Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0607100 | XP_003607281.2 | 99.162 | 955 | 8 | 0 | 1 | 955 | 439 | 1393 | 0.0 | 1937 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0607100 | sp|Q9LJD8|M3KE1_ARATH | 72.216 | 961 | 205 | 14 | 9 | 955 | 456 | 1368 | 0.0 | 1354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0607100 | G7JPL1 | 99.162 | 955 | 8 | 0 | 1 | 955 | 439 | 1393 | 0.0 | 1937 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0582950 | Msa0607100 | 0.876762 | 1.078756e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0607100 | MtrunA17_Chr4g0038501 | 99.162 | 955 | 8 | 0 | 1 | 955 | 439 | 1393 | 0.0 | 1937 |
| Msa0607100 | MtrunA17_Chr4g0038091 | 96.335 | 955 | 26 | 3 | 1 | 955 | 435 | 1380 | 0.0 | 1874 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0607100 | AT3G13530.1 | 72.216 | 961 | 205 | 14 | 9 | 955 | 456 | 1368 | 0.0 | 1354 |
| Msa0607100 | AT3G07980.3 | 68.229 | 960 | 239 | 15 | 9 | 955 | 276 | 1182 | 0.0 | 1257 |
| Msa0607100 | AT3G07980.1 | 68.229 | 960 | 239 | 15 | 9 | 955 | 461 | 1367 | 0.0 | 1255 |
| Msa0607100 | AT3G07980.2 | 66.146 | 960 | 235 | 15 | 9 | 955 | 461 | 1343 | 0.0 | 1207 |
Find 223 sgRNAs with CRISPR-Local
Find 564 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACCACTTTGGCTGTTAA+TGG | 0.183478 | 4_2:+53796236 | Msa0607100:CDS |
| CAAGAAAATGCTTGTCTTGT+TGG | 0.226084 | 4_2:+53791142 | Msa0607100:CDS |
| AGAGTCGCTCCCAAGAAATT+AGG | 0.241992 | 4_2:+53794217 | Msa0607100:CDS |
| CTATCATCACTCGGTGTAAA+AGG | 0.261079 | 4_2:-53789412 | None:intergenic |
| CCCAAGAAATTAGGGACTTT+TGG | 0.269005 | 4_2:+53794226 | Msa0607100:CDS |
| ATAGAAGTTTCCCCTTTATT+TGG | 0.273452 | 4_2:+53796743 | Msa0607100:three_prime_UTR |
| ACCAAAAGTCCCTAATTTCT+TGG | 0.284046 | 4_2:-53794227 | None:intergenic |
| GTTCTCCACAATCAGTTTCT+TGG | 0.291076 | 4_2:-53796538 | None:intergenic |
| CAGGAACAGGCAGCCGAAAA+TGG | 0.295084 | 4_2:+53795451 | Msa0607100:CDS |
| AAAATAAGCAAACCAAATAA+AGG | 0.308359 | 4_2:-53796755 | None:intergenic |
| GAAGGTGCTGCTTCCACATC+TGG | 0.313145 | 4_2:+53794256 | Msa0607100:CDS |
| ATAATATACATACAGGAAAA+TGG | 0.316538 | 4_2:-53796690 | None:intergenic |
| ACCTTCTTGAGGATGAGTTT+TGG | 0.326087 | 4_2:+53795617 | Msa0607100:CDS |
| GACGATGTAATTGATATAGA+TGG | 0.328826 | 4_2:+53789446 | Msa0607100:CDS |
| CTCTTTGGTGGTTATTTAAG+TGG | 0.335128 | 4_2:+53796833 | Msa0607100:three_prime_UTR |
| TGGGAGAAAGAGAGTGAAAT+TGG | 0.336752 | 4_2:+53789368 | Msa0607100:CDS |
| CTACTCAGCAAGAGCAAGTT+AGG | 0.344757 | 4_2:+53793620 | Msa0607100:CDS |
| TAATTTACTCAGGCTTATAA+AGG | 0.347156 | 4_2:+53796313 | Msa0607100:CDS |
| CCCCGATCTGGACGTTTCTC+TGG | 0.350705 | 4_2:+53793670 | Msa0607100:CDS |
| GAGAAACTTCAAAACTTGAT+AGG | 0.360007 | 4_2:+53796570 | Msa0607100:CDS |
| TTCTCCACAATCAGTTTCTT+GGG | 0.364012 | 4_2:-53796537 | None:intergenic |
| GTAACTCAAGGGAGCAGTTA+AGG | 0.371120 | 4_2:+53795566 | Msa0607100:CDS |
| TAGCCCATGACAATGATAAT+AGG | 0.372101 | 4_2:+53795674 | Msa0607100:CDS |
| TTATGGATACAGGGGTATAA+AGG | 0.375590 | 4_2:+53796902 | Msa0607100:intron |
| TCAGGTGTATTGTCTGGTTC+AGG | 0.376175 | 4_2:+53794298 | Msa0607100:CDS |
| ATTAGTTGGTTCATTAAAAC+CGG | 0.381038 | 4_2:+53790816 | Msa0607100:CDS |
| TGTATGTATATTATTTCGTT+GGG | 0.381489 | 4_2:+53796699 | Msa0607100:three_prime_UTR |
| CCTTCTTTGAGTTCAAGATT+TGG | 0.385315 | 4_2:-53794714 | None:intergenic |
| AAATAAGCAAACCAAATAAA+GGG | 0.385529 | 4_2:-53796754 | None:intergenic |
| TTGCCGTGGAATACCTGTTT+TGG | 0.386273 | 4_2:+53792584 | Msa0607100:CDS |
| TCGACTCAACGGCCACGTTC+TGG | 0.389737 | 4_2:+53793169 | Msa0607100:CDS |
| GGCTGATTTCTTATGCTCAA+TGG | 0.391879 | 4_2:+53796858 | Msa0607100:three_prime_UTR |
| GTTCTACCCTATTAAACATC+TGG | 0.400175 | 4_2:-53794507 | None:intergenic |
| GAGTCGCTCCCAAGAAATTA+GGG | 0.401743 | 4_2:+53794218 | Msa0607100:CDS |
| CTCAGCTCATTTCCTTCCGC+AGG | 0.402820 | 4_2:-53789152 | None:intergenic |
| ATATTATTTCGTTGGGGAAA+AGG | 0.404241 | 4_2:+53796706 | Msa0607100:three_prime_UTR |
| TAGGCCTCTTCTTAGCTTGT+TGG | 0.405908 | 4_2:+53793639 | Msa0607100:CDS |
| TCCAGAGAAACGTCCAGATC+GGG | 0.408331 | 4_2:-53793671 | None:intergenic |
| CAACTTCTGTCTCAGGGAAA+TGG | 0.408669 | 4_2:+53792961 | Msa0607100:intron |
| TGTAGTACCTTCAACAAAAT+AGG | 0.408921 | 4_2:-53794532 | None:intergenic |
| ACAATCAGTTTCTTGGGCTG+AGG | 0.409891 | 4_2:-53796531 | None:intergenic |
| TCAAGAAATCCCACCAAAAC+AGG | 0.410631 | 4_2:-53792597 | None:intergenic |
| CCCTCCAGGAGATGCGTACT+TGG | 0.412714 | 4_2:+53789187 | Msa0607100:CDS |
| TGTAATTGATATAGATGGTT+TGG | 0.415785 | 4_2:+53789451 | Msa0607100:CDS |
| GATTAGCATCTATGTCTGTT+GGG | 0.416441 | 4_2:+53793125 | Msa0607100:CDS |
| TAACTCAAGGGAGCAGTTAA+GGG | 0.417877 | 4_2:+53795567 | Msa0607100:CDS |
| CCAGGTAGTGCTACTTCATC+TGG | 0.420683 | 4_2:+53794337 | Msa0607100:CDS |
| GAATAAAACAAATGGTGAAC+TGG | 0.422829 | 4_2:+53793768 | Msa0607100:CDS |
| CCAAAAGTCCCTAATTTCTT+GGG | 0.423004 | 4_2:-53794226 | None:intergenic |
| GTCTTGGTATTTCCGCCAAC+AGG | 0.424110 | 4_2:+53793533 | Msa0607100:CDS |
| GAAATTGGACAGGCAAATAA+TGG | 0.425748 | 4_2:+53789383 | Msa0607100:CDS |
| ACGGCCACGTTCTGGTATCT+TGG | 0.427195 | 4_2:+53793177 | Msa0607100:CDS |
| ATCTACATCCACTTCACATA+TGG | 0.429549 | 4_2:+53789265 | Msa0607100:CDS |
| TTGCTGTACCCGATCGTCCC+CGG | 0.437546 | 4_2:+53792398 | Msa0607100:CDS |
| TTGGTACCTGCAGAGGAAAA+AGG | 0.439382 | 4_2:-53789599 | None:intergenic |
| AAACAACATGGGGAGGTTGC+AGG | 0.439561 | 4_2:+53789230 | Msa0607100:CDS |
| ACTTCTAGCAAGTCAGTTAG+AGG | 0.440818 | 4_2:-53790943 | None:intergenic |
| TTGGAGAAAGAGCCCCGATC+TGG | 0.442817 | 4_2:+53793658 | Msa0607100:CDS |
| CTGTATGTATATTATTTCGT+TGG | 0.443218 | 4_2:+53796698 | Msa0607100:three_prime_UTR |
| GTTAAGGGCTCATGGTGGTT+TGG | 0.444354 | 4_2:+53795582 | Msa0607100:CDS |
| GAGGAATGGAGGACGAAGAA+TGG | 0.446923 | 4_2:-53793309 | None:intergenic |
| CGATTAGCATCTATGTCTGT+TGG | 0.448128 | 4_2:+53793124 | Msa0607100:CDS |
| AAAGTCTACTGAGCAAGCTT+TGG | 0.451295 | 4_2:-53794483 | None:intergenic |
| CGCTATTGATGGCATGTGGC+AGG | 0.451313 | 4_2:+53792991 | Msa0607100:CDS |
| CAGCCAAAGTGGTATTGATC+CGG | 0.451921 | 4_2:-53796229 | None:intergenic |
| GAGGTCTATCAACATCCATT+TGG | 0.454895 | 4_2:-53793351 | None:intergenic |
| TCATCCAAGTACGCATCTCC+TGG | 0.458368 | 4_2:-53789191 | None:intergenic |
| ATGTGTACAAAATGCGGCTC+TGG | 0.459739 | 4_2:-53795763 | None:intergenic |
| GCAAGATTCAAACTCTTCTC+TGG | 0.461832 | 4_2:-53793412 | None:intergenic |
| GCCTCTGAGAATAAAACAAA+TGG | 0.465348 | 4_2:+53793760 | Msa0607100:CDS |
| ATGGTTCATCTCGCTATTGA+TGG | 0.466101 | 4_2:+53792980 | Msa0607100:CDS |
| AGAAACTTCAAAACTTGATA+GGG | 0.466854 | 4_2:+53796571 | Msa0607100:CDS |
| ATCGTATCTCAGACAGCATC+AGG | 0.466946 | 4_2:+53794280 | Msa0607100:CDS |
| GGCAATGCATCTATGATTGA+TGG | 0.467078 | 4_2:+53789293 | Msa0607100:CDS |
| TGACAGAAACTTCCTCGAAC+GGG | 0.470983 | 4_2:+53793581 | Msa0607100:CDS |
| ACGAATCTCCCGGGGACGAT+CGG | 0.471209 | 4_2:-53792407 | None:intergenic |
| TATGATTGATGGAGGAGAAA+AGG | 0.471783 | 4_2:+53789304 | Msa0607100:CDS |
| AAATAAGCGGAGACAGGAAC+AGG | 0.471794 | 4_2:+53795438 | Msa0607100:CDS |
| TTCTCAGAGGCATGCAGCAA+AGG | 0.475856 | 4_2:-53793748 | None:intergenic |
| CCAAATCTTGAACTCAAAGA+AGG | 0.475872 | 4_2:+53794714 | Msa0607100:CDS |
| AATGCGGCTCTGGACAGCTC+TGG | 0.476621 | 4_2:-53795753 | None:intergenic |
| ATCACGTCTTCTGATTCCTC+CGG | 0.477137 | 4_2:-53790835 | None:intergenic |
| GTCAGATTCTAACTACCAAA+TGG | 0.480148 | 4_2:+53793336 | Msa0607100:CDS |
| TCTTTGGTGGTTATTTAAGT+GGG | 0.481912 | 4_2:+53796834 | Msa0607100:three_prime_UTR |
| CCTTCCTATTATCATTGTCA+TGG | 0.483317 | 4_2:-53795678 | None:intergenic |
| TACAATTGCACGAAAGCAAT+GGG | 0.484838 | 4_2:+53789349 | Msa0607100:CDS |
| AAATGCTTGTCTTGTTGGAT+TGG | 0.485876 | 4_2:+53791147 | Msa0607100:CDS |
| AGCAATTTGGATCAGTTGAC+AGG | 0.486039 | 4_2:-53794650 | None:intergenic |
| TCTCAACGTGGAAGGGAAAA+CGG | 0.488875 | 4_2:+53794163 | Msa0607100:CDS |
| TACAGCAGCTTTGTCAGTCA+AGG | 0.495702 | 4_2:+53792449 | Msa0607100:CDS |
| TTACAAACTAATTTACAAAA+CGG | 0.495998 | 4_2:-53796664 | None:intergenic |
| TGTTGCTGATAACCCGTTCG+AGG | 0.499009 | 4_2:-53793593 | None:intergenic |
| GTTGAGTTCAGCAAATTAGT+TGG | 0.499715 | 4_2:+53790802 | Msa0607100:CDS |
| TGCTGTACCCGATCGTCCCC+GGG | 0.500851 | 4_2:+53792399 | Msa0607100:CDS |
| GGACCTGGCAAAAGAGTTGA+GGG | 0.501107 | 4_2:+53789325 | Msa0607100:CDS |
| CAATCAGTTTCTTGGGCTGA+GGG | 0.501754 | 4_2:-53796530 | None:intergenic |
| TCTGCTTGTCAGAAACTCAT+TGG | 0.505127 | 4_2:+53790862 | Msa0607100:CDS |
| AGGAATGGAGGACGAAGAAT+GGG | 0.506216 | 4_2:-53793308 | None:intergenic |
| TCGAACGGGTTATCAGCAAC+AGG | 0.508510 | 4_2:+53793595 | Msa0607100:CDS |
