AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0600540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0600540 MtrunA17_Chr4g0025571 96.750 923 28 2 1 923 1 921 0.0 1847
Msa0600540 MtrunA17_Chr2g0322001 60.684 936 296 20 1 921 1 879 0.0 1023
Msa0600540 MtrunA17_Chr1g0188861 54.795 219 91 2 694 907 545 760 8.29e-65 233
Msa0600540 MtrunA17_Chr7g0261061 56.771 192 79 2 709 896 466 657 3.11e-57 209
Msa0600540 MtrunA17_Chr7g0261061 34.225 187 104 5 5 184 5 179 9.85e-17 85.1
Msa0600540 MtrunA17_Chr1g0184231 40.549 328 167 6 576 896 353 659 2.09e-54 201
Msa0600540 MtrunA17_Chr1g0184231 30.556 216 113 7 1 209 1 186 1.28e-19 94.4
Msa0600540 MtrunA17_Chr7g0239641 35.644 303 171 7 588 887 385 666 4.77e-43 167
Msa0600540 MtrunA17_Chr7g0239641 30.688 189 105 5 5 180 6 181 6.12e-19 92.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0600540 AT2G27230.2 52.868 401 126 8 514 905 283 629 2.39e-114 365
Msa0600540 AT2G27230.2 53.689 244 86 5 1 240 1 221 6.14e-69 242
Msa0600540 AT2G27230.1 52.868 401 126 8 514 905 283 629 2.39e-114 365
Msa0600540 AT2G27230.1 53.689 244 86 5 1 240 1 221 6.14e-69 242
Msa0600540 AT1G64625.3 54.229 201 80 2 700 900 309 497 1.68e-61 218
Msa0600540 AT1G64625.2 54.229 201 80 2 700 900 323 511 2.43e-61 218
Msa0600540 AT1G64625.1 54.229 201 80 2 700 900 333 521 3.15e-61 218
Msa0600540 AT1G06150.1 55.026 189 83 1 713 899 543 731 8.96e-59 215
Msa0600540 AT1G06150.2 54.450 191 83 2 713 899 543 733 4.06e-57 210
Msa0600540 AT2G31280.1 53.439 189 79 2 713 899 535 716 7.45e-55 203
Msa0600540 AT2G31280.1 30.811 185 90 4 1 180 1 152 1.57e-18 91.3
Msa0600540 AT2G31280.3 49.515 206 78 2 713 899 535 733 4.77e-53 198
Msa0600540 AT2G31280.3 30.811 185 90 4 1 180 1 152 1.61e-18 91.3
Msa0600540 AT2G31280.2 48.223 197 71 2 713 885 507 696 1.41e-47 182
Msa0600540 AT1G64625.4 59.140 93 37 1 700 792 323 414 7.78e-27 115
Msa0600540 AT5G53900.2 26.383 235 120 10 5 212 21 229 4.67e-14 75.5
Msa0600540 AT3G15240.2 27.014 211 103 8 5 190 34 218 3.44e-12 69.7

Find 264 sgRNAs with CRISPR-Local

Find 490 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGATGATGGATTCATATT+AGG 0.130953 4_2:-42095654 None:intergenic
CAAATATCTGGTTTAGGTTT+TGG 0.145638 4_2:-42095407 None:intergenic
CCTGATATTGCTTCATTAAC+AGG 0.206849 4_2:-42096350 None:intergenic
TTCATCCCACTACTACAAAT+TGG 0.216782 4_2:-42095762 None:intergenic
TTTCCAAATCAAACCGTAAA+AGG 0.221964 4_2:+42096768 Msa0600540:CDS
TCTAACAATACTTCACTTCT+TGG 0.225735 4_2:+42095732 Msa0600540:CDS
GACTTTGCAGGCTGTTAATC+TGG 0.237499 4_2:+42094081 Msa0600540:intron
AACAAAACATGTTTCTTCTT+TGG 0.237529 4_2:+42092560 Msa0600540:five_prime_UTR
TTGAATCATTTGGCGATCTT+TGG 0.239359 4_2:-42096822 None:intergenic
CGATCTTTGGGACGAGGCCT+TGG 0.249035 4_2:-42096809 None:intergenic
GTACTATTCAATGAATTTCT+TGG 0.249303 4_2:-42095324 None:intergenic
CCAAGATAGCTTGAAGCTTT+AGG 0.264305 4_2:+42099049 Msa0600540:three_prime_UTR
TCTCAAACCACTTCCATATA+TGG 0.269006 4_2:+42096653 Msa0600540:CDS
TTGATGATGGATTCATATTA+GGG 0.275734 4_2:-42095653 None:intergenic
CAAGAAAAGCATATGTTTGA+TGG 0.277270 4_2:-42097029 None:intergenic
GTATAGATATTGTAGGGTTT+TGG 0.278631 4_2:+42099145 Msa0600540:three_prime_UTR
CCTGCATTCCAGCTGAAAAT+TGG 0.285378 4_2:-42094838 None:intergenic
TTTCTTTCCTGTAATTTGAT+TGG 0.291344 4_2:+42099099 Msa0600540:three_prime_UTR
GCCGACTTAATCAGAGGATT+AGG 0.307196 4_2:+42097957 Msa0600540:CDS
TGTTAGATAATGGAGAATAT+TGG 0.309320 4_2:+42095108 Msa0600540:intron
CTACTTTGATTCCATTGGTT+TGG 0.316881 4_2:+42092623 Msa0600540:five_prime_UTR
AAAATCAGTAGTGGATAATT+CGG 0.318447 4_2:-42095835 None:intergenic
AAGGATAGATGATTTACTTC+AGG 0.319246 4_2:+42096001 Msa0600540:CDS
TTTGATTTGGAAACTTCTTC+TGG 0.319876 4_2:-42096758 None:intergenic
GGCAAAGGCTATCAAATATC+TGG 0.320742 4_2:-42095419 None:intergenic
TCAACTTGGTTCTTTCTTGC+CGG 0.324554 4_2:+42094990 Msa0600540:CDS
TACATTGTTTGCAGATGAAT+TGG 0.326669 4_2:+42096253 Msa0600540:CDS
TGATGATGCTTTAAATCAAC+TGG 0.329683 4_2:-42095954 None:intergenic
CCCCATGGGGTTGTTCAACT+TGG 0.332845 4_2:+42094976 Msa0600540:CDS
CAACAAGTCTTCTCGGGTAT+TGG 0.333113 4_2:+42095612 Msa0600540:CDS
ATCTAGTCTTATTAGACTTC+AGG 0.333736 4_2:+42098958 Msa0600540:three_prime_UTR
CATGTCACTAGTTCGACTTT+TGG 0.338043 4_2:+42098795 Msa0600540:CDS
CCTAAAGCTTCAAGCTATCT+TGG 0.338474 4_2:-42099049 None:intergenic
TTTCAATTGGGACATGTTCC+TGG 0.339137 4_2:+42095159 Msa0600540:CDS
GTATTCTCTCGTTGAGCCTT+TGG 0.341327 4_2:-42095444 None:intergenic
TGATGACTTGTTTGATGTCT+TGG 0.341490 4_2:+42096190 Msa0600540:CDS
TGTCGTGGTAGTTAGTTTCT+AGG 0.341520 4_2:+42092526 Msa0600540:five_prime_UTR
GAAGAACTTAATCTTTCAAT+TGG 0.344361 4_2:+42095146 Msa0600540:CDS
TTAAGATCCTCAACAATGAT+AGG 0.347902 4_2:-42097771 None:intergenic
TGAAACTGCTGAATGGAAAC+TGG 0.349119 4_2:+42096228 Msa0600540:CDS
GGCTATCAAATATCTGGTTT+AGG 0.351014 4_2:-42095413 None:intergenic
ACTAAGTTGAGAACCATATA+TGG 0.352528 4_2:-42096666 None:intergenic
CGAGGCCTTGGGTTCTCTCC+AGG 0.360591 4_2:-42096797 None:intergenic
AGGTGATCAGTGTTTGTTCC+TGG 0.365226 4_2:-42096386 None:intergenic
TGAATCATTTGGCGATCTTT+GGG 0.365895 4_2:-42096821 None:intergenic
GTTAGATCCATTAGCTACTA+AGG 0.365982 4_2:-42095298 None:intergenic
TCACGCGATCTTGAATCATT+TGG 0.367296 4_2:-42096832 None:intergenic
AGTGAGGGTTGTTGAGAAAA+GGG 0.369503 4_2:-42092033 None:intergenic
CCGACTTAATCAGAGGATTA+GGG 0.369714 4_2:+42097958 Msa0600540:CDS
CAACACACCAATCAAATTAC+AGG 0.373634 4_2:-42099106 None:intergenic
ATGGTTCTCAACTTAGTTCA+TGG 0.375053 4_2:+42096672 Msa0600540:CDS
AACAAGTCTTCTCGGGTATT+GGG 0.378388 4_2:+42095613 Msa0600540:CDS
ACAGATGCTTTGTGAGGAAC+GGG 0.380475 4_2:+42097917 Msa0600540:intron
CATTTCATCAGAATTCTGAT+TGG 0.380795 4_2:-42096444 None:intergenic
AGGCAATCACGAAGAAAATC+AGG 0.383259 4_2:-42096086 None:intergenic
GATTCCAATCTGAATGGTTT+CGG 0.384125 4_2:+42095573 Msa0600540:CDS
GATCTTTGGGACGAGGCCTT+GGG 0.384972 4_2:-42096808 None:intergenic
AAGCTCGCAATGACAAGATC+TGG 0.388708 4_2:+42098006 Msa0600540:CDS
GATGTGAAACTGAAAATAAA+TGG 0.392583 4_2:-42092061 None:intergenic
TCATCCCACTACTACAAATT+GGG 0.398306 4_2:-42095761 None:intergenic
AAAGCATCATCAAGATGCTT+TGG 0.400215 4_2:+42095965 Msa0600540:CDS
TGCGCTCCCTTAGTAGCTAA+TGG 0.406239 4_2:+42095291 Msa0600540:CDS
TTTACCGGAGGATGGAATTC+CGG 0.407578 4_2:+42092419 Msa0600540:five_prime_UTR
GAGTGAGGGTTGTTGAGAAA+AGG 0.408682 4_2:-42092034 None:intergenic
TTTATTTCTCCTCTTAGAAC+AGG 0.415784 4_2:-42095351 None:intergenic
GAATGCTACTTTGATTCCAT+TGG 0.416360 4_2:+42092618 Msa0600540:five_prime_UTR
CGTGAAAATAGTGTTTCAAC+TGG 0.418572 4_2:+42096722 Msa0600540:CDS
TCGAGACCACAGCATCTAAC+AGG 0.418656 4_2:-42096406 None:intergenic
CTGTAATTTGATTGGTGTGT+TGG 0.419958 4_2:+42099107 Msa0600540:three_prime_UTR
CAGAACTAAGAATGAACAAA+AGG 0.421108 4_2:-42092596 None:intergenic
GCCAATCACATGCATCTAGA+AGG 0.421112 4_2:+42095912 Msa0600540:CDS
TTATTCCTGTGCTTCCCCAT+GGG 0.425095 4_2:+42094962 Msa0600540:CDS
ATCTTGTACGCAACTTTCAT+CGG 0.426529 4_2:+42096163 Msa0600540:CDS
TTCAAAATGAAACTGCTGAA+TGG 0.429885 4_2:+42096221 Msa0600540:CDS
GCTGATAAGCTGAAACAGAC+TGG 0.431363 4_2:+42097070 Msa0600540:CDS
GTTATTCCTGTGCTTCCCCA+TGG 0.432971 4_2:+42094961 Msa0600540:CDS
AGCCACTGAGTCTGAGACAT+TGG 0.433015 4_2:-42091982 None:intergenic
CTCTTTGTGCTAGGAATCAA+TGG 0.434131 4_2:+42092702 Msa0600540:CDS
CCTGTTAATGAAGCAATATC+AGG 0.434431 4_2:+42096350 Msa0600540:CDS
CATGAAGAATCAAGACTTGC+AGG 0.438558 4_2:-42095495 None:intergenic
TGGTTTCGGTCTTAAACAAA+TGG 0.438687 4_2:+42095587 Msa0600540:CDS
TGAGGTTGGCTCACAATCAA+TGG 0.439147 4_2:+42097743 Msa0600540:CDS
CAAGAAAACTAGGTGGGTTG+TGG 0.443971 4_2:-42098889 None:intergenic
TAAACCATCATGTTATCAAC+TGG 0.446367 4_2:-42098856 None:intergenic
AATAATTCTGTCAATGTTGC+TGG 0.446556 4_2:+42094269 Msa0600540:CDS
AAGACCGAAACCATTCAGAT+TGG 0.448725 4_2:-42095577 None:intergenic
AAGAACTTAATCTTTCAATT+GGG 0.451227 4_2:+42095147 Msa0600540:CDS
CTTGTTTGATGTCTTGGGCA+TGG 0.452227 4_2:+42096196 Msa0600540:CDS
