Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598090 | XP_004487156.1 | 53.744 | 454 | 168 | 9 | 20 | 440 | 345 | 789 | 2.05e-158 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598090 | A0A1S2XFF7 | 53.744 | 454 | 168 | 9 | 20 | 440 | 345 | 789 | 9.80e-159 | 481 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0598090 | Msa1054020 | 0.800155 | 1.645726e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598090 | MtrunA17_Chr2g0325841 | 52.814 | 462 | 166 | 10 | 22 | 440 | 572 | 1024 | 1.49e-155 | 471 |
| Msa0598090 | MtrunA17_Chr4g0010671 | 56.720 | 372 | 128 | 8 | 20 | 368 | 82 | 443 | 2.00e-130 | 389 |
| Msa0598090 | MtrunA17_Chr4g0010671 | 52.381 | 84 | 30 | 2 | 184 | 260 | 450 | 530 | 2.51e-16 | 81.3 |
| Msa0598090 | MtrunA17_Chr1g0153901 | 33.138 | 341 | 159 | 9 | 21 | 304 | 82 | 410 | 4.25e-36 | 139 |
| Msa0598090 | MtrunA17_Chr6g0469071 | 33.234 | 337 | 163 | 8 | 21 | 304 | 82 | 409 | 7.26e-36 | 139 |
| Msa0598090 | MtrunA17_Chr6g0466851 | 25.326 | 383 | 220 | 17 | 23 | 374 | 104 | 451 | 5.37e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 109 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGAACATGTTGGGAAATT+TGG | 0.085053 | 4_2:+32131183 | None:intergenic |
| CCCTCAACACTTTCATTAAA+TGG | 0.180188 | 4_2:-32130891 | Msa0598090:CDS |
| CCTCCCAACAAGAGATATTA+TGG | 0.231757 | 4_2:-32130613 | Msa0598090:CDS |
| CTCCACTTCTCATGGCGTTT+TGG | 0.240930 | 4_2:+32132316 | None:intergenic |
| AACCTTTGTCACCTCATCTA+TGG | 0.250188 | 4_2:+32130921 | None:intergenic |
| GTCTCACGATTCTACGAGTA+TGG | 0.254023 | 4_2:-32130563 | Msa0598090:CDS |
| ACATATAATTCACACTCTTC+TGG | 0.254643 | 4_2:+32131081 | None:intergenic |
| TTTGGTCCAGTTTCTCATTA+TGG | 0.258502 | 4_2:-32131330 | Msa0598090:CDS |
| GCGGGAGGATCCATACTTTC+TGG | 0.262212 | 4_2:-32132585 | Msa0598090:intron |
| TTTGAAATATTATGAGTATC+AGG | 0.270453 | 4_2:+32132767 | None:intergenic |
| TATAACAGGAGAAAAGAAAT+AGG | 0.271660 | 4_2:-32132486 | Msa0598090:intron |
| ACAAGGAGATATTTAAATAA+TGG | 0.276500 | 4_2:-32132683 | Msa0598090:CDS |
| GTGGGAATTAGGCAATATTT+TGG | 0.277082 | 4_2:-32131348 | Msa0598090:CDS |
| TAGAAGCAAAGTCAGTATTT+TGG | 0.299421 | 4_2:-32132943 | Msa0598090:CDS |
| GAGAACATGTTGGGAAATTT+GGG | 0.303343 | 4_2:+32131184 | None:intergenic |
| CATAATCAGCTGTTAGAAAA+TGG | 0.314358 | 4_2:-32131000 | Msa0598090:CDS |
| CCTACGTCTAGTTTCTAATA+AGG | 0.317103 | 4_2:-32130857 | Msa0598090:intron |
| GTCCAACAAACCAGAAAGTA+TGG | 0.329124 | 4_2:+32132575 | None:intergenic |
| TTGGTGGAGGTGTGGGAATT+AGG | 0.331434 | 4_2:-32131359 | Msa0598090:CDS |
| CATTGAAAAGTTGATGTTAA+GGG | 0.338244 | 4_2:-32130691 | Msa0598090:CDS |
| CAAGGAGATATTTAAATAAT+GGG | 0.358220 | 4_2:-32132682 | Msa0598090:CDS |
| ATAACAGGAGAAAAGAAATA+GGG | 0.368760 | 4_2:-32132485 | Msa0598090:intron |
| TATTTAAATATCTCCTTGTC+AGG | 0.372950 | 4_2:+32132687 | None:intergenic |
| TTCTAACAGCTGATTATGTA+TGG | 0.377840 | 4_2:+32131005 | None:intergenic |
| AGACTGTTAAAGACAAGATC+TGG | 0.378299 | 4_2:-32132896 | Msa0598090:CDS |
| ATTTGTTTGCTATTGAAAAC+AGG | 0.387510 | 4_2:+32131294 | None:intergenic |
| CGAACACGTCCAGGGTGTTC+AGG | 0.394765 | 4_2:+32131387 | None:intergenic |
| ACATTGAAAAGTTGATGTTA+AGG | 0.398182 | 4_2:-32130692 | Msa0598090:CDS |
| CATATAATTCACACTCTTCT+GGG | 0.400238 | 4_2:+32131082 | None:intergenic |
| CAGATCTTACTAAGGAGATC+AGG | 0.404791 | 4_2:-32131257 | Msa0598090:CDS |
| GAGGCACCATAATGAGAAAC+TGG | 0.428114 | 4_2:+32131324 | None:intergenic |
| CCATTTAATGAAAGTGTTGA+GGG | 0.447585 | 4_2:+32130891 | None:intergenic |
| TTGAGTGACAAATCTCCTCT+TGG | 0.450159 | 4_2:-32132656 | Msa0598090:CDS |
| AACATATAAATTTATTGATG+TGG | 0.452450 | 4_2:-32132633 | Msa0598090:CDS |
| GTCACCTCATCTATGGGCAT+GGG | 0.455431 | 4_2:+32130928 | None:intergenic |
| TGTCACCTCATCTATGGGCA+TGG | 0.457787 | 4_2:+32130927 | None:intergenic |
| TTTCAAAATTGAAAGACAAA+TGG | 0.462506 | 4_2:-32132751 | Msa0598090:CDS |
| CTTGCAGGTATATCGGTACT+AGG | 0.462675 | 4_2:+32131162 | None:intergenic |
| CTATATAACACAGGAACAAT+GGG | 0.465835 | 4_2:-32132795 | Msa0598090:intron |
| TCAAGGACGTAAAGATATCT+TGG | 0.472574 | 4_2:-32131427 | Msa0598090:CDS |
| GCTCCATAATATCTCTTGTT+GGG | 0.472661 | 4_2:+32130610 | None:intergenic |
| CCAACAGCACGAACACGTCC+AGG | 0.480395 | 4_2:+32131378 | None:intergenic |
| TCATCATTATCCTCTGGTAT+AGG | 0.483406 | 4_2:+32131111 | None:intergenic |
| CCTATGCGTGTGAACGTTGG+AGG | 0.488622 | 4_2:-32132724 | Msa0598090:CDS |
| CGGTACTAGGAGAACATGTT+GGG | 0.495155 | 4_2:+32131175 | None:intergenic |
| CAAGATCTGGGAAGATATCA+TGG | 0.496317 | 4_2:-32132883 | Msa0598090:intron |
| ATGTCCTCATCATTATCCTC+TGG | 0.503062 | 4_2:+32131105 | None:intergenic |
| GATATACCTGCAAGCACAAA+AGG | 0.504357 | 4_2:-32131153 | Msa0598090:CDS |
| GGACGTGTTCGTGCTGTTGG+TGG | 0.506839 | 4_2:-32131375 | Msa0598090:CDS |
| CCTGGACGTGTTCGTGCTGT+TGG | 0.508136 | 4_2:-32131378 | Msa0598090:CDS |
| AGCTCCATAATATCTCTTGT+TGG | 0.508698 | 4_2:+32130609 | None:intergenic |
| CACCAAAACGCCATGAGAAG+TGG | 0.508813 | 4_2:-32132318 | Msa0598090:CDS |
| AGGGCACGACAAAAGTCATC+AGG | 0.510260 | 4_2:-32132292 | Msa0598090:CDS |
| CGTGCTGTTGGTGGAGGTGT+GGG | 0.511597 | 4_2:-32131366 | Msa0598090:CDS |
| GCCATTTAATGAAAGTGTTG+AGG | 0.512666 | 4_2:+32130890 | None:intergenic |
| GATATCTTGGCGGAAGCGAT+CGG | 0.514136 | 4_2:-32131414 | Msa0598090:CDS |
| TCGGTACTAGGAGAACATGT+TGG | 0.515851 | 4_2:+32131174 | None:intergenic |