| GAGTTTGAATCTTGCATCCA+GGG | 0.508606 | 4_2:+53793420 | Msa0607100:CDS |
| CTTCCTATTATCATTGTCAT+GGG | 0.508908 | 4_2:-53795677 | None:intergenic |
| TCCACTTCACATATGGCAAA+AGG | 0.509138 | 4_2:+53789272 | Msa0607100:CDS |
| TGCTTCCATACGAATCTCCC+GGG | 0.509294 | 4_2:-53792416 | None:intergenic |
| GCTGCCGCATTGCTTGATTG+AGG | 0.509597 | 4_2:-53793370 | None:intergenic |
| CGAATCTCCCGGGGACGATC+GGG | 0.509985 | 4_2:-53792406 | None:intergenic |
| CAACGAAATAATATACATAC+AGG | 0.510038 | 4_2:-53796697 | None:intergenic |
| TCTCAGAGGCATGCAGCAAA+GGG | 0.510090 | 4_2:-53793747 | None:intergenic |
| CAAGATAAATAAGCGGAGAC+AGG | 0.510370 | 4_2:+53795432 | Msa0607100:CDS |
| AGAGAGAAAACGTGGATCGT+TGG | 0.511105 | 4_2:+53793467 | Msa0607100:CDS |
| CTGCTTCCATACGAATCTCC+CGG | 0.511233 | 4_2:-53792417 | None:intergenic |
| ACAGCATCAGGTGTATTGTC+TGG | 0.514131 | 4_2:+53794292 | Msa0607100:CDS |
| TCAAGCCTTGCAACGAGTAA+TGG | 0.514720 | 4_2:-53796266 | None:intergenic |
| AGAGTTTGAATCTTGCATCC+AGG | 0.516387 | 4_2:+53793419 | Msa0607100:CDS |
| GTCCAGAGAAACGTCCAGAT+CGG | 0.522434 | 4_2:-53793672 | None:intergenic |
| CCAGATGAAGTAGCACTACC+TGG | 0.525805 | 4_2:-53794337 | None:intergenic |
| TGCCCGGATCAATACCACTT+TGG | 0.530797 | 4_2:+53796226 | Msa0607100:CDS |
| CTCATGCATCTCGTAACTCA+AGG | 0.532861 | 4_2:+53795554 | Msa0607100:CDS |
| TTGATGTGATGAACTGCATC+AGG | 0.532918 | 4_2:-53795486 | None:intergenic |
| ATAAGTTGAACAATGCGTTC+AGG | 0.535668 | 4_2:-53795408 | None:intergenic |
| ATCTGTTGATGTCCTGTTGG+CGG | 0.536875 | 4_2:-53793545 | None:intergenic |
| TGTACCCGCTGAAGATTCCC+TGG | 0.537021 | 4_2:-53793437 | None:intergenic |
| TAGTTAGAATCTGACCTTCG+AGG | 0.540629 | 4_2:-53793328 | None:intergenic |
| ACAGCAAAGCTCATGACTGC+AGG | 0.541495 | 4_2:-53792382 | None:intergenic |
| ATTAGCATCTATGTCTGTTG+GGG | 0.541903 | 4_2:+53793126 | Msa0607100:CDS |
| CAGATGTTTCTCAACGTGGA+AGG | 0.543850 | 4_2:+53794155 | Msa0607100:intron |
| AGAATCTGACCTTCGAGGAA+TGG | 0.545164 | 4_2:-53793323 | None:intergenic |
| GAAAGAGAGTGAAATTGGAC+AGG | 0.545390 | 4_2:+53789373 | Msa0607100:CDS |
| CATATTTCAGAAAATCTGCC+CGG | 0.547380 | 4_2:+53796210 | Msa0607100:intron |
| TAACTCCATTACTCGTTGCA+AGG | 0.549297 | 4_2:+53796261 | Msa0607100:CDS |
| TGTCTATTTGAACCTTCTTG+AGG | 0.550469 | 4_2:+53795606 | Msa0607100:CDS |
| AGCCAAAGTGGTATTGATCC+GGG | 0.550603 | 4_2:-53796228 | None:intergenic |
| GAAGTGTATTTATAAGCCTA+AGG | 0.550921 | 4_2:-53793081 | None:intergenic |
| TCCCCATGTTGTTTGTCTGA+CGG | 0.552056 | 4_2:-53789221 | None:intergenic |
| CCAACAGGACATCAACAGAT+AGG | 0.552805 | 4_2:+53793548 | Msa0607100:CDS |
| AACTAATTTGCTGAACTCAA+CGG | 0.555149 | 4_2:-53790800 | None:intergenic |
| ATTGCCTCTGTTGTGCGACA+TGG | 0.555660 | 4_2:+53795531 | Msa0607100:CDS |
| ACATGGGGAGGTTGCAGGTG+AGG | 0.555942 | 4_2:+53789235 | Msa0607100:CDS |
| TAGCTCGGCTTAATTTACTC+AGG | 0.557677 | 4_2:+53796303 | Msa0607100:CDS |
| GGCAATGCATATTGCTTCAG+AGG | 0.559361 | 4_2:-53795514 | None:intergenic |
| TAGAGGAAGTAAACCATGCT+GGG | 0.559499 | 4_2:-53790926 | None:intergenic |
| TTGACAGAAACTTCCTCGAA+CGG | 0.561034 | 4_2:+53793580 | Msa0607100:CDS |
| AAACTGATTATGCCAAGTAC+AGG | 0.561338 | 4_2:+53792619 | Msa0607100:CDS |
| TAGTTCATCAATAACTCAAG+TGG | 0.561751 | 4_2:-53796981 | None:intergenic |
| TAGTTGATGGTTCGACTCAA+CGG | 0.562336 | 4_2:+53793158 | Msa0607100:CDS |
| AAGGTGCTGCTTCCACATCT+GGG | 0.566229 | 4_2:+53794257 | Msa0607100:CDS |
| AGGGAGCAGTTAAGGGCTCA+TGG | 0.566417 | 4_2:+53795574 | Msa0607100:CDS |
| TCCAATATGTGTACAAAATG+CGG | 0.567166 | 4_2:-53795769 | None:intergenic |
| TTGGTGGTTATTTAAGTGGG+TGG | 0.568099 | 4_2:+53796837 | Msa0607100:three_prime_UTR |
| AAGATGCTGCACCCTGCGGA+AGG | 0.570774 | 4_2:+53789140 | Msa0607100:CDS |
| ATCTGGACTACTTTCCCACA+TGG | 0.573721 | 4_2:+53794354 | Msa0607100:CDS |
| TCGTCCCCGGGAGATTCGTA+TGG | 0.574541 | 4_2:+53792411 | Msa0607100:CDS |
| TTCTCCAACAAGCTAAGAAG+AGG | 0.576408 | 4_2:-53793643 | None:intergenic |
| CAAATCTTGAACTCAAAGAA+GGG | 0.576709 | 4_2:+53794715 | Msa0607100:CDS |
| ATCATCAAGATGCTATAGCT+CGG | 0.577630 | 4_2:+53796288 | Msa0607100:CDS |
| TTAGAGGAAGTAAACCATGC+TGG | 0.581177 | 4_2:-53790927 | None:intergenic |
| TCTTTGAGACACTCTAGCAC+TGG | 0.581560 | 4_2:-53794197 | None:intergenic |
| TAATCCATTAACAGCCAAAG+TGG | 0.581848 | 4_2:-53796240 | None:intergenic |
| CTTCGTCCTCCATTCCTCGA+AGG | 0.582239 | 4_2:+53793314 | Msa0607100:CDS |
| AAAGGCCTTGGTACCTGCAG+AGG | 0.584057 | 4_2:-53789606 | None:intergenic |
| CTACAATTGCACGAAAGCAA+TGG | 0.586229 | 4_2:+53789348 | Msa0607100:CDS |
| AGTAAATTTAGTGACCCTCC+AGG | 0.589099 | 4_2:+53789173 | Msa0607100:CDS |
| TCAAGTGTTGGTCAAACAGA+TGG | 0.590516 | 4_2:+53796608 | Msa0607100:CDS |
| CCTATCTGTTGATGTCCTGT+TGG | 0.590986 | 4_2:-53793548 | None:intergenic |
| GAACTCAGACAACAACGTCT+TGG | 0.591585 | 4_2:+53793517 | Msa0607100:CDS |
| ACGCAGAGATGGTCAAGTGT+TGG | 0.591871 | 4_2:+53796596 | Msa0607100:CDS |
| CTGAGATACGATCCCAGATG+TGG | 0.592179 | 4_2:-53794269 | None:intergenic |
| TTGATAGGGGAACGCAGAGA+TGG | 0.592517 | 4_2:+53796585 | Msa0607100:CDS |
| TGAACAAGCACTGCTGAGGA+AGG | 0.594945 | 4_2:+53795702 | Msa0607100:CDS |
| TCAGCTCATTTCCTTCCGCA+GGG | 0.598356 | 4_2:-53789151 | None:intergenic |
| GCATCCAGGGAATCTTCAGC+GGG | 0.599089 | 4_2:+53793433 | Msa0607100:CDS |
| ACCAAAACTCATCCTCAAGA+AGG | 0.601761 | 4_2:-53795618 | None:intergenic |
| ATCTGACCTTCGAGGAATGG+AGG | 0.601887 | 4_2:-53793320 | None:intergenic |
| AGGACCTGGCAAAAGAGTTG+AGG | 0.602684 | 4_2:+53789324 | Msa0607100:CDS |
| ATTGGACAGGCAAATAATGG+TGG | 0.603825 | 4_2:+53789386 | Msa0607100:CDS |
| TTTCCGTCAGACAAACAACA+TGG | 0.611500 | 4_2:+53789218 | Msa0607100:CDS |
| AGATGTTTCTCAACGTGGAA+GGG | 0.612032 | 4_2:+53794156 | Msa0607100:intron |
| GAAACTTCAAAACTTGATAG+GGG | 0.613146 | 4_2:+53796572 | Msa0607100:CDS |
| AATAAGCAAACCAAATAAAG+GGG | 0.613371 | 4_2:-53796753 | None:intergenic |
| CAAATGTTTATAGCTTGCCG+TGG | 0.616905 | 4_2:+53792570 | Msa0607100:CDS |
| TTGGACAGGCAAATAATGGT+GGG | 0.619302 | 4_2:+53789387 | Msa0607100:CDS |
| CCAAGTACGCATCTCCTGGA+GGG | 0.619762 | 4_2:-53789187 | None:intergenic |
| ATCTCGCTATTGATGGCATG+TGG | 0.620373 | 4_2:+53792987 | Msa0607100:CDS |
| AGTTGGTTCATTAAAACCGG+AGG | 0.622554 | 4_2:+53790819 | Msa0607100:CDS |
| GTATGTATATTATTTCGTTG+GGG | 0.624190 | 4_2:+53796700 | Msa0607100:three_prime_UTR |
| ATGTGAAGTGGATGTAGATG+TGG | 0.625164 | 4_2:-53789261 | None:intergenic |
| GATCTCACTAAACTGAGGCA+TGG | 0.626150 | 4_2:+53793259 | Msa0607100:CDS |
| TCAGCCCAAGAAACTGATTG+TGG | 0.626676 | 4_2:+53796533 | Msa0607100:CDS |
| CCATGACAATGATAATAGGA+AGG | 0.627046 | 4_2:+53795678 | Msa0607100:CDS |
| TGATGGAGGAGAAAAGGACC+TGG | 0.627492 | 4_2:+53789310 | Msa0607100:CDS |
| TCATGCATCTCGTAACTCAA+GGG | 0.628312 | 4_2:+53795555 | Msa0607100:CDS |
| AGTTCAACATCAGCTCGAGA+AGG | 0.633718 | 4_2:-53793499 | None:intergenic |
| AGGTTGAACAAGCACTGCTG+AGG | 0.636269 | 4_2:+53795698 | Msa0607100:CDS |
| CCACCAAAACAGGTATTCCA+CGG | 0.637705 | 4_2:-53792587 | None:intergenic |
| AGATTCAAACTCTTCTCTGG+TGG | 0.639020 | 4_2:-53793409 | None:intergenic |
| TTAGAACACCTATCATCACT+CGG | 0.639553 | 4_2:-53789421 | None:intergenic |
| TTCCGTCAGACAAACAACAT+GGG | 0.641743 | 4_2:+53789219 | Msa0607100:CDS |
| AGAAAATCTTCAGCGTGCTG+AGG | 0.642392 | 4_2:+53794674 | Msa0607100:CDS |
| TGCATCCAGGGAATCTTCAG+CGG | 0.645427 | 4_2:+53793432 | Msa0607100:CDS |
| TTAGCATCTATGTCTGTTGG+GGG | 0.647506 | 4_2:+53793127 | Msa0607100:CDS |
| ATGTGATGAACTGCATCAGG+TGG | 0.648812 | 4_2:-53795483 | None:intergenic |
| TCCAAGTACGCATCTCCTGG+AGG | 0.655477 | 4_2:-53789188 | None:intergenic |
| ACTTATGCAAGATAAATAAG+CGG | 0.655926 | 4_2:+53795425 | Msa0607100:CDS |
| ATGGAGGACGAAGAATGGGA+AGG | 0.660735 | 4_2:-53793304 | None:intergenic |
| TCCGTCAGACAAACAACATG+GGG | 0.664645 | 4_2:+53789220 | Msa0607100:CDS |
| CCAGAGAAACGTCCAGATCG+GGG | 0.666341 | 4_2:-53793670 | None:intergenic |
| AATGCATCTATGATTGATGG+AGG | 0.670914 | 4_2:+53789296 | Msa0607100:CDS |
| GGTGTTCTAAATGCTAGACC+AGG | 0.672502 | 4_2:+53794319 | Msa0607100:CDS |
| TGTGATGAACTGCATCAGGT+GGG | 0.676946 | 4_2:-53795482 | None:intergenic |
| ATTGAAAGAGAGAGAAAACG+TGG | 0.677041 | 4_2:+53793459 | Msa0607100:CDS |
| GTCAGACAAACAACATGGGG+AGG | 0.681904 | 4_2:+53789223 | Msa0607100:CDS |
| AGTACCTTCAACAAAATAGG+TGG | 0.684443 | 4_2:-53794529 | None:intergenic |
| AGCATGATCTCACTAAACTG+AGG | 0.695824 | 4_2:+53793254 | Msa0607100:CDS |
| AATGAAGATGCTGCACCCTG+CGG | 0.697340 | 4_2:+53789136 | Msa0607100:exon |
| TGAGCCATGTCGCACAACAG+AGG | 0.705775 | 4_2:-53795535 | None:intergenic |
| CATTCAATGATGAAACCATG+TGG | 0.710502 | 4_2:-53794369 | None:intergenic |