TTGCTGTTATGTAGGATACT+TGG 0.455465 4_2:+42094398 Msa0600540:intron
AAGCCTTGTTGAATAGTCTT+CGG 0.456401 4_2:-42095193 None:intergenic
AATGGAGCAACAAGTCTTCT+CGG 0.456535 4_2:+42095605 Msa0600540:CDS
GTGCAGATTGTTAGTAAAGA+AGG 0.456740 4_2:+42097672 Msa0600540:intron
TCTGTCAATGTTGCTGGTCA+AGG 0.459032 4_2:+42094275 Msa0600540:CDS
TTACGTGAAATTGTGCCTAA+TGG 0.460598 4_2:+42096860 Msa0600540:CDS
CTAACTGATTCCAATCTGAA+TGG 0.460629 4_2:+42095567 Msa0600540:CDS
GATGACTTGTTTGATGTCTT+GGG 0.462846 4_2:+42096191 Msa0600540:CDS
ATTGGGAGAAGAGAAGAGAA+TGG 0.464368 4_2:-42091964 None:intergenic
AAATCAGTAGTGGATAATTC+GGG 0.467081 4_2:-42095834 None:intergenic
GAGACGGTGATGGAATCTTC+AGG 0.469515 4_2:-42096025 None:intergenic
CTAATAGAACTTGTTTCCGC+AGG 0.472730 4_2:-42096596 None:intergenic
ACTTCGAGGGAGGGGCTACA+TGG 0.472832 4_2:+42097715 Msa0600540:CDS
AGGGGCTACATGGGCATATG+AGG 0.472884 4_2:+42097725 Msa0600540:CDS
GCCTTCTAGATGCATGTGAT+TGG 0.473846 4_2:-42095913 None:intergenic
ATATTATCGTGACCTACTAC+TGG 0.475987 4_2:-42096323 None:intergenic
CTTTGAAGACTCTTTGTGCT+AGG 0.476288 4_2:+42092693 Msa0600540:CDS
AAAATAAATGGAAGTGAGTG+AGG 0.477766 4_2:-42092049 None:intergenic
GAAACAAGTTCTATTAGATC+TGG 0.479035 4_2:+42096602 Msa0600540:CDS
ACACTATCCCACGAGATTCA+AGG 0.479760 4_2:-42092296 None:intergenic
CGAGATTCAAGGTTGTTAAG+AGG 0.479777 4_2:-42092285 None:intergenic
AACAATACTTCACTTCTTGG+AGG 0.481486 4_2:+42095735 Msa0600540:CDS
TTCAGATGTATAGATATTGT+AGG 0.482591 4_2:+42099138 Msa0600540:three_prime_UTR
AGGATAGATGATTTACTTCA+GGG 0.486493 4_2:+42096002 Msa0600540:CDS
TATTCAATGAATTTCTTGGT+TGG 0.488218 4_2:-42095320 None:intergenic
AAAAGATAACTTCGAGGGAG+GGG 0.489680 4_2:+42097707 Msa0600540:CDS
CATTCCAGACCAAGAAAACT+AGG 0.490562 4_2:-42098899 None:intergenic
TTTGTCGGATTGTGAAGCTT+TGG 0.490893 4_2:-42091940 None:intergenic
GTGGTCTCGAAGACTCAATC+TGG 0.491227 4_2:+42096419 Msa0600540:CDS
TCAGATGTATAGATATTGTA+GGG 0.493091 4_2:+42099139 Msa0600540:three_prime_UTR
ACCAGCACCCTTCTCTGTCT+TGG 0.493894 4_2:-42094175 None:intergenic
GTATATACCTTTGCTCCATT+AGG 0.494185 4_2:-42096875 None:intergenic
GGTGATCAGTGTTTGTTCCT+GGG 0.495320 4_2:-42096385 None:intergenic
CACAGATGCTTTGTGAGGAA+CGG 0.495392 4_2:+42097916 Msa0600540:intron
GCCACTGAGTCTGAGACATT+GGG 0.496635 4_2:-42091981 None:intergenic
TGCACCGGAATTCCATCCTC+CGG 0.496679 4_2:-42092423 None:intergenic
TACTAAGGGAGCGCAGTTTG+AGG 0.497986 4_2:-42095283 None:intergenic
TAGGGTTAACCATCTTGAAA+GGG 0.499756 4_2:+42097976 Msa0600540:CDS
ACTAGATTTGATGTCAATCA+TGG 0.503050 4_2:-42098942 None:intergenic
AGGGTTGTTGAGAAAAGGGA+AGG 0.503727 4_2:-42092029 None:intergenic
CTTGGACGTGCTGCATTCAC+AGG 0.503760 4_2:+42094416 Msa0600540:CDS
ATAGTTACCACAGTTCTGTA+TGG 0.503951 4_2:+42095373 Msa0600540:CDS
TTCCATGACCCCTTTCAAGA+TGG 0.505484 4_2:-42097985 None:intergenic
TTGAATCCTTAGCTGAGAAT+CGG 0.508972 4_2:-42094204 None:intergenic
TCTTGTACGCAACTTTCATC+GGG 0.509856 4_2:+42096164 Msa0600540:CDS
TCTCTCTCTTTACCGGAGGA+TGG 0.510122 4_2:+42092411 Msa0600540:five_prime_UTR
CATTCACAGGAAATCATCAA+TGG 0.510382 4_2:+42094429 Msa0600540:CDS
AACAGAATCAGTCACAGATC+CGG 0.511871 4_2:-42095232 None:intergenic
ACCAAGACAGAGAAGGGTGC+TGG 0.512484 4_2:+42094174 Msa0600540:CDS
CACCCTTCTCTGTCTTGGTA+AGG 0.514487 4_2:-42094170 None:intergenic
TTTCTTCCGATTCTCAGCTA+AGG 0.517018 4_2:+42094198 Msa0600540:CDS
ATATTAAAGACACTTGATGA+TGG 0.518313 4_2:-42095666 None:intergenic
TTAGGGTTAACCATCTTGAA+AGG 0.518572 4_2:+42097975 Msa0600540:CDS
TGGTTCTCAACTTAGTTCAT+GGG 0.519370 4_2:+42096673 Msa0600540:CDS
CTTCGAGGGAGGGGCTACAT+GGG 0.519484 4_2:+42097716 Msa0600540:CDS
AAGAAAACTAGGTGGGTTGT+GGG 0.524311 4_2:-42098888 None:intergenic
CGCATAATCTGCATGCTGGT+AGG 0.527151 4_2:-42096515 None:intergenic
GGAATCCCAATTTGTAGTAG+TGG 0.529036 4_2:+42095756 Msa0600540:CDS
CTGATAAGCTGAAACAGACT+GGG 0.529953 4_2:+42097071 Msa0600540:CDS
GTTGAGCCTTTGGTTGGCAA+AGG 0.531536 4_2:-42095434 None:intergenic
ACTTTGCAGGCTGTTAATCT+GGG 0.532556 4_2:+42094082 Msa0600540:intron
TTGAGAACCATATATGGAAG+TGG 0.535342 4_2:-42096660 None:intergenic
CTATTGTCAGTTTCTTGCAC+CGG 0.536270 4_2:-42092438 None:intergenic
TCTTCGGATAGAAGCGCACC+AGG 0.536648 4_2:-42095177 None:intergenic
TCTCTCGTTGAGCCTTTGGT+TGG 0.539797 4_2:-42095440 None:intergenic
TGCTCCAGTTGATAACATGA+TGG 0.541570 4_2:+42098852 Msa0600540:CDS
TGCCTTACCAAGACAGAGAA+GGG 0.542187 4_2:+42094168 Msa0600540:CDS
GGTTTGCCCTATCATTGTTG+AGG 0.542213 4_2:+42097764 Msa0600540:CDS
CTCATTGATTAACAAAATGA+TGG 0.542701 4_2:+42094244 Msa0600540:CDS
AGAATAATTGCGTAGGCTGA+TGG 0.542907 4_2:-42099191 None:intergenic
TTGATTCTTCATGTCTGCAA+CGG 0.545186 4_2:+42095505 Msa0600540:CDS
CAGATTGTTAGTAAAGAAGG+TGG 0.545599 4_2:+42097675 Msa0600540:intron
GCATAGACGCTCTTCTTGAA+AGG 0.547839 4_2:+42097005 Msa0600540:CDS
TCAAGATGCTTTGGCTACCT+CGG 0.548663 4_2:+42095974 Msa0600540:CDS
TGATAGCCTTTGCCAACCAA+AGG 0.548931 4_2:+42095428 Msa0600540:CDS
ATGGAGCAACAAGTCTTCTC+GGG 0.549681 4_2:+42095606 Msa0600540:CDS
AGTACAATGCCTGTTCTAAG+AGG 0.551317 4_2:+42095342 Msa0600540:CDS
AACCATCTTGAAAGGGGTCA+TGG 0.552243 4_2:+42097983 Msa0600540:CDS
AGCTCGCAATGACAAGATCT+GGG 0.552792 4_2:+42098007 Msa0600540:CDS
GGCTGCAGCAAAGATAATGT+TGG 0.552915 4_2:+42096623 Msa0600540:CDS
GCTACATGGGCATATGAGGT+TGG 0.554220 4_2:+42097729 Msa0600540:CDS
ATCTGCATGCTGGTAGGAGA+AGG 0.557570 4_2:-42096509 None:intergenic
ATTTGGCGATCTTTGGGACG+AGG 0.558705 4_2:-42096815 None:intergenic
TAAGATCCTCAACAATGATA+GGG 0.559960 4_2:-42097770 None:intergenic
TCAAAACTCCATACCTCTGG+TGG 0.560025 4_2:-42094485 None:intergenic
GTTGTTAAAAGATAACTTCG+AGG 0.563438 4_2:+42097701 Msa0600540:CDS
TACCTCGACTAGCATCTGAC+GGG 0.563664 4_2:-42097799 None:intergenic
AGAACTAAGAATGAACAAAA+GGG 0.566204 4_2:-42092595 None:intergenic
TTAGATCCATTAGCTACTAA+GGG 0.566817 4_2:-42095297 None:intergenic
CTTTGGCTACCTCGGATCAA+AGG 0.566920 4_2:+42095982 Msa0600540:CDS
ACCAAGTTGAACAACCCCAT+GGG 0.567776 4_2:-42094977 None:intergenic
TCACAATAAAGAGACGGTGA+TGG 0.568152 4_2:-42096035 None:intergenic
GAAACAGACTGGGGAATCCA+AGG 0.568580 4_2:+42097081 Msa0600540:CDS
ATCGCGCATAATCTGCATGC+TGG 0.570033 4_2:-42096519 None:intergenic
TTGCCTTACCAAGACAGAGA+AGG 0.572719 4_2:+42094167 Msa0600540:CDS
TAAAAGATAACTTCGAGGGA+GGG 0.573299 4_2:+42097706 Msa0600540:CDS
GTACCTTTAGGTATTAAATG+AGG 0.575790 4_2:+42094808 Msa0600540:intron
ATCACCGTCTCTTTATTGTG+AGG 0.576343 4_2:+42096037 Msa0600540:CDS
CTGTCAATGTTGCTGGTCAA+GGG 0.576788 4_2:+42094276 Msa0600540:CDS
TTGTTAAAAGATAACTTCGA+GGG 0.576867 4_2:+42097702 Msa0600540:CDS
AGGACAAAACAAGCAGGGAG+AGG 0.579788 4_2:+42092499 Msa0600540:five_prime_UTR
GGTTTGAGGACAAAACAAGC+AGG 0.580822 4_2:+42092493 Msa0600540:five_prime_UTR
TGAAGCTTTGGTGTGGTCAG+TGG 0.580899 4_2:-42091928 None:intergenic
TGATCACCTGTTAGATGCTG+TGG 0.584253 4_2:+42096400 Msa0600540:CDS
CTATCTTGGCAAAGTACAGA+AGG 0.584408 4_2:-42099035 None:intergenic
CTTAACAACCTTGAATCTCG+TGG 0.584423 4_2:+42092288 Msa0600540:five_prime_UTR
ACAACCCCATGGGGAAGCAC+AGG 0.584531 4_2:-42094967 None:intergenic
TTCTCAACTTAGTTCATGGG+TGG 0.587945 4_2:+42096676 Msa0600540:CDS
CCCTAATCCTCTGATTAAGT+CGG 0.588706 4_2:-42097958 None:intergenic
ATTCTGATGAAATGTCATGT+AGG 0.591662 4_2:+42096453 Msa0600540:CDS
TTATAAATATTAGCTTTGTG+TGG 0.592248 4_2:+42099276 Msa0600540:three_prime_UTR
AACCGTAAAAGGCTTAAACC+TGG 0.592604 4_2:+42096779 Msa0600540:CDS
CATGTAGGACCACGGTGACA+AGG 0.593570 4_2:+42096468 Msa0600540:CDS
GCTTTCCTTCCACAAAACGT+TGG 0.598976 4_2:+42094134 Msa0600540:CDS
AAATAGGGATGTAACAAGGA+TGG 0.599726 4_2:+42098765 Msa0600540:CDS
GTACCTCGACTAGCATCTGA+CGG 0.600309 4_2:-42097800 None:intergenic
AATGAAGCAATATCAGGCAA+TGG 0.600955 4_2:+42096356 Msa0600540:CDS
AGCTTTGGTGTGGTCAGTGG+TGG 0.601953 4_2:-42091925 None:intergenic
GAATCCCAATTTGTAGTAGT+GGG 0.602477 4_2:+42095757 Msa0600540:CDS
AATTGTGCCTAATGGAGCAA+AGG 0.604460 4_2:+42096868 Msa0600540:CDS
TAATAGAACTTGTTTCCGCA+GGG 0.607242 4_2:-42096595 None:intergenic
TTAACAACCTTGAATCTCGT+GGG 0.609344 4_2:+42092289 Msa0600540:five_prime_UTR
