TGG 0.476434 4_2:-17606208 None:intergenic
GTGCTGAATCTTAACTACAT+AGG 0.478811 4_2:+17605217 Msa0592300:CDS
TGGTGTGACATTGTCTAGTT+CGG 0.483486 4_2:+17605795 Msa0592300:CDS
TGATCTTTCTCATTGTTACA+AGG 0.488339 4_2:+17605291 Msa0592300:CDS
AGTGCTAAAACTAGTGAGCT+AGG 0.490632 4_2:+17605541 Msa0592300:CDS
TGCTGAATCTTAACTACATA+GGG 0.491884 4_2:+17605218 Msa0592300:CDS
TTCCTGATATGTTTGTGTTG+TGG 0.492504 4_2:-17606132 None:intergenic
CTAAGCATATGAATTTAATA+GGG 0.492693 4_2:+17605635 Msa0592300:CDS
TTCATTCTACCAATACTAGC+TGG 0.494273 4_2:-17605253 None:intergenic
GCATGTCAAACGCCTCCAAA+TGG 0.504874 4_2:+17605894 Msa0592300:CDS
AAGTTATTATACAGGTTCAC+TGG 0.505019 4_2:+17605147 Msa0592300:CDS
GCATTATCAATAGATGGATT+CGG 0.512942 4_2:+17605772 Msa0592300:CDS
TAAATGGCTTGGAATATTTG+AGG 0.513142 4_2:+17605596 Msa0592300:CDS
AGGAGGGTTACATAATTTGA+GGG 0.522808 4_2:+17605561 Msa0592300:CDS
ACAACTCGTGATAAATGGCT+TGG 0.523415 4_2:+17605585 Msa0592300:CDS
CTATTACCAAAAGATTGGAA+TGG 0.546031 4_2:+17605121 Msa0592300:CDS
CATTCTGCACTCCAATATCA+AGG 0.555191 4_2:+17605750 Msa0592300:CDS
CTAAAACTAGTGAGCTAGGA+GGG 0.556001 4_2:+17605545 Msa0592300:CDS
TAGGGATGTCACATCTTGAT+CGG 0.557783 4_2:+17605653 Msa0592300:CDS
GGAATTGTCTAGAACTTGAC+AGG 0.559277 4_2:-17605192 None:intergenic
CACAATATCATGCATTTGGA+AGG 0.559531 4_2:-17604936 None:intergenic
AAATTAACTTCTATGCCACT+TGG 0.560552 4_2:+17605454 Msa0592300:CDS
GGTTAACAAATCTGAAAGGA+TGG 0.561523 4_2:+17606010 Msa0592300:CDS
TGACCAATCCTCCTTCTCCA+TGG 0.561743 4_2:-17604603 None:intergenic
CTTAATGTATTCCATGGAGA+AGG 0.564059 4_2:+17604592 None:intergenic
AGGAAGATTCCAGCTAGTAT+TGG 0.564225 4_2:+17605244 Msa0592300:CDS
TCATTCTTACATTCGCGACA+TGG 0.570285 4_2:+17604910 Msa0592300:CDS
ACAAGGTTGAAGAGCTCCCA+AGG 0.576306 4_2:+17605308 Msa0592300:CDS
TGATGGCAATGAGTTTGAAA+AGG 0.577183 4_2:+17605708 Msa0592300:CDS
GATCCGTGCAATGATGAAGA+TGG 0.578357 4_2:+17606329 Msa0592300:CDS
TTGTCTAGAACTTGACAGGA+TGG 0.584381 4_2:-17605188 None:intergenic
ATTCGGTTAACAAATCTGAA+AGG 0.587573 4_2:+17606006 Msa0592300:CDS
AATGTATTCCATGGAGAAGG+AGG 0.588050 4_2:+17604595 None:intergenic
GTCATCTTTCCTATTCCAAG+TGG 0.595808 4_2:-17605469 None:intergenic
ATTCCATGGAGAAGGAGGAT+TGG 0.596365 4_2:+17604600 None:intergenic
ATCTTAACTACATAGGGTCG+AGG 0.597146 4_2:+17605224 Msa0592300:CDS
CAACCATCTTCATCATTGCA+CGG 0.601113 4_2:-17606332 None:intergenic
ATTCAACTTTGGATTGCACA+AGG 0.608570 4_2:+17604788 Msa0592300:CDS
AAATGGAATGAACATACTGT+TGG 0.609484 4_2:+17605685 Msa0592300:CDS