| TATTGATGTGGAAACATGGC+AGG | 0.516111 | 4_2:-32132621 | Msa0598090:CDS |
| TCATTCAAATCGAACTTCAC+AGG | 0.517008 | 4_2:+32130651 | None:intergenic |
| ACCTTTGTCACCTCATCTAT+GGG | 0.517048 | 4_2:+32130922 | None:intergenic |
| AAGATGATCTTCCATCCAAA+AGG | 0.520107 | 4_2:-32130734 | Msa0598090:CDS |
| AACAGCTGATTATGTATGGT+TGG | 0.526059 | 4_2:+32131009 | None:intergenic |
| GCTATATAACACAGGAACAA+TGG | 0.531580 | 4_2:-32132796 | Msa0598090:intron |
| GTGCCCTTCTCCACTTCTCA+TGG | 0.532074 | 4_2:+32132308 | None:intergenic |
| CATGAAAGCAGATCTTACTA+AGG | 0.535133 | 4_2:-32131265 | Msa0598090:CDS |
| CGTGTTCGTGCTGTTGGTGG+AGG | 0.538499 | 4_2:-32131372 | Msa0598090:CDS |
| ATTGAAAACAGGTGAGGGAG+AGG | 0.550218 | 4_2:+32131305 | None:intergenic |
| CAAGGACTCTTTGTTCCTCA+AGG | 0.553098 | 4_2:-32131444 | Msa0598090:intron |
| TCGTGCTGTTGGTGGAGGTG+TGG | 0.561326 | 4_2:-32131367 | Msa0598090:CDS |
| TCACCTCATCTATGGGCATG+GGG | 0.561988 | 4_2:+32130929 | None:intergenic |
| TTGCTATTGAAAACAGGTGA+GGG | 0.562591 | 4_2:+32131300 | None:intergenic |
| ATAGATGAGGTGACAAAGGT+TGG | 0.567258 | 4_2:-32130919 | Msa0598090:CDS |
| TAACAGGAGAAAAGAAATAG+GGG | 0.567601 | 4_2:-32132484 | Msa0598090:intron |
| AACGCCATGAGAAGTGGAGA+AGG | 0.573336 | 4_2:-32132312 | Msa0598090:CDS |
| TGCCCTCACAACTTGTCTCG+TGG | 0.576996 | 4_2:-32132436 | Msa0598090:CDS |
| AGATCTTACTAAGGAGATCA+GGG | 0.579172 | 4_2:-32131256 | Msa0598090:CDS |
| TCAGCTGTTAGAAAATGGTA+TGG | 0.595575 | 4_2:-32130995 | Msa0598090:CDS |
| AATTTATTGATGTGGAAACA+TGG | 0.599808 | 4_2:-32132625 | Msa0598090:CDS |
| GGCAGGAGTTTATTAAGACG+CGG | 0.602815 | 4_2:-32132604 | Msa0598090:CDS |
| GACTGTTAAAGACAAGATCT+GGG | 0.603184 | 4_2:-32132895 | Msa0598090:CDS |
| GCAGGAGTTTATTAAGACGC+GGG | 0.605793 | 4_2:-32132603 | Msa0598090:CDS |
| CTATGCGTGTGAACGTTGGA+GGG | 0.609237 | 4_2:-32132723 | Msa0598090:CDS |
| CACGATTCTACGAGTATGGG+TGG | 0.609878 | 4_2:-32130559 | Msa0598090:CDS |
| GCCCATAGATGAGGTGACAA+AGG | 0.610350 | 4_2:-32130923 | Msa0598090:CDS |
| CTCCACGAGACAAGTTGTGA+GGG | 0.615575 | 4_2:+32132434 | None:intergenic |
| CCTCCAACGTTCACACGCAT+AGG | 0.617116 | 4_2:+32132724 | None:intergenic |
| CATTTAAAACAAACCTGACA+AGG | 0.619779 | 4_2:-32132700 | Msa0598090:CDS |
| AGAAAATGGTATGGTGAGGG+TGG | 0.621632 | 4_2:-32130986 | Msa0598090:CDS |
| TCTCACGATTCTACGAGTAT+GGG | 0.624759 | 4_2:-32130562 | Msa0598090:CDS |
| ATAAATTTATATGTTCCAAG+AGG | 0.629667 | 4_2:+32132641 | None:intergenic |
| TCATTATCCTCTGGTATAGG+CGG | 0.630021 | 4_2:+32131114 | None:intergenic |
| ATCGGACAACCTGAACACCC+TGG | 0.630196 | 4_2:-32131396 | Msa0598090:CDS |
| AAGATATCTTTACGTCCTTG+AGG | 0.630357 | 4_2:+32131429 | None:intergenic |
| ACGCCATGAGAAGTGGAGAA+GGG | 0.632835 | 4_2:-32132311 | Msa0598090:CDS |
| TTTGCTATTGAAAACAGGTG+AGG | 0.635427 | 4_2:+32131299 | None:intergenic |
| AGTCCCCATGCCCATAGATG+AGG | 0.636771 | 4_2:-32130932 | Msa0598090:CDS |
| CCATAATATCTCTTGTTGGG+AGG | 0.644455 | 4_2:+32130613 | None:intergenic |
| GGAGTTTATTAAGACGCGGG+AGG | 0.664322 | 4_2:-32132600 | Msa0598090:CDS |
| AACAGGAGAAAAGAAATAGG+GGG | 0.665524 | 4_2:-32132483 | Msa0598090:intron |
| AGGACGTAAAGATATCTTGG+CGG | 0.668770 | 4_2:-32131424 | Msa0598090:CDS |
| TATCCTATGCGTGTGAACGT+TGG | 0.669950 | 4_2:-32132727 | Msa0598090:CDS |
| CCTCCACGAGACAAGTTGTG+AGG | 0.669963 | 4_2:+32132433 | None:intergenic |
| GTTAGAAAATGGTATGGTGA+GGG | 0.676123 | 4_2:-32130989 | Msa0598090:CDS |
| TGCAGCGCCGCCTATACCAG+AGG | 0.676910 | 4_2:-32131121 | Msa0598090:CDS |
| CCTCACAACTTGTCTCGTGG+AGG | 0.679685 | 4_2:-32132433 | Msa0598090:CDS |
| TATACCAGAGGATAATGATG+AGG | 0.687519 | 4_2:-32131109 | Msa0598090:CDS |
| CAACAGCACGAACACGTCCA+GGG | 0.688896 | 4_2:+32131379 | None:intergenic |
| TGTTAGAAAATGGTATGGTG+AGG | 0.703544 | 4_2:-32130990 | Msa0598090:CDS |
| CCTTATTAGAAACTAGACGT+AGG | 0.739112 | 4_2:+32130857 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATCTTAAATTGTTT+AGG | - | chr4_2:32132738-32132757 | Msa0598090:CDS | 10.0% |
| !!! | TATTTTATCTTAAATTGTTT+AGG | - | chr4_2:32132738-32132757 | Msa0598090:CDS | 10.0% |
| !! | AACATATAAATTTATTGATG+TGG | - | chr4_2:32130880-32130899 | Msa0598090:CDS | 15.0% |
| !!! | CATTTTACTTACAATTTTAT+CGG | + | chr4_2:32131279-32131298 | None:intergenic | 15.0% |
| !! | GTTAGATTATTAATTGAATT+TGG | - | chr4_2:32131350-32131369 | Msa0598090:CDS | 15.0% |
| !!! | GTTTTATACATTTCAAATTT+TGG | - | chr4_2:32131763-32131782 | Msa0598090:intron | 15.0% |
| !!! | TGTTGTTTATATTATAAGTT+TGG | - | chr4_2:32131918-32131937 | Msa0598090:intron | 15.0% |
| !! | AACATATAAATTTATTGATG+TGG | - | chr4_2:32130880-32130899 | Msa0598090:CDS | 15.0% |
| !!! | CATTTTACTTACAATTTTAT+CGG | + | chr4_2:32131279-32131298 | None:intergenic | 15.0% |
| !! | GTTAGATTATTAATTGAATT+TGG | - | chr4_2:32131350-32131369 | Msa0598090:CDS | 15.0% |
| !!! | GTTTTATACATTTCAAATTT+TGG | - | chr4_2:32131763-32131782 | Msa0598090:intron | 15.0% |
| !!! | TGTTGTTTATATTATAAGTT+TGG | - | chr4_2:32131918-32131937 | Msa0598090:intron | 15.0% |
| !!! | TTTGAAATATTATGAGTATC+AGG | + | chr4_2:32130749-32130768 | None:intergenic | 20.0% |
| !! | TTTCAAAATTGAAAGACAAA+TGG | - | chr4_2:32130762-32130781 | Msa0598090:intron | 20.0% |
| !! | ACAAGGAGATATTTAAATAA+TGG | - | chr4_2:32130830-32130849 | Msa0598090:intron | 20.0% |
| !! | CAAGGAGATATTTAAATAAT+GGG | - | chr4_2:32130831-32130850 | Msa0598090:intron | 20.0% |
| !! | ATAAATTTATATGTTCCAAG+AGG | + | chr4_2:32130875-32130894 | None:intergenic | 20.0% |