GGTTAGTGACATCTTTATCG+AGG 0.609951 4_2:-42096106 None:intergenic
CGGATTGTGAAGCTTTGGTG+TGG 0.610389 4_2:-42091935 None:intergenic
TCCCAATGTCTCAGACTCAG+TGG 0.610926 4_2:+42091980 Msa0600540:five_prime_UTR
CTTAGTTCATGGGTGGAGAG+TGG 0.612430 4_2:+42096683 Msa0600540:CDS
ATCATCTATCCTTTGATCCG+AGG 0.615208 4_2:-42095991 None:intergenic
TTGTTTGCAGATGAATTGGA+TGG 0.615210 4_2:+42096257 Msa0600540:CDS
ACGAGAGAATACAATTGTGA+AGG 0.615233 4_2:+42095455 Msa0600540:CDS
TTAAAAGATAACTTCGAGGG+AGG 0.616882 4_2:+42097705 Msa0600540:CDS
GGGTTGTTGAGAAAAGGGAA+GGG 0.618321 4_2:-42092028 None:intergenic
TATTCCTGTGCTTCCCCATG+GGG 0.618640 4_2:+42094963 Msa0600540:CDS
AACCAAGTTGAACAACCCCA+TGG 0.621270 4_2:-42094978 None:intergenic
AGGGTTAACCATCTTGAAAG+GGG 0.622173 4_2:+42097977 Msa0600540:CDS
CAGATGCTTTGTGAGGAACG+GGG 0.623790 4_2:+42097918 Msa0600540:intron
ATGCGCGATAATGTTAGCGA+GGG 0.624545 4_2:+42096533 Msa0600540:CDS
GAAATAGCCGACTTAATCAG+AGG 0.625312 4_2:+42097951 Msa0600540:CDS
ATTCTCACAGATGCTTTGTG+AGG 0.626614 4_2:+42097911 Msa0600540:intron
GGAAGGAAAGCTGATGGCAA+AGG 0.627169 4_2:-42094122 None:intergenic
CAGTTTGAGGTAATGACATG+CGG 0.629784 4_2:-42095270 None:intergenic
TCAGTAGTGGATAATTCGGG+AGG 0.632153 4_2:-42095831 None:intergenic
GGCAATCACGAAGAAAATCA+GGG 0.632385 4_2:-42096085 None:intergenic
TTAAACCTGGAGAGAACCCA+AGG 0.635271 4_2:+42096792 Msa0600540:CDS
TTCTCAGCTAAGGATTCAAG+AGG 0.639698 4_2:+42094208 Msa0600540:CDS
ATGTCTCAACCGAAAACCGA+TGG 0.641987 4_2:+42095687 Msa0600540:CDS
TGCTCCTCACAATAAAGAGA+CGG 0.642685 4_2:-42096041 None:intergenic
GGTATTGGGAGGCAAAGTCA+TGG 0.645909 4_2:+42095627 Msa0600540:CDS
TCTCAACCGAAAACCGATGG+TGG 0.647012 4_2:+42095690 Msa0600540:CDS
CAGTAGTGGATAATTCGGGA+GGG 0.647083 4_2:-42095830 None:intergenic
TTGGAGCAAACAGCAAAGGG+AGG 0.648602 4_2:+42098814 Msa0600540:CDS
AAGTCTTCTCGGGTATTGGG+AGG 0.650143 4_2:+42095616 Msa0600540:CDS
TATGCGCGATAATGTTAGCG+AGG 0.651073 4_2:+42096532 Msa0600540:CDS
GCAGGGAGAGGATCGTGTCG+TGG 0.658900 4_2:+42092511 Msa0600540:five_prime_UTR
TCCCCGTCAGATGCTAGTCG+AGG 0.659873 4_2:+42097797 Msa0600540:CDS
CCAGACCAAGAAAACTAGGT+GGG 0.659995 4_2:-42098895 None:intergenic
GACATGCGGATTAGAAGACA+CGG 0.663163 4_2:-42095256 None:intergenic
GAGATGCTCTTCACTAACTG+CGG 0.664064 4_2:-42099000 None:intergenic
AGGCAAATAGGGATGTAACA+AGG 0.667164 4_2:+42098761 Msa0600540:intron
GTTTGAGGACAAAACAAGCA+GGG 0.671345 4_2:+42092494 Msa0600540:five_prime_UTR
CAGAAAACACGATAACAACA+AGG 0.678508 4_2:-42099338 None:intergenic
TGCGCGATAATGTTAGCGAG+GGG 0.687357 4_2:+42096534 Msa0600540:CDS
CAAAGACGTATATCCACCAG+AGG 0.692364 4_2:+42094472 Msa0600540:CDS
TCCAGACCAAGAAAACTAGG+TGG 0.701798 4_2:-42098896 None:intergenic
CCAAGTTGAACAACCCCATG+GGG 0.703250 4_2:-42094976 None:intergenic
CTTTCAAGTGAAAGACACAC+CGG 0.703538 4_2:+42095213 Msa0600540:CDS
TGTACTAATCCTTGTCACCG+TGG 0.707961 4_2:-42096477 None:intergenic
ACCTCGACTAGCATCTGACG+GGG 0.708133 4_2:-42097798 None:intergenic
TATCCGAAGACTATTCAACA+AGG 0.708743 4_2:+42095190 Msa0600540:CDS
AAATAAATGGAAGTGAGTGA+GGG 0.715552 4_2:-42092048 None:intergenic
GAGGCGTCCATACAGAACTG+TGG 0.721040 4_2:-42095380 None:intergenic
GCGCGATAATGTTAGCGAGG+GGG 0.728526 4_2:+42096535 Msa0600540:CDS
ACATGCGGATTAGAAGACAC+GGG 0.729390 4_2:-42095255 None:intergenic
TTTCAACTGGATACTCTAAG+CGG 0.739997 4_2:+42096735 Msa0600540:CDS
TGATAAGCTGAAACAGACTG+GGG 0.763764 4_2:+42097072 Msa0600540:CDS
GGAGGTCAAAACAAGCCCTG+CGG 0.765540 4_2:+42096580 Msa0600540:CDS
TGAAATGTCATGTAGGACCA+CGG 0.773497 4_2:+42096460 Msa0600540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTTTAATTAAAACAAAAAA+AGG - chr4_2:42093224-42093243 None:intergenic 10.0%
!!! TACTATTATTTTAAAATTTC+TGG - chr4_2:42093604-42093623 None:intergenic 10.0%
!! TGTATAAAATATATTATTAG+AGG - chr4_2:42098193-42098212 None:intergenic 10.0%
!!! TGAAAATTTGAGATTAAAAA+TGG + chr4_2:42092652-42092671 Msa0600540:exon 15.0%
!!! GAAAATTTGAGATTAAAAAT+GGG + chr4_2:42092653-42092672 Msa0600540:exon 15.0%
!!! AAAATTTGAGATTAAAAATG+GGG + chr4_2:42092654-42092673 Msa0600540:exon 15.0%
!! AAAAAAAAGTAGATTTGATT+AGG + chr4_2:42092833-42092852 Msa0600540:intron 15.0%
!! AAAAAAAGTAGATTTGATTA+GGG + chr4_2:42092834-42092853 Msa0600540:intron 15.0%
!!! TTAAATTTTGAGAAATTTAG+TGG + chr4_2:42092947-42092966 Msa0600540:intron 15.0%
!!! TAAATTTTGAGAAATTTAGT+GGG + chr4_2:42092948-42092967 Msa0600540:intron 15.0%
!!! CTTTGTTTTAAAGATTTATT+GGG + chr4_2:42092981-42093000 Msa0600540:intron 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG + chr4_2:42094710-42094729 Msa0600540:intron 15.0%
!! TAATAATTCTTGTTAGATAA+TGG + chr4_2:42095098-42095117 Msa0600540:intron 15.0%
!! TATAAAGAATGTAGATATAT+AGG - chr4_2:42097207-42097226 None:intergenic 15.0%
!!! TAATAAAAAATACCAACTTT+TGG + chr4_2:42097227-42097246 Msa0600540:intron 15.0%
!! AGAAAATTCAATTATTTGAT+TGG - chr4_2:42097269-42097288 None:intergenic 15.0%
!! TAGTTAAAAAAAAGGTAAAT+TGG - chr4_2:42097341-42097360 None:intergenic 15.0%
!! CAGATAAAATATATAATTAG+AGG - chr4_2:42097864-42097883 None:intergenic 15.0%
!!! ATTTTTTGCTGAATTTAAAA+TGG - chr4_2:42098679-42098698 None:intergenic 15.0%
!!! TTTTGAAGGAATATTACAAA+GGG - chr4_2:42092008-42092027 None:intergenic 20.0%
!! AAAAATGGATAAACACAAAA+GGG - chr4_2:42092210-42092229 None:intergenic 20.0%
!! AAAAAATGGATAAACACAAA+AGG - chr4_2:42092211-42092230 None:intergenic 20.0%
!!! AAAAAGGGTATATCAAAAAA+TGG - chr4_2:42092225-42092244 None:intergenic 20.0%
!! AAAAATGGTTAACAGAAAAA+GGG - chr4_2:42092240-42092259 None:intergenic 20.0%
!! AAAAAATGGTTAACAGAAAA+AGG - chr4_2:42092241-42092260 None:intergenic 20.0%
!!! ACCATTTTTTTCATCTAAAA+TGG + chr4_2:42092251-42092270 Msa0600540:five_prime_UTR 20.0%
!!! TCCATTTTAGATGAAAAAAA+TGG - chr4_2:42092255-42092274 None:intergenic 20.0%
!!! ATTTTGAGAAATTAATTCAG+TGG + chr4_2:42092809-42092828 Msa0600540:intron 20.0%
!!! TTTTGAGAAATTAATTCAGT+GGG + chr4_2:42092810-42092829 Msa0600540:intron 20.0%
!!! GCTTTGTTTTAAAGATTTAT+TGG + chr4_2:42092980-42092999 Msa0600540:intron 20.0%
!!! TTTTAAAGATTTATTGGGTT+TGG + chr4_2:42092986-42093005 Msa0600540:intron 20.0%
!! CTTTATGTTCTTATTGTTAT+TGG + chr4_2:42093748-42093767 Msa0600540:intron 20.0%
!! TAGTTAACTCAAATACAAAT+AGG - chr4_2:42094052-42094071 None:intergenic 20.0%
!!! AAAGCATTTAAACAAAATAG+AGG - chr4_2:42094581-42094600 None:intergenic 20.0%
!! CAAGAATTATTAGAGAAATT+TGG - chr4_2:42095090-42095109 None:intergenic 20.0%
!! AAGAACTTAATCTTTCAATT+GGG + chr4_2:42095147-42095166 Msa0600540:CDS 20.0%
!!! ATAATAAATTTTACCACCAT+CGG - chr4_2:42095706-42095725 None:intergenic 20.0%
!!! GGATGAATAATAATCTTTTA+AGG + chr4_2:42095778-42095797 Msa0600540:CDS 20.0%
!!! ATGAAAACAAATTTTGAACA+CGG + chr4_2:42096137-42096156 Msa0600540:CDS 20.0%
!! ATTTATTACATATCACATTG+TGG + chr4_2:42096930-42096949 Msa0600540:intron 20.0%
!!! TCATTTTCATTGGTATTTAT+TGG + chr4_2:42097173-42097192 Msa0600540:intron 20.0%
!! AAAAATAATACACCAAAAGT+TGG - chr4_2:42097242-42097261 None:intergenic 20.0%
!!! AACCGTTTTTATAATGTATT+TGG + chr4_2:42097504-42097523 Msa0600540:intron 20.0%
!! GTCCAAATACATTATAAAAA+CGG - chr4_2:42097509-42097528 None:intergenic 20.0%
!!! TTGCTTAGTTATTTTGATTT+TGG + chr4_2:42098230-42098249 Msa0600540:intron 20.0%
!!! TTAGTTATTTTGATTTTGGA+GGG + chr4_2:42098234-42098253 Msa0600540:intron 20.0%
!!! TTGGAGTTTTAACAAAATTA+CGG - chr4_2:42098491-42098510 None:intergenic 20.0%
!!! GATTCACTTTTTATTTTTTC+AGG + chr4_2:42098741-42098760 Msa0600540:intron 20.0%
!!! TTTTATTTTTTCAGGCAAAT+AGG + chr4_2:42098749-42098768 Msa0600540:intron 20.0%
!!! TTTATTTTTTCAGGCAAATA+GGG + chr4_2:42098750-42098769 Msa0600540:intron 20.0%
!!! TTATAAATATTAGCTTTGTG+TGG + chr4_2:42099276-42099295 Msa0600540:three_prime_UTR 20.0%
!!! GTTTTGAAGGAATATTACAA+AGG - chr4_2:42092009-42092028 None:intergenic 25.0%
! GATGTGAAACTGAAAATAAA+TGG - chr4_2:42092064-42092083 None:intergenic 25.0%
! AACAAAACATGTTTCTTCTT+TGG + chr4_2:42092560-42092579 Msa0600540:five_prime_UTR 25.0%