| GCTTCCATACGAATCTCCCG+GGG | 0.719618 | 4_2:-53792415 | None:intergenic |
| ATTCAATGATGAAACCATGT+GGG | 0.724918 | 4_2:-53794368 | None:intergenic |
| GTGATGAACTGCATCAGGTG+GGG | 0.726156 | 4_2:-53795481 | None:intergenic |
| TGTGCAGATGTTTCTCAACG+TGG | 0.729524 | 4_2:+53794151 | Msa0607100:intron |
| TGTATCAGAGATACATCACG+AGG | 0.745464 | 4_2:+53794743 | Msa0607100:CDS |
| GAGCAGTTAAGGGCTCATGG+TGG | 0.751798 | 4_2:+53795577 | Msa0607100:CDS |
| GGATCCAAGATACCAGAACG+TGG | 0.761044 | 4_2:-53793181 | None:intergenic |
| TAGACCTCAATCAAGCAATG+CGG | 0.772466 | 4_2:+53793366 | Msa0607100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCTTCATTATTATTATT+TGG | + | chr4_2:53791301-53791320 | Msa0607100:intron | 10.0% |
| !! | TTAGTTATATAAAAATGAAA+TGG | - | chr4_2:53792184-53792203 | None:intergenic | 10.0% |
| !! | ATATAGAAAATCTATAATTA+AGG | - | chr4_2:53792289-53792308 | None:intergenic | 10.0% |
| !!! | TATTTTTATAAATTTTGCTT+AGG | + | chr4_2:53792647-53792666 | Msa0607100:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGACT+TGG | - | chr4_2:53795247-53795266 | None:intergenic | 10.0% |
| !! | ATAACATAGAAAATTATATT+TGG | - | chr4_2:53796127-53796146 | None:intergenic | 10.0% |
| !! | AAAGTAAAAATAAAAACATT+AGG | - | chr4_2:53796153-53796172 | None:intergenic | 10.0% |
| !!! | TTAGTTTGTATTTTTTGTTA+TGG | + | chr4_2:53789709-53789728 | Msa0607100:intron | 15.0% |
| !!! | AAAATGTATGAACTTTTTAT+GGG | + | chr4_2:53790235-53790254 | Msa0607100:intron | 15.0% |
| !! | TATAATCAAATAGAGATATA+GGG | - | chr4_2:53791202-53791221 | None:intergenic | 15.0% |
| !! | ATATAATCAAATAGAGATAT+AGG | - | chr4_2:53791203-53791222 | None:intergenic | 15.0% |
| !! | AAATTTGTCTAAATAATGTT+AGG | + | chr4_2:53791244-53791263 | Msa0607100:intron | 15.0% |
| !! | AATTTGTCTAAATAATGTTA+GGG | + | chr4_2:53791245-53791264 | Msa0607100:intron | 15.0% |
| !!! | TTATTGATTTATTTCATAGA+AGG | - | chr4_2:53791366-53791385 | None:intergenic | 15.0% |
| !! | TTATCAAATTTGTATATCAT+TGG | + | chr4_2:53791440-53791459 | Msa0607100:intron | 15.0% |
| !! | ATATTTAATGCAAAATTTCT+TGG | + | chr4_2:53792353-53792372 | Msa0607100:intron | 15.0% |
| !!! | AATTTTATGCTTCAAAAATA+AGG | + | chr4_2:53792504-53792523 | Msa0607100:intron | 15.0% |
| !!! | AACTAAATTTTAACAATATC+AGG | - | chr4_2:53794786-53794805 | None:intergenic | 15.0% |
| !! | ATATTGTTAAAATTTAGTTG+TGG | + | chr4_2:53794787-53794806 | Msa0607100:intron | 15.0% |
| !! | TGATATTAGTTAAATAGATA+GGG | - | chr4_2:53795120-53795139 | None:intergenic | 15.0% |
| !! | ATGATATTAGTTAAATAGAT+AGG | - | chr4_2:53795121-53795140 | None:intergenic | 15.0% |
| !!! | TATACTTGTTATAAAATATC+TGG | + | chr4_2:53796347-53796366 | Msa0607100:intron | 15.0% |
| !! | TTACAAACTAATTTACAAAA+CGG | - | chr4_2:53796667-53796686 | None:intergenic | 15.0% |
| !!! | TTTTGTAAATTAGTTTGTAA+TGG | + | chr4_2:53796667-53796686 | Msa0607100:exon | 15.0% |
| !! | ATACACTTGTTCTTAAAAAA+TGG | + | chr4_2:53789765-53789784 | Msa0607100:intron | 20.0% |
| !! | AAAAAAAATCTTCCAAACAT+AGG | - | chr4_2:53789819-53789838 | None:intergenic | 20.0% |
| !! | TCTGAAAACAATTGAAATAA+AGG | - | chr4_2:53790065-53790084 | None:intergenic | 20.0% |
| !!! | TTTTCAGAGTTAAATGTTTT+TGG | + | chr4_2:53790077-53790096 | Msa0607100:intron | 20.0% |
| !!! | CAAAATGTATGAACTTTTTA+TGG | + | chr4_2:53790234-53790253 | Msa0607100:intron | 20.0% |
| !!! | AAATGTATGAACTTTTTATG+GGG | + | chr4_2:53790236-53790255 | Msa0607100:intron | 20.0% |
| !!! | TTTTTTAGTCCAAATAGAAT+TGG | - | chr4_2:53790280-53790299 | None:intergenic | 20.0% |
| !!! | TCACCTAAAAAATTGAATTT+TGG | + | chr4_2:53790443-53790462 | Msa0607100:intron | 20.0% |
| !!! | ATGCCAAAATTCAATTTTTT+AGG | - | chr4_2:53790449-53790468 | None:intergenic | 20.0% |
| !!! | TTTTAAAAAAATTCTCTGCA+TGG | - | chr4_2:53790715-53790734 | None:intergenic | 20.0% |
| !!! | GCAGAGAATTTTTTTAAAAT+TGG | + | chr4_2:53790716-53790735 | Msa0607100:intron | 20.0% |
| !! | ATCTCTATTTGATTATATGT+TGG | + | chr4_2:53791205-53791224 | Msa0607100:intron | 20.0% |
| !!! | TATATAACTAAGTTTTGCAT+TGG | + | chr4_2:53792193-53792212 | Msa0607100:intron | 20.0% |
| !!! | TTTATAAATTTTGCTTAGGT+AGG | + | chr4_2:53792651-53792670 | Msa0607100:intron | 20.0% |
| !!! | AGGATTACATTTTACAATTA+TGG | + | chr4_2:53792671-53792690 | Msa0607100:intron | 20.0% |
| !! | AATATATGCTAAATTCCTAA+AGG | - | chr4_2:53794566-53794585 | None:intergenic | 20.0% |
| !!! | AAATTTTAACAATATCAGGA+AGG | - | chr4_2:53794782-53794801 | None:intergenic | 20.0% |
| !! | GATATTAGTTAAATAGATAG+GGG | - | chr4_2:53795119-53795138 | None:intergenic | 20.0% |
| !! | CAAACAACTAAATACTTAAT+TGG | - | chr4_2:53795848-53795867 | None:intergenic | 20.0% |
| !! | TTAACCTCATAATAAGAAAA+GGG | - | chr4_2:53795940-53795959 | None:intergenic | 20.0% |
| !! | ATTAACCTCATAATAAGAAA+AGG | - | chr4_2:53795941-53795960 | None:intergenic | 20.0% |
| !! | ATTATGAGGTTAATGAATAT+AGG | + | chr4_2:53795947-53795966 | Msa0607100:intron | 20.0% |
| !!! | CAAGTATTTCACATTTTTTA+AGG | + | chr4_2:53795975-53795994 | Msa0607100:intron | 20.0% |
| !!! | ATTTCACATTTTTTAAGGAA+AGG | + | chr4_2:53795980-53795999 | Msa0607100:intron | 20.0% |
| !!! | TATTTTTACTTTCATTCTAC+TGG | + | chr4_2:53796161-53796180 | Msa0607100:intron | 20.0% |
| !!! | ATTTTTACTTTCATTCTACT+GGG | + | chr4_2:53796162-53796181 | Msa0607100:intron | 20.0% |
| !! | ATAATATACATACAGGAAAA+TGG | - | chr4_2:53796693-53796712 | None:intergenic | 20.0% |
| !! | TGTATGTATATTATTTCGTT+GGG | + | chr4_2:53796699-53796718 | Msa0607100:three_prime_UTR | 20.0% |
| !! | AAATAAGCAAACCAAATAAA+GGG | - | chr4_2:53796757-53796776 | None:intergenic | 20.0% |
| !! | AAAATAAGCAAACCAAATAA+AGG | - | chr4_2:53796758-53796777 | None:intergenic | 20.0% |
| !!! | AAAAGTTTTTCTTTACTCTT+TGG | + | chr4_2:53796818-53796837 | Msa0607100:three_prime_UTR | 20.0% |
| !!! | ATGTATATTTTTATGGATAC+AGG | + | chr4_2:53796892-53796911 | Msa0607100:intron | 20.0% |
| !!! | TGTATATTTTTATGGATACA+GGG | + | chr4_2:53796893-53796912 | Msa0607100:intron | 20.0% |
| ! | TGTAATTGATATAGATGGTT+TGG | + | chr4_2:53789451-53789470 | Msa0607100:CDS | 25.0% |
| !!! | TGTATCCTTTTAACTTTTTG+TGG | + | chr4_2:53789530-53789549 | Msa0607100:intron | 25.0% |
| ! | AAATACCTGATAGAAAAATG+AGG | - | chr4_2:53789556-53789575 | None:intergenic | 25.0% |
| !!! | TGTATTTTTTGTTATGGATG+TGG | + | chr4_2:53789715-53789734 | Msa0607100:intron | 25.0% |
| !!! | GTATTTTTTGTTATGGATGT+GGG | + | chr4_2:53789716-53789735 | Msa0607100:intron | 25.0% |
| !! | AACATAGGTTCTAATAAACA+GGG | - | chr4_2:53789804-53789823 | None:intergenic | 25.0% |
| !! | AAACATAGGTTCTAATAAAC+AGG | - | chr4_2:53789805-53789824 | None:intergenic | 25.0% |
| ! | TGTTTATTAGAACCTATGTT+TGG | + | chr4_2:53789804-53789823 | Msa0607100:intron | 25.0% |
| !! | ATCTAATGTATTGATGTGTT+TGG | + | chr4_2:53790036-53790055 | Msa0607100:intron | 25.0% |
| !! | ACTAAAAGCACACAATATTT+GGG | - | chr4_2:53790157-53790176 | None:intergenic | 25.0% |
| !! | AACTAAAAGCACACAATATT+TGG | - | chr4_2:53790158-53790177 | None:intergenic | 25.0% |
| ! | AACGTATTTCCAATTCTATT+TGG | + | chr4_2:53790268-53790287 | Msa0607100:intron | 25.0% |
| !!! | CTAGCAGTCATTTTAATAAA+GGG | - | chr4_2:53790312-53790331 | None:intergenic | 25.0% |
| !!! | ACTAGCAGTCATTTTAATAA+AGG | - | chr4_2:53790313-53790332 | None:intergenic | 25.0% |
| !!! | TAGTTTTTTTTTTCCCTTGA+GGG | + | chr4_2:53790329-53790348 | Msa0607100:intron | 25.0% |
| !!! | AATTCAATTTTTTAGGTGAC+AGG | - | chr4_2:53790442-53790461 | None:intergenic | 25.0% |
| !!! | AAAAAAATCTGAAAGCATCA+AGG | - | chr4_2:53790514-53790533 | None:intergenic | 25.0% |
| !!! | ATTTCAAGTTCCAATTTTTC+AGG | + | chr4_2:53790574-53790593 | Msa0607100:intron | 25.0% |
| ! | AAAAGTTATGCCTGAAAAAT+TGG | - | chr4_2:53790587-53790606 | None:intergenic | 25.0% |
| ! | TCACATACAATAACATTGAT+AGG | - | chr4_2:53790742-53790761 | None:intergenic | 25.0% |
| ! | TATCAATGTTATTGTATGTG+AGG | + | chr4_2:53790741-53790760 | Msa0607100:intron | 25.0% |
| ! | TGTATTTACCATTACATTGT+AGG | + | chr4_2:53790777-53790796 | Msa0607100:intron | 25.0% |
| !! | ATTAGTTGGTTCATTAAAAC+CGG | + | chr4_2:53790816-53790835 | Msa0607100:CDS | 25.0% |
| !! | AGTCAAATAAAGTATCAAGA+TGG | - | chr4_2:53790991-53791010 | None:intergenic | 25.0% |
| ! | TGGAAACATCTTAAATTCAA+TGG | + | chr4_2:53791053-53791072 | Msa0607100:intron | 25.0% |
| ! | TTAAATTCAATGGATGTTTC+AGG | + | chr4_2:53791063-53791082 | Msa0607100:intron | 25.0% |
| ! | GAAATGATCATTTCCTTTAA+AGG | + | chr4_2:53791739-53791758 | Msa0607100:intron | 25.0% |
| !! | CTAAAGCAGGTAAATTTTAA+GGG | - | chr4_2:53791974-53791993 | None:intergenic | 25.0% |
| !!! | TCGTTTCAATTTTTTATCCT+CGG | - | chr4_2:53792261-53792280 | None:intergenic | 25.0% |