| !! | AAATAACACACAACAATTAA+CGG | + | chr4_2:32131008-32131027 | None:intergenic | 20.0% |
| !!! | AGACTATAAAATTTGAAACA+TGG | - | chr4_2:32131328-32131347 | Msa0598090:CDS | 20.0% |
| !! | GTTAGATAGTTAATTGAATT+TGG | - | chr4_2:32131372-32131391 | Msa0598090:CDS | 20.0% |
| !! | ATAATATATAACTCAAACTC+AGG | + | chr4_2:32131457-32131476 | None:intergenic | 20.0% |
| !! | CTAGTAATTTACTTATTTAC+AGG | + | chr4_2:32131573-32131592 | None:intergenic | 20.0% |
| !!! | TCAAATTTTGGAAATTCAAT+AGG | - | chr4_2:32131775-32131794 | Msa0598090:intron | 20.0% |
| !! | ATATGCAAATGTATATAAGT+TGG | - | chr4_2:32132479-32132498 | Msa0598090:CDS | 20.0% |
| !! | TATGCAAATGTATATAAGTT+GGG | - | chr4_2:32132480-32132499 | Msa0598090:CDS | 20.0% |
| !!! | TTTTCAATGTAAGATTTTTC+AGG | + | chr4_2:32132811-32132830 | None:intergenic | 20.0% |
| !!! | TTTGAAATATTATGAGTATC+AGG | + | chr4_2:32130749-32130768 | None:intergenic | 20.0% |
| !! | TTTCAAAATTGAAAGACAAA+TGG | - | chr4_2:32130762-32130781 | Msa0598090:intron | 20.0% |
| !! | ACAAGGAGATATTTAAATAA+TGG | - | chr4_2:32130830-32130849 | Msa0598090:intron | 20.0% |
| !! | CAAGGAGATATTTAAATAAT+GGG | - | chr4_2:32130831-32130850 | Msa0598090:intron | 20.0% |
| !! | ATAAATTTATATGTTCCAAG+AGG | + | chr4_2:32130875-32130894 | None:intergenic | 20.0% |
| !! | AAATAACACACAACAATTAA+CGG | + | chr4_2:32131008-32131027 | None:intergenic | 20.0% |
| !!! | AGACTATAAAATTTGAAACA+TGG | - | chr4_2:32131328-32131347 | Msa0598090:CDS | 20.0% |
| !! | GTTAGATAGTTAATTGAATT+TGG | - | chr4_2:32131372-32131391 | Msa0598090:CDS | 20.0% |
| !! | ATAATATATAACTCAAACTC+AGG | + | chr4_2:32131457-32131476 | None:intergenic | 20.0% |
| !! | CTAGTAATTTACTTATTTAC+AGG | + | chr4_2:32131573-32131592 | None:intergenic | 20.0% |
| !!! | TCAAATTTTGGAAATTCAAT+AGG | - | chr4_2:32131775-32131794 | Msa0598090:intron | 20.0% |
| !! | ATATGCAAATGTATATAAGT+TGG | - | chr4_2:32132479-32132498 | Msa0598090:CDS | 20.0% |
| !! | TATGCAAATGTATATAAGTT+GGG | - | chr4_2:32132480-32132499 | Msa0598090:CDS | 20.0% |
| !!! | TTTTCAATGTAAGATTTTTC+AGG | + | chr4_2:32132811-32132830 | None:intergenic | 20.0% |
| !! | TTTTATCTGCTATATAACAC+AGG | - | chr4_2:32130709-32130728 | Msa0598090:CDS | 25.0% |
| ! | TATTTAAATATCTCCTTGTC+AGG | + | chr4_2:32130829-32130848 | None:intergenic | 25.0% |
| ! | AATTTATTGATGTGGAAACA+TGG | - | chr4_2:32130888-32130907 | Msa0598090:CDS | 25.0% |
| !!! | TGTTGTGTGTTATTTATAAC+AGG | - | chr4_2:32131013-32131032 | Msa0598090:CDS | 25.0% |
| ! | TATAACAGGAGAAAAGAAAT+AGG | - | chr4_2:32131027-32131046 | Msa0598090:intron | 25.0% |
| ! | ATAACAGGAGAAAAGAAATA+GGG | - | chr4_2:32131028-32131047 | Msa0598090:intron | 25.0% |
| !!! | TTTTTTGATTCACAAGTGAA+TGG | - | chr4_2:32131482-32131501 | Msa0598090:intron | 25.0% |
| ! | CAAATTGTCTGGATATAATT+GGG | - | chr4_2:32131888-32131907 | Msa0598090:intron | 25.0% |
| ! | CAACATAAAAATAATCAAGC+AGG | + | chr4_2:32132021-32132040 | None:intergenic | 25.0% |
| !!! | CTGCTTGATTATTTTTATGT+TGG | - | chr4_2:32132019-32132038 | Msa0598090:intron | 25.0% |
| ! | GTTGTTGAAAAAACAAAACA+AGG | - | chr4_2:32132051-32132070 | Msa0598090:intron | 25.0% |
| !!! | ATTTGTTTGCTATTGAAAAC+AGG | + | chr4_2:32132222-32132241 | None:intergenic | 25.0% |
| ! | ATTAGTCAGCATAATTAAGT+GGG | + | chr4_2:32132719-32132738 | None:intergenic | 25.0% |
| ! | TATTAGTCAGCATAATTAAG+TGG | + | chr4_2:32132720-32132739 | None:intergenic | 25.0% |
| !!! | ACATTGAAAAGTTGATGTTA+AGG | - | chr4_2:32132821-32132840 | Msa0598090:intron | 25.0% |
| !!! | CATTGAAAAGTTGATGTTAA+GGG | - | chr4_2:32132822-32132841 | Msa0598090:intron | 25.0% |
| !! | TTTTATCTGCTATATAACAC+AGG | - | chr4_2:32130709-32130728 | Msa0598090:CDS | 25.0% |
| ! | TATTTAAATATCTCCTTGTC+AGG | + | chr4_2:32130829-32130848 | None:intergenic | 25.0% |
| ! | AATTTATTGATGTGGAAACA+TGG | - | chr4_2:32130888-32130907 | Msa0598090:CDS | 25.0% |
| !!! | TGTTGTGTGTTATTTATAAC+AGG | - | chr4_2:32131013-32131032 | Msa0598090:CDS | 25.0% |
| ! | TATAACAGGAGAAAAGAAAT+AGG | - | chr4_2:32131027-32131046 | Msa0598090:intron | 25.0% |
| ! | ATAACAGGAGAAAAGAAATA+GGG | - | chr4_2:32131028-32131047 | Msa0598090:intron | 25.0% |
| !!! | TTTTTTGATTCACAAGTGAA+TGG | - | chr4_2:32131482-32131501 | Msa0598090:intron | 25.0% |
| ! | CAAATTGTCTGGATATAATT+GGG | - | chr4_2:32131888-32131907 | Msa0598090:intron | 25.0% |
| ! | CAACATAAAAATAATCAAGC+AGG | + | chr4_2:32132021-32132040 | None:intergenic | 25.0% |
| !!! | CTGCTTGATTATTTTTATGT+TGG | - | chr4_2:32132019-32132038 | Msa0598090:intron | 25.0% |
| ! | GTTGTTGAAAAAACAAAACA+AGG | - | chr4_2:32132051-32132070 | Msa0598090:intron | 25.0% |
| !!! | ATTTGTTTGCTATTGAAAAC+AGG | + | chr4_2:32132222-32132241 | None:intergenic | 25.0% |
| ! | ATTAGTCAGCATAATTAAGT+GGG | + | chr4_2:32132719-32132738 | None:intergenic | 25.0% |
| ! | TATTAGTCAGCATAATTAAG+TGG | + | chr4_2:32132720-32132739 | None:intergenic | 25.0% |
| !!! | ACATTGAAAAGTTGATGTTA+AGG | - | chr4_2:32132821-32132840 | Msa0598090:intron | 25.0% |
| !!! | CATTGAAAAGTTGATGTTAA+GGG | - | chr4_2:32132822-32132841 | Msa0598090:intron | 25.0% |
| ! | TAGAAGCAAAGTCAGTATTT+TGG | - | chr4_2:32130570-32130589 | Msa0598090:CDS | 30.0% |
| !!! | TCAGTATTTTGGTGGATAAT+TGG | - | chr4_2:32130581-32130600 | Msa0598090:CDS | 30.0% |
| !!! | CAGTATTTTGGTGGATAATT+GGG | - | chr4_2:32130582-32130601 | Msa0598090:CDS | 30.0% |