! AGAACTAAGAATGAACAAAA+GGG - chr4_2:42092598-42092617 None:intergenic 25.0%
!!! AAAGTAAGTAGTTTTGTTGA+AGG + chr4_2:42092763-42092782 Msa0600540:intron 25.0%
!!! AAGTGATTATTGTTTTGCTT+TGG + chr4_2:42092786-42092805 Msa0600540:intron 25.0%
!! GGAAGTAAATTTTTGCTTAA+TGG + chr4_2:42092855-42092874 Msa0600540:intron 25.0%
!!! TTAATGGTGTTCTTTGATTT+TGG + chr4_2:42092871-42092890 Msa0600540:intron 25.0%
!!! TTGGATTTTGAGAAATTTAG+TGG + chr4_2:42092890-42092909 Msa0600540:intron 25.0%
!!! AGATTTAGATTCTATTTCTG+TGG + chr4_2:42093097-42093116 Msa0600540:intron 25.0%
!! TTCTTATTGTTATTGGTGTA+TGG + chr4_2:42093755-42093774 Msa0600540:intron 25.0%
!! TCTTATTGTTATTGGTGTAT+GGG + chr4_2:42093756-42093775 Msa0600540:intron 25.0%
! TTATAGCTTATGTATGAGAA+TGG + chr4_2:42093913-42093932 Msa0600540:intron 25.0%
!! CTCATTGATTAACAAAATGA+TGG + chr4_2:42094244-42094263 Msa0600540:CDS 25.0%
! AAATATAATGTCGGATAACT+TGG - chr4_2:42094922-42094941 None:intergenic 25.0%
! TGCAAACGAAAATATAATGT+CGG - chr4_2:42094931-42094950 None:intergenic 25.0%
! GAACAATTAGAAAAACTTAC+CGG - chr4_2:42095012-42095031 None:intergenic 25.0%
!!! TGTTAGATAATGGAGAATAT+TGG + chr4_2:42095108-42095127 Msa0600540:intron 25.0%
! GAAGAACTTAATCTTTCAAT+TGG + chr4_2:42095146-42095165 Msa0600540:CDS 25.0%
! TATTCAATGAATTTCTTGGT+TGG - chr4_2:42095323-42095342 None:intergenic 25.0%
! GTACTATTCAATGAATTTCT+TGG - chr4_2:42095327-42095346 None:intergenic 25.0%
!!! AAATATCTGGTTTAGGTTTT+GGG - chr4_2:42095409-42095428 None:intergenic 25.0%
!!! TTGATGATGGATTCATATTA+GGG - chr4_2:42095656-42095675 None:intergenic 25.0%
! ATATTAAAGACACTTGATGA+TGG - chr4_2:42095669-42095688 None:intergenic 25.0%
!!! AAAATCAGTAGTGGATAATT+CGG - chr4_2:42095838-42095857 None:intergenic 25.0%
!!! AATTTGTTTTCATCATGTGT+TGG - chr4_2:42096130-42096149 None:intergenic 25.0%
!! TTTTCTATGCATATATATGC+AGG + chr4_2:42097283-42097302 Msa0600540:intron 25.0%
! AAGAATGTTATACCAAAAGT+TGG - chr4_2:42097313-42097332 None:intergenic 25.0%
!! TTTTCTCTTTGATTGGATAA+AGG - chr4_2:42097382-42097401 None:intergenic 25.0%
! TTGTTAAAAGATAACTTCGA+GGG + chr4_2:42097702-42097721 Msa0600540:CDS 25.0%
! TGTACAAGATTATAGAGAAT+TGG - chr4_2:42097833-42097852 None:intergenic 25.0%
!!! CTTAGTTATTTTGATTTTGG+AGG + chr4_2:42098233-42098252 Msa0600540:intron 25.0%
!! ATTTAAAATGGTGACAGAAT+AGG - chr4_2:42098667-42098686 None:intergenic 25.0%
! TTTCTTTCCTGTAATTTGAT+TGG + chr4_2:42099099-42099118 Msa0600540:three_prime_UTR 25.0%
! TTCAGATGTATAGATATTGT+AGG + chr4_2:42099138-42099157 Msa0600540:three_prime_UTR 25.0%
! TCAGATGTATAGATATTGTA+GGG + chr4_2:42099139-42099158 Msa0600540:three_prime_UTR 25.0%
! AAAAAGAAGAATAATTGCGT+AGG - chr4_2:42099201-42099220 None:intergenic 25.0%
AAATAAATGGAAGTGAGTGA+GGG - chr4_2:42092051-42092070 None:intergenic 30.0%
AAAATAAATGGAAGTGAGTG+AGG - chr4_2:42092052-42092071 None:intergenic 30.0%
CAGAACTAAGAATGAACAAA+AGG - chr4_2:42092599-42092618 None:intergenic 30.0%
!!! TTTCACTTTTTCCAAACCAA+TGG - chr4_2:42092637-42092656 None:intergenic 30.0%
!!! AATGGTCTTATGCTGTTTTT+TGG + chr4_2:42092720-42092739 Msa0600540:CDS 30.0%
!!! TATGCTGTTTTTTGGAAGAT+CGG + chr4_2:42092728-42092747 Msa0600540:CDS 30.0%
! AATGTTGTTGGTGTTTGATT+TGG + chr4_2:42093012-42093031 Msa0600540:intron 30.0%
!!! GTGTTTGATTTGGACTTTTT+TGG + chr4_2:42093022-42093041 Msa0600540:intron 30.0%
!! TTAGATTCTATTTCTGTGGT+TGG + chr4_2:42093101-42093120 Msa0600540:intron 30.0%
CCAAAACAAGAACAAAAATG+TGG - chr4_2:42093146-42093165 None:intergenic 30.0%
!! CCACATTTTTGTTCTTGTTT+TGG + chr4_2:42093143-42093162 Msa0600540:intron 30.0%
!!! ATATGTGCTTTTGTTGTTTC+TGG + chr4_2:42093175-42093194 Msa0600540:intron 30.0%
GTAAGATGCACTTTCTATTT+AGG + chr4_2:42093266-42093285 Msa0600540:intron 30.0%
!! TTAGCTTGTTTGAATCTGTT+TGG + chr4_2:42093329-42093348 Msa0600540:intron 30.0%
! AGAGCATCATAAGTGATTAA+TGG - chr4_2:42093410-42093429 None:intergenic 30.0%
AATAATTCTGTCAATGTTGC+TGG + chr4_2:42094269-42094288 Msa0600540:CDS 30.0%
AATCTCAATAAACGAGGAAA+AGG - chr4_2:42094321-42094340 None:intergenic 30.0%
! TCTCTATTTTGTGTACCTTT+AGG + chr4_2:42094796-42094815 Msa0600540:intron 30.0%
GTACCTTTAGGTATTAAATG+AGG + chr4_2:42094808-42094827 Msa0600540:intron 30.0%
ACAAGAATTATCAGAGACAA+AGG - chr4_2:42095057-42095076 None:intergenic 30.0%
TGTCTCTGATAATTCTTGTT+AGG + chr4_2:42095058-42095077 Msa0600540:intron 30.0%
GTCTCTGATAATTCTTGTTA+GGG + chr4_2:42095059-42095078 Msa0600540:intron 30.0%
TTAGATCCATTAGCTACTAA+GGG - chr4_2:42095300-42095319 None:intergenic 30.0%
! TTTATTTCTCCTCTTAGAAC+AGG - chr4_2:42095354-42095373 None:intergenic 30.0%
!! CAAATATCTGGTTTAGGTTT+TGG - chr4_2:42095410-42095429 None:intergenic 30.0%
!! CTTGATGATGGATTCATATT+AGG - chr4_2:42095657-42095676 None:intergenic 30.0%
TCTAACAATACTTCACTTCT+TGG + chr4_2:42095732-42095751 Msa0600540:CDS 30.0%
!! AAATCAGTAGTGGATAATTC+GGG - chr4_2:42095837-42095856 None:intergenic 30.0%
!!! TTATCCACTACTGATTTTTC+CGG + chr4_2:42095840-42095859 Msa0600540:CDS 30.0%
! TTTTCCGGAAAACAAAAAGT+AGG + chr4_2:42095855-42095874 Msa0600540:CDS 30.0%
TTTCCGGAAAACAAAAAGTA+GGG + chr4_2:42095856-42095875 Msa0600540:CDS 30.0%
! TGATGATGCTTTAAATCAAC+TGG - chr4_2:42095957-42095976 None:intergenic 30.0%
AAGGATAGATGATTTACTTC+AGG + chr4_2:42096001-42096020 Msa0600540:CDS 30.0%
AGGATAGATGATTTACTTCA+GGG + chr4_2:42096002-42096021 Msa0600540:CDS 30.0%
TTCAAAATGAAACTGCTGAA+TGG + chr4_2:42096221-42096240 Msa0600540:CDS 30.0%
TACATTGTTTGCAGATGAAT+TGG + chr4_2:42096253-42096272 Msa0600540:CDS 30.0%
CATTTCATCAGAATTCTGAT+TGG - chr4_2:42096447-42096466 None:intergenic 30.0%
ATTCTGATGAAATGTCATGT+AGG + chr4_2:42096453-42096472 Msa0600540:CDS 30.0%
GAAACAAGTTCTATTAGATC+TGG + chr4_2:42096602-42096621 Msa0600540:CDS 30.0%
! ACTAAGTTGAGAACCATATA+TGG - chr4_2:42096669-42096688 None:intergenic 30.0%
!! TTTGATTTGGAAACTTCTTC+TGG - chr4_2:42096761-42096780 None:intergenic 30.0%
TTTCCAAATCAAACCGTAAA+AGG + chr4_2:42096768-42096787 Msa0600540:CDS 30.0%
! AAAGGTATATACCTCTTTGT+TGG + chr4_2:42096886-42096905 Msa0600540:intron 30.0%
TGAATCGTTATCATCATAAG+AGG - chr4_2:42096977-42096996 None:intergenic 30.0%
! CAAGAAAAGCATATGTTTGA+TGG - chr4_2:42097032-42097051 None:intergenic 30.0%
TTAAATGCCCAACAAAACAA+GGG - chr4_2:42097130-42097149 None:intergenic 30.0%
ATTAAATGCCCAACAAAACA+AGG - chr4_2:42097131-42097150 None:intergenic 30.0%
AAAACTCGTCACATCAAAAT+GGG - chr4_2:42097154-42097173 None:intergenic 30.0%
! TGACGAGTTTTCATTTTCAT+TGG + chr4_2:42097163-42097182 Msa0600540:intron 30.0%
ATCCAATCAAAGAGAAAAGA+AGG + chr4_2:42097384-42097403 Msa0600540:intron 30.0%
! TTCCTTCTTTTCTCTTTGAT+TGG - chr4_2:42097389-42097408 None:intergenic 30.0%
ACTAGCTAAACTCTTCATAT+AGG + chr4_2:42097542-42097561 Msa0600540:intron 30.0%
GAAAAATAAAGACCAGTTAG+CGG - chr4_2:42097647-42097666 None:intergenic 30.0%
GTTGTTAAAAGATAACTTCG+AGG + chr4_2:42097701-42097720 Msa0600540:CDS 30.0%
TAAGATCCTCAACAATGATA+GGG - chr4_2:42097773-42097792 None:intergenic 30.0%
TTAAGATCCTCAACAATGAT+AGG - chr4_2:42097774-42097793 None:intergenic 30.0%
GAACTGTTCATCTTATAAGA+TGG + chr4_2:42098080-42098099 Msa0600540:intron 30.0%
! GATATTTTCTTCAACCAAAC+AGG - chr4_2:42098171-42098190 None:intergenic 30.0%
ATAACTAAGCAAGCATGTTT+AGG - chr4_2:42098222-42098241 None:intergenic 30.0%
AATTAAGTCCGTGTTTAGAT+TGG - chr4_2:42098575-42098594 None:intergenic 30.0%
TATTGCCAAGTAAAAAACCA+TGG + chr4_2:42098596-42098615 Msa0600540:intron 30.0%
TAAACCATCATGTTATCAAC+TGG - chr4_2:42098859-42098878 None:intergenic 30.0%
ACTAGATTTGATGTCAATCA+TGG - chr4_2:42098945-42098964 None:intergenic 30.0%
!! ATCTAGTCTTATTAGACTTC+AGG + chr4_2:42098958-42098977 Msa0600540:three_prime_UTR 30.0%
! GTATAGATATTGTAGGGTTT+TGG + chr4_2:42099145-42099164 Msa0600540:three_prime_UTR 30.0%
CTACTCGAAGAAAGAAAAAA+AGG - chr4_2:42099226-42099245 None:intergenic 30.0%
!!! AGAGAAGAGAATGGTTTTGT+CGG - chr4_2:42091958-42091977 None:intergenic 35.0%
TTAACAACCTTGAATCTCGT+GGG + chr4_2:42092289-42092308 Msa0600540:five_prime_UTR 35.0%