| ! | AAAATATTTGAGGACACTTT+AGG | - | chr4_2:53792324-53792343 | None:intergenic | 25.0% |
| !!! | TAAAGTGTCCTCAAATATTT+TGG | + | chr4_2:53792323-53792342 | Msa0607100:intron | 25.0% |
| ! | GAAGCATAAAATTCACATAA+TGG | - | chr4_2:53792497-53792516 | None:intergenic | 25.0% |
| !!! | ATTTATCTGAGGCTATTTTT+GGG | + | chr4_2:53792747-53792766 | Msa0607100:intron | 25.0% |
| ! | GGAAACAAATTATCTGATTT+GGG | + | chr4_2:53792768-53792787 | Msa0607100:intron | 25.0% |
| !! | GAAACAAATTATCTGATTTG+GGG | + | chr4_2:53792769-53792788 | Msa0607100:intron | 25.0% |
| ! | AAGTAGCAAATAGAAAAAAC+AGG | - | chr4_2:53792869-53792888 | None:intergenic | 25.0% |
| ! | ATTACAACAAAACACATACA+TGG | + | chr4_2:53794009-53794028 | Msa0607100:intron | 25.0% |
| ! | ATAAAACAGTGTTTCTTTGT+TGG | - | chr4_2:53794056-53794075 | None:intergenic | 25.0% |
| !! | ACTTTTCCAGATGTTTAATA+GGG | + | chr4_2:53794501-53794520 | Msa0607100:CDS | 25.0% |
| !! | TGAAGATTTTCTAAGCAATT+TGG | - | chr4_2:53794666-53794685 | None:intergenic | 25.0% |
| ! | ATTCAAAACTGAACAGAAAA+TGG | + | chr4_2:53794995-53795014 | Msa0607100:intron | 25.0% |
| ! | ACTTATGCAAGATAAATAAG+CGG | + | chr4_2:53795425-53795444 | Msa0607100:CDS | 25.0% |
| !! | AAATCCCTTTTCTTATTATG+AGG | + | chr4_2:53795933-53795952 | Msa0607100:intron | 25.0% |
| !!! | CATTTTTTAAGGAAAGGAAA+TGG | + | chr4_2:53795986-53796005 | Msa0607100:intron | 25.0% |
| ! | TAATTTACTCAGGCTTATAA+AGG | + | chr4_2:53796313-53796332 | Msa0607100:CDS | 25.0% |
| !! | CTTGTTATAAAATATCTGGT+TGG | + | chr4_2:53796351-53796370 | Msa0607100:intron | 25.0% |
| !!! | AATGTAAGTATAGTTGCTTT+TGG | - | chr4_2:53796473-53796492 | None:intergenic | 25.0% |
| ! | TACATTATCTCAAAATGTTC+TGG | + | chr4_2:53796487-53796506 | Msa0607100:intron | 25.0% |
| !!! | TATCAAGTTTTGAAGTTTCT+CGG | - | chr4_2:53796571-53796590 | None:intergenic | 25.0% |
| ! | AGAAACTTCAAAACTTGATA+GGG | + | chr4_2:53796571-53796590 | Msa0607100:CDS | 25.0% |
| ! | CAACGAAATAATATACATAC+AGG | - | chr4_2:53796700-53796719 | None:intergenic | 25.0% |
| ! | CTGTATGTATATTATTTCGT+TGG | + | chr4_2:53796698-53796717 | Msa0607100:three_prime_UTR | 25.0% |
| ! | GTATGTATATTATTTCGTTG+GGG | + | chr4_2:53796700-53796719 | Msa0607100:three_prime_UTR | 25.0% |
| ! | AATAAGCAAACCAAATAAAG+GGG | - | chr4_2:53796756-53796775 | None:intergenic | 25.0% |
| ! | AGTGAAAAAAAATGTAGCAT+AGG | + | chr4_2:53796792-53796811 | Msa0607100:three_prime_UTR | 25.0% |
| ! | GTGAAAAAAAATGTAGCATA+GGG | + | chr4_2:53796793-53796812 | Msa0607100:three_prime_UTR | 25.0% |
| !!! | GTATATTTTTATGGATACAG+GGG | + | chr4_2:53796894-53796913 | Msa0607100:intron | 25.0% |
| !!! | AGAGAACTGTTTATTTTACT+CGG | + | chr4_2:53796933-53796952 | Msa0607100:three_prime_UTR | 25.0% |
| GACGATGTAATTGATATAGA+TGG | + | chr4_2:53789446-53789465 | Msa0607100:CDS | 30.0% | |
| GTATTTGATGAAAAACTTCC+TGG | + | chr4_2:53789570-53789589 | Msa0607100:CDS | 30.0% | |
| ! | AGTCTGCTCTAATAATTTGT+TGG | + | chr4_2:53789666-53789685 | Msa0607100:intron | 30.0% |
| GTGTATCTTCATTGAATGTA+AGG | + | chr4_2:53789738-53789757 | Msa0607100:intron | 30.0% | |
| GTGTACAATAATCTGACAAA+TGG | + | chr4_2:53789932-53789951 | Msa0607100:intron | 30.0% | |
| !!! | AACATGTTGCTGGTTTTATA+GGG | - | chr4_2:53790104-53790123 | None:intergenic | 30.0% |
| AACTAAAATCAACATGTTGC+TGG | - | chr4_2:53790114-53790133 | None:intergenic | 30.0% | |
| GGGACTAAAAAATACTTTAG+AGG | - | chr4_2:53790137-53790156 | None:intergenic | 30.0% | |
| !!! | CTAGTTTTTTTTTTCCCTTG+AGG | + | chr4_2:53790328-53790347 | Msa0607100:intron | 30.0% |
| !!! | AGTTTTTTTTTTCCCTTGAG+GGG | + | chr4_2:53790330-53790349 | Msa0607100:intron | 30.0% |
| !! | AACTAATTTGCTGAACTCAA+CGG | - | chr4_2:53790803-53790822 | None:intergenic | 30.0% |
| ACAGCTGACAAATAAGTAAT+TGG | + | chr4_2:53791028-53791047 | Msa0607100:intron | 30.0% | |
| CAGCTGACAAATAAGTAATT+GGG | + | chr4_2:53791029-53791048 | Msa0607100:intron | 30.0% | |
| TGACAAATAAGTAATTGGGA+TGG | + | chr4_2:53791033-53791052 | Msa0607100:intron | 30.0% | |
| ! | AAGGAGCATAAAACATACAT+AGG | - | chr4_2:53791178-53791197 | None:intergenic | 30.0% |
| TCAAATAGAGATATAGGGAA+AGG | - | chr4_2:53791197-53791216 | None:intergenic | 30.0% | |
| TTGTCTAAATAATGTTAGGG+AGG | + | chr4_2:53791248-53791267 | Msa0607100:intron | 30.0% | |
| ATTGTCACACTGTTGAATTA+AGG | + | chr4_2:53791400-53791419 | Msa0607100:intron | 30.0% | |
| !! | TTATTGTTTTATGTGTGTGC+TGG | + | chr4_2:53791473-53791492 | Msa0607100:intron | 30.0% |
| AGATTCTATGCTTCCTTTAA+AGG | - | chr4_2:53791755-53791774 | None:intergenic | 30.0% | |
| ACAAAAGATTGTCGCAAAAA+TGG | - | chr4_2:53791802-53791821 | None:intergenic | 30.0% | |
| ACTGTAAACCTAAAAGAAGA+GGG | - | chr4_2:53791826-53791845 | None:intergenic | 30.0% | |
| TCCTTTCCTAAAACATGTAT+TGG | + | chr4_2:53791905-53791924 | Msa0607100:intron | 30.0% | |
| ! | CTATAGCCAATACATGTTTT+AGG | - | chr4_2:53791914-53791933 | None:intergenic | 30.0% |
| TCAAAGCAGATGAAAAATCT+TGG | + | chr4_2:53791939-53791958 | Msa0607100:intron | 30.0% | |
| ! | CCTAAAGCAGGTAAATTTTA+AGG | - | chr4_2:53791975-53791994 | None:intergenic | 30.0% |
| CCTTAAAATTTACCTGCTTT+AGG | + | chr4_2:53791972-53791991 | Msa0607100:intron | 30.0% | |
| TCAATTTAGGAAATACCACT+AGG | - | chr4_2:53792068-53792087 | None:intergenic | 30.0% | |
| TAATGTTAATGCTAGGATTG+TGG | - | chr4_2:53792149-53792168 | None:intergenic | 30.0% | |
| TAGCTGAACCAAAATATTTG+AGG | - | chr4_2:53792334-53792353 | None:intergenic | 30.0% | |
| AAAAATAACTGACCTGTACT+TGG | - | chr4_2:53792634-53792653 | None:intergenic | 30.0% | |
| !! | GATTTATCTGAGGCTATTTT+TGG | + | chr4_2:53792746-53792765 | Msa0607100:intron | 30.0% |
| GGGAAACAAATTATCTGATT+TGG | + | chr4_2:53792767-53792786 | Msa0607100:intron | 30.0% | |
| ATGCGACAAAAATCATTTCT+AGG | - | chr4_2:53793040-53793059 | None:intergenic | 30.0% | |
| !!! | AAGGAGTATTCCATTTTTTG+CGG | - | chr4_2:53793065-53793084 | None:intergenic | 30.0% |
| CAAAAAATGGAATACTCCTT+AGG | + | chr4_2:53793065-53793084 | Msa0607100:CDS | 30.0% | |
| GAAGTGTATTTATAAGCCTA+AGG | - | chr4_2:53793084-53793103 | None:intergenic | 30.0% | |
| !!! | ACCATTTGTTTTATTCTCAG+AGG | - | chr4_2:53793764-53793783 | None:intergenic | 30.0% |
| GAATAAAACAAATGGTGAAC+TGG | + | chr4_2:53793768-53793787 | Msa0607100:CDS | 30.0% | |
| TACAATAGTAAATACCTGAC+TGG | + | chr4_2:53793949-53793968 | Msa0607100:intron | 30.0% | |
| GTAGTTTAGTTAGTTACTGA+GGG | + | chr4_2:53793974-53793993 | Msa0607100:intron | 30.0% | |
| TCATTTCTATGCTTTCTTTG+TGG | + | chr4_2:53794086-53794105 | Msa0607100:intron | 30.0% | |
| CATTTCTATGCTTTCTTTGT+GGG | + | chr4_2:53794087-53794106 | Msa0607100:intron | 30.0% | |
| ATTCAATGATGAAACCATGT+GGG | - | chr4_2:53794371-53794390 | None:intergenic | 30.0% | |
| !! | AAAAGAGTACCTTGAAAAAG+TGG | + | chr4_2:53794402-53794421 | Msa0607100:CDS | 30.0% |
| ! | GACTTTTCCAGATGTTTAAT+AGG | + | chr4_2:53794500-53794519 | Msa0607100:CDS | 30.0% |
| TGTAGTACCTTCAACAAAAT+AGG | - | chr4_2:53794535-53794554 | None:intergenic | 30.0% | |
| TACTACACAACATATCCTTT+AGG | + | chr4_2:53794548-53794567 | Msa0607100:intron | 30.0% | |
| ! | TGCATAGTTTCTAACCATTT+TGG | + | chr4_2:53794590-53794609 | Msa0607100:intron | 30.0% |
| AAAATATGCCAATGCCAAAA+TGG | - | chr4_2:53794607-53794626 | None:intergenic | 30.0% | |
| !!! | TGGCATATTTTTAGATACTG+AGG | + | chr4_2:53794616-53794635 | Msa0607100:intron | 30.0% |
| CAAATCTTGAACTCAAAGAA+GGG | + | chr4_2:53794715-53794734 | Msa0607100:CDS | 30.0% | |
| ! | TATTTCTACACGTGATTGAT+TGG | + | chr4_2:53794852-53794871 | Msa0607100:intron | 30.0% |
| GAGCATAATATTCTTCCTTA+GGG | + | chr4_2:53795017-53795036 | Msa0607100:intron | 30.0% | |
| ACATCGTTCTGTATATTTGA+TGG | - | chr4_2:53795081-53795100 | None:intergenic | 30.0% | |
| TTAGTTAAATAGATAGGGGA+TGG | - | chr4_2:53795115-53795134 | None:intergenic | 30.0% | |
| AAAATTAGCTGGCAACAATT+AGG | - | chr4_2:53795160-53795179 | None:intergenic | 30.0% | |
| ! | TACATAAAGTGTCAAGATAG+GGG | - | chr4_2:53795190-53795209 | None:intergenic | 30.0% |
| ! | GTACATAAAGTGTCAAGATA+GGG | - | chr4_2:53795191-53795210 | None:intergenic | 30.0% |
| GCTAGACTTATAATACTGTT+GGG | - | chr4_2:53795337-53795356 | None:intergenic | 30.0% | |
| TGCTAGACTTATAATACTGT+TGG | - | chr4_2:53795338-53795357 | None:intergenic | 30.0% | |
| ATCTTTCATTTCTCTTTCGT+AGG | + | chr4_2:53795384-53795403 | Msa0607100:intron | 30.0% | |
| CTTCCTATTATCATTGTCAT+GGG | - | chr4_2:53795680-53795699 | None:intergenic | 30.0% | |
| TCCAATATGTGTACAAAATG+CGG | - | chr4_2:53795772-53795791 | None:intergenic | 30.0% | |
| !! | TACGTGATGATTTTCAAGAA+TGG | - | chr4_2:53795796-53795815 | None:intergenic | 30.0% |
| AATTGGACAAATGAAGAGAA+AGG | - | chr4_2:53795831-53795850 | None:intergenic | 30.0% | |