TTGACTATGCACTCTAGTTG+AGG 0.621511 4_2:-17605925 None:intergenic
AAGTCTTCGACATCTTGAGT+TGG 0.632505 4_2:+17605420 Msa0592300:CDS
GCTAAAACTAGTGAGCTAGG+AGG 0.640801 4_2:+17605544 Msa0592300:CDS
TTCAACTTTGGATTGCACAA+GGG 0.659918 4_2:+17604789 Msa0592300:CDS
ATTGCGTATCGAAAATTGCG+AGG 0.668586 4_2:+17606293 Msa0592300:CDS
TGTAGTTAAGATTCAGCACA+CGG 0.669377 4_2:-17605213 None:intergenic
AATGAACATACTGTTGGTGA+TGG 0.669916 4_2:+17605691 Msa0592300:CDS
GGAGGGTTACATAATTTGAG+GGG 0.676289 4_2:+17605562 Msa0592300:CDS
CTTATGAAAATGGATGAACA+AGG 0.684779 4_2:+17604644 Msa0592300:CDS
TTATCAATAGATGGATTCGG+TGG 0.692618 4_2:+17605775 Msa0592300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACCAAATTTGTATATAAAT+TGG - chr4_2:17605821-17605840 None:intergenic 15.0%
!! AACCAAATTTGTATATAAAT+TGG - chr4_2:17605821-17605840 None:intergenic 15.0%
!!! TTATCAATTGAATAGTCTTT+TGG - chr4_2:17604758-17604777 None:intergenic 20.0%
!!! CTATCTTTTAGTCAATAAAA+AGG + chr4_2:17604991-17605010 Msa0592300:CDS 20.0%
!! AATGGAAAAAGTTATTATAC+AGG + chr4_2:17605139-17605158 Msa0592300:CDS 20.0%
!! TATAGCTGAATTAATTAACT+TGG + chr4_2:17605333-17605352 Msa0592300:CDS 20.0%
!! CTAAGCATATGAATTTAATA+GGG + chr4_2:17605635-17605654 Msa0592300:CDS 20.0%
!!! TTATCAATTGAATAGTCTTT+TGG - chr4_2:17604758-17604777 None:intergenic 20.0%
!!! CTATCTTTTAGTCAATAAAA+AGG + chr4_2:17604991-17605010 Msa0592300:CDS 20.0%
!! AATGGAAAAAGTTATTATAC+AGG + chr4_2:17605139-17605158 Msa0592300:CDS 20.0%
!! TATAGCTGAATTAATTAACT+TGG + chr4_2:17605333-17605352 Msa0592300:CDS 20.0%
!! CTAAGCATATGAATTTAATA+GGG + chr4_2:17605635-17605654 Msa0592300:CDS 20.0%
! GAACAAAGATCTTATGAAAA+TGG + chr4_2:17604634-17604653 Msa0592300:CDS 25.0%
! ATCTACCATTTCATTTGAAA+AGG + chr4_2:17604708-17604727 Msa0592300:CDS 25.0%
! AGTACAAGTTTAGAAGATAT+TGG + chr4_2:17604833-17604852 Msa0592300:CDS 25.0%
! CATTTCTATTACCAAAAGAT+TGG + chr4_2:17605116-17605135 Msa0592300:CDS 25.0%
! GCTAAGCATATGAATTTAAT+AGG + chr4_2:17605634-17605653 Msa0592300:CDS 25.0%
!!! TATTGATAATGCCTTGATAT+TGG - chr4_2:17605764-17605783 None:intergenic 25.0%
! GGCCAATTTATATACAAATT+TGG + chr4_2:17605816-17605835 Msa0592300:CDS 25.0%
! TCACAGAAATAGTTCTTATT+CGG + chr4_2:17605989-17606008 Msa0592300:CDS 25.0%
! GAACAAAGATCTTATGAAAA+TGG + chr4_2:17604634-17604653 Msa0592300:CDS 25.0%
! ATCTACCATTTCATTTGAAA+AGG + chr4_2:17604708-17604727 Msa0592300:CDS 25.0%
! AGTACAAGTTTAGAAGATAT+TGG + chr4_2:17604833-17604852 Msa0592300:CDS 25.0%