!! GAATGCTACTTTGATTCCAT+TGG + chr4_2:42092618-42092637 Msa0600540:five_prime_UTR 35.0%
! CTACTTTGATTCCATTGGTT+TGG + chr4_2:42092623-42092642 Msa0600540:five_prime_UTR 35.0%
TGGGTTTGGATAAATGTTGT+TGG + chr4_2:42093000-42093019 Msa0600540:intron 35.0%
!!! GACTTTTTTGGAAGCAAAAG+TGG + chr4_2:42093034-42093053 Msa0600540:intron 35.0%
AAGCTGAGCATTTCTACTAA+TGG - chr4_2:42093370-42093389 None:intergenic 35.0%
GACATAACTACTTACATGCA+AGG - chr4_2:42093475-42093494 None:intergenic 35.0%
GTTATGTCTCTGAATCAATC+AGG + chr4_2:42093487-42093506 Msa0600540:intron 35.0%
ATGACCAATCTCCAATCATA+TGG - chr4_2:42093718-42093737 None:intergenic 35.0%
! CTAAGTATGTTTGACTTTGC+AGG + chr4_2:42094069-42094088 Msa0600540:intron 35.0%
TTGAATCCTTAGCTGAGAAT+CGG - chr4_2:42094207-42094226 None:intergenic 35.0%
TTCCTCGTTTATTGAGATTC+AGG + chr4_2:42094322-42094341 Msa0600540:intron 35.0%
ATCCTGAATCTCAATAAACG+AGG - chr4_2:42094327-42094346 None:intergenic 35.0%
! TTGCTGTTATGTAGGATACT+TGG + chr4_2:42094398-42094417 Msa0600540:intron 35.0%
CATTCACAGGAAATCATCAA+TGG + chr4_2:42094429-42094448 Msa0600540:CDS 35.0%
GCACCTCATTTAATACCTAA+AGG - chr4_2:42094814-42094833 None:intergenic 35.0%
! ATATTTTCGTTTGCAGACAG+TGG + chr4_2:42094936-42094955 Msa0600540:intron 35.0%
TATCCGAAGACTATTCAACA+AGG + chr4_2:42095190-42095209 Msa0600540:CDS 35.0%
!! AAGCCTTGTTGAATAGTCTT+CGG - chr4_2:42095196-42095215 None:intergenic 35.0%
GTTAGATCCATTAGCTACTA+AGG - chr4_2:42095301-42095320 None:intergenic 35.0%
ATAGTTACCACAGTTCTGTA+TGG + chr4_2:42095373-42095392 Msa0600540:CDS 35.0%
! GGCTATCAAATATCTGGTTT+AGG - chr4_2:42095416-42095435 None:intergenic 35.0%
ACGAGAGAATACAATTGTGA+AGG + chr4_2:42095455-42095474 Msa0600540:CDS 35.0%
TTGATTCTTCATGTCTGCAA+CGG + chr4_2:42095505-42095524 Msa0600540:CDS 35.0%
! CTAACTGATTCCAATCTGAA+TGG + chr4_2:42095567-42095586 Msa0600540:CDS 35.0%
GATTCCAATCTGAATGGTTT+CGG + chr4_2:42095573-42095592 Msa0600540:CDS 35.0%
TGGTTTCGGTCTTAAACAAA+TGG + chr4_2:42095587-42095606 Msa0600540:CDS 35.0%
!!! ATTTTACCACCATCGGTTTT+CGG - chr4_2:42095699-42095718 None:intergenic 35.0%
AACAATACTTCACTTCTTGG+AGG + chr4_2:42095735-42095754 Msa0600540:CDS 35.0%
GAATCCCAATTTGTAGTAGT+GGG + chr4_2:42095757-42095776 Msa0600540:CDS 35.0%
TCATCCCACTACTACAAATT+GGG - chr4_2:42095764-42095783 None:intergenic 35.0%
TTCATCCCACTACTACAAAT+TGG - chr4_2:42095765-42095784 None:intergenic 35.0%
! TTTTCCGGAAAAATCAGTAG+TGG - chr4_2:42095847-42095866 None:intergenic 35.0%
!!! AAGCCCTACTTTTTGTTTTC+CGG - chr4_2:42095862-42095881 None:intergenic 35.0%
! AAAGCATCATCAAGATGCTT+TGG + chr4_2:42095965-42095984 Msa0600540:CDS 35.0%
ATCTTGTACGCAACTTTCAT+CGG + chr4_2:42096163-42096182 Msa0600540:CDS 35.0%
!! TGATGACTTGTTTGATGTCT+TGG + chr4_2:42096190-42096209 Msa0600540:CDS 35.0%
!! GATGACTTGTTTGATGTCTT+GGG + chr4_2:42096191-42096210 Msa0600540:CDS 35.0%
TTGTTTGCAGATGAATTGGA+TGG + chr4_2:42096257-42096276 Msa0600540:CDS 35.0%
TGCAGAAAAACTGGATAAGA+AGG + chr4_2:42096283-42096302 Msa0600540:CDS 35.0%
ATATTATCGTGACCTACTAC+TGG - chr4_2:42096326-42096345 None:intergenic 35.0%
CCTGATATTGCTTCATTAAC+AGG - chr4_2:42096353-42096372 None:intergenic 35.0%
CCTGTTAATGAAGCAATATC+AGG + chr4_2:42096350-42096369 Msa0600540:CDS 35.0%
AATGAAGCAATATCAGGCAA+TGG + chr4_2:42096356-42096375 Msa0600540:CDS 35.0%
! TAATAGAACTTGTTTCCGCA+GGG - chr4_2:42096598-42096617 None:intergenic 35.0%
TCTCAAACCACTTCCATATA+TGG + chr4_2:42096653-42096672 Msa0600540:CDS 35.0%
TTGAGAACCATATATGGAAG+TGG - chr4_2:42096663-42096682 None:intergenic 35.0%
ATGGTTCTCAACTTAGTTCA+TGG + chr4_2:42096672-42096691 Msa0600540:CDS 35.0%
TGGTTCTCAACTTAGTTCAT+GGG + chr4_2:42096673-42096692 Msa0600540:CDS 35.0%
CGTGAAAATAGTGTTTCAAC+TGG + chr4_2:42096722-42096741 Msa0600540:CDS 35.0%
TTTCAACTGGATACTCTAAG+CGG + chr4_2:42096735-42096754 Msa0600540:CDS 35.0%
! AAGCCTTTTACGGTTTGATT+TGG - chr4_2:42096774-42096793 None:intergenic 35.0%
TGAATCATTTGGCGATCTTT+GGG - chr4_2:42096824-42096843 None:intergenic 35.0%
TTGAATCATTTGGCGATCTT+TGG - chr4_2:42096825-42096844 None:intergenic 35.0%
TTACGTGAAATTGTGCCTAA+TGG + chr4_2:42096860-42096879 Msa0600540:CDS 35.0%
GTATATACCTTTGCTCCATT+AGG - chr4_2:42096878-42096897 None:intergenic 35.0%
!!! TTGCAATTCCCTTGTTTTGT+TGG + chr4_2:42097119-42097138 Msa0600540:intron 35.0%
!!! TGCAATTCCCTTGTTTTGTT+GGG + chr4_2:42097120-42097139 Msa0600540:intron 35.0%
GAAAACTCGTCACATCAAAA+TGG - chr4_2:42097155-42097174 None:intergenic 35.0%
! TATGCAGGTATACCAACTTT+TGG + chr4_2:42097298-42097317 Msa0600540:intron 35.0%
TTCAAGAAAGTTACCATCTG+CGG + chr4_2:42097620-42097639 Msa0600540:intron 35.0%
GTGCAGATTGTTAGTAAAGA+AGG + chr4_2:42097672-42097691 Msa0600540:intron 35.0%
CAGATTGTTAGTAAAGAAGG+TGG + chr4_2:42097675-42097694 Msa0600540:intron 35.0%
TTAAAAGATAACTTCGAGGG+AGG + chr4_2:42097705-42097724 Msa0600540:CDS 35.0%
TAAAAGATAACTTCGAGGGA+GGG + chr4_2:42097706-42097725 Msa0600540:CDS 35.0%
TTAGGGTTAACCATCTTGAA+AGG + chr4_2:42097975-42097994 Msa0600540:CDS 35.0%
TAGGGTTAACCATCTTGAAA+GGG + chr4_2:42097976-42097995 Msa0600540:CDS 35.0%
AAAGGATATGTTTCGATGGA+GGG - chr4_2:42098423-42098442 None:intergenic 35.0%
ACATATCCTTTGTGCATGTT+TGG + chr4_2:42098432-42098451 Msa0600540:intron 35.0%
!!! TACAGCCATGGTTTTTTACT+TGG - chr4_2:42098604-42098623 None:intergenic 35.0%
CATCACAATATTTACAGCCA+TGG - chr4_2:42098616-42098635 None:intergenic 35.0%
AAATAGGGATGTAACAAGGA+TGG + chr4_2:42098765-42098784 Msa0600540:CDS 35.0%
CAACACACCAATCAAATTAC+AGG - chr4_2:42099109-42099128 None:intergenic 35.0%
CTGTAATTTGATTGGTGTGT+TGG + chr4_2:42099107-42099126 Msa0600540:three_prime_UTR 35.0%
!!! ATTGTAGGGTTTTGGACATA+AGG + chr4_2:42099153-42099172 Msa0600540:three_prime_UTR 35.0%
!!! TTGTAGGGTTTTGGACATAA+GGG + chr4_2:42099154-42099173 Msa0600540:three_prime_UTR 35.0%
CAGAAAACACGATAACAACA+AGG - chr4_2:42099341-42099360 None:intergenic 35.0%
! GTTGTTATCGTGTTTTCTGT+TGG + chr4_2:42099342-42099361 Msa0600540:three_prime_UTR 35.0%
TTTGTCGGATTGTGAAGCTT+TGG - chr4_2:42091943-42091962 None:intergenic 40.0%
ATTGGGAGAAGAGAAGAGAA+TGG - chr4_2:42091967-42091986 None:intergenic 40.0%
!! AGAAAAGGGAAGGGTTTTGA+AGG - chr4_2:42092022-42092041 None:intergenic 40.0%
AGTGAGGGTTGTTGAGAAAA+GGG - chr4_2:42092036-42092055 None:intergenic 40.0%
CGAGATTCAAGGTTGTTAAG+AGG - chr4_2:42092288-42092307 None:intergenic 40.0%
CTTAACAACCTTGAATCTCG+TGG + chr4_2:42092288-42092307 Msa0600540:five_prime_UTR 40.0%
TACTCTCTCTCTCTCTTTAC+CGG + chr4_2:42092404-42092423 Msa0600540:five_prime_UTR 40.0%
CTATTGTCAGTTTCTTGCAC+CGG - chr4_2:42092441-42092460 None:intergenic 40.0%
GATCCAGAGAGAAAAAGAAG+TGG + chr4_2:42092469-42092488 Msa0600540:five_prime_UTR 40.0%
GAAAAAGAAGTGGTGGTTTG+AGG + chr4_2:42092479-42092498 Msa0600540:five_prime_UTR 40.0%
GTTTGAGGACAAAACAAGCA+GGG + chr4_2:42092494-42092513 Msa0600540:five_prime_UTR 40.0%
! TGTCGTGGTAGTTAGTTTCT+AGG + chr4_2:42092526-42092545 Msa0600540:five_prime_UTR 40.0%
! CTTTGAAGACTCTTTGTGCT+AGG + chr4_2:42092693-42092712 Msa0600540:CDS 40.0%
CTCTTTGTGCTAGGAATCAA+TGG + chr4_2:42092702-42092721 Msa0600540:CDS 40.0%
TCTCTGAATCAATCAGGAGA+TGG + chr4_2:42093493-42093512 Msa0600540:intron 40.0%
TCAATCAGGAGATGGAATCA+AGG + chr4_2:42093501-42093520 Msa0600540:intron 40.0%
ACTCCAAACAGCCATATGAT+TGG + chr4_2:42093704-42093723 Msa0600540:intron 40.0%
TCTCCAATCATATGGCTGTT+TGG - chr4_2:42093710-42093729 None:intergenic 40.0%
ACAGCCATATGATTGGAGAT+TGG + chr4_2:42093711-42093730 Msa0600540:intron 40.0%
ACTTTGCAGGCTGTTAATCT+GGG + chr4_2:42094082-42094101 Msa0600540:intron 40.0%
! TTTTGTGGAAGGAAAGCTGA+TGG - chr4_2:42094131-42094150 None:intergenic 40.0%
! TTAGACGTTCCAACGTTTTG+TGG - chr4_2:42094146-42094165 None:intergenic 40.0%
TTTCTTCCGATTCTCAGCTA+AGG + chr4_2:42094198-42094217 Msa0600540:CDS 40.0%
TTCTCAGCTAAGGATTCAAG+AGG + chr4_2:42094208-42094227 Msa0600540:CDS 40.0%
TCATCAAAACTCCATACCTC+TGG - chr4_2:42094491-42094510 None:intergenic 40.0%
GAGTATGAACCTATGAAGCA+CGG + chr4_2:42094550-42094569 Msa0600540:intron 40.0%