| !! | TAAAGGACTAAAAGCACTAT+AGG | - | chr4_2:53795872-53795891 | None:intergenic | 30.0% |
| !! | TTTAGTTGTTTTGCACTGAT+GGG | + | chr4_2:53795888-53795907 | Msa0607100:intron | 30.0% |
| ! | AGGATAGATAGATATTTTCC+TGG | + | chr4_2:53796022-53796041 | Msa0607100:intron | 30.0% |
| ! | GGATAGATAGATATTTTCCT+GGG | + | chr4_2:53796023-53796042 | Msa0607100:intron | 30.0% |
| ! | GATAGATAGATATTTTCCTG+GGG | + | chr4_2:53796024-53796043 | Msa0607100:intron | 30.0% |
| ! | ATAGATAGATATTTTCCTGG+GGG | + | chr4_2:53796025-53796044 | Msa0607100:intron | 30.0% |
| ATCACATAACAAAGATCTCT+AGG | - | chr4_2:53796093-53796112 | None:intergenic | 30.0% | |
| !!! | ATCAAGTTTTGAAGTTTCTC+GGG | - | chr4_2:53796570-53796589 | None:intergenic | 30.0% |
| GAGAAACTTCAAAACTTGAT+AGG | + | chr4_2:53796570-53796589 | Msa0607100:CDS | 30.0% | |
| GAAACTTCAAAACTTGATAG+GGG | + | chr4_2:53796572-53796591 | Msa0607100:CDS | 30.0% | |
| ATATTATTTCGTTGGGGAAA+AGG | + | chr4_2:53796706-53796725 | Msa0607100:three_prime_UTR | 30.0% | |
| ATAGAAGTTTCCCCTTTATT+TGG | + | chr4_2:53796743-53796762 | Msa0607100:three_prime_UTR | 30.0% | |
| !!! | TTTGCTTATTTTACTGCGTT+TGG | + | chr4_2:53796766-53796785 | Msa0607100:three_prime_UTR | 30.0% |
| ! | AGTTTTTCTTTACTCTTTGG+TGG | + | chr4_2:53796821-53796840 | Msa0607100:three_prime_UTR | 30.0% |
| ! | TCTTTGGTGGTTATTTAAGT+GGG | + | chr4_2:53796834-53796853 | Msa0607100:three_prime_UTR | 30.0% |
| ATCTACATCCACTTCACATA+TGG | + | chr4_2:53789265-53789284 | Msa0607100:CDS | 35.0% | |
| AATGCATCTATGATTGATGG+AGG | + | chr4_2:53789296-53789315 | Msa0607100:CDS | 35.0% | |
| TATGATTGATGGAGGAGAAA+AGG | + | chr4_2:53789304-53789323 | Msa0607100:CDS | 35.0% | |
| TACAATTGCACGAAAGCAAT+GGG | + | chr4_2:53789349-53789368 | Msa0607100:CDS | 35.0% | |
| GAAATTGGACAGGCAAATAA+TGG | + | chr4_2:53789383-53789402 | Msa0607100:CDS | 35.0% | |
| TTAGAACACCTATCATCACT+CGG | - | chr4_2:53789424-53789443 | None:intergenic | 35.0% | |
| TGAGGCCACAAAAAGTTAAA+AGG | - | chr4_2:53789538-53789557 | None:intergenic | 35.0% | |
| ATTAGATCTCACACGAATTG+GGG | - | chr4_2:53790023-53790042 | None:intergenic | 35.0% | |
| CATTAGATCTCACACGAATT+GGG | - | chr4_2:53790024-53790043 | None:intergenic | 35.0% | |
| ACATTAGATCTCACACGAAT+TGG | - | chr4_2:53790025-53790044 | None:intergenic | 35.0% | |
| !!! | ACATGTTGCTGGTTTTATAG+GGG | - | chr4_2:53790103-53790122 | None:intergenic | 35.0% |
| !!! | CAACATGTTGCTGGTTTTAT+AGG | - | chr4_2:53790105-53790124 | None:intergenic | 35.0% |
| !!! | GAGTTGTGTGTTTTTTGTCT+AGG | + | chr4_2:53790369-53790388 | Msa0607100:intron | 35.0% |
| ACACTATTGAGTTCAAGTGT+TGG | - | chr4_2:53790485-53790504 | None:intergenic | 35.0% | |
| AGATGGTTGTTAAACATCTG+AGG | - | chr4_2:53790672-53790691 | None:intergenic | 35.0% | |
| CATGTTTCACATACAGAAGA+TGG | - | chr4_2:53790689-53790708 | None:intergenic | 35.0% | |
| GTTGAGTTCAGCAAATTAGT+TGG | + | chr4_2:53790802-53790821 | Msa0607100:CDS | 35.0% | |
| !!! | ATTGTTTTTGTTACCCAGCA+TGG | + | chr4_2:53790913-53790932 | Msa0607100:CDS | 35.0% |
| CAAGAAAATGCTTGTCTTGT+TGG | + | chr4_2:53791142-53791161 | Msa0607100:CDS | 35.0% | |
| ! | AAATGCTTGTCTTGTTGGAT+TGG | + | chr4_2:53791147-53791166 | Msa0607100:CDS | 35.0% |
| AAAATAGCGTTCTACTTGGT+CGG | - | chr4_2:53791706-53791725 | None:intergenic | 35.0% | |
| TTCCAAAATAGCGTTCTACT+TGG | - | chr4_2:53791710-53791729 | None:intergenic | 35.0% | |
| ! | CTTTTGTTCCCTCTTCTTTT+AGG | + | chr4_2:53791815-53791834 | Msa0607100:intron | 35.0% |
| GACTGTAAACCTAAAAGAAG+AGG | - | chr4_2:53791827-53791846 | None:intergenic | 35.0% | |
| !!! | GCCAATACATGTTTTAGGAA+AGG | - | chr4_2:53791909-53791928 | None:intergenic | 35.0% |
| !! | TTTTTCAATGAGGCCTCTAA+AGG | - | chr4_2:53792037-53792056 | None:intergenic | 35.0% |
| GGATTAAGAAGGCTCAATTT+AGG | - | chr4_2:53792081-53792100 | None:intergenic | 35.0% | |
| CAAGACACCTTTAATGTGAT+CGG | - | chr4_2:53792124-53792143 | None:intergenic | 35.0% | |
| AGACGCATAATGTTAATGCT+AGG | - | chr4_2:53792156-53792175 | None:intergenic | 35.0% | |
| AAACTGATTATGCCAAGTAC+AGG | + | chr4_2:53792619-53792638 | Msa0607100:CDS | 35.0% | |
| ! | AATTATGGTTTGCAGTGCTA+TGG | + | chr4_2:53792686-53792705 | Msa0607100:intron | 35.0% |
| AAATGGCATGGATTTATCTG+AGG | + | chr4_2:53792736-53792755 | Msa0607100:intron | 35.0% | |
| GGTCATCTTAAAACCACATA+AGG | + | chr4_2:53792790-53792809 | Msa0607100:intron | 35.0% | |
| ! | GATGAAAAAAGAGCCTTATG+TGG | - | chr4_2:53792806-53792825 | None:intergenic | 35.0% |
| GATTAGCATCTATGTCTGTT+GGG | + | chr4_2:53793125-53793144 | Msa0607100:CDS | 35.0% | |
| ATTAGCATCTATGTCTGTTG+GGG | + | chr4_2:53793126-53793145 | Msa0607100:CDS | 35.0% | |
| !!! | GATCCTACACATCCTTTTTT+CGG | + | chr4_2:53793199-53793218 | Msa0607100:CDS | 35.0% |
| GTCAGATTCTAACTACCAAA+TGG | + | chr4_2:53793336-53793355 | Msa0607100:CDS | 35.0% | |
| ATTGAAAGAGAGAGAAAACG+TGG | + | chr4_2:53793459-53793478 | Msa0607100:CDS | 35.0% | |
| ! | GCCTCTGAGAATAAAACAAA+TGG | + | chr4_2:53793760-53793779 | Msa0607100:CDS | 35.0% |
| ACTGTCATCAGAATTGTAAC+AGG | - | chr4_2:53793881-53793900 | None:intergenic | 35.0% | |
| AATAGTAAATACCTGACTGG+AGG | + | chr4_2:53793952-53793971 | Msa0607100:intron | 35.0% | |
| GGTAGTTTAGTTAGTTACTG+AGG | + | chr4_2:53793973-53793992 | Msa0607100:intron | 35.0% | |
| CCAAAAGTCCCTAATTTCTT+GGG | - | chr4_2:53794229-53794248 | None:intergenic | 35.0% | |
| ACCAAAAGTCCCTAATTTCT+TGG | - | chr4_2:53794230-53794249 | None:intergenic | 35.0% | |
| CATTCAATGATGAAACCATG+TGG | - | chr4_2:53794372-53794391 | None:intergenic | 35.0% | |
| GTTCTACCCTATTAAACATC+TGG | - | chr4_2:53794510-53794529 | None:intergenic | 35.0% | |
| ! | AGAACCACCTATTTTGTTGA+AGG | + | chr4_2:53794525-53794544 | Msa0607100:CDS | 35.0% |
| AGTACCTTCAACAAAATAGG+TGG | - | chr4_2:53794532-53794551 | None:intergenic | 35.0% | |
| AATGGTTAGAAACTATGCAG+TGG | - | chr4_2:53794589-53794608 | None:intergenic | 35.0% | |
| !! | GTTTCTAACCATTTTGGCAT+TGG | + | chr4_2:53794596-53794615 | Msa0607100:intron | 35.0% |
| ! | CCTTCTTTGAGTTCAAGATT+TGG | - | chr4_2:53794717-53794736 | None:intergenic | 35.0% |
| CCAAATCTTGAACTCAAAGA+AGG | + | chr4_2:53794714-53794733 | Msa0607100:CDS | 35.0% | |
| GGAGCATAATATTCTTCCTT+AGG | + | chr4_2:53795016-53795035 | Msa0607100:intron | 35.0% | |
| ! | GGTACATAAAGTGTCAAGAT+AGG | - | chr4_2:53795192-53795211 | None:intergenic | 35.0% |
| GTAGTACTAGTGAGTAAACA+TGG | - | chr4_2:53795213-53795232 | None:intergenic | 35.0% | |
| AGTTGTCATGTAGTAACTAC+AGG | + | chr4_2:53795269-53795288 | Msa0607100:intron | 35.0% | |
| GTTGTCATGTAGTAACTACA+GGG | + | chr4_2:53795270-53795289 | Msa0607100:intron | 35.0% | |
| ! | ATAAGTTGAACAATGCGTTC+AGG | - | chr4_2:53795411-53795430 | None:intergenic | 35.0% |
| TGTCTATTTGAACCTTCTTG+AGG | + | chr4_2:53795606-53795625 | Msa0607100:CDS | 35.0% | |
| TAGCCCATGACAATGATAAT+AGG | + | chr4_2:53795674-53795693 | Msa0607100:CDS | 35.0% | |
| CCTTCCTATTATCATTGTCA+TGG | - | chr4_2:53795681-53795700 | None:intergenic | 35.0% | |
| CCATGACAATGATAATAGGA+AGG | + | chr4_2:53795678-53795697 | Msa0607100:CDS | 35.0% | |
| CATCAGTGCAAAACAACTAA+AGG | - | chr4_2:53795889-53795908 | None:intergenic | 35.0% | |
| !! | CTTTAGTTGTTTTGCACTGA+TGG | + | chr4_2:53795887-53795906 | Msa0607100:intron | 35.0% |
| !! | GAAATGGATTACAAGTGAGA+AGG | + | chr4_2:53796002-53796021 | Msa0607100:intron | 35.0% |
| ! | TAGATAGATATTTTCCTGGG+GGG | + | chr4_2:53796026-53796045 | Msa0607100:intron | 35.0% |
| CATATTTCAGAAAATCTGCC+CGG | + | chr4_2:53796210-53796229 | Msa0607100:intron | 35.0% | |
| AATACCACTTTGGCTGTTAA+TGG | + | chr4_2:53796236-53796255 | Msa0607100:CDS | 35.0% | |
| TAATCCATTAACAGCCAAAG+TGG | - | chr4_2:53796243-53796262 | None:intergenic | 35.0% | |
| ATCATCAAGATGCTATAGCT+CGG | + | chr4_2:53796288-53796307 | Msa0607100:CDS | 35.0% | |
| ! | GGTTGGTACTAAAGTTTATC+AGG | + | chr4_2:53796368-53796387 | Msa0607100:intron | 35.0% |
| TATCCCAAATCCTGTATGAA+TGG | + | chr4_2:53796412-53796431 | Msa0607100:intron | 35.0% | |
| GTTCCATTCATACAGGATTT+GGG | - | chr4_2:53796418-53796437 | None:intergenic | 35.0% | |
| TGTTCCATTCATACAGGATT+TGG | - | chr4_2:53796419-53796438 | None:intergenic | 35.0% | |
| CATGCAAGTTTGTGTTTGAA+CGG | + | chr4_2:53796437-53796456 | Msa0607100:intron | 35.0% | |
| TTATCTCAAAATGTTCTGGC+AGG | + | chr4_2:53796491-53796510 | Msa0607100:intron | 35.0% | |
| TTCTCCACAATCAGTTTCTT+GGG | - | chr4_2:53796540-53796559 | None:intergenic | 35.0% | |
| ! | CTCTTTGGTGGTTATTTAAG+TGG | + | chr4_2:53796833-53796852 | Msa0607100:three_prime_UTR | 35.0% |
| ! | TTATGGATACAGGGGTATAA+AGG | + | chr4_2:53796902-53796921 | Msa0607100:intron | 35.0% |
| AGTAAATTTAGTGACCCTCC+AGG | + | chr4_2:53789173-53789192 | Msa0607100:CDS | 40.0% | |