! CATTTCTATTACCAAAAGAT+TGG + chr4_2:17605116-17605135 Msa0592300:CDS 25.0%
! GCTAAGCATATGAATTTAAT+AGG + chr4_2:17605634-17605653 Msa0592300:CDS 25.0%
!!! TATTGATAATGCCTTGATAT+TGG - chr4_2:17605764-17605783 None:intergenic 25.0%
! GGCCAATTTATATACAAATT+TGG + chr4_2:17605816-17605835 Msa0592300:CDS 25.0%
! TCACAGAAATAGTTCTTATT+CGG + chr4_2:17605989-17606008 Msa0592300:CDS 25.0%
CTTATGAAAATGGATGAACA+AGG + chr4_2:17604644-17604663 Msa0592300:CDS 30.0%
! AAGCACCTTTTCAAATGAAA+TGG - chr4_2:17604716-17604735 None:intergenic 30.0%
AAACAACAGTGATTCAACTT+TGG + chr4_2:17604777-17604796 Msa0592300:CDS 30.0%
! TATTGGTGATAAGTACTTCA+TGG + chr4_2:17604850-17604869 Msa0592300:CDS 30.0%
TTCTCAATGCTCACAAATTA+AGG + chr4_2:17605092-17605111 Msa0592300:CDS 30.0%
CTATTACCAAAAGATTGGAA+TGG + chr4_2:17605121-17605140 Msa0592300:CDS 30.0%
! CTTTTTCCATTCCAATCTTT+TGG - chr4_2:17605130-17605149 None:intergenic 30.0%
AAGTTATTATACAGGTTCAC+TGG + chr4_2:17605147-17605166 Msa0592300:CDS 30.0%
TGCTGAATCTTAACTACATA+GGG + chr4_2:17605218-17605237 Msa0592300:CDS 30.0%
TGATCTTTCTCATTGTTACA+AGG + chr4_2:17605291-17605310 Msa0592300:CDS 30.0%
TTAATTCAGCTATAGACCTT+GGG - chr4_2:17605327-17605346 None:intergenic 30.0%
ATTAATTCAGCTATAGACCT+TGG - chr4_2:17605328-17605347 None:intergenic 30.0%
AAATTAACTTCTATGCCACT+TGG + chr4_2:17605454-17605473 Msa0592300:CDS 30.0%
TGACACAATTTGTGTTAGAT+AGG + chr4_2:17605506-17605525 Msa0592300:CDS 30.0%
! TAAATGGCTTGGAATATTTG+AGG + chr4_2:17605596-17605615 Msa0592300:CDS 30.0%
TTGATCGGTTATCATTGAAA+TGG + chr4_2:17605668-17605687 Msa0592300:CDS 30.0%
AAATGGAATGAACATACTGT+TGG + chr4_2:17605685-17605704 Msa0592300:CDS 30.0%
! ATCAAGGCATTATCAATAGA+TGG + chr4_2:17605766-17605785 Msa0592300:CDS 30.0%
! GCATTATCAATAGATGGATT+CGG + chr4_2:17605772-17605791 Msa0592300:CDS 30.0%
ATATTGCAATCTTGTGCATT+TGG - chr4_2:17605857-17605876 None:intergenic 30.0%
ATTCGGTTAACAAATCTGAA+AGG + chr4_2:17606006-17606025 Msa0592300:CDS 30.0%
TAGCGAAAAAGAAATCTCAA+GGG + chr4_2:17606041-17606060 Msa0592300:CDS 30.0%
TATCTGAAGATACTCTACTT+TGG - chr4_2:17606211-17606230 None:intergenic 30.0%
! CTCAATTTTAAATCTCTCTG+TGG + chr4_2:17606240-17606259 Msa0592300:CDS 30.0%
CTTATGAAAATGGATGAACA+AGG + chr4_2:17604644-17604663 Msa0592300:CDS 30.0%
! AAGCACCTTTTCAAATGAAA+TGG - chr4_2:17604716-17604735 None:intergenic 30.0%
AAACAACAGTGATTCAACTT+TGG + chr4_2:17604777-17604796 Msa0592300:CDS 30.0%
! TATTGGTGATAAGTACTTCA+TGG + chr4_2:17604850-17604869 Msa0592300:CDS 30.0%