CATATGTGTCAGTGTTGTGT+CGG - chr4_2:42094674-42094693 None:intergenic 40.0%
AATGTCGGATAACTTGGATC+AGG - chr4_2:42094916-42094935 None:intergenic 40.0%
! TCAACTTGGTTCTTTCTTGC+CGG + chr4_2:42094990-42095009 Msa0600540:CDS 40.0%
TTTCAATTGGGACATGTTCC+TGG + chr4_2:42095159-42095178 Msa0600540:CDS 40.0%
! CTTTCAAGTGAAAGACACAC+CGG + chr4_2:42095213-42095232 Msa0600540:CDS 40.0%
AACAGAATCAGTCACAGATC+CGG - chr4_2:42095235-42095254 None:intergenic 40.0%
! CAGTTTGAGGTAATGACATG+CGG - chr4_2:42095273-42095292 None:intergenic 40.0%
! AGTACAATGCCTGTTCTAAG+AGG + chr4_2:42095342-42095361 Msa0600540:CDS 40.0%
!!! TGGTTTAGGTTTTGGGATTG+AGG - chr4_2:42095402-42095421 None:intergenic 40.0%
GGCAAAGGCTATCAAATATC+TGG - chr4_2:42095422-42095441 None:intergenic 40.0%
CATGAAGAATCAAGACTTGC+AGG - chr4_2:42095498-42095517 None:intergenic 40.0%
AAGACCGAAACCATTCAGAT+TGG - chr4_2:42095580-42095599 None:intergenic 40.0%
AATGGAGCAACAAGTCTTCT+CGG + chr4_2:42095605-42095624 Msa0600540:CDS 40.0%
AACAAGTCTTCTCGGGTATT+GGG + chr4_2:42095613-42095632 Msa0600540:CDS 40.0%
GGAATCCCAATTTGTAGTAG+TGG + chr4_2:42095756-42095775 Msa0600540:CDS 40.0%
GGAAAACAAAAAGTAGGGCT+TGG + chr4_2:42095861-42095880 Msa0600540:CDS 40.0%
ATCATCTATCCTTTGATCCG+AGG - chr4_2:42095994-42096013 None:intergenic 40.0%
TCACAATAAAGAGACGGTGA+TGG - chr4_2:42096038-42096057 None:intergenic 40.0%
ATCACCGTCTCTTTATTGTG+AGG + chr4_2:42096037-42096056 Msa0600540:CDS 40.0%
TGCTCCTCACAATAAAGAGA+CGG - chr4_2:42096044-42096063 None:intergenic 40.0%
GGCAATCACGAAGAAAATCA+GGG - chr4_2:42096088-42096107 None:intergenic 40.0%
AGGCAATCACGAAGAAAATC+AGG - chr4_2:42096089-42096108 None:intergenic 40.0%
GGTTAGTGACATCTTTATCG+AGG - chr4_2:42096109-42096128 None:intergenic 40.0%
TCTTGTACGCAACTTTCATC+GGG + chr4_2:42096164-42096183 Msa0600540:CDS 40.0%
TGAAACTGCTGAATGGAAAC+TGG + chr4_2:42096228-42096247 Msa0600540:CDS 40.0%
! TCTACGAGTTTTCCAGTAGT+AGG + chr4_2:42096311-42096330 Msa0600540:CDS 40.0%
TGAAATGTCATGTAGGACCA+CGG + chr4_2:42096460-42096479 Msa0600540:CDS 40.0%
!!! GTTGTTTGGTTTTCCCAAGA+CGG + chr4_2:42096559-42096578 Msa0600540:CDS 40.0%
! CTAATAGAACTTGTTTCCGC+AGG - chr4_2:42096599-42096618 None:intergenic 40.0%
TTCTCAACTTAGTTCATGGG+TGG + chr4_2:42096676-42096695 Msa0600540:CDS 40.0%
AACCGTAAAAGGCTTAAACC+TGG + chr4_2:42096779-42096798 Msa0600540:CDS 40.0%
! CTCCAGGTTTAAGCCTTTTA+CGG - chr4_2:42096784-42096803 None:intergenic 40.0%
TCACGCGATCTTGAATCATT+TGG - chr4_2:42096835-42096854 None:intergenic 40.0%
AATTGTGCCTAATGGAGCAA+AGG + chr4_2:42096868-42096887 Msa0600540:CDS 40.0%
TGTGATAAAGGCCAACAAAG+AGG - chr4_2:42096900-42096919 None:intergenic 40.0%
CTGATAAGCTGAAACAGACT+GGG + chr4_2:42097071-42097090 Msa0600540:CDS 40.0%
TGATAAGCTGAAACAGACTG+GGG + chr4_2:42097072-42097091 Msa0600540:CDS 40.0%
AAAAGATAACTTCGAGGGAG+GGG + chr4_2:42097707-42097726 Msa0600540:CDS 40.0%
ATTCTCACAGATGCTTTGTG+AGG + chr4_2:42097911-42097930 Msa0600540:intron 40.0%
! GAAATAGCCGACTTAATCAG+AGG + chr4_2:42097951-42097970 Msa0600540:CDS 40.0%
CCCTAATCCTCTGATTAAGT+CGG - chr4_2:42097961-42097980 None:intergenic 40.0%
CCGACTTAATCAGAGGATTA+GGG + chr4_2:42097958-42097977 Msa0600540:CDS 40.0%
AGGGTTAACCATCTTGAAAG+GGG + chr4_2:42097977-42097996 Msa0600540:CDS 40.0%
CAGGCTTACGTGCAAAATTA+AGG - chr4_2:42098152-42098171 None:intergenic 40.0%
! ATTTTGCACGTAAGCCTGTT+TGG + chr4_2:42098154-42098173 Msa0600540:intron 40.0%
ACTAAGCAAGCATGTTTAGG+AGG - chr4_2:42098219-42098238 None:intergenic 40.0%
CAAAGGATATGTTTCGATGG+AGG - chr4_2:42098424-42098443 None:intergenic 40.0%
GCACAAAGGATATGTTTCGA+TGG - chr4_2:42098427-42098446 None:intergenic 40.0%
TCCTTTGTGCATGTTTGGAT+TGG + chr4_2:42098437-42098456 Msa0600540:intron 40.0%
! TTTGTGCATGTTTGGATTGG+CGG + chr4_2:42098440-42098459 Msa0600540:intron 40.0%
! TTTTGGTGAAAGCTGCACTT+TGG - chr4_2:42098510-42098529 None:intergenic 40.0%
! CCAATGTGCAATCGTGATTT+TGG - chr4_2:42098527-42098546 None:intergenic 40.0%
CCAAAATCACGATTGCACAT+TGG + chr4_2:42098524-42098543 Msa0600540:intron 40.0%
GTTTAGATTGGCAAGGAGAT+TGG - chr4_2:42098563-42098582 None:intergenic 40.0%
TCTCCTTGCCAATCTAAACA+CGG + chr4_2:42098564-42098583 Msa0600540:intron 40.0%
AGGCAAATAGGGATGTAACA+AGG + chr4_2:42098761-42098780 Msa0600540:intron 40.0%
! CATGTCACTAGTTCGACTTT+TGG + chr4_2:42098795-42098814 Msa0600540:CDS 40.0%
!!! ACTTTTGGAGCAAACAGCAA+AGG + chr4_2:42098810-42098829 Msa0600540:CDS 40.0%
!!! CTTTTGGAGCAAACAGCAAA+GGG + chr4_2:42098811-42098830 Msa0600540:CDS 40.0%
!! TGCTCCAGTTGATAACATGA+TGG + chr4_2:42098852-42098871 Msa0600540:CDS 40.0%
!! AAGAAAACTAGGTGGGTTGT+GGG - chr4_2:42098891-42098910 None:intergenic 40.0%
CATTCCAGACCAAGAAAACT+AGG - chr4_2:42098902-42098921 None:intergenic 40.0%
CTATCTTGGCAAAGTACAGA+AGG - chr4_2:42099038-42099057 None:intergenic 40.0%
CCTAAAGCTTCAAGCTATCT+TGG - chr4_2:42099052-42099071 None:intergenic 40.0%
CCAAGATAGCTTGAAGCTTT+AGG + chr4_2:42099049-42099068 Msa0600540:three_prime_UTR 40.0%
!!! TGTAGGGTTTTGGACATAAG+GGG + chr4_2:42099155-42099174 Msa0600540:three_prime_UTR 40.0%
AGAATAATTGCGTAGGCTGA+TGG - chr4_2:42099194-42099213 None:intergenic 40.0%
GGGTTGTTGAGAAAAGGGAA+GGG - chr4_2:42092031-42092050 None:intergenic 45.0%
AGGGTTGTTGAGAAAAGGGA+AGG - chr4_2:42092032-42092051 None:intergenic 45.0%
GAGTGAGGGTTGTTGAGAAA+AGG - chr4_2:42092037-42092056 None:intergenic 45.0%
ACACTATCCCACGAGATTCA+AGG - chr4_2:42092299-42092318 None:intergenic 45.0%
TTTACCGGAGGATGGAATTC+CGG + chr4_2:42092419-42092438 Msa0600540:five_prime_UTR 45.0%
! CCACCACTTCTTTTTCTCTC+TGG - chr4_2:42092475-42092494 None:intergenic 45.0%
CCAGAGAGAAAAAGAAGTGG+TGG + chr4_2:42092472-42092491 Msa0600540:five_prime_UTR 45.0%
GGTTTGAGGACAAAACAAGC+AGG + chr4_2:42092493-42092512 Msa0600540:five_prime_UTR 45.0%
CAGGAGATGGAATCAAGGTT+TGG + chr4_2:42093506-42093525 Msa0600540:intron 45.0%
GACTTTGCAGGCTGTTAATC+TGG + chr4_2:42094081-42094100 Msa0600540:intron 45.0%
GCTTTCCTTCCACAAAACGT+TGG + chr4_2:42094134-42094153 Msa0600540:CDS 45.0%
! ACGTTCCAACGTTTTGTGGA+AGG - chr4_2:42094142-42094161 None:intergenic 45.0%
TTGCCTTACCAAGACAGAGA+AGG + chr4_2:42094167-42094186 Msa0600540:CDS 45.0%
TGCCTTACCAAGACAGAGAA+GGG + chr4_2:42094168-42094187 Msa0600540:CDS 45.0%
TCTGTCAATGTTGCTGGTCA+AGG + chr4_2:42094275-42094294 Msa0600540:CDS 45.0%
CTGTCAATGTTGCTGGTCAA+GGG + chr4_2:42094276-42094295 Msa0600540:CDS 45.0%
!! GCTGCTCTTTGCTGTTATGT+AGG + chr4_2:42094390-42094409 Msa0600540:intron 45.0%
CAAAGACGTATATCCACCAG+AGG + chr4_2:42094472-42094491 Msa0600540:CDS 45.0%
ACGTATATCCACCAGAGGTA+TGG + chr4_2:42094477-42094496 Msa0600540:intron 45.0%
TCAAAACTCCATACCTCTGG+TGG - chr4_2:42094488-42094507 None:intergenic 45.0%
GAGTATGAACCTACGAAGCA+CGG + chr4_2:42094601-42094620 Msa0600540:intron 45.0%
! TTATTATCGGTGTCCGTGTC+CGG + chr4_2:42094723-42094742 Msa0600540:intron 45.0%
!! ATACCAATGAAGCACCGACA+CGG - chr4_2:42094752-42094771 None:intergenic 45.0%
! GTGCATTGCCAATTTTCAGC+TGG + chr4_2:42094830-42094849 Msa0600540:CDS 45.0%
CCTGCATTCCAGCTGAAAAT+TGG - chr4_2:42094841-42094860 None:intergenic 45.0%
! CCAATTTTCAGCTGGAATGC+AGG + chr4_2:42094838-42094857 Msa0600540:CDS 45.0%
! TTTTCGTTTGCAGACAGTGG+TGG + chr4_2:42094939-42094958 Msa0600540:intron 45.0%
TTATTCCTGTGCTTCCCCAT+GGG + chr4_2:42094962-42094981 Msa0600540:CDS 45.0%
! ACCAAGTTGAACAACCCCAT+GGG - chr4_2:42094980-42094999 None:intergenic 45.0%
! AACCAAGTTGAACAACCCCA+TGG - chr4_2:42094981-42095000 None:intergenic 45.0%
!! ACATGCGGATTAGAAGACAC+GGG - chr4_2:42095258-42095277 None:intergenic 45.0%
!! GACATGCGGATTAGAAGACA+CGG - chr4_2:42095259-42095278 None:intergenic 45.0%
TGATAGCCTTTGCCAACCAA+AGG + chr4_2:42095428-42095447 Msa0600540:CDS 45.0%
GTATTCTCTCGTTGAGCCTT+TGG - chr4_2:42095447-42095466 None:intergenic 45.0%
ATGGAGCAACAAGTCTTCTC+GGG + chr4_2:42095606-42095625 Msa0600540:CDS 45.0%
CAACAAGTCTTCTCGGGTAT+TGG + chr4_2:42095612-42095631 Msa0600540:CDS 45.0%
ATGTCTCAACCGAAAACCGA+TGG + chr4_2:42095687-42095706 Msa0600540:CDS 45.0%