| TTTCCGTCAGACAAACAACA+TGG | + | chr4_2:53789218-53789237 | Msa0607100:CDS | 40.0% | |
| TTCCGTCAGACAAACAACAT+GGG | + | chr4_2:53789219-53789238 | Msa0607100:CDS | 40.0% | |
| ATGTGAAGTGGATGTAGATG+TGG | - | chr4_2:53789264-53789283 | None:intergenic | 40.0% | |
| TCCACTTCACATATGGCAAA+AGG | + | chr4_2:53789272-53789291 | Msa0607100:CDS | 40.0% | |
| GGCAATGCATCTATGATTGA+TGG | + | chr4_2:53789293-53789312 | Msa0607100:CDS | 40.0% | |
| CTACAATTGCACGAAAGCAA+TGG | + | chr4_2:53789348-53789367 | Msa0607100:CDS | 40.0% | |
| TGGGAGAAAGAGAGTGAAAT+TGG | + | chr4_2:53789368-53789387 | Msa0607100:CDS | 40.0% | |
| GAAAGAGAGTGAAATTGGAC+AGG | + | chr4_2:53789373-53789392 | Msa0607100:CDS | 40.0% | |
| ATTGGACAGGCAAATAATGG+TGG | + | chr4_2:53789386-53789405 | Msa0607100:CDS | 40.0% | |
| TTGGACAGGCAAATAATGGT+GGG | + | chr4_2:53789387-53789406 | Msa0607100:CDS | 40.0% | |
| !! | CTATCATCACTCGGTGTAAA+AGG | - | chr4_2:53789415-53789434 | None:intergenic | 40.0% |
| ! | CTTTTACACCGAGTGATGAT+AGG | + | chr4_2:53789413-53789432 | Msa0607100:CDS | 40.0% |
| !! | TGTGGCCTCATTTTTCTATC+AGG | + | chr4_2:53789548-53789567 | Msa0607100:intron | 40.0% |
| GATAGGTGTATGTTATGCTG+AGG | - | chr4_2:53789640-53789659 | None:intergenic | 40.0% | |
| TAGAGCAGACTACATGAGAT+AGG | - | chr4_2:53789657-53789676 | None:intergenic | 40.0% | |
| CATGTACTAAACCATACCCA+TGG | - | chr4_2:53789881-53789900 | None:intergenic | 40.0% | |
| CATGGGTATGGTTTAGTACA+TGG | + | chr4_2:53789879-53789898 | Msa0607100:intron | 40.0% | |
| TGAGGCATACATCACATCTT+TGG | + | chr4_2:53789910-53789929 | Msa0607100:intron | 40.0% | |
| ATCTGACAAATGGAAGAGAG+TGG | + | chr4_2:53789942-53789961 | Msa0607100:intron | 40.0% | |
| AAATGGAAGAGAGTGGTAGA+GGG | + | chr4_2:53789949-53789968 | Msa0607100:intron | 40.0% | |
| CACGAATTGGGGACAATATA+TGG | - | chr4_2:53790012-53790031 | None:intergenic | 40.0% | |
| ! | AGTTCCTGACAAGAGAGTAT+TGG | + | chr4_2:53790174-53790193 | Msa0607100:intron | 40.0% |
| !! | GTTCCTGACAAGAGAGTATT+GGG | + | chr4_2:53790175-53790194 | Msa0607100:intron | 40.0% |
| !! | TTCCTGACAAGAGAGTATTG+GGG | + | chr4_2:53790176-53790195 | Msa0607100:intron | 40.0% |
| AGAATTGTTAGACCCCTCAA+GGG | - | chr4_2:53790345-53790364 | None:intergenic | 40.0% | |
| ! | AACATCTGAGGCTAAAGTGA+GGG | - | chr4_2:53790660-53790679 | None:intergenic | 40.0% |
| ! | AAACATCTGAGGCTAAAGTG+AGG | - | chr4_2:53790661-53790680 | None:intergenic | 40.0% |
| ! | AGTTGGTTCATTAAAACCGG+AGG | + | chr4_2:53790819-53790838 | Msa0607100:CDS | 40.0% |
| TCTGCTTGTCAGAAACTCAT+TGG | + | chr4_2:53790862-53790881 | Msa0607100:CDS | 40.0% | |
| TAGAGGAAGTAAACCATGCT+GGG | - | chr4_2:53790929-53790948 | None:intergenic | 40.0% | |
| TTAGAGGAAGTAAACCATGC+TGG | - | chr4_2:53790930-53790949 | None:intergenic | 40.0% | |
| ACTTCTAGCAAGTCAGTTAG+AGG | - | chr4_2:53790946-53790965 | None:intergenic | 40.0% | |
| ATAATGTTAGGGAGGCTCAT+TGG | + | chr4_2:53791256-53791275 | Msa0607100:intron | 40.0% | |
| ! | AGGCTCATTGGTCTAATTGT+TGG | + | chr4_2:53791268-53791287 | Msa0607100:intron | 40.0% |
| ATGACAGTGCTGTAATCTTG+AGG | + | chr4_2:53791326-53791345 | Msa0607100:intron | 40.0% | |
| AGCAATCTTCTGCATGATCA+AGG | + | chr4_2:53791504-53791523 | Msa0607100:intron | 40.0% | |
| TTCTGCATGATCAAGGTTCT+GGG | + | chr4_2:53791511-53791530 | Msa0607100:intron | 40.0% | |
| !! | ATGATCAAGGTTCTGGGTTT+GGG | + | chr4_2:53791517-53791536 | Msa0607100:intron | 40.0% |
| GCAATCTTCTTGCATGATCA+AGG | + | chr4_2:53791629-53791648 | Msa0607100:intron | 40.0% | |
| TTCTTGCATGATCAAGGTTC+TGG | + | chr4_2:53791635-53791654 | Msa0607100:intron | 40.0% | |
| TCTTGCATGATCAAGGTTCT+GGG | + | chr4_2:53791636-53791655 | Msa0607100:intron | 40.0% | |
| !! | TCAAGGTTCTGGGTTTGATT+TGG | + | chr4_2:53791646-53791665 | Msa0607100:intron | 40.0% |
| CGGTTATGCAATCAAACCAA+AGG | - | chr4_2:53791686-53791705 | None:intergenic | 40.0% | |
| ! | GACCAAGTAGAACGCTATTT+TGG | + | chr4_2:53791705-53791724 | Msa0607100:intron | 40.0% |
| !! | GAGACAACATGCTCTAAAGT+AGG | - | chr4_2:53791858-53791877 | None:intergenic | 40.0% |
| GAGGCTTTACATCAGGTATA+TGG | - | chr4_2:53791998-53792017 | None:intergenic | 40.0% | |
| GACTTATGAGGCTTTACATC+AGG | - | chr4_2:53792005-53792024 | None:intergenic | 40.0% | |
| !! | GGAGCAAGGATTTTTCAATG+AGG | - | chr4_2:53792047-53792066 | None:intergenic | 40.0% |
| TGAAAAATCCTTGCTCCTAG+TGG | + | chr4_2:53792050-53792069 | Msa0607100:intron | 40.0% | |
| !! | ACCTTTTGGGAGGATTAAGA+AGG | - | chr4_2:53792092-53792111 | None:intergenic | 40.0% |
| !! | GTAAGCACCGATCACATTAA+AGG | + | chr4_2:53792114-53792133 | Msa0607100:intron | 40.0% |
| CAATCCTGGATAAAAGGAGA+GGG | - | chr4_2:53792235-53792254 | None:intergenic | 40.0% | |
| TCAATCCTGGATAAAAGGAG+AGG | - | chr4_2:53792236-53792255 | None:intergenic | 40.0% | |
| ! | CAAATGTTTATAGCTTGCCG+TGG | + | chr4_2:53792570-53792589 | Msa0607100:CDS | 40.0% |
| TCAAGAAATCCCACCAAAAC+AGG | - | chr4_2:53792600-53792619 | None:intergenic | 40.0% | |
| ATGGTTCATCTCGCTATTGA+TGG | + | chr4_2:53792980-53792999 | Msa0607100:CDS | 40.0% | |
| CGATTAGCATCTATGTCTGT+TGG | + | chr4_2:53793124-53793143 | Msa0607100:CDS | 40.0% | |
| TTAGCATCTATGTCTGTTGG+GGG | + | chr4_2:53793127-53793146 | Msa0607100:CDS | 40.0% | |
| !! | TAGTTGATGGTTCGACTCAA+CGG | + | chr4_2:53793158-53793177 | Msa0607100:CDS | 40.0% |
| TGACCGAAAAAAGGATGTGT+AGG | - | chr4_2:53793205-53793224 | None:intergenic | 40.0% | |
| !!! | TCCTTTTTTCGGTCAGAATG+AGG | + | chr4_2:53793210-53793229 | Msa0607100:CDS | 40.0% |
| AGCATGATCTCACTAAACTG+AGG | + | chr4_2:53793254-53793273 | Msa0607100:CDS | 40.0% | |
| TAGTTAGAATCTGACCTTCG+AGG | - | chr4_2:53793331-53793350 | None:intergenic | 40.0% | |
| GAGGTCTATCAACATCCATT+TGG | - | chr4_2:53793354-53793373 | None:intergenic | 40.0% | |
| TAGACCTCAATCAAGCAATG+CGG | + | chr4_2:53793366-53793385 | Msa0607100:CDS | 40.0% | |
| AGATTCAAACTCTTCTCTGG+TGG | - | chr4_2:53793412-53793431 | None:intergenic | 40.0% | |
| GCAAGATTCAAACTCTTCTC+TGG | - | chr4_2:53793415-53793434 | None:intergenic | 40.0% | |
| AGAGTTTGAATCTTGCATCC+AGG | + | chr4_2:53793419-53793438 | Msa0607100:CDS | 40.0% | |
| GAGTTTGAATCTTGCATCCA+GGG | + | chr4_2:53793420-53793439 | Msa0607100:CDS | 40.0% | |
| TTGACAGAAACTTCCTCGAA+CGG | + | chr4_2:53793580-53793599 | Msa0607100:CDS | 40.0% | |
| TTCTCCAACAAGCTAAGAAG+AGG | - | chr4_2:53793646-53793665 | None:intergenic | 40.0% | |
| ! | TGGTGAACTGGACTTTTTGA+TGG | + | chr4_2:53793780-53793799 | Msa0607100:CDS | 40.0% |
| !! | TTTTTGATGGCAGAATTCGC+AGG | + | chr4_2:53793793-53793812 | Msa0607100:CDS | 40.0% |
| TAACTAAACTACCTCCAGTC+AGG | - | chr4_2:53793966-53793985 | None:intergenic | 40.0% | |
| AGATGTTTCTCAACGTGGAA+GGG | + | chr4_2:53794156-53794175 | Msa0607100:intron | 40.0% | |
| ! | CCCAAGAAATTAGGGACTTT+TGG | + | chr4_2:53794226-53794245 | Msa0607100:CDS | 40.0% |
| !!! | GAAGATCTGCCACTTTTTCA+AGG | - | chr4_2:53794414-53794433 | None:intergenic | 40.0% |
| AAAGTCTACTGAGCAAGCTT+TGG | - | chr4_2:53794486-53794505 | None:intergenic | 40.0% | |
| AGCAATTTGGATCAGTTGAC+AGG | - | chr4_2:53794653-53794672 | None:intergenic | 40.0% | |
| TGTATCAGAGATACATCACG+AGG | + | chr4_2:53794743-53794762 | Msa0607100:CDS | 40.0% | |
| TACACGTGATTGATTGGTAG+TGG | + | chr4_2:53794858-53794877 | Msa0607100:intron | 40.0% | |
| !! | ATTGATTGGTAGTGGACTAG+TGG | + | chr4_2:53794866-53794885 | Msa0607100:intron | 40.0% |
| ! | TTTGATGGCATGTGTGTGAA+AGG | - | chr4_2:53795066-53795085 | None:intergenic | 40.0% |
| ATAGATAGGGGATGGAAAGA+TGG | - | chr4_2:53795107-53795126 | None:intergenic | 40.0% | |
| TCTAGCATGTTCTAGCATTG+CGG | + | chr4_2:53795351-53795370 | Msa0607100:intron | 40.0% | |
| CAAGATAAATAAGCGGAGAC+AGG | + | chr4_2:53795432-53795451 | Msa0607100:CDS | 40.0% | |
| ! | GTGGGGAATGATTCCATTTT+CGG | - | chr4_2:53795467-53795486 | None:intergenic | 40.0% |
| TTGATGTGATGAACTGCATC+AGG | - | chr4_2:53795489-53795508 | None:intergenic | 40.0% | |
| TCATGCATCTCGTAACTCAA+GGG | + | chr4_2:53795555-53795574 | Msa0607100:CDS | 40.0% | |
| TAACTCAAGGGAGCAGTTAA+GGG | + | chr4_2:53795567-53795586 | Msa0607100:CDS | 40.0% | |
| ! | ACCTTCTTGAGGATGAGTTT+TGG | + | chr4_2:53795617-53795636 | Msa0607100:CDS | 40.0% |
| ACCAAAACTCATCCTCAAGA+AGG | - | chr4_2:53795621-53795640 | None:intergenic | 40.0% | |
| ! | GCCGCATTTTGTACACATAT+TGG | + | chr4_2:53795768-53795787 | Msa0607100:CDS | 40.0% |
| ! | AGATAGATATTTTCCTGGGG+GGG | + | chr4_2:53796027-53796046 | Msa0607100:intron | 40.0% |
| !!! | CGGGCAGATTTTCTGAAATA+TGG | - | chr4_2:53796212-53796231 | None:intergenic | 40.0% |
| TAACTCCATTACTCGTTGCA+AGG | + | chr4_2:53796261-53796280 | Msa0607100:CDS | 40.0% | |
| TAGCTCGGCTTAATTTACTC+AGG | + | chr4_2:53796303-53796322 | Msa0607100:CDS | 40.0% | |