| CAGATAAAAGAGTTAGTGTA+TGG | + | chr4_2:32130698-32130717 | None:intergenic | 30.0% | |
| CTATATAACACAGGAACAAT+GGG | - | chr4_2:32130718-32130737 | Msa0598090:CDS | 30.0% | |
| ! | CATTTAAAACAAACCTGACA+AGG | - | chr4_2:32130813-32130832 | Msa0598090:intron | 30.0% |
| TAACAGGAGAAAAGAAATAG+GGG | - | chr4_2:32131029-32131048 | Msa0598090:intron | 30.0% | |
| !! | CTACAATACAAAAGCATTCA+TGG | + | chr4_2:32131519-32131538 | None:intergenic | 30.0% |
| TACTTTATTAAAGCCACTGA+TGG | - | chr4_2:32131597-32131616 | Msa0598090:intron | 30.0% | |
| CTTTAATTCTTTAGCTAGCA+AGG | - | chr4_2:32131689-32131708 | Msa0598090:intron | 30.0% | |
| TAGGTAATAAAGATGACAAG+AGG | - | chr4_2:32131794-32131813 | Msa0598090:intron | 30.0% | |
| TAATAAAGATGACAAGAGGT+GGG | - | chr4_2:32131798-32131817 | Msa0598090:intron | 30.0% | |
| GTACAAATTAGCAAATTGTC+TGG | - | chr4_2:32131877-32131896 | Msa0598090:intron | 30.0% | |
| GCAAATTGTCTGGATATAAT+TGG | - | chr4_2:32131887-32131906 | Msa0598090:intron | 30.0% | |
| CATATAATTCACACTCTTCT+GGG | + | chr4_2:32132434-32132453 | None:intergenic | 30.0% | |
| ACATATAATTCACACTCTTC+TGG | + | chr4_2:32132435-32132454 | None:intergenic | 30.0% | |
| TTCTAACAGCTGATTATGTA+TGG | + | chr4_2:32132511-32132530 | None:intergenic | 30.0% | |
| CATAATCAGCTGTTAGAAAA+TGG | - | chr4_2:32132513-32132532 | Msa0598090:intron | 30.0% | |
| !! | CCATTTAATGAAAGTGTTGA+GGG | + | chr4_2:32132625-32132644 | None:intergenic | 30.0% |
| TGTCTTTATCTATTTGCACT+TGG | - | chr4_2:32132692-32132711 | Msa0598090:CDS | 30.0% | |
| GTCTTTATCTATTTGCACTT+GGG | - | chr4_2:32132693-32132712 | Msa0598090:CDS | 30.0% | |
| ! | TAGAAGCAAAGTCAGTATTT+TGG | - | chr4_2:32130570-32130589 | Msa0598090:CDS | 30.0% |
| !!! | TCAGTATTTTGGTGGATAAT+TGG | - | chr4_2:32130581-32130600 | Msa0598090:CDS | 30.0% |
| !!! | CAGTATTTTGGTGGATAATT+GGG | - | chr4_2:32130582-32130601 | Msa0598090:CDS | 30.0% |
| CAGATAAAAGAGTTAGTGTA+TGG | + | chr4_2:32130698-32130717 | None:intergenic | 30.0% | |
| CTATATAACACAGGAACAAT+GGG | - | chr4_2:32130718-32130737 | Msa0598090:CDS | 30.0% | |
| ! | CATTTAAAACAAACCTGACA+AGG | - | chr4_2:32130813-32130832 | Msa0598090:intron | 30.0% |
| TAACAGGAGAAAAGAAATAG+GGG | - | chr4_2:32131029-32131048 | Msa0598090:intron | 30.0% | |
| !! | CTACAATACAAAAGCATTCA+TGG | + | chr4_2:32131519-32131538 | None:intergenic | 30.0% |
| TACTTTATTAAAGCCACTGA+TGG | - | chr4_2:32131597-32131616 | Msa0598090:intron | 30.0% | |
| CTTTAATTCTTTAGCTAGCA+AGG | - | chr4_2:32131689-32131708 | Msa0598090:intron | 30.0% | |
| TAGGTAATAAAGATGACAAG+AGG | - | chr4_2:32131794-32131813 | Msa0598090:intron | 30.0% | |
| TAATAAAGATGACAAGAGGT+GGG | - | chr4_2:32131798-32131817 | Msa0598090:intron | 30.0% | |
| GTACAAATTAGCAAATTGTC+TGG | - | chr4_2:32131877-32131896 | Msa0598090:intron | 30.0% | |
| GCAAATTGTCTGGATATAAT+TGG | - | chr4_2:32131887-32131906 | Msa0598090:intron | 30.0% | |
| CATATAATTCACACTCTTCT+GGG | + | chr4_2:32132434-32132453 | None:intergenic | 30.0% | |
| ACATATAATTCACACTCTTC+TGG | + | chr4_2:32132435-32132454 | None:intergenic | 30.0% | |
| TTCTAACAGCTGATTATGTA+TGG | + | chr4_2:32132511-32132530 | None:intergenic | 30.0% | |
| CATAATCAGCTGTTAGAAAA+TGG | - | chr4_2:32132513-32132532 | Msa0598090:intron | 30.0% | |
| !! | CCATTTAATGAAAGTGTTGA+GGG | + | chr4_2:32132625-32132644 | None:intergenic | 30.0% |
| TGTCTTTATCTATTTGCACT+TGG | - | chr4_2:32132692-32132711 | Msa0598090:CDS | 30.0% | |
| GTCTTTATCTATTTGCACTT+GGG | - | chr4_2:32132693-32132712 | Msa0598090:CDS | 30.0% | |
| !! | AAGCAAAGTCAGTATTTTGG+TGG | - | chr4_2:32130573-32130592 | Msa0598090:CDS | 35.0% |
| AGACTGTTAAAGACAAGATC+TGG | - | chr4_2:32130617-32130636 | Msa0598090:CDS | 35.0% | |
| GACTGTTAAAGACAAGATCT+GGG | - | chr4_2:32130618-32130637 | Msa0598090:CDS | 35.0% | |
| GCTATATAACACAGGAACAA+TGG | - | chr4_2:32130717-32130736 | Msa0598090:CDS | 35.0% | |
| !! | ATCCATACTTTCTGGTTTGT+TGG | - | chr4_2:32130936-32130955 | Msa0598090:CDS | 35.0% |
| AACAGGAGAAAAGAAATAGG+GGG | - | chr4_2:32131030-32131049 | Msa0598090:intron | 35.0% | |
| ! | AAATAGGGGGAAATTGATTC+AGG | - | chr4_2:32131043-32131062 | Msa0598090:intron | 35.0% |
| !! | CTGAATGACTTGAGTTGAAT+TGG | - | chr4_2:32131407-32131426 | Msa0598090:CDS | 35.0% |
| GTAGACAGTAAAATGCCATA+GGG | + | chr4_2:32131741-32131760 | None:intergenic | 35.0% | |
| AGTAGACAGTAAAATGCCAT+AGG | + | chr4_2:32131742-32131761 | None:intergenic | 35.0% | |
| GTAATAAAGATGACAAGAGG+TGG | - | chr4_2:32131797-32131816 | Msa0598090:intron | 35.0% | |
| AATAAAGATGACAAGAGGTG+GGG | - | chr4_2:32131799-32131818 | Msa0598090:intron | 35.0% | |
| ! | TGCACAATTTCCAGTTCTAA+GGG | + | chr4_2:32131854-32131873 | None:intergenic | 35.0% |
| ATGCACAATTTCCAGTTCTA+AGG | + | chr4_2:32131855-32131874 | None:intergenic | 35.0% | |
| CAGGATGCATTTAAATTCCA+AGG | + | chr4_2:32132002-32132021 | None:intergenic | 35.0% | |
| AAGATATCTTTACGTCCTTG+AGG | + | chr4_2:32132087-32132106 | None:intergenic | 35.0% | |
| TCAAGGACGTAAAGATATCT+TGG | - | chr4_2:32132086-32132105 | Msa0598090:intron | 35.0% | |
| ! | GTGGGAATTAGGCAATATTT+TGG | - | chr4_2:32132165-32132184 | Msa0598090:intron | 35.0% |
| TTTGGTCCAGTTTCTCATTA+TGG | - | chr4_2:32132183-32132202 | Msa0598090:intron | 35.0% | |
| ! | TTGCTATTGAAAACAGGTGA+GGG | + | chr4_2:32132216-32132235 | None:intergenic | 35.0% |
| !! | TTTGCTATTGAAAACAGGTG+AGG | + | chr4_2:32132217-32132236 | None:intergenic | 35.0% |