TTCTCAATGCTCACAAATTA+AGG + chr4_2:17605092-17605111 Msa0592300:CDS 30.0%
CTATTACCAAAAGATTGGAA+TGG + chr4_2:17605121-17605140 Msa0592300:CDS 30.0%
! CTTTTTCCATTCCAATCTTT+TGG - chr4_2:17605130-17605149 None:intergenic 30.0%
AAGTTATTATACAGGTTCAC+TGG + chr4_2:17605147-17605166 Msa0592300:CDS 30.0%
TGCTGAATCTTAACTACATA+GGG + chr4_2:17605218-17605237 Msa0592300:CDS 30.0%
TGATCTTTCTCATTGTTACA+AGG + chr4_2:17605291-17605310 Msa0592300:CDS 30.0%
TTAATTCAGCTATAGACCTT+GGG - chr4_2:17605327-17605346 None:intergenic 30.0%
ATTAATTCAGCTATAGACCT+TGG - chr4_2:17605328-17605347 None:intergenic 30.0%
AAATTAACTTCTATGCCACT+TGG + chr4_2:17605454-17605473 Msa0592300:CDS 30.0%
TGACACAATTTGTGTTAGAT+AGG + chr4_2:17605506-17605525 Msa0592300:CDS 30.0%
! TAAATGGCTTGGAATATTTG+AGG + chr4_2:17605596-17605615 Msa0592300:CDS 30.0%
TTGATCGGTTATCATTGAAA+TGG + chr4_2:17605668-17605687 Msa0592300:CDS 30.0%
AAATGGAATGAACATACTGT+TGG + chr4_2:17605685-17605704 Msa0592300:CDS 30.0%
! ATCAAGGCATTATCAATAGA+TGG + chr4_2:17605766-17605785 Msa0592300:CDS 30.0%
! GCATTATCAATAGATGGATT+CGG + chr4_2:17605772-17605791 Msa0592300:CDS 30.0%
ATATTGCAATCTTGTGCATT+TGG - chr4_2:17605857-17605876 None:intergenic 30.0%
ATTCGGTTAACAAATCTGAA+AGG + chr4_2:17606006-17606025 Msa0592300:CDS 30.0%
TAGCGAAAAAGAAATCTCAA+GGG + chr4_2:17606041-17606060 Msa0592300:CDS 30.0%
TATCTGAAGATACTCTACTT+TGG - chr4_2:17606211-17606230 None:intergenic 30.0%
! CTCAATTTTAAATCTCTCTG+TGG + chr4_2:17606240-17606259 Msa0592300:CDS 30.0%
ATTCAACTTTGGATTGCACA+AGG + chr4_2:17604788-17604807 Msa0592300:CDS 35.0%
TTCAACTTTGGATTGCACAA+GGG + chr4_2:17604789-17604808 Msa0592300:CDS 35.0%
CACAATATCATGCATTTGGA+AGG - chr4_2:17604939-17604958 None:intergenic 35.0%
CATGCACAATATCATGCATT+TGG - chr4_2:17604943-17604962 None:intergenic 35.0%
!!! TGTCTCTTTTGGCTTTGAAT+TGG + chr4_2:17605042-17605061 Msa0592300:CDS 35.0%
TGTAGTTAAGATTCAGCACA+CGG - chr4_2:17605216-17605235 None:intergenic 35.0%
GTGCTGAATCTTAACTACAT+AGG + chr4_2:17605217-17605236 Msa0592300:CDS 35.0%
TTCATTCTACCAATACTAGC+TGG - chr4_2:17605256-17605275 None:intergenic 35.0%
ACCAACTTCCAAAGATCTTT+GGG - chr4_2:17605400-17605419 None:intergenic 35.0%
TACCAACTTCCAAAGATCTT+TGG - chr4_2:17605401-17605420 None:intergenic 35.0%
TAGGAGGGTTACATAATTTG+AGG + chr4_2:17605560-17605579 Msa0592300:CDS 35.0%
AGGAGGGTTACATAATTTGA+GGG + chr4_2:17605561-17605580 Msa0592300:CDS 35.0%
TTCATATGCTTAGCTTCTGT+TGG - chr4_2:17605628-17605647 None:intergenic 35.0%