| CTTGCATGTTCCATTCATAC+AGG | - | chr4_2:53796425-53796444 | None:intergenic | 40.0% | |
| GTTCTCCACAATCAGTTTCT+TGG | - | chr4_2:53796541-53796560 | None:intergenic | 40.0% | |
| !! | TCAAGTGTTGGTCAAACAGA+TGG | + | chr4_2:53796608-53796627 | Msa0607100:CDS | 40.0% |
| ! | TTGGTGGTTATTTAAGTGGG+TGG | + | chr4_2:53796837-53796856 | Msa0607100:three_prime_UTR | 40.0% |
| ! | GGCTGATTTCTTATGCTCAA+TGG | + | chr4_2:53796858-53796877 | Msa0607100:three_prime_UTR | 40.0% |
| TCCGTCAGACAAACAACATG+GGG | + | chr4_2:53789220-53789239 | Msa0607100:CDS | 45.0% | |
| ! | TCCCCATGTTGTTTGTCTGA+CGG | - | chr4_2:53789224-53789243 | None:intergenic | 45.0% |
| ! | GCCTTTTGCCATATGTGAAG+TGG | - | chr4_2:53789276-53789295 | None:intergenic | 45.0% |
| AGAGGAAAAAGGTTCTCTCC+AGG | - | chr4_2:53789591-53789610 | None:intergenic | 45.0% | |
| ! | AGAGAACCTTTTTCCTCTGC+AGG | + | chr4_2:53789593-53789612 | Msa0607100:CDS | 45.0% |
| TTGGTACCTGCAGAGGAAAA+AGG | - | chr4_2:53789602-53789621 | None:intergenic | 45.0% | |
| ! | TTTTTCCTCTGCAGGTACCA+AGG | + | chr4_2:53789601-53789620 | Msa0607100:intron | 45.0% |
| TATGCTGAGGACAGAGGAAA+AGG | - | chr4_2:53789627-53789646 | None:intergenic | 45.0% | |
| GTATGTTATGCTGAGGACAG+AGG | - | chr4_2:53789633-53789652 | None:intergenic | 45.0% | |
| TAGTACATGGTCGTCTTGTG+AGG | + | chr4_2:53789892-53789911 | Msa0607100:intron | 45.0% | |
| CAAATGGAAGAGAGTGGTAG+AGG | + | chr4_2:53789948-53789967 | Msa0607100:intron | 45.0% | |
| !! | TCCTGACAAGAGAGTATTGG+GGG | + | chr4_2:53790177-53790196 | Msa0607100:intron | 45.0% |
| CAGAATTGTTAGACCCCTCA+AGG | - | chr4_2:53790346-53790365 | None:intergenic | 45.0% | |
| ! | ACATCTGAGGCTAAAGTGAG+GGG | - | chr4_2:53790659-53790678 | None:intergenic | 45.0% |
| CTCAACGGCCTACAATGTAA+TGG | - | chr4_2:53790788-53790807 | None:intergenic | 45.0% | |
| ATCACGTCTTCTGATTCCTC+CGG | - | chr4_2:53790838-53790857 | None:intergenic | 45.0% | |
| ! | GGACAGCATACACGTGTTTT+AGG | - | chr4_2:53790970-53790989 | None:intergenic | 45.0% |
| CTTCTGCATGATCAAGGTTC+TGG | + | chr4_2:53791510-53791529 | Msa0607100:intron | 45.0% | |
| !! | CATGATCAAGGTTCTGGGTT+TGG | + | chr4_2:53791516-53791535 | Msa0607100:intron | 45.0% |
| !! | GGTTCTGGGTTTGGGAATTA+AGG | + | chr4_2:53791525-53791544 | Msa0607100:intron | 45.0% |
| !! | AGGTTCTGGGTTTGATTTGG+TGG | + | chr4_2:53791649-53791668 | Msa0607100:intron | 45.0% |
| !! | GGTTCTGGGTTTGATTTGGT+GGG | + | chr4_2:53791650-53791669 | Msa0607100:intron | 45.0% |
| GGTGGGTCAAATTGTACCTT+TGG | + | chr4_2:53791667-53791686 | Msa0607100:intron | 45.0% | |
| TCAGGTATATGGCCTAAAGC+AGG | - | chr4_2:53791987-53792006 | None:intergenic | 45.0% | |
| AGGTTACGTCACGACTTATG+AGG | - | chr4_2:53792017-53792036 | None:intergenic | 45.0% | |
| AGTCGTGACGTAACCTTTAG+AGG | + | chr4_2:53792021-53792040 | Msa0607100:intron | 45.0% | |
| AGGAAATACCACTAGGAGCA+AGG | - | chr4_2:53792061-53792080 | None:intergenic | 45.0% | |
| GCCTTCTTAATCCTCCCAAA+AGG | + | chr4_2:53792088-53792107 | Msa0607100:intron | 45.0% | |
| !! | TCGGTGCTTACACACCTTTT+GGG | - | chr4_2:53792105-53792124 | None:intergenic | 45.0% |
| !! | ATCGGTGCTTACACACCTTT+TGG | - | chr4_2:53792106-53792125 | None:intergenic | 45.0% |
| ! | ACAACCCTCTCCTTTTATCC+AGG | + | chr4_2:53792228-53792247 | Msa0607100:intron | 45.0% |
| CGGTCTCAATCCTGGATAAA+AGG | - | chr4_2:53792241-53792260 | None:intergenic | 45.0% | |
| TTTATCCAGGATTGAGACCG+AGG | + | chr4_2:53792241-53792260 | Msa0607100:intron | 45.0% | |
| TTTATCCTCGGTCTCAATCC+TGG | - | chr4_2:53792249-53792268 | None:intergenic | 45.0% | |
| ! | TACAGCAGCTTTGTCAGTCA+AGG | + | chr4_2:53792449-53792468 | Msa0607100:CDS | 45.0% |
| ! | TTGCCGTGGAATACCTGTTT+TGG | + | chr4_2:53792584-53792603 | Msa0607100:CDS | 45.0% |
| CCACCAAAACAGGTATTCCA+CGG | - | chr4_2:53792590-53792609 | None:intergenic | 45.0% | |
| !!! | CGTGGAATACCTGTTTTGGT+GGG | + | chr4_2:53792588-53792607 | Msa0607100:CDS | 45.0% |
| GCTATGGTTATGCCTAGATG+TGG | + | chr4_2:53792702-53792721 | Msa0607100:intron | 45.0% | |
| ATGTGGCGTTGCAACAGAAA+TGG | + | chr4_2:53792719-53792738 | Msa0607100:intron | 45.0% | |
| TCTGACTCAACTTCTGTCTC+AGG | + | chr4_2:53792954-53792973 | Msa0607100:intron | 45.0% | |
| CTGACTCAACTTCTGTCTCA+GGG | + | chr4_2:53792955-53792974 | Msa0607100:intron | 45.0% | |
| CAACTTCTGTCTCAGGGAAA+TGG | + | chr4_2:53792961-53792980 | Msa0607100:intron | 45.0% | |
| ! | ATCTCGCTATTGATGGCATG+TGG | + | chr4_2:53792987-53793006 | Msa0607100:CDS | 45.0% |
| TGTCGCATAGCCGCAAAAAA+TGG | + | chr4_2:53793052-53793071 | Msa0607100:CDS | 45.0% | |
| !!! | GGGGGTGGATTTTTAGTTGA+TGG | + | chr4_2:53793145-53793164 | Msa0607100:CDS | 45.0% |
| GCCTCATTCTGACCGAAAAA+AGG | - | chr4_2:53793214-53793233 | None:intergenic | 45.0% | |
| GATCTCACTAAACTGAGGCA+TGG | + | chr4_2:53793259-53793278 | Msa0607100:CDS | 45.0% | |
| AGGAATGGAGGACGAAGAAT+GGG | - | chr4_2:53793311-53793330 | None:intergenic | 45.0% | |
| AGAATCTGACCTTCGAGGAA+TGG | - | chr4_2:53793326-53793345 | None:intergenic | 45.0% | |
| AGAGAGAAAACGTGGATCGT+TGG | + | chr4_2:53793467-53793486 | Msa0607100:CDS | 45.0% | |
| AGTTCAACATCAGCTCGAGA+AGG | - | chr4_2:53793502-53793521 | None:intergenic | 45.0% | |
| GAACTCAGACAACAACGTCT+TGG | + | chr4_2:53793517-53793536 | Msa0607100:CDS | 45.0% | |
| ATCTGTTGATGTCCTGTTGG+CGG | - | chr4_2:53793548-53793567 | None:intergenic | 45.0% | |
| CCTATCTGTTGATGTCCTGT+TGG | - | chr4_2:53793551-53793570 | None:intergenic | 45.0% | |
| CCAACAGGACATCAACAGAT+AGG | + | chr4_2:53793548-53793567 | Msa0607100:CDS | 45.0% | |
| TGACAGAAACTTCCTCGAAC+GGG | + | chr4_2:53793581-53793600 | Msa0607100:CDS | 45.0% | |
| CTACTCAGCAAGAGCAAGTT+AGG | + | chr4_2:53793620-53793639 | Msa0607100:CDS | 45.0% | |
| !! | TAGGCCTCTTCTTAGCTTGT+TGG | + | chr4_2:53793639-53793658 | Msa0607100:CDS | 45.0% |
| TGTGCAGATGTTTCTCAACG+TGG | + | chr4_2:53794151-53794170 | Msa0607100:intron | 45.0% | |
| CAGATGTTTCTCAACGTGGA+AGG | + | chr4_2:53794155-53794174 | Msa0607100:intron | 45.0% | |
| TCTCAACGTGGAAGGGAAAA+CGG | + | chr4_2:53794163-53794182 | Msa0607100:CDS | 45.0% | |
| !! | TCTTTGAGACACTCTAGCAC+TGG | - | chr4_2:53794200-53794219 | None:intergenic | 45.0% |
| AGAGTCGCTCCCAAGAAATT+AGG | + | chr4_2:53794217-53794236 | Msa0607100:CDS | 45.0% | |
| GAGTCGCTCCCAAGAAATTA+GGG | + | chr4_2:53794218-53794237 | Msa0607100:CDS | 45.0% | |
| !!! | GGGACTTTTGGTTCTAGTGA+AGG | + | chr4_2:53794238-53794257 | Msa0607100:CDS | 45.0% |
| ATCGTATCTCAGACAGCATC+AGG | + | chr4_2:53794280-53794299 | Msa0607100:CDS | 45.0% | |
| ACAGCATCAGGTGTATTGTC+TGG | + | chr4_2:53794292-53794311 | Msa0607100:CDS | 45.0% | |
| ! | TCAGGTGTATTGTCTGGTTC+AGG | + | chr4_2:53794298-53794317 | Msa0607100:CDS | 45.0% |
| ! | GGTGTTCTAAATGCTAGACC+AGG | + | chr4_2:53794319-53794338 | Msa0607100:CDS | 45.0% |
| ATCTGGACTACTTTCCCACA+TGG | + | chr4_2:53794354-53794373 | Msa0607100:CDS | 45.0% | |
| AGAAAATCTTCAGCGTGCTG+AGG | + | chr4_2:53794674-53794693 | Msa0607100:CDS | 45.0% | |
| AGTGTCAAGATAGGGGAGAA+GGG | - | chr4_2:53795183-53795202 | None:intergenic | 45.0% | |
| AAGTGTCAAGATAGGGGAGA+AGG | - | chr4_2:53795184-53795203 | None:intergenic | 45.0% | |
| AAATAAGCGGAGACAGGAAC+AGG | + | chr4_2:53795438-53795457 | Msa0607100:CDS | 45.0% | |
| TGTGATGAACTGCATCAGGT+GGG | - | chr4_2:53795485-53795504 | None:intergenic | 45.0% | |
| ATGTGATGAACTGCATCAGG+TGG | - | chr4_2:53795486-53795505 | None:intergenic | 45.0% | |
| GGCAATGCATATTGCTTCAG+AGG | - | chr4_2:53795517-53795536 | None:intergenic | 45.0% | |
| CTCATGCATCTCGTAACTCA+AGG | + | chr4_2:53795554-53795573 | Msa0607100:CDS | 45.0% | |
| GTAACTCAAGGGAGCAGTTA+AGG | + | chr4_2:53795566-53795585 | Msa0607100:CDS | 45.0% | |
| ATGTGTACAAAATGCGGCTC+TGG | - | chr4_2:53795766-53795785 | None:intergenic | 45.0% | |
| !! | CACTGATGGGTTACAGACAA+AGG | + | chr4_2:53795901-53795920 | Msa0607100:intron | 45.0% |
| ! | GATAGATATTTTCCTGGGGG+GGG | + | chr4_2:53796028-53796047 | Msa0607100:intron | 45.0% |
| ! | ATAGATATTTTCCTGGGGGG+GGG | + | chr4_2:53796029-53796048 | Msa0607100:intron | 45.0% |
| !! | AGCCAAAGTGGTATTGATCC+GGG | - | chr4_2:53796231-53796250 | None:intergenic | 45.0% |
| !! | CAGCCAAAGTGGTATTGATC+CGG | - | chr4_2:53796232-53796251 | None:intergenic | 45.0% |
| TCAAGCCTTGCAACGAGTAA+TGG | - | chr4_2:53796269-53796288 | None:intergenic | 45.0% | |
| CAATCAGTTTCTTGGGCTGA+GGG | - | chr4_2:53796533-53796552 | None:intergenic | 45.0% | |
| ACAATCAGTTTCTTGGGCTG+AGG | - | chr4_2:53796534-53796553 | None:intergenic | 45.0% | |
| TCAGCCCAAGAAACTGATTG+TGG | + | chr4_2:53796533-53796552 | Msa0607100:CDS | 45.0% | |
| !! | AAAAATATACATAAAAATAA+AGG | - | chr4_2:53796884-53796903 | None:intergenic | 5.0% |