| CATGAAAGCAGATCTTACTA+AGG | - | chr4_2:32132248-32132267 | Msa0598090:intron | 35.0% | |
| AGATCTTACTAAGGAGATCA+GGG | - | chr4_2:32132257-32132276 | Msa0598090:intron | 35.0% | |
| GAGAACATGTTGGGAAATTT+GGG | + | chr4_2:32132332-32132351 | None:intergenic | 35.0% | |
| ! | TTTTGTGCTTGCAGGTATAT+CGG | + | chr4_2:32132361-32132380 | None:intergenic | 35.0% |
| TCATCATTATCCTCTGGTAT+AGG | + | chr4_2:32132405-32132424 | None:intergenic | 35.0% | |
| TATACCAGAGGATAATGATG+AGG | - | chr4_2:32132404-32132423 | Msa0598090:CDS | 35.0% | |
| AACAGCTGATTATGTATGGT+TGG | + | chr4_2:32132507-32132526 | None:intergenic | 35.0% | |
| TCAGCTGTTAGAAAATGGTA+TGG | - | chr4_2:32132518-32132537 | Msa0598090:intron | 35.0% | |
| TGTTAGAAAATGGTATGGTG+AGG | - | chr4_2:32132523-32132542 | Msa0598090:intron | 35.0% | |
| GTTAGAAAATGGTATGGTGA+GGG | - | chr4_2:32132524-32132543 | Msa0598090:intron | 35.0% | |
| CCCTCAACACTTTCATTAAA+TGG | - | chr4_2:32132622-32132641 | Msa0598090:CDS | 35.0% | |
| !! | GCCATTTAATGAAAGTGTTG+AGG | + | chr4_2:32132626-32132645 | None:intergenic | 35.0% |
| CCTTATTAGAAACTAGACGT+AGG | + | chr4_2:32132659-32132678 | None:intergenic | 35.0% | |
| ! | CCTACGTCTAGTTTCTAATA+AGG | - | chr4_2:32132656-32132675 | Msa0598090:CDS | 35.0% |
| AAGATGATCTTCCATCCAAA+AGG | - | chr4_2:32132779-32132798 | Msa0598090:CDS | 35.0% | |
| !!! | TTTTTCAGGTTCTGACCTTT+TGG | + | chr4_2:32132797-32132816 | None:intergenic | 35.0% |
| TCATTCAAATCGAACTTCAC+AGG | + | chr4_2:32132865-32132884 | None:intergenic | 35.0% | |
| GCTCCATAATATCTCTTGTT+GGG | + | chr4_2:32132906-32132925 | None:intergenic | 35.0% | |
| AGCTCCATAATATCTCTTGT+TGG | + | chr4_2:32132907-32132926 | None:intergenic | 35.0% | |
| !! | AAGCAAAGTCAGTATTTTGG+TGG | - | chr4_2:32130573-32130592 | Msa0598090:CDS | 35.0% |
| AGACTGTTAAAGACAAGATC+TGG | - | chr4_2:32130617-32130636 | Msa0598090:CDS | 35.0% | |
| GACTGTTAAAGACAAGATCT+GGG | - | chr4_2:32130618-32130637 | Msa0598090:CDS | 35.0% | |
| GCTATATAACACAGGAACAA+TGG | - | chr4_2:32130717-32130736 | Msa0598090:CDS | 35.0% | |
| !! | ATCCATACTTTCTGGTTTGT+TGG | - | chr4_2:32130936-32130955 | Msa0598090:CDS | 35.0% |
| AACAGGAGAAAAGAAATAGG+GGG | - | chr4_2:32131030-32131049 | Msa0598090:intron | 35.0% | |
| ! | AAATAGGGGGAAATTGATTC+AGG | - | chr4_2:32131043-32131062 | Msa0598090:intron | 35.0% |
| !! | CTGAATGACTTGAGTTGAAT+TGG | - | chr4_2:32131407-32131426 | Msa0598090:CDS | 35.0% |
| GTAGACAGTAAAATGCCATA+GGG | + | chr4_2:32131741-32131760 | None:intergenic | 35.0% | |
| AGTAGACAGTAAAATGCCAT+AGG | + | chr4_2:32131742-32131761 | None:intergenic | 35.0% | |
| GTAATAAAGATGACAAGAGG+TGG | - | chr4_2:32131797-32131816 | Msa0598090:intron | 35.0% | |
| AATAAAGATGACAAGAGGTG+GGG | - | chr4_2:32131799-32131818 | Msa0598090:intron | 35.0% | |
| ! | TGCACAATTTCCAGTTCTAA+GGG | + | chr4_2:32131854-32131873 | None:intergenic | 35.0% |
| ATGCACAATTTCCAGTTCTA+AGG | + | chr4_2:32131855-32131874 | None:intergenic | 35.0% | |
| CAGGATGCATTTAAATTCCA+AGG | + | chr4_2:32132002-32132021 | None:intergenic | 35.0% | |
| AAGATATCTTTACGTCCTTG+AGG | + | chr4_2:32132087-32132106 | None:intergenic | 35.0% | |
| TCAAGGACGTAAAGATATCT+TGG | - | chr4_2:32132086-32132105 | Msa0598090:intron | 35.0% | |
| ! | GTGGGAATTAGGCAATATTT+TGG | - | chr4_2:32132165-32132184 | Msa0598090:intron | 35.0% |
| TTTGGTCCAGTTTCTCATTA+TGG | - | chr4_2:32132183-32132202 | Msa0598090:intron | 35.0% | |
| ! | TTGCTATTGAAAACAGGTGA+GGG | + | chr4_2:32132216-32132235 | None:intergenic | 35.0% |
| !! | TTTGCTATTGAAAACAGGTG+AGG | + | chr4_2:32132217-32132236 | None:intergenic | 35.0% |
| CATGAAAGCAGATCTTACTA+AGG | - | chr4_2:32132248-32132267 | Msa0598090:intron | 35.0% | |
| AGATCTTACTAAGGAGATCA+GGG | - | chr4_2:32132257-32132276 | Msa0598090:intron | 35.0% | |
| GAGAACATGTTGGGAAATTT+GGG | + | chr4_2:32132332-32132351 | None:intergenic | 35.0% | |
| ! | TTTTGTGCTTGCAGGTATAT+CGG | + | chr4_2:32132361-32132380 | None:intergenic | 35.0% |
| TCATCATTATCCTCTGGTAT+AGG | + | chr4_2:32132405-32132424 | None:intergenic | 35.0% | |
| TATACCAGAGGATAATGATG+AGG | - | chr4_2:32132404-32132423 | Msa0598090:CDS | 35.0% | |
| AACAGCTGATTATGTATGGT+TGG | + | chr4_2:32132507-32132526 | None:intergenic | 35.0% | |
| TCAGCTGTTAGAAAATGGTA+TGG | - | chr4_2:32132518-32132537 | Msa0598090:intron | 35.0% | |
| TGTTAGAAAATGGTATGGTG+AGG | - | chr4_2:32132523-32132542 | Msa0598090:intron | 35.0% | |
| GTTAGAAAATGGTATGGTGA+GGG | - | chr4_2:32132524-32132543 | Msa0598090:intron | 35.0% | |
| CCCTCAACACTTTCATTAAA+TGG | - | chr4_2:32132622-32132641 | Msa0598090:CDS | 35.0% | |
| !! | GCCATTTAATGAAAGTGTTG+AGG | + | chr4_2:32132626-32132645 | None:intergenic | 35.0% |
| CCTTATTAGAAACTAGACGT+AGG | + | chr4_2:32132659-32132678 | None:intergenic | 35.0% | |
| ! | CCTACGTCTAGTTTCTAATA+AGG | - | chr4_2:32132656-32132675 | Msa0598090:CDS | 35.0% |
| AAGATGATCTTCCATCCAAA+AGG | - | chr4_2:32132779-32132798 | Msa0598090:CDS | 35.0% | |
| !!! | TTTTTCAGGTTCTGACCTTT+TGG | + | chr4_2:32132797-32132816 | None:intergenic | 35.0% |
| TCATTCAAATCGAACTTCAC+AGG | + | chr4_2:32132865-32132884 | None:intergenic | 35.0% | |
| GCTCCATAATATCTCTTGTT+GGG | + | chr4_2:32132906-32132925 | None:intergenic | 35.0% | |
| AGCTCCATAATATCTCTTGT+TGG | + | chr4_2:32132907-32132926 | None:intergenic | 35.0% | |
| CAAGATCTGGGAAGATATCA+TGG | - | chr4_2:32130630-32130649 | Msa0598090:CDS | 40.0% | |
| TTGAGTGACAAATCTCCTCT+TGG | - | chr4_2:32130857-32130876 | Msa0598090:intron | 40.0% | |