! AATGAACATACTGTTGGTGA+TGG + chr4_2:17605691-17605710 Msa0592300:CDS 35.0%
TGATGGCAATGAGTTTGAAA+AGG + chr4_2:17605708-17605727 Msa0592300:CDS 35.0%
! TTATCAATAGATGGATTCGG+TGG + chr4_2:17605775-17605794 Msa0592300:CDS 35.0%
! GTTGAGGCATATTTTCCATT+TGG - chr4_2:17605912-17605931 None:intergenic 35.0%
GGTTAACAAATCTGAAAGGA+TGG + chr4_2:17606010-17606029 Msa0592300:CDS 35.0%
GTAGCGAAAAAGAAATCTCA+AGG + chr4_2:17606040-17606059 Msa0592300:CDS 35.0%
AGCGAAAAAGAAATCTCAAG+GGG + chr4_2:17606042-17606061 Msa0592300:CDS 35.0%
TTCCACAACACAAACATATC+AGG + chr4_2:17606130-17606149 Msa0592300:CDS 35.0%
TTCCTGATATGTTTGTGTTG+TGG - chr4_2:17606135-17606154 None:intergenic 35.0%
ATTCAACTTTGGATTGCACA+AGG + chr4_2:17604788-17604807 Msa0592300:CDS 35.0%
TTCAACTTTGGATTGCACAA+GGG + chr4_2:17604789-17604808 Msa0592300:CDS 35.0%
CACAATATCATGCATTTGGA+AGG - chr4_2:17604939-17604958 None:intergenic 35.0%
CATGCACAATATCATGCATT+TGG - chr4_2:17604943-17604962 None:intergenic 35.0%
!!! TGTCTCTTTTGGCTTTGAAT+TGG + chr4_2:17605042-17605061 Msa0592300:CDS 35.0%
TGTAGTTAAGATTCAGCACA+CGG - chr4_2:17605216-17605235 None:intergenic 35.0%
GTGCTGAATCTTAACTACAT+AGG + chr4_2:17605217-17605236 Msa0592300:CDS 35.0%
TTCATTCTACCAATACTAGC+TGG - chr4_2:17605256-17605275 None:intergenic 35.0%
ACCAACTTCCAAAGATCTTT+GGG - chr4_2:17605400-17605419 None:intergenic 35.0%
TACCAACTTCCAAAGATCTT+TGG - chr4_2:17605401-17605420 None:intergenic 35.0%
TAGGAGGGTTACATAATTTG+AGG + chr4_2:17605560-17605579 Msa0592300:CDS 35.0%
AGGAGGGTTACATAATTTGA+GGG + chr4_2:17605561-17605580 Msa0592300:CDS 35.0%
TTCATATGCTTAGCTTCTGT+TGG - chr4_2:17605628-17605647 None:intergenic 35.0%
! AATGAACATACTGTTGGTGA+TGG + chr4_2:17605691-17605710 Msa0592300:CDS 35.0%
TGATGGCAATGAGTTTGAAA+AGG + chr4_2:17605708-17605727 Msa0592300:CDS 35.0%
! TTATCAATAGATGGATTCGG+TGG + chr4_2:17605775-17605794 Msa0592300:CDS 35.0%
! GTTGAGGCATATTTTCCATT+TGG - chr4_2:17605912-17605931 None:intergenic 35.0%
GGTTAACAAATCTGAAAGGA+TGG + chr4_2:17606010-17606029 Msa0592300:CDS 35.0%
GTAGCGAAAAAGAAATCTCA+AGG + chr4_2:17606040-17606059 Msa0592300:CDS 35.0%
AGCGAAAAAGAAATCTCAAG+GGG + chr4_2:17606042-17606061 Msa0592300:CDS 35.0%
TTCCACAACACAAACATATC+AGG + chr4_2:17606130-17606149 Msa0592300:CDS 35.0%
TTCCTGATATGTTTGTGTTG+TGG - chr4_2:17606135-17606154 None:intergenic 35.0%
TCATTCTTACATTCGCGACA+TGG + chr4_2:17604910-17604929 Msa0592300:CDS 40.0%
! CAACTTCGTCATGTCTCTTT+TGG + chr4_2:17605031-17605050 Msa0592300:CDS 40.0%
! GCTTTGAATTGGATTCTTCC+TGG + chr4_2:17605053-17605072 Msa0592300:CDS 40.0%
AAGAGAAGTTGGAACTTTCC+AGG - chr4_2:17605074-17605093 None:intergenic 40.0%
!! TGAGCATTGAGAAGAGAAGT+TGG - chr4_2:17605085-17605104 None:intergenic 40.0%
! TTGTCTAGAACTTGACAGGA+TGG - chr4_2:17605191-17605210 None:intergenic 40.0%
! GGAATTGTCTAGAACTTGAC+AGG - chr4_2:17605195-17605214 None:intergenic 40.0%
ATCTTAACTACATAGGGTCG+AGG + chr4_2:17605224-17605243 Msa0592300:CDS 40.0%
AGGAAGATTCCAGCTAGTAT+TGG + chr4_2:17605244-17605263 Msa0592300:CDS 40.0%
TGGAGACTCTTCTACTCAAT+AGG + chr4_2:17605353-17605372 Msa0592300:CDS 40.0%
AAGTCTTCGACATCTTGAGT+TGG + chr4_2:17605420-17605439 Msa0592300:CDS 40.0%
! ACTTCTATGCCACTTGGAAT+AGG + chr4_2:17605460-17605479 Msa0592300:CDS 40.0%
GTCATCTTTCCTATTCCAAG+TGG - chr4_2:17605472-17605491 None:intergenic 40.0%
AGTGCTAAAACTAGTGAGCT+AGG + chr4_2:17605541-17605560 Msa0592300:CDS 40.0%
CTAAAACTAGTGAGCTAGGA+GGG + chr4_2:17605545-17605564 Msa0592300:CDS 40.0%
GGAGGGTTACATAATTTGAG+GGG + chr4_2:17605562-17605581 Msa0592300:CDS 40.0%
ACAACTCGTGATAAATGGCT+TGG + chr4_2:17605585-17605604 Msa0592300:CDS 40.0%
TAGGGATGTCACATCTTGAT+CGG + chr4_2:17605653-17605672 Msa0592300:CDS 40.0%
CATTCTGCACTCCAATATCA+AGG + chr4_2:17605750-17605769 Msa0592300:CDS 40.0%
TGGTGTGACATTGTCTAGTT+CGG + chr4_2:17605795-17605814 Msa0592300:CDS 40.0%
! GAGGCATATTTTCCATTTGG+AGG - chr4_2:17605909-17605928 None:intergenic 40.0%
TTGACTATGCACTCTAGTTG+AGG - chr4_2:17605928-17605947 None:intergenic 40.0%
ATTGCGTATCGAAAATTGCG+AGG + chr4_2:17606293-17606312 Msa0592300:CDS 40.0%
CAACCATCTTCATCATTGCA+CGG - chr4_2:17606335-17606354 None:intergenic 40.0%
TCATTCTTACATTCGCGACA+TGG + chr4_2:17604910-17604929 Msa0592300:CDS 40.0%
! CAACTTCGTCATGTCTCTTT+TGG + chr4_2:17605031-17605050 Msa0592300:CDS 40.0%
! GCTTTGAATTGGATTCTTCC+TGG + chr4_2:17605053-17605072 Msa0592300:CDS 40.0%
AAGAGAAGTTGGAACTTTCC+AGG - chr4_2:17605074-17605093 None:intergenic 40.0%
!! TGAGCATTGAGAAGAGAAGT+TGG - chr4_2:17605085-17605104 None:intergenic 40.0%
! TTGTCTAGAACTTGACAGGA+TGG - chr4_2:17605191-17605210 None:intergenic 40.0%
! GGAATTGTCTAGAACTTGAC+AGG - chr4_2:17605195-17605214 None:intergenic 40.0%
ATCTTAACTACATAGGGTCG+AGG + chr4_2:17605224-17605243 Msa0592300:CDS 40.0%
AGGAAGATTCCAGCTAGTAT+TGG + chr4_2:17605244-17605263 Msa0592300:CDS 40.0%
TGGAGACTCTTCTACTCAAT+AGG + chr4_2:17605353-17605372 Msa0592300:CDS 40.0%