| !!! | TATTTTTATGTATATTTTTA+TGG | + | chr4_2:53796885-53796904 | Msa0607100:intron | 5.0% |
| AATGAAGATGCTGCACCCTG+CGG | + | chr4_2:53789136-53789155 | Msa0607100:exon | 50.0% | |
| TCAGCTCATTTCCTTCCGCA+GGG | - | chr4_2:53789154-53789173 | None:intergenic | 50.0% | |
| TCATCCAAGTACGCATCTCC+TGG | - | chr4_2:53789194-53789213 | None:intergenic | 50.0% | |
| GTCAGACAAACAACATGGGG+AGG | + | chr4_2:53789223-53789242 | Msa0607100:CDS | 50.0% | |
| AAACAACATGGGGAGGTTGC+AGG | + | chr4_2:53789230-53789249 | Msa0607100:CDS | 50.0% | |
| TGATGGAGGAGAAAAGGACC+TGG | + | chr4_2:53789310-53789329 | Msa0607100:CDS | 50.0% | |
| AGGACCTGGCAAAAGAGTTG+AGG | + | chr4_2:53789324-53789343 | Msa0607100:CDS | 50.0% | |
| GGACCTGGCAAAAGAGTTGA+GGG | + | chr4_2:53789325-53789344 | Msa0607100:CDS | 50.0% | |
| ! | TAGCCCTCAACTCTTTTGCC+AGG | - | chr4_2:53789331-53789350 | None:intergenic | 50.0% |
| GTGTGTAGCACGGAAACAGA+GGG | - | chr4_2:53789859-53789878 | None:intergenic | 50.0% | |
| TGTTTCCGTGCTACACACCA+TGG | + | chr4_2:53789861-53789880 | Msa0607100:intron | 50.0% | |
| GTTTCCGTGCTACACACCAT+GGG | + | chr4_2:53789862-53789881 | Msa0607100:intron | 50.0% | |
| CATACCCATGGTGTGTAGCA+CGG | - | chr4_2:53789869-53789888 | None:intergenic | 50.0% | |
| TCCCCCAATACTCTCTTGTC+AGG | - | chr4_2:53790181-53790200 | None:intergenic | 50.0% | |
| ! | GTGCTTACACACCTTTTGGG+AGG | - | chr4_2:53792102-53792121 | None:intergenic | 50.0% |
| ACAGCAAAGCTCATGACTGC+AGG | - | chr4_2:53792385-53792404 | None:intergenic | 50.0% | |
| TGCTTCCATACGAATCTCCC+GGG | - | chr4_2:53792419-53792438 | None:intergenic | 50.0% | |
| CTGCTTCCATACGAATCTCC+CGG | - | chr4_2:53792420-53792439 | None:intergenic | 50.0% | |
| !! | CCGTGGAATACCTGTTTTGG+TGG | + | chr4_2:53792587-53792606 | Msa0607100:CDS | 50.0% |
| TCTGTTGCAACGCCACATCT+AGG | - | chr4_2:53792717-53792736 | None:intergenic | 50.0% | |
| GCGTTGCAACAGAAATGGCA+TGG | + | chr4_2:53792724-53792743 | Msa0607100:intron | 50.0% | |
| GGATCCAAGATACCAGAACG+TGG | - | chr4_2:53793184-53793203 | None:intergenic | 50.0% | |
| ATGGAGGACGAAGAATGGGA+AGG | - | chr4_2:53793307-53793326 | None:intergenic | 50.0% | |
| GAGGAATGGAGGACGAAGAA+TGG | - | chr4_2:53793312-53793331 | None:intergenic | 50.0% | |
| ATCTGACCTTCGAGGAATGG+AGG | - | chr4_2:53793323-53793342 | None:intergenic | 50.0% | |
| TGCATCCAGGGAATCTTCAG+CGG | + | chr4_2:53793432-53793451 | Msa0607100:CDS | 50.0% | |
| GTCTTGGTATTTCCGCCAAC+AGG | + | chr4_2:53793533-53793552 | Msa0607100:CDS | 50.0% | |
| TGTTGCTGATAACCCGTTCG+AGG | - | chr4_2:53793596-53793615 | None:intergenic | 50.0% | |
| !! | TCGAACGGGTTATCAGCAAC+AGG | + | chr4_2:53793595-53793614 | Msa0607100:CDS | 50.0% |
| TCCAGAGAAACGTCCAGATC+GGG | - | chr4_2:53793674-53793693 | None:intergenic | 50.0% | |
| GTCCAGAGAAACGTCCAGAT+CGG | - | chr4_2:53793675-53793694 | None:intergenic | 50.0% | |
| ! | TCTCAGAGGCATGCAGCAAA+GGG | - | chr4_2:53793750-53793769 | None:intergenic | 50.0% |
| ! | TTCTCAGAGGCATGCAGCAA+AGG | - | chr4_2:53793751-53793770 | None:intergenic | 50.0% |
| !! | AAGGTGCTGCTTCCACATCT+GGG | + | chr4_2:53794257-53794276 | Msa0607100:CDS | 50.0% |
| CTGAGATACGATCCCAGATG+TGG | - | chr4_2:53794272-53794291 | None:intergenic | 50.0% | |
| CCAGATGAAGTAGCACTACC+TGG | - | chr4_2:53794340-53794359 | None:intergenic | 50.0% | |
| !! | CCAGGTAGTGCTACTTCATC+TGG | + | chr4_2:53794337-53794356 | Msa0607100:CDS | 50.0% |
| !! | TGGTAGTGGACTAGTGGTAC+TGG | + | chr4_2:53794872-53794891 | Msa0607100:intron | 50.0% |
| !! | AGTGGACTAGTGGTACTGGT+AGG | + | chr4_2:53794876-53794895 | Msa0607100:intron | 50.0% |
| TCCTTAGGGTCTCCTCTTCA+CGG | + | chr4_2:53795031-53795050 | Msa0607100:intron | 50.0% | |
| AGGAGATATCCTCCGTGAAG+AGG | - | chr4_2:53795046-53795065 | None:intergenic | 50.0% | |
| GGGGAGAAGGGAAAATTAGC+TGG | - | chr4_2:53795171-53795190 | None:intergenic | 50.0% | |
| GTGATGAACTGCATCAGGTG+GGG | - | chr4_2:53795484-53795503 | None:intergenic | 50.0% | |
| ATTGCCTCTGTTGTGCGACA+TGG | + | chr4_2:53795531-53795550 | Msa0607100:CDS | 50.0% | |
| GTTAAGGGCTCATGGTGGTT+TGG | + | chr4_2:53795582-53795601 | Msa0607100:CDS | 50.0% | |
| ! | AGGTTGAACAAGCACTGCTG+AGG | + | chr4_2:53795698-53795717 | Msa0607100:CDS | 50.0% |
| ! | TGAACAAGCACTGCTGAGGA+AGG | + | chr4_2:53795702-53795721 | Msa0607100:CDS | 50.0% |
| ! | TAGATATTTTCCTGGGGGGG+GGG | + | chr4_2:53796030-53796049 | Msa0607100:intron | 50.0% |
| TGCCCGGATCAATACCACTT+TGG | + | chr4_2:53796226-53796245 | Msa0607100:CDS | 50.0% | |
| TTGATAGGGGAACGCAGAGA+TGG | + | chr4_2:53796585-53796604 | Msa0607100:CDS | 50.0% | |
| ACGCAGAGATGGTCAAGTGT+TGG | + | chr4_2:53796596-53796615 | Msa0607100:CDS | 50.0% | |
| CTCAGCTCATTTCCTTCCGC+AGG | - | chr4_2:53789155-53789174 | None:intergenic | 55.0% | |
| CCAAGTACGCATCTCCTGGA+GGG | - | chr4_2:53789190-53789209 | None:intergenic | 55.0% | |
| TCCAAGTACGCATCTCCTGG+AGG | - | chr4_2:53789191-53789210 | None:intergenic | 55.0% | |
| AAAGGCCTTGGTACCTGCAG+AGG | - | chr4_2:53789609-53789628 | None:intergenic | 55.0% | |
| GAGGACAGAGGAAAAGGCCT+TGG | - | chr4_2:53789621-53789640 | None:intergenic | 55.0% | |
| GGTGTGTAGCACGGAAACAG+AGG | - | chr4_2:53789860-53789879 | None:intergenic | 55.0% | |
| CGTGCTACACACCATGGGTA+TGG | + | chr4_2:53789867-53789886 | Msa0607100:intron | 55.0% | |
| AGAGAGTGGTAGAGGGCAAG+AGG | + | chr4_2:53789956-53789975 | Msa0607100:intron | 55.0% | |
| GCTTCCATACGAATCTCCCG+GGG | - | chr4_2:53792418-53792437 | None:intergenic | 55.0% | |
| ! | CGCTATTGATGGCATGTGGC+AGG | + | chr4_2:53792991-53793010 | Msa0607100:CDS | 55.0% |
| GCATCTATGTCTGTTGGGGG+TGG | + | chr4_2:53793130-53793149 | Msa0607100:CDS | 55.0% | |
| ACGGCCACGTTCTGGTATCT+TGG | + | chr4_2:53793177-53793196 | Msa0607100:CDS | 55.0% | |
| CTTCGTCCTCCATTCCTCGA+AGG | + | chr4_2:53793314-53793333 | Msa0607100:CDS | 55.0% | |
| GCTGCCGCATTGCTTGATTG+AGG | - | chr4_2:53793373-53793392 | None:intergenic | 55.0% | |
| GCATCCAGGGAATCTTCAGC+GGG | + | chr4_2:53793433-53793452 | Msa0607100:CDS | 55.0% | |
| TGTACCCGCTGAAGATTCCC+TGG | - | chr4_2:53793440-53793459 | None:intergenic | 55.0% | |
| TTGGAGAAAGAGCCCCGATC+TGG | + | chr4_2:53793658-53793677 | Msa0607100:CDS | 55.0% | |
| CCAGAGAAACGTCCAGATCG+GGG | - | chr4_2:53793673-53793692 | None:intergenic | 55.0% | |
| !! | GAAGGTGCTGCTTCCACATC+TGG | + | chr4_2:53794256-53794275 | Msa0607100:CDS | 55.0% |
| TCCGTGAAGAGGAGACCCTA+AGG | - | chr4_2:53795035-53795054 | None:intergenic | 55.0% | |
| TTAGGGTCTCCTCTTCACGG+AGG | + | chr4_2:53795034-53795053 | Msa0607100:intron | 55.0% | |
| CAGGAACAGGCAGCCGAAAA+TGG | + | chr4_2:53795451-53795470 | Msa0607100:CDS | 55.0% | |
| TGAGCCATGTCGCACAACAG+AGG | - | chr4_2:53795538-53795557 | None:intergenic | 55.0% | |
| AGGGAGCAGTTAAGGGCTCA+TGG | + | chr4_2:53795574-53795593 | Msa0607100:CDS | 55.0% | |
| GAGCAGTTAAGGGCTCATGG+TGG | + | chr4_2:53795577-53795596 | Msa0607100:CDS | 55.0% | |
| ! | AGATATTTTCCTGGGGGGGG+GGG | + | chr4_2:53796031-53796050 | Msa0607100:intron | 55.0% |
| AAGATGCTGCACCCTGCGGA+AGG | + | chr4_2:53789140-53789159 | Msa0607100:CDS | 60.0% | |
| CCCTCCAGGAGATGCGTACT+TGG | + | chr4_2:53789187-53789206 | Msa0607100:CDS | 60.0% | |
| ACATGGGGAGGTTGCAGGTG+AGG | + | chr4_2:53789235-53789254 | Msa0607100:CDS | 60.0% | |
| AGTGGTAGAGGGCAAGAGGC+AGG | + | chr4_2:53789960-53789979 | Msa0607100:intron | 60.0% | |
| GTGGTAGAGGGCAAGAGGCA+GGG | + | chr4_2:53789961-53789980 | Msa0607100:intron | 60.0% | |
| TAGAGGGCAAGAGGCAGGGA+GGG | + | chr4_2:53789965-53789984 | Msa0607100:intron | 60.0% | |
| TTGCTGTACCCGATCGTCCC+CGG | + | chr4_2:53792398-53792417 | Msa0607100:CDS | 60.0% | |
| ACGAATCTCCCGGGGACGAT+CGG | - | chr4_2:53792410-53792429 | None:intergenic | 60.0% | |
| TCGTCCCCGGGAGATTCGTA+TGG | + | chr4_2:53792411-53792430 | Msa0607100:CDS | 60.0% | |
| TCGACTCAACGGCCACGTTC+TGG | + | chr4_2:53793169-53793188 | Msa0607100:CDS | 60.0% | |
| CCCCGATCTGGACGTTTCTC+TGG | + | chr4_2:53793670-53793689 | Msa0607100:CDS | 60.0% | |
| !! | AATGCGGCTCTGGACAGCTC+TGG | - | chr4_2:53795756-53795775 | None:intergenic | 60.0% |
| GTAGAGGGCAAGAGGCAGGG+AGG | + | chr4_2:53789964-53789983 | Msa0607100:intron | 65.0% | |
| TGCTGTACCCGATCGTCCCC+GGG | + | chr4_2:53792399-53792418 | Msa0607100:CDS | 65.0% | |
| CGAATCTCCCGGGGACGATC+GGG | - | chr4_2:53792409-53792428 | None:intergenic | 65.0% | |
| TTCTGACTTCCCCCCCCCCC+AGG | - | chr4_2:53796043-53796062 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 53789131 | 53796995 | 53789131 | ID=Msa0607100;Name=Msa0607100 |
| chr4_2 | mRNA | 53789131 | 53796995 | 53789131 | ID=Msa0607100-mRNA-1;Parent=Msa0607100;Name=Msa0607100-mRNA-1;_AED=0.03;_eAED=0.03;_QI=6|1|1|1|0.91|0.92|13|301|955 |
| chr4