!! CAGTAGTGGATAATTCGGGA+GGG - chr4_2:42095833-42095852 None:intergenic 45.0%
!! TCAGTAGTGGATAATTCGGG+AGG - chr4_2:42095834-42095853 None:intergenic 45.0%
GCCAATCACATGCATCTAGA+AGG + chr4_2:42095912-42095931 Msa0600540:CDS 45.0%
GCCTTCTAGATGCATGTGAT+TGG - chr4_2:42095916-42095935 None:intergenic 45.0%
TCAAGATGCTTTGGCTACCT+CGG + chr4_2:42095974-42095993 Msa0600540:CDS 45.0%
CTTGTTTGATGTCTTGGGCA+TGG + chr4_2:42096196-42096215 Msa0600540:CDS 45.0%
GGATGGCAATGCAGAAAAAC+TGG + chr4_2:42096274-42096293 Msa0600540:CDS 45.0%
GGTGATCAGTGTTTGTTCCT+GGG - chr4_2:42096388-42096407 None:intergenic 45.0%
AGGTGATCAGTGTTTGTTCC+TGG - chr4_2:42096389-42096408 None:intergenic 45.0%
TGATCACCTGTTAGATGCTG+TGG + chr4_2:42096400-42096419 Msa0600540:CDS 45.0%
TGTACTAATCCTTGTCACCG+TGG - chr4_2:42096480-42096499 None:intergenic 45.0%
TATGCGCGATAATGTTAGCG+AGG + chr4_2:42096532-42096551 Msa0600540:CDS 45.0%
ATGCGCGATAATGTTAGCGA+GGG + chr4_2:42096533-42096552 Msa0600540:CDS 45.0%
!!! CTTGTTTTGACCTCCGTCTT+GGG - chr4_2:42096575-42096594 None:intergenic 45.0%
GGCTGCAGCAAAGATAATGT+TGG + chr4_2:42096623-42096642 Msa0600540:CDS 45.0%
TTAAACCTGGAGAGAACCCA+AGG + chr4_2:42096792-42096811 Msa0600540:CDS 45.0%
GCATAGACGCTCTTCTTGAA+AGG + chr4_2:42097005-42097024 Msa0600540:CDS 45.0%
GCTGATAAGCTGAAACAGAC+TGG + chr4_2:42097070-42097089 Msa0600540:CDS 45.0%
AACAGACGACGTCTTTACCT+TGG - chr4_2:42097101-42097120 None:intergenic 45.0%
! TGAGGTTGGCTCACAATCAA+TGG + chr4_2:42097743-42097762 Msa0600540:CDS 45.0%
GGTTTGCCCTATCATTGTTG+AGG + chr4_2:42097764-42097783 Msa0600540:CDS 45.0%
ACCTCTTTAACCTGCTTGCT+TGG + chr4_2:42097886-42097905 Msa0600540:intron 45.0%
ACCAAGCAAGCAGGTTAAAG+AGG - chr4_2:42097890-42097909 None:intergenic 45.0%
GTGAGAATAACCAAGCAAGC+AGG - chr4_2:42097899-42097918 None:intergenic 45.0%
CACAGATGCTTTGTGAGGAA+CGG + chr4_2:42097916-42097935 Msa0600540:intron 45.0%
ACAGATGCTTTGTGAGGAAC+GGG + chr4_2:42097917-42097936 Msa0600540:intron 45.0%
! GCCGACTTAATCAGAGGATT+AGG + chr4_2:42097957-42097976 Msa0600540:CDS 45.0%
AACCATCTTGAAAGGGGTCA+TGG + chr4_2:42097983-42098002 Msa0600540:CDS 45.0%
TTCCATGACCCCTTTCAAGA+TGG - chr4_2:42097988-42098007 None:intergenic 45.0%
AAGCTCGCAATGACAAGATC+TGG + chr4_2:42098006-42098025 Msa0600540:CDS 45.0%
AGCTCGCAATGACAAGATCT+GGG + chr4_2:42098007-42098026 Msa0600540:CDS 45.0%
GCCAATCCAAACATGCACAA+AGG - chr4_2:42098441-42098460 None:intergenic 45.0%
AGTCCGTGTTTAGATTGGCA+AGG - chr4_2:42098570-42098589 None:intergenic 45.0%
!! CAAGAAAACTAGGTGGGTTG+TGG - chr4_2:42098892-42098911 None:intergenic 45.0%
!! CACAACCCACCTAGTTTTCT+TGG + chr4_2:42098890-42098909 Msa0600540:exon 45.0%
CCAGACCAAGAAAACTAGGT+GGG - chr4_2:42098898-42098917 None:intergenic 45.0%
TCCAGACCAAGAAAACTAGG+TGG - chr4_2:42098899-42098918 None:intergenic 45.0%
GAGATGCTCTTCACTAACTG+CGG - chr4_2:42099003-42099022 None:intergenic 45.0%
!!! GTAGGGTTTTGGACATAAGG+GGG + chr4_2:42099156-42099175 Msa0600540:three_prime_UTR 45.0%
!!! TAGGGTTTTGGACATAAGGG+GGG + chr4_2:42099157-42099176 Msa0600540:three_prime_UTR 45.0%
!! AAATAAAATAGTTAAAAAAA+AGG - chr4_2:42097349-42097368 None:intergenic 5.0%
! TGAAGCTTTGGTGTGGTCAG+TGG - chr4_2:42091931-42091950 None:intergenic 50.0%
! CGGATTGTGAAGCTTTGGTG+TGG - chr4_2:42091938-42091957 None:intergenic 50.0%
TCCCAATGTCTCAGACTCAG+TGG + chr4_2:42091980-42091999 Msa0600540:five_prime_UTR 50.0%
! GCCACTGAGTCTGAGACATT+GGG - chr4_2:42091984-42092003 None:intergenic 50.0%
! AGCCACTGAGTCTGAGACAT+TGG - chr4_2:42091985-42092004 None:intergenic 50.0%
TCTCTCTCTCTCTTTACCGG+AGG + chr4_2:42092407-42092426 Msa0600540:five_prime_UTR 50.0%
TCTCTCTCTTTACCGGAGGA+TGG + chr4_2:42092411-42092430 Msa0600540:five_prime_UTR 50.0%
AGGACAAAACAAGCAGGGAG+AGG + chr4_2:42092499-42092518 Msa0600540:five_prime_UTR 50.0%
GGAAGGAAAGCTGATGGCAA+AGG - chr4_2:42094125-42094144 None:intergenic 50.0%
CACCCTTCTCTGTCTTGGTA+AGG - chr4_2:42094173-42094192 None:intergenic 50.0%
CAATGTTGCTGGTCAAGGGT+TGG + chr4_2:42094280-42094299 Msa0600540:intron 50.0%
TCCTCAGATTAGGTGTGTCC+TGG + chr4_2:42094628-42094647 Msa0600540:intron 50.0%
ACCAGGACACACCTAATCTG+AGG - chr4_2:42094632-42094651 None:intergenic 50.0%
GATTAGGTGTGTCCTGGTGT+CGG + chr4_2:42094634-42094653 Msa0600540:intron 50.0%
GTTATTCCTGTGCTTCCCCA+TGG + chr4_2:42094961-42094980 Msa0600540:CDS 50.0%
TATTCCTGTGCTTCCCCATG+GGG + chr4_2:42094963-42094982 Msa0600540:CDS 50.0%
! CCAAGTTGAACAACCCCATG+GGG - chr4_2:42094979-42094998 None:intergenic 50.0%
! TACTAAGGGAGCGCAGTTTG+AGG - chr4_2:42095286-42095305 None:intergenic 50.0%
TGCGCTCCCTTAGTAGCTAA+TGG + chr4_2:42095291-42095310 Msa0600540:CDS 50.0%
GTTGAGCCTTTGGTTGGCAA+AGG - chr4_2:42095437-42095456 None:intergenic 50.0%
TCTCTCGTTGAGCCTTTGGT+TGG - chr4_2:42095443-42095462 None:intergenic 50.0%
!! AAGTCTTCTCGGGTATTGGG+AGG + chr4_2:42095616-42095635 Msa0600540:CDS 50.0%
! GGTATTGGGAGGCAAAGTCA+TGG + chr4_2:42095627-42095646 Msa0600540:CDS 50.0%
TCTCAACCGAAAACCGATGG+TGG + chr4_2:42095690-42095709 Msa0600540:CDS 50.0%
CTTTGGCTACCTCGGATCAA+AGG + chr4_2:42095982-42096001 Msa0600540:CDS 50.0%
!! GAGACGGTGATGGAATCTTC+AGG - chr4_2:42096028-42096047 None:intergenic 50.0%
! TCAGGCAATGGCATTTTCCC+AGG + chr4_2:42096368-42096387 Msa0600540:CDS 50.0%
TCGAGACCACAGCATCTAAC+AGG - chr4_2:42096409-42096428 None:intergenic 50.0%
GTGGTCTCGAAGACTCAATC+TGG + chr4_2:42096419-42096438 Msa0600540:CDS 50.0%
ATCTGCATGCTGGTAGGAGA+AGG - chr4_2:42096512-42096531 None:intergenic 50.0%
CGCATAATCTGCATGCTGGT+AGG - chr4_2:42096518-42096537 None:intergenic 50.0%
ATCGCGCATAATCTGCATGC+TGG - chr4_2:42096522-42096541 None:intergenic 50.0%
TGCGCGATAATGTTAGCGAG+GGG + chr4_2:42096534-42096553 Msa0600540:CDS 50.0%
!!! GTTTGGTTTTCCCAAGACGG+AGG + chr4_2:42096562-42096581 Msa0600540:CDS 50.0%
!!! GCTTGTTTTGACCTCCGTCT+TGG - chr4_2:42096576-42096595 None:intergenic 50.0%
CTTAGTTCATGGGTGGAGAG+TGG + chr4_2:42096683-42096702 Msa0600540:CDS 50.0%
!! ATTTGGCGATCTTTGGGACG+AGG - chr4_2:42096818-42096837 None:intergenic 50.0%
GAAACAGACTGGGGAATCCA+AGG + chr4_2:42097081-42097100 Msa0600540:CDS 50.0%
GCTACATGGGCATATGAGGT+TGG + chr4_2:42097729-42097748 Msa0600540:CDS 50.0%
TACCTCGACTAGCATCTGAC+GGG - chr4_2:42097802-42097821 None:intergenic 50.0%
GTACCTCGACTAGCATCTGA+CGG - chr4_2:42097803-42097822 None:intergenic 50.0%
CAGATGCTTTGTGAGGAACG+GGG + chr4_2:42097918-42097937 Msa0600540:intron 50.0%
GTTTCGATGGAGGGCTTGAA+GGG - chr4_2:42098414-42098433 None:intergenic 50.0%
TGTTTCGATGGAGGGCTTGA+AGG - chr4_2:42098415-42098434 None:intergenic 50.0%
!! GTTTGGATTGGCGGTGAGTT+TGG + chr4_2:42098449-42098468 Msa0600540:intron 50.0%
TTGGAGCAAACAGCAAAGGG+AGG + chr4_2:42098814-42098833 Msa0600540:CDS 50.0%
!! CCCACCTAGTTTTCTTGGTC+TGG + chr4_2:42098895-42098914 Msa0600540:exon 50.0%
! TTTTGGACATAAGGGGGGCA+AGG + chr4_2:42099162-42099181 Msa0600540:three_prime_UTR 50.0%
TGCACCGGAATTCCATCCTC+CGG - chr4_2:42092426-42092445 None:intergenic 55.0%
! ACCAAGACAGAGAAGGGTGC+TGG + chr4_2:42094174-42094193 Msa0600540:CDS 55.0%
ACCAGCACCCTTCTCTGTCT+TGG - chr4_2:42094178-42094197 None:intergenic 55.0%
AGAGCAGCACTCGAGTGAGA+TGG - chr4_2:42094378-42094397 None:intergenic 55.0%
CTTGGACGTGCTGCATTCAC+AGG + chr4_2:42094416-42094435 Msa0600540:CDS 55.0%
!! GAGGAGTGTCCGTGCTTCAT+AGG - chr4_2:42094562-42094581 None:intergenic 55.0%
GCACGGACACTCCTCAGATT+AGG + chr4_2:42094618-42094637 Msa0600540:intron 55.0%
! TCCTGGTGTCGGATACACGT+CGG + chr4_2:42094645-42094664 Msa0600540:intron 55.0%
! TGTCCGTGTCGGTGCTTCAT+TGG + chr4_2:42094746-42094765 Msa0600540:intron 55.0%
CCCCATGGGGTTGTTCAACT+TGG + chr4_2:42094976-42094995 Msa0600540:CDS 55.0%
! TCTTCGGATAGAAGCGCACC+AGG - chr4_2:42095180-42095199 None:intergenic 55.0%
! GAGGCGTCCATACAGAACTG+TGG - chr4_2:42095383-42095402 None:intergenic 55.0%
CATGTAGGACCACGGTGACA+AGG + chr4_2:42096468-42096487 Msa0600540:CDS 55.0%
GCGCGATAATGTTAGCGAGG+GGG + chr4_2:42096535-42096554 Msa0600540:CDS 55.0%
GGAGGTCAAAACAAGCCCTG+CGG + chr4_2:42096580-42096599 Msa0600540:CDS 55.0%