| TATTGATGTGGAAACATGGC+AGG | - | chr4_2:32130892-32130911 | Msa0598090:CDS | 40.0% | |
| GTCCAACAAACCAGAAAGTA+TGG | + | chr4_2:32130941-32130960 | None:intergenic | 40.0% | |
| GTCAGAAGAAACACGTTGTA+TGG | - | chr4_2:32131253-32131272 | Msa0598090:CDS | 40.0% | |
| CCATAGGGAATACATGCTTT+AGG | + | chr4_2:32131726-32131745 | None:intergenic | 40.0% | |
| CCTAAAGCATGTATTCCCTA+TGG | - | chr4_2:32131723-32131742 | Msa0598090:intron | 40.0% | |
| ATAAAGATGACAAGAGGTGG+GGG | - | chr4_2:32131800-32131819 | Msa0598090:intron | 40.0% | |
| GTAGAAAATGCCCTTAGAAC+TGG | - | chr4_2:32131841-32131860 | Msa0598090:intron | 40.0% | |
| AGCAGCACAAACAAAAACAG+TGG | + | chr4_2:32131968-32131987 | None:intergenic | 40.0% | |
| GCTGCTACAATTACAAACCT+TGG | - | chr4_2:32131982-32132001 | Msa0598090:intron | 40.0% | |
| AGGACGTAAAGATATCTTGG+CGG | - | chr4_2:32132089-32132108 | Msa0598090:intron | 40.0% | |
| CAGATCTTACTAAGGAGATC+AGG | - | chr4_2:32132256-32132275 | Msa0598090:intron | 40.0% | |
| GCGGGATTTATCATCTATTC+CGG | - | chr4_2:32132290-32132309 | Msa0598090:CDS | 40.0% | |
| GGAGAACATGTTGGGAAATT+TGG | + | chr4_2:32132333-32132352 | None:intergenic | 40.0% | |
| GATATACCTGCAAGCACAAA+AGG | - | chr4_2:32132360-32132379 | Msa0598090:CDS | 40.0% | |
| TCATTATCCTCTGGTATAGG+CGG | + | chr4_2:32132402-32132421 | None:intergenic | 40.0% | |
| ATGTCCTCATCATTATCCTC+TGG | + | chr4_2:32132411-32132430 | None:intergenic | 40.0% | |
| ACCTTTGTCACCTCATCTAT+GGG | + | chr4_2:32132594-32132613 | None:intergenic | 40.0% | |
| AACCTTTGTCACCTCATCTA+TGG | + | chr4_2:32132595-32132614 | None:intergenic | 40.0% | |
| ATAGATGAGGTGACAAAGGT+TGG | - | chr4_2:32132594-32132613 | Msa0598090:CDS | 40.0% | |
| ! | ACTAGACGTAGGAGTCTTTT+TGG | + | chr4_2:32132648-32132667 | None:intergenic | 40.0% |
| CCATAATATCTCTTGTTGGG+AGG | + | chr4_2:32132903-32132922 | None:intergenic | 40.0% | |
| CCTCCCAACAAGAGATATTA+TGG | - | chr4_2:32132900-32132919 | Msa0598090:CDS | 40.0% | |
| TCTCACGATTCTACGAGTAT+GGG | - | chr4_2:32132951-32132970 | Msa0598090:CDS | 40.0% | |
| CAAGATCTGGGAAGATATCA+TGG | - | chr4_2:32130630-32130649 | Msa0598090:CDS | 40.0% | |
| TTGAGTGACAAATCTCCTCT+TGG | - | chr4_2:32130857-32130876 | Msa0598090:intron | 40.0% | |
| TATTGATGTGGAAACATGGC+AGG | - | chr4_2:32130892-32130911 | Msa0598090:CDS | 40.0% | |
| GTCCAACAAACCAGAAAGTA+TGG | + | chr4_2:32130941-32130960 | None:intergenic | 40.0% | |
| GTCAGAAGAAACACGTTGTA+TGG | - | chr4_2:32131253-32131272 | Msa0598090:CDS | 40.0% | |
| CCATAGGGAATACATGCTTT+AGG | + | chr4_2:32131726-32131745 | None:intergenic | 40.0% | |
| CCTAAAGCATGTATTCCCTA+TGG | - | chr4_2:32131723-32131742 | Msa0598090:intron | 40.0% | |
| ATAAAGATGACAAGAGGTGG+GGG | - | chr4_2:32131800-32131819 | Msa0598090:intron | 40.0% | |
| GTAGAAAATGCCCTTAGAAC+TGG | - | chr4_2:32131841-32131860 | Msa0598090:intron | 40.0% | |
| AGCAGCACAAACAAAAACAG+TGG | + | chr4_2:32131968-32131987 | None:intergenic | 40.0% | |
| GCTGCTACAATTACAAACCT+TGG | - | chr4_2:32131982-32132001 | Msa0598090:intron | 40.0% | |
| AGGACGTAAAGATATCTTGG+CGG | - | chr4_2:32132089-32132108 | Msa0598090:intron | 40.0% | |
| CAGATCTTACTAAGGAGATC+AGG | - | chr4_2:32132256-32132275 | Msa0598090:intron | 40.0% | |
| GCGGGATTTATCATCTATTC+CGG | - | chr4_2:32132290-32132309 | Msa0598090:CDS | 40.0% | |
| GGAGAACATGTTGGGAAATT+TGG | + | chr4_2:32132333-32132352 | None:intergenic | 40.0% | |
| GATATACCTGCAAGCACAAA+AGG | - | chr4_2:32132360-32132379 | Msa0598090:CDS | 40.0% | |
| TCATTATCCTCTGGTATAGG+CGG | + | chr4_2:32132402-32132421 | None:intergenic | 40.0% | |
| ATGTCCTCATCATTATCCTC+TGG | + | chr4_2:32132411-32132430 | None:intergenic | 40.0% | |
| ACCTTTGTCACCTCATCTAT+GGG | + | chr4_2:32132594-32132613 | None:intergenic | 40.0% | |
| AACCTTTGTCACCTCATCTA+TGG | + | chr4_2:32132595-32132614 | None:intergenic | 40.0% | |
| ATAGATGAGGTGACAAAGGT+TGG | - | chr4_2:32132594-32132613 | Msa0598090:CDS | 40.0% | |
| ! | ACTAGACGTAGGAGTCTTTT+TGG | + | chr4_2:32132648-32132667 | None:intergenic | 40.0% |
| CCATAATATCTCTTGTTGGG+AGG | + | chr4_2:32132903-32132922 | None:intergenic | 40.0% | |
| CCTCCCAACAAGAGATATTA+TGG | - | chr4_2:32132900-32132919 | Msa0598090:CDS | 40.0% | |
| TCTCACGATTCTACGAGTAT+GGG | - | chr4_2:32132951-32132970 | Msa0598090:CDS | 40.0% | |
| TATCCTATGCGTGTGAACGT+TGG | - | chr4_2:32130786-32130805 | Msa0598090:intron | 45.0% | |
| GGCAGGAGTTTATTAAGACG+CGG | - | chr4_2:32130909-32130928 | Msa0598090:CDS | 45.0% | |
| GCAGGAGTTTATTAAGACGC+GGG | - | chr4_2:32130910-32130929 | Msa0598090:CDS | 45.0% | |
| !! | ACTTCTCATGGCGTTTTGGT+GGG | + | chr4_2:32131196-32131215 | None:intergenic | 45.0% |
| CAAGGACTCTTTGTTCCTCA+AGG | - | chr4_2:32132069-32132088 | Msa0598090:intron | 45.0% | |
| ! | GAGGCACCATAATGAGAAAC+TGG | + | chr4_2:32132192-32132211 | None:intergenic | 45.0% |
| ATTGAAAACAGGTGAGGGAG+AGG | + | chr4_2:32132211-32132230 | None:intergenic | 45.0% | |
| AGATCAGGGATCAAGTGATG+CGG | - | chr4_2:32132271-32132290 | Msa0598090:CDS | 45.0% | |
| GGGAAATGCTGAGAGAAATC+CGG | + | chr4_2:32132312-32132331 | None:intergenic | 45.0% | |
| CGGTACTAGGAGAACATGTT+GGG | + | chr4_2:32132341-32132360 | None:intergenic | 45.0% | |
| TCGGTACTAGGAGAACATGT+TGG | + | chr4_2:32132342-32132361 | None:intergenic | 45.0% | |
| CTTGCAGGTATATCGGTACT+AGG | + | chr4_2:32132354-32132373 | None:intergenic | 45.0% | |