AAGTCTTCGACATCTTGAGT+TGG + chr4_2:17605420-17605439 Msa0592300:CDS 40.0%
! ACTTCTATGCCACTTGGAAT+AGG + chr4_2:17605460-17605479 Msa0592300:CDS 40.0%
GTCATCTTTCCTATTCCAAG+TGG - chr4_2:17605472-17605491 None:intergenic 40.0%
AGTGCTAAAACTAGTGAGCT+AGG + chr4_2:17605541-17605560 Msa0592300:CDS 40.0%
CTAAAACTAGTGAGCTAGGA+GGG + chr4_2:17605545-17605564 Msa0592300:CDS 40.0%
GGAGGGTTACATAATTTGAG+GGG + chr4_2:17605562-17605581 Msa0592300:CDS 40.0%
ACAACTCGTGATAAATGGCT+TGG + chr4_2:17605585-17605604 Msa0592300:CDS 40.0%
TAGGGATGTCACATCTTGAT+CGG + chr4_2:17605653-17605672 Msa0592300:CDS 40.0%
CATTCTGCACTCCAATATCA+AGG + chr4_2:17605750-17605769 Msa0592300:CDS 40.0%
TGGTGTGACATTGTCTAGTT+CGG + chr4_2:17605795-17605814 Msa0592300:CDS 40.0%
! GAGGCATATTTTCCATTTGG+AGG - chr4_2:17605909-17605928 None:intergenic 40.0%
TTGACTATGCACTCTAGTTG+AGG - chr4_2:17605928-17605947 None:intergenic 40.0%
ATTGCGTATCGAAAATTGCG+AGG + chr4_2:17606293-17606312 Msa0592300:CDS 40.0%
CAACCATCTTCATCATTGCA+CGG - chr4_2:17606335-17606354 None:intergenic 40.0%
GAGAGTTGCCCAAAGATCTT+TGG + chr4_2:17605389-17605408 Msa0592300:CDS 45.0%
! GCCCAAAGATCTTTGGAAGT+TGG + chr4_2:17605396-17605415 Msa0592300:CDS 45.0%
GCTAAAACTAGTGAGCTAGG+AGG + chr4_2:17605544-17605563 Msa0592300:CDS 45.0%
AGGGGACAACTCGTGATAAA+TGG + chr4_2:17605580-17605599 Msa0592300:CDS 45.0%
GATCCGTGCAATGATGAAGA+TGG + chr4_2:17606329-17606348 Msa0592300:CDS 45.0%
GAGAGTTGCCCAAAGATCTT+TGG + chr4_2:17605389-17605408 Msa0592300:CDS 45.0%
! GCCCAAAGATCTTTGGAAGT+TGG + chr4_2:17605396-17605415 Msa0592300:CDS 45.0%
GCTAAAACTAGTGAGCTAGG+AGG + chr4_2:17605544-17605563 Msa0592300:CDS 45.0%
AGGGGACAACTCGTGATAAA+TGG + chr4_2:17605580-17605599 Msa0592300:CDS 45.0%
GATCCGTGCAATGATGAAGA+TGG + chr4_2:17606329-17606348 Msa0592300:CDS 45.0%
ACAAGGTTGAAGAGCTCCCA+AGG + chr4_2:17605308-17605327 Msa0592300:CDS 50.0%
GCATGTCAAACGCCTCCAAA+TGG + chr4_2:17605894-17605913 Msa0592300:CDS 50.0%
ACAAGGTTGAAGAGCTCCCA+AGG + chr4_2:17605308-17605327 Msa0592300:CDS 50.0%
GCATGTCAAACGCCTCCAAA+TGG + chr4_2:17605894-17605913 Msa0592300:CDS 50.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 17604605 17606365 17604605 ID=Msa0592300;Name=Msa0592300
chr4_2 mRNA 17604605 17606365 17604605 ID=Msa0592300-mRNA-1;Parent=Msa0592300;Name=Msa0592300-mRNA-1;_AED=0.15;_eAED=0.18;_QI=0|-1|0|1|-1|1|1|0|586
chr4_2 exon 17604605 17606365 17604605 ID=Msa0592300-mRNA-1:exon:5076;Parent=Msa0592300-mRNA-1
chr4_2 CDS 17604605 17606365 17604605 ID=Msa0592300-mRNA-1:cds;Parent=Msa0592300-mRNA-1
Gene Sequence

>Msa0592300

ATGGAGAAGGAGGATTGGTCAACATTCAAGAACAAAGATCTTATGAAAATGGATGAACAAGGTGATAATAAAATTTTACAGCTTATCAAACTAAGTTATGATCATCTACCATTTCATTTGAAAAGGTGCTTTGCTTTTTGTTCATTGTTTCCAAAAGACTATTCAATTGATAAAACAACAGTGATTCAACTTTGGATTGCACAAGGGTTTGTTCAGTCATCAGATGAAAGTACAAGTTTAGAAGATATTGGTGATAAGTACTTCATGGATTTAATTCATAAATCTTTCTTTCAAAATGTCTCTTTTCATTCTTACATTCGCGACATGGTGACCTTCCAAATGCATGATATTGTGCATGATCTTGCAACTTCTGTTTCAAGAAATGACTATCTTTTAGTCAATAAAAAGGAGCAGCATATCAACAAACAACTTCGTCATGTCTCTTTTGGCTTTGAATTGGATTCTTCCTGGAAAGTTCCAACTTCTCTTCTCAATGCTCACAAATTAAGGACATTTCTATTACCAAAAGATTGGAATGGAAAAAGTTATTATACAGGTTCACTGGAAGTGTCTGTTTGTAATTCCATCCTGTCAAGTTCTAGACAATTCCGTGTGCTGAATCTTAACTACATAGGGTCGAGGAAGATTCCAGCTAGTATTGGTAGAATGAAACATCTAAGATATCTTGATCTTTCTCATTGTTACAAGGTTGAAGAGCTCCCAAGGTCTATAGCTGAATTAATTAACTTGGAGACTCTTCTACTCAATAGGTGTTCTGAATTGAGAGAGTTGCCCAAAGATCTTTGGAAGTTGGTAAGTCTTCGACATCTTGAGTTGGACGATTGTGATAAATTAACTTCTATGCCACTTGGAATAGGAAAGATGACTAATCTTCAAACACTGACACAATTTGTGTTAGATAGGACTTCTAAAGATAGTGCTAAAACTAGTGAGCTAGGAGGGTTACATAATTTGAGGGGACAACTCGTGATAAATGGCTTGGAATATTTGAGGCATTGTCCAACAGAAGCTAAGCATATGAATTTAATAGGGATGTCACATCTTGATCGGTTATCATTGAAATGGAATGAACATACTGTTGGTGATGGCAATGAGTTTGAAAAGGATGATATAATTCTACATGACATTCTGCACTCCAATATCAAGGCATTATCAATAGATGGATTCGGTGGTGTGACATTGTCTAGTTCGGCCAATTTATATACAAATTTGGTTGACTTGCATTTATCCAAATGCACAAGATTGCAATATTTTGAACTCTCACTGTTGCATGTCAAACGCCTCCAAATGGAAAATATGCCTCAACTAGAGTGCATAGTCAATGATAACAATAGTCATAACTCATCATCATTTTGTGCGACACTCACAGAAATAGTTCTTATTCGGTTAACAAATCTGAAAGGATGGTGTAACTGTAGCGAAAAAGAAATCTCAAGGGGTTGTTGTCATCAGTTTCAGAGTCTTGAATACTTATGTATTTGTGATTGTTATAATCTATTTTCAATTCCACAACACAAACATATCAGGAAAGTAAATCTTTCAAATGTCACAGAGAAGATATTACAGCAAGCAGTCAATCATTCCAAAGTAGAGTATCTTCAGATATATGACATACTCAATTTTAAATCTCTCTGTGGAGTCTTTCAACATCTAAGTTCACTGTCTAAATTGCGTATCGAAAATTGCGAGGAGTTTGAATGTTTGATCCGTGCAATGATGAAGATGGTTGTTACAGCATGA
Protein sequence

>Msa0592300

MEKEDWSTFKNKDLMKMDEQGDNKILQLIKLSYDHLPFHLKRCFAFCSLFPKDYSIDKTTVIQLWIAQGFVQSSDESTSLEDIGDKYFMDLIHKSFFQNVSFHSYIRDMVTFQMHDIVHDLATSVSRNDYLLVNKKEQHINKQLRHVSFGFELDSSWKVPTSLLNAHKLRTFLLPKDWNGKSYYTGSLEVSVCNSILSSSRQFRVLNLNYIGSRKIPASIGRMKHLRYLDLSHCYKVEELPRSIAELINLETLLLNRCSELRELPKDLWKLVSLRHLELDDCDKLTSMPLGIGKMTNLQTLTQFVLDRTSKDSAKTSELGGLHNLRGQLVINGLEYLRHCPTEAKHMNLIGMSHLDRLSLKWNEHTVGDGNEFEKDDIILHDILHSNIKALSIDGFGGVTLSSSANLYTNLVDLHLSKCTRLQYFELSLLHVKRLQMENMPQLECIVNDNNSHNSSSFCATLTEIVLIRLTNLKGWCNCSEKEISRGCCHQFQSLEYLCICDCYNLFSIPQHKHIRKVNLSNVTEKILQQAVNHSKVEYLQIYDILNFKSLCGVFQHLSSLSKLRIENCEEFECLIRAMMKMVVTA*