!! GATCTTTGGGACGAGGCCTT+GGG - chr4_2:42096811-42096830 None:intergenic 55.0%
AGGGGCTACATGGGCATATG+AGG + chr4_2:42097725-42097744 Msa0600540:CDS 55.0%
ACCTCGACTAGCATCTGACG+GGG - chr4_2:42097801-42097820 None:intergenic 55.0%
! CTGGGCACGCTTTTCTGTTG+AGG + chr4_2:42098025-42098044 Msa0600540:CDS 55.0%
!! GAGGAGTGTCCGTGCTTCGT+AGG - chr4_2:42094613-42094632 None:intergenic 60.0%
ACCGACGTGTATCCGACACC+AGG - chr4_2:42094649-42094668 None:intergenic 60.0%
!! TGAAGCACCGACACGGACAC+CGG - chr4_2:42094745-42094764 None:intergenic 60.0%
! ACAACCCCATGGGGAAGCAC+AGG - chr4_2:42094970-42094989 None:intergenic 60.0%
!! GTTAGCGAGGGGGCGTTGTT+TGG + chr4_2:42096545-42096564 Msa0600540:CDS 60.0%
!! CGATCTTTGGGACGAGGCCT+TGG - chr4_2:42096812-42096831 None:intergenic 60.0%
ACCATCTGCGGTCCGCTAAC+TGG + chr4_2:42097632-42097651 Msa0600540:intron 60.0%
! ACCAGTTAGCGGACCGCAGA+TGG - chr4_2:42097636-42097655 None:intergenic 60.0%
ACTTCGAGGGAGGGGCTACA+TGG + chr4_2:42097715-42097734 Msa0600540:CDS 60.0%
CTTCGAGGGAGGGGCTACAT+GGG + chr4_2:42097716-42097735 Msa0600540:CDS 60.0%
TCCCCGTCAGATGCTAGTCG+AGG + chr4_2:42097797-42097816 Msa0600540:CDS 60.0%
TGGAGGGCTTGAAGGGCAGT+GGG - chr4_2:42098407-42098426 None:intergenic 60.0%
ATGGAGGGCTTGAAGGGCAG+TGG - chr4_2:42098408-42098427 None:intergenic 60.0%
GCAGGGAGAGGATCGTGTCG+TGG + chr4_2:42092511-42092530 Msa0600540:five_prime_UTR 65.0%
TCCGTGTCCGGTGTCCGTGT+CGG + chr4_2:42094735-42094754 Msa0600540:intron 65.0%
ACCGACACGGACACCGGACA+CGG - chr4_2:42094739-42094758 None:intergenic 65.0%
CGAGGCCTTGGGTTCTCTCC+AGG - chr4_2:42096800-42096819 None:intergenic 65.0%
GGGCTTGAAGGGCAGTGGGA+GGG - chr4_2:42098403-42098422 None:intergenic 65.0%
AGGGCTTGAAGGGCAGTGGG+AGG - chr4_2:42098404-42098423 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 42091927 42099370 42091927 ID=Msa0600540;Name=Msa0600540
chr4_2 mRNA 42091927 42099370 42091927 ID=Msa0600540-mRNA-1;Parent=Msa0600540;Name=Msa0600540-mRNA-1;_AED=0.05;_eAED=0.05;_QI=744|1|1|1|1|1|10|467|923
chr4_2 exon 42091927 42092765 42091927 ID=Msa0600540-mRNA-1:exon:9153;Parent=Msa0600540-mRNA-1
chr4_2 exon 42094091 42094297 42094091 ID=Msa0600540-mRNA-1:exon:9154;Parent=Msa0600540-mRNA-1
chr4_2 exon 42094412 42094493 42094412 ID=Msa0600540-mRNA-1:exon:9155;Parent=Msa0600540-mRNA-1
chr4_2 exon 42094818 42094859 42094818 ID=Msa0600540-mRNA-1:exon:9156;Parent=Msa0600540-mRNA-1
chr4_2 exon 42094952 42095011 42094952 ID=Msa0600540-mRNA-1:exon:9157;Parent=Msa0600540-mRNA-1
chr4_2 exon 42095114 42096889 42095114 ID=Msa0600540-mRNA-1:exon:9158;Parent=Msa0600540-mRNA-1
chr4_2 exon 42097001 42097102 42097001 ID=Msa0600540-mRNA-1:exon:9159;Parent=Msa0600540-mRNA-1
chr4_2 exon 42097678 42097818 42097678 ID=Msa0600540-mRNA-1:exon:9160;Parent=Msa0600540-mRNA-1
chr4_2 exon 42097921 42098046 42097921 ID=Msa0600540-mRNA-1:exon:9161;Parent=Msa0600540-mRNA-1
chr4_2 exon 42098763 42099370 42098763 ID=Msa0600540-mRNA-1:exon:9162;Parent=Msa0600540-mRNA-1
chr4_2 five_prime_UTR 42091927 42092670 42091927 ID=Msa0600540-mRNA-1:five_prime_utr;Parent=Msa0600540-mRNA-1
chr4_2 CDS 42092671 42092765 42092671 ID=Msa0600540-mRNA-1:cds;Parent=Msa0600540-mRNA-1
chr4_2 CDS 42094091 42094297 42094091 ID=Msa0600540-mRNA-1:cds;Parent=Msa0600540-mRNA-1
chr4_2 CDS 42094412 42094493 42094412 ID=Msa0600540-mRNA-1:cds;Parent=Msa0600540-mRNA-1
chr4_2 CDS 42094818 42094859 42094818 ID=Msa0600540-mRNA-1:cds;Parent=Msa0600540-mRNA-1
chr4_2 CDS 42094952 42095011 42094952 ID=Msa0600540-mRNA-1:cds;Parent=Msa0600540-mRNA-1
chr4_2 CDS 42095114 42096889 42095114 ID=Msa0600540-mRNA-1:cds;Parent=Msa0600540-mRNA-1
chr4_2 CDS 42097001 42097102 42097001 ID=Msa0600540-mRNA-1:cds;Parent=Msa0600540-mRNA-1
chr4_2 CDS 42097678 42097818 42097678 ID=Msa0600540-mRNA-1:cds;Parent=Msa0600540-mRNA-1
chr4_2 CDS 42097921 42098046 42097921 ID=Msa0600540-mRNA-1:cds;Parent=Msa0600540-mRNA-1
chr4_2 CDS 42098763 42098903 42098763 ID=Msa0600540-mRNA-1:cds;Parent=Msa0600540-mRNA-1
chr4_2 three_prime_UTR 42098904 42099370 42098904 ID=Msa0600540-mRNA-1:three_prime_utr;Parent=Msa0600540-mRNA-1
Gene Sequence

>Msa0600540

ATGGGGTTTTTGTTGAAAGAAGCTTTGAAGACTCTTTGTGCTAGGAATCAATGGTCTTATGCTGTTTTTTGGAAGATCGGTTGCAATAATTCAAAGCTGTTAATCTGGGAAGATTGCTACTATGAACCTTTGCCATCAGCTTTCCTTCCACAAAACGTTGGAACGTCTAATTTGCCTTACCAAGACAGAGAAGGGTGCTGGTTTTCTTCCGATTCTCAGCTAAGGATTCAAGAGGACGATAGAGTCTGCTCATTGATTAACAAAATGATGGTGAATAATTCTGTCAATGTTGCTGGTCAAGGGATACTTGGACGTGCTGCATTCACAGGAAATCATCAATGGATTCTTTTGAACAATTTCATCAAAGACGTATATCCACCAGAGGTATTAAATGAGGTGCATTGCCAATTTTCAGCTGGAATGCAGACAGTGGTGGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCGATAATGGAGAATATTGGATTTGTGAATGATGTGAAGAACTTAATCTTTCAATTGGGACATGTTCCTGGTGCGCTTCTATCCGAAGACTATTCAACAAGGCTTTCAAGTGAAAGACACACCGGATCTGTGACTGATTCTGTTCCCGTGTCTTCTAATCCGCATGTCATTACCTCAAACTGCGCTCCCTTAGTAGCTAATGGATCTAACCAACCAAGAAATTCATTGAATAGTACAATGCCTGTTCTAAGAGGAGAAATAAATAGTTACCACAGTTCTGTATGGACGCCTCAATCCCAAAACCTAAACCAGATATTTGATAGCCTTTGCCAACCAAAGGCTCAACGAGAGAATACAATTGTGAAGGCTGAAGCTGAAGTGATACCTGCAAGTCTTGATTCTTCATGTCTGCAACGGCGTTCTGTTTCATATAACGCAAGATCTGCACTCAATGAACTAACTGATTCCAATCTGAATGGTTTCGGTCTTAAACAAATGGAGCAACAAGTCTTCTCGGGTATTGGGAGGCAAAGTCATGGTAACCCTAATATGAATCCATCATCAAGTGTCTTTAATATGTCTCAACCGAAAACCGATGGTGGTAAAATTTATTATCAGAATTCTAACAATACTTCACTTCTTGGAGGAATCCCAATTTGTAGTAGTGGGATGAATAATAATCTTTTAAGGACAAATATGATTAACTGCTCAGTTTCAAACCCTCCCGAATTATCCACTACTGATTTTTCCGGAAAACAAAAAGTAGGGCTTGGAATTCAAAACAATAATTCAACTAAAGCTGCCAATCACATGCATCTAGAAGGCTCTTATCAGAAGAATCTTCCAGTTGATTTAAAGCATCATCAAGATGCTTTGGCTACCTCGGATCAAAGGATAGATGATTTACTTCAGGGCCTGAAGATTCCATCACCGTCTCTTTATTGTGAGGAGCATGTGTCTATGAATGATCACATCCCTGATTTTCTTCGTGATTGCCTCGATAAAGATGTCACTAACCAACACATGATGAAAACAAATTTTGAACACGGAGAATCTTGTACGCAACTTTCATCGGGCGATGATGACTTGTTTGATGTCTTGGGCATGGACTTCAAAATGAAACTGCTGAATGGAAACTGGAATACATTGTTTGCAGATGAATTGGATGGCAATGCAGAAAAACTGGATAAGAAGGCAATGTCTACGAGTTTTCCAGTAGTAGGTCACGATAATATTTATCCTGTTAATGAAGCAATATCAGGCAATGGCATTTTCCCAGGAACAAACACTGATCACCTGTTAGATGCTGTGGTCTCGAAGACTCAATCTGGTTCCAATCAGAATTCTGATGAAATGTCATGTAGGACCACGGTGACAAGGATTAGTACAGCGTCTGTACCTTCTCCTACCAGCATGCAGATTATGCGCGATAATGTTAGCGAGGGGGCGTTGTTTGGTTTTCCCAAGACGGAGGTCAAAACAAGCCCTGCGGAAACAAGTTCTATTAGATCTGGCTGCAGCAAAGATAATGTTGGAAACTGTTCTCAAACCACTTCCATATATGGTTCTCAACTTAGTTCATGGGTGGAGAGTGGTAGCAGCAATGTGAAGCGTGAAAATAGTGTTTCAACTGGATACTCTAAGCGGCCAGAAGAAGTTTCCAAATCAAACCGTAAAAGGCTTAAACCTGGAGAGAACCCAAGGCCTCGTCCCAAAGATCGCCAAATGATTCAAGATCGCGTGAAAGAGTTACGTGAAATTGTGCCTAATGGAGCAAAGTGTAGCATAGACGCTCTTCTTGAAAGGACCATCAAACATATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGATAAGCTGAAACAGACTGGGGAATCCAAGATTGTTAGTAAAGAAGGTGGATTGTTGTTAAAAGATAACTTCGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCACAATCAATGGTTTGCCCTATCATTGTTGAGGATCTTAATCATCCCCGTCAGATGCTAGTCGAGATGCTTTGTGAGGAACGGGGTTTCTTTCTTGAAATAGCCGACTTAATCAGAGGATTAGGGTTAACCATCTTGAAAGGGGTCATGGAAGCTCGCAATGACAAGATCTGGGCACGCTTTTCTGTTGAGGCAAATAGGGATGTAACAAGGATGGAAATATTCATGTCACTAGTTCGACTTTTGGAGCAAACAGCAAAGGGAGGCGCAGCTTCATCAAATGCTCCAGTTGATAACATGATGGTTTATCATTCTATCCCACAACCCACCTAG
Protein sequence

>Msa0600540

MGFLLKEALKTLCARNQWSYAVFWKIGCNNSKLLIWEDCYYEPLPSAFLPQNVGTSNLPYQDREGCWFSSDSQLRIQEDDRVCSLINKMMVNNSVNVAGQGILGRAAFTGNHQWILLNNFIKDVYPPEVLNEVHCQFSAGMQTVVVIPVLPHGVVQLGSFLPIMENIGFVNDVKNLIFQLGHVPGALLSEDYSTRLSSERHTGSVTDSVPVSSNPHVITSNCAPLVANGSNQPRNSLNSTMPVLRGEINSYHSSVWTPQSQNLNQIFDSLCQPKAQRENTIVKAEAEVIPASLDSSCLQRRSVSYNARSALNELTDSNLNGFGLKQMEQQVFSGIGRQSHGNPNMNPSSSVFNMSQPKTDGGKIYYQNSNNTSLLGGIPICSSGMNNNLLRTNMINCSVSNPPELSTTDFSGKQKVGLGIQNNNSTKAANHMHLEGSYQKNLPVDLKHHQDALATSDQRIDDLLQGLKIPSPSLYCEEHVSMNDHIPDFLRDCLDKDVTNQHMMKTNFEHGESCTQLSSGDDDLFDVLGMDFKMKLLNGNWNTLFADELDGNAEKLDKKAMSTSFPVVGHDNIYPVNEAISGNGIFPGTNTDHLLDAVVSKTQSGSNQNSDEMSCRTTVTRISTASVPSPTSMQIMRDNVSEGALFGFPKTEVKTSPAETSSIRSGCSKDNVGNCSQTTSIYGSQLSSWVESGSSNVKRENSVSTGYSKRPEEVSKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNHPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFSVEANRDVTRMEIFMSLVRLLEQTAKGGAASSNAPVDNMMVYHSIPQPT*