| ! | CAACTACCTTTTGTGCTTGC+AGG | + | chr4_2:32132369-32132388 | None:intergenic | 45.0% |
| AGAAAATGGTATGGTGAGGG+TGG | - | chr4_2:32132527-32132546 | Msa0598090:intron | 45.0% | |
| !! | TCAGGTTCTGACCTTTTGGA+TGG | + | chr4_2:32132793-32132812 | None:intergenic | 45.0% |
| GTCTCACGATTCTACGAGTA+TGG | - | chr4_2:32132950-32132969 | Msa0598090:CDS | 45.0% | |
| TATCCTATGCGTGTGAACGT+TGG | - | chr4_2:32130786-32130805 | Msa0598090:intron | 45.0% | |
| GGCAGGAGTTTATTAAGACG+CGG | - | chr4_2:32130909-32130928 | Msa0598090:CDS | 45.0% | |
| GCAGGAGTTTATTAAGACGC+GGG | - | chr4_2:32130910-32130929 | Msa0598090:CDS | 45.0% | |
| !! | ACTTCTCATGGCGTTTTGGT+GGG | + | chr4_2:32131196-32131215 | None:intergenic | 45.0% |
| CAAGGACTCTTTGTTCCTCA+AGG | - | chr4_2:32132069-32132088 | Msa0598090:intron | 45.0% | |
| ! | GAGGCACCATAATGAGAAAC+TGG | + | chr4_2:32132192-32132211 | None:intergenic | 45.0% |
| ATTGAAAACAGGTGAGGGAG+AGG | + | chr4_2:32132211-32132230 | None:intergenic | 45.0% | |
| AGATCAGGGATCAAGTGATG+CGG | - | chr4_2:32132271-32132290 | Msa0598090:CDS | 45.0% | |
| GGGAAATGCTGAGAGAAATC+CGG | + | chr4_2:32132312-32132331 | None:intergenic | 45.0% | |
| CGGTACTAGGAGAACATGTT+GGG | + | chr4_2:32132341-32132360 | None:intergenic | 45.0% | |
| TCGGTACTAGGAGAACATGT+TGG | + | chr4_2:32132342-32132361 | None:intergenic | 45.0% | |
| CTTGCAGGTATATCGGTACT+AGG | + | chr4_2:32132354-32132373 | None:intergenic | 45.0% | |
| ! | CAACTACCTTTTGTGCTTGC+AGG | + | chr4_2:32132369-32132388 | None:intergenic | 45.0% |
| AGAAAATGGTATGGTGAGGG+TGG | - | chr4_2:32132527-32132546 | Msa0598090:intron | 45.0% | |
| !! | TCAGGTTCTGACCTTTTGGA+TGG | + | chr4_2:32132793-32132812 | None:intergenic | 45.0% |
| GTCTCACGATTCTACGAGTA+TGG | - | chr4_2:32132950-32132969 | Msa0598090:CDS | 45.0% | |
| CTATGCGTGTGAACGTTGGA+GGG | - | chr4_2:32130790-32130809 | Msa0598090:intron | 50.0% | |
| GGAGTTTATTAAGACGCGGG+AGG | - | chr4_2:32130913-32130932 | Msa0598090:CDS | 50.0% | |
| CTCCACGAGACAAGTTGTGA+GGG | + | chr4_2:32131082-32131101 | None:intergenic | 50.0% | |
| !! | CTTCTCATGGCGTTTTGGTG+GGG | + | chr4_2:32131195-32131214 | None:intergenic | 50.0% |
| ! | CACTTCTCATGGCGTTTTGG+TGG | + | chr4_2:32131197-32131216 | None:intergenic | 50.0% |
| CACCAAAACGCCATGAGAAG+TGG | - | chr4_2:32131195-32131214 | Msa0598090:intron | 50.0% | |
| ! | CTCCACTTCTCATGGCGTTT+TGG | + | chr4_2:32131200-32131219 | None:intergenic | 50.0% |
| AACGCCATGAGAAGTGGAGA+AGG | - | chr4_2:32131201-32131220 | Msa0598090:intron | 50.0% | |
| ACGCCATGAGAAGTGGAGAA+GGG | - | chr4_2:32131202-32131221 | Msa0598090:intron | 50.0% | |
| AGGGCACGACAAAAGTCATC+AGG | - | chr4_2:32131221-32131240 | Msa0598090:intron | 50.0% | |
| TGTGTACAGCTCACCATCAG+TGG | + | chr4_2:32131613-32131632 | None:intergenic | 50.0% | |
| GATATCTTGGCGGAAGCGAT+CGG | - | chr4_2:32132099-32132118 | Msa0598090:intron | 50.0% | |
| ! | TTGGTGGAGGTGTGGGAATT+AGG | - | chr4_2:32132154-32132173 | Msa0598090:intron | 50.0% |
| GATCAGGGATCAAGTGATGC+GGG | - | chr4_2:32132272-32132291 | Msa0598090:CDS | 50.0% | |
| TCACCTCATCTATGGGCATG+GGG | + | chr4_2:32132587-32132606 | None:intergenic | 50.0% | |
| GTCACCTCATCTATGGGCAT+GGG | + | chr4_2:32132588-32132607 | None:intergenic | 50.0% | |
| TGTCACCTCATCTATGGGCA+TGG | + | chr4_2:32132589-32132608 | None:intergenic | 50.0% | |
| GCCCATAGATGAGGTGACAA+AGG | - | chr4_2:32132590-32132609 | Msa0598090:CDS | 50.0% | |
| CACGATTCTACGAGTATGGG+TGG | - | chr4_2:32132954-32132973 | Msa0598090:CDS | 50.0% | |
| CTATGCGTGTGAACGTTGGA+GGG | - | chr4_2:32130790-32130809 | Msa0598090:intron | 50.0% | |
| GGAGTTTATTAAGACGCGGG+AGG | - | chr4_2:32130913-32130932 | Msa0598090:CDS | 50.0% | |
| CTCCACGAGACAAGTTGTGA+GGG | + | chr4_2:32131082-32131101 | None:intergenic | 50.0% | |
| !! | CTTCTCATGGCGTTTTGGTG+GGG | + | chr4_2:32131195-32131214 | None:intergenic | 50.0% |
| ! | CACTTCTCATGGCGTTTTGG+TGG | + | chr4_2:32131197-32131216 | None:intergenic | 50.0% |
| CACCAAAACGCCATGAGAAG+TGG | - | chr4_2:32131195-32131214 | Msa0598090:intron | 50.0% | |
| ! | CTCCACTTCTCATGGCGTTT+TGG | + | chr4_2:32131200-32131219 | None:intergenic | 50.0% |
| AACGCCATGAGAAGTGGAGA+AGG | - | chr4_2:32131201-32131220 | Msa0598090:intron | 50.0% | |
| ACGCCATGAGAAGTGGAGAA+GGG | - | chr4_2:32131202-32131221 | Msa0598090:intron | 50.0% | |
| AGGGCACGACAAAAGTCATC+AGG | - | chr4_2:32131221-32131240 | Msa0598090:intron | 50.0% | |
| TGTGTACAGCTCACCATCAG+TGG | + | chr4_2:32131613-32131632 | None:intergenic | 50.0% | |
| GATATCTTGGCGGAAGCGAT+CGG | - | chr4_2:32132099-32132118 | Msa0598090:intron | 50.0% | |
| ! | TTGGTGGAGGTGTGGGAATT+AGG | - | chr4_2:32132154-32132173 | Msa0598090:intron | 50.0% |
| GATCAGGGATCAAGTGATGC+GGG | - | chr4_2:32132272-32132291 | Msa0598090:CDS | 50.0% | |
| TCACCTCATCTATGGGCATG+GGG | + | chr4_2:32132587-32132606 | None:intergenic | 50.0% | |
| GTCACCTCATCTATGGGCAT+GGG | + | chr4_2:32132588-32132607 | None:intergenic | 50.0% | |
| TGTCACCTCATCTATGGGCA+TGG | + | chr4_2:32132589-32132608 | None:intergenic | 50.0% | |
| GCCCATAGATGAGGTGACAA+AGG | - | chr4_2:32132590-32132609 | Msa0598090:CDS | 50.0% | |
| CACGATTCTACGAGTATGGG+TGG | - | chr4_2:32132954-32132973 | Msa0598090:CDS | 50.0% | |
| CCTCCAACGTTCACACGCAT+AGG | + | chr4_2:32130792-32130811 | None:intergenic | 55.0% | |
| CCTATGCGTGTGAACGTTGG+AGG | - | chr4_2:32130789-32130808 | Msa0598090:intron | 55.0% | |
| GCGGGAGGATCCATACTTTC+TGG | - | chr4_2:32130928-32130947 | Msa0598090:CDS | 55.0% | |
| TGCCCTCACAACTTGTCTCG+TGG | - | chr4_2:32131077-32131096 | Msa0598090:CDS | 55.0% | |
| CCTCCACGAGACAAGTTGTG+AGG | + | chr4_2:32131083-32131102 | None:intergenic | 55.0% | |
| CCTCACAACTTGTCTCGTGG+AGG | - | chr4_2:32131080-32131099 | Msa0598090:CDS | 55.0% | |
| !! | TCATGGCGTTTTGGTGGGGA+TGG | + | chr4_2:32131191-32131210 | None:intergenic | 55.0% |
| GTGCCCTTCTCCACTTCTCA+TGG | + | chr4_2:32131208-32131227 | None:intergenic | 55.0% | |
| ATCGGACAACCTGAACACCC+TGG | - | chr4_2:32132117-32132136 | Msa0598090:intron | 55.0% | |
| CAACAGCACGAACACGTCCA+GGG | + | chr4_2:32132137-32132156 | None:intergenic | 55.0% | |
| AGTCCCCATGCCCATAGATG+AGG | - | chr4_2:32132581-32132600 | Msa0598090:intron | 55.0% | |
| CCTCCAACGTTCACACGCAT+AGG | + | chr4_2:32130792-32130811 | None:intergenic | 55.0% | |
| CCTATGCGTGTGAACGTTGG+AGG | - | chr4_2:32130789-32130808 | Msa0598090:intron | 55.0% | |
| GCGGGAGGATCCATACTTTC+TGG | - | chr4_2:32130928-32130947 | Msa0598090:CDS | 55.0% | |
| TGCCCTCACAACTTGTCTCG+TGG | - | chr4_2:32131077-32131096 | Msa0598090:CDS | 55.0% | |
| CCTCCACGAGACAAGTTGTG+AGG | + | chr4_2:32131083-32131102 | None:intergenic | 55.0% | |
| CCTCACAACTTGTCTCGTGG+AGG | - | chr4_2:32131080-32131099 | Msa0598090:CDS | 55.0% | |
| !! | TCATGGCGTTTTGGTGGGGA+TGG | + | chr4_2:32131191-32131210 | None:intergenic | 55.0% |
| GTGCCCTTCTCCACTTCTCA+TGG | + | chr4_2:32131208-32131227 | None:intergenic | 55.0% | |
| ATCGGACAACCTGAACACCC+TGG | - | chr4_2:32132117-32132136 | Msa0598090:intron | 55.0% | |
| CAACAGCACGAACACGTCCA+GGG | + | chr4_2:32132137-32132156 | None:intergenic | 55.0% | |
| AGTCCCCATGCCCATAGATG+AGG | - | chr4_2:32132581-32132600 | Msa0598090:intron | 55.0% | |
| !! | TGGCGTTTTGGTGGGGATGG+AGG | + | chr4_2:32131188-32131207 | None:intergenic | 60.0% |
| ! | CGAACACGTCCAGGGTGTTC+AGG | + | chr4_2:32132129-32132148 | None:intergenic | 60.0% |
| CCAACAGCACGAACACGTCC+AGG | + | chr4_2:32132138-32132157 | None:intergenic | 60.0% | |
| CCTGGACGTGTTCGTGCTGT+TGG | - | chr4_2:32132135-32132154 | Msa0598090:intron | 60.0% | |
| ! | GGACGTGTTCGTGCTGTTGG+TGG | - | chr4_2:32132138-32132157 | Msa0598090:intron | 60.0% |
| ! | CGTGTTCGTGCTGTTGGTGG+AGG | - | chr4_2:32132141-32132160 | Msa0598090:intron | 60.0% |
| ! | TCGTGCTGTTGGTGGAGGTG+TGG | - | chr4_2:32132146-32132165 | Msa0598090:intron | 60.0% |
| ! | CGTGCTGTTGGTGGAGGTGT+GGG | - | chr4_2:32132147-32132166 | Msa0598090:intron | 60.0% |
| !! | TGGCGTTTTGGTGGGGATGG+AGG | + | chr4_2:32131188-32131207 | None:intergenic | 60.0% |
| ! | CGAACACGTCCAGGGTGTTC+AGG | + | chr4_2:32132129-32132148 | None:intergenic | 60.0% |
| CCAACAGCACGAACACGTCC+AGG | + | chr4_2:32132138-32132157 | None:intergenic | 60.0% | |
| CCTGGACGTGTTCGTGCTGT+TGG | - | chr4_2:32132135-32132154 | Msa0598090:intron | 60.0% | |
| ! | GGACGTGTTCGTGCTGTTGG+TGG | - | chr4_2:32132138-32132157 | Msa0598090:intron | 60.0% |
| ! | CGTGTTCGTGCTGTTGGTGG+AGG | - | chr4_2:32132141-32132160 | Msa0598090:intron | 60.0% |
| ! | TCGTGCTGTTGGTGGAGGTG+TGG | - | chr4_2:32132146-32132165 | Msa0598090:intron | 60.0% |
| ! | CGTGCTGTTGGTGGAGGTGT+GGG | - | chr4_2:32132147-32132166 | Msa0598090:intron | 60.0% |
| TGCAGCGCCGCCTATACCAG+AGG | - | chr4_2:32132392-32132411 | Msa0598090:CDS | 65.0% | |
| TGCAGCGCCGCCTATACCAG+AGG | - | chr4_2:32132392-32132411 | Msa0598090:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 32130554 | 32132981 | 32130554 | ID=Msa0598090;Name=Msa0598090 |
| chr4_2 | mRNA | 32130554 | 32132981 | 32130554 | ID=Msa0598090-mRNA-1;Parent=Msa0598090;Name=Msa0598090-mRNA-1;_AED=0.09;_eAED=0.13;_QI=0|0|0|1|0.42|0.25|8|0|440 |
| chr4_2 | exon | 32132926 | 32132981 | 32132926 | ID=Msa0598090-mRNA-1:exon:7855;Parent=Msa0598090-mRNA-1 |
| chr4_2 | exon | 32132884 | 32132920 | 32132884 | ID=Msa0598090-mRNA-1:exon:7854;Parent=Msa0598090-mRNA-1 |
| chr4_2 | exon | 32132586 | 32132804 | 32132586 | ID=Msa0598090-mRNA-1:exon:7853;Parent=Msa0598090-mRNA-1 |
| chr4_2 | exon | 32132269 | 32132500 | 32132269 | ID=Msa0598090-mRNA-1:exon:7852;Parent=Msa0598090-mRNA-1 |
| chr4_2 | exon | 32131251 | 32131462 | 32131251 | ID=Msa0598090-mRNA-1:exon:7851;Parent=Msa0598090-mRNA-1 |
| chr4_2 | exon | 32131047 | 32131211 | 32131047 | ID=Msa0598090-mRNA-1:exon:7850;Parent=Msa0598090-mRNA-1 |
| chr4_2 | exon | 32130858 | 32131037 | 32130858 | ID=Msa0598090-mRNA-1:exon:7849;Parent=Msa0598090-mRNA-1 |
| chr4_2 | exon | 32130554 | 32130775 | 32130554 | ID=Msa0598090-mRNA-1:exon:7848;Parent=Msa0598090-mRNA-1 |
| chr4_2 | CDS | 32132926 | 32132981 | 32132926 | ID=Msa0598090-mRNA-1:cds;Parent=Msa0598090-mRNA-1 |
| chr4_2 | CDS | 32132884 | 32132920 | 32132884 | ID=Msa0598090-mRNA-1:cds;Parent=Msa0598090-mRNA-1 |
| chr4_2 | CDS | 32132586 | 32132804 | 32132586 | ID=Msa0598090-mRNA-1:cds;Parent=Msa0598090-mRNA-1 |
| chr4_2 | CDS | 32132269 | 32132500 | 32132269 | ID=Msa0598090-mRNA-1:cds;Parent=Msa0598090-mRNA-1 |
| chr4_2 | CDS | 32131251 | 32131462 | 32131251 | ID=Msa0598090-mRNA-1:cds;Parent=Msa0598090-mRNA-1 |
| chr4_2 | CDS | 32131047 | 32131211 | 32131047 | ID=Msa0598090-mRNA-1:cds;Parent=Msa0598090-mRNA-1 |
| chr4_2 | CDS | 32130858 | 32131037 | 32130858 | ID=Msa0598090-mRNA-1:cds;Parent=Msa0598090-mRNA-1 |
| chr4_2 | CDS | 32130554 | 32130775 | 32130554 | ID=Msa0598090-mRNA-1:cds;Parent=Msa0598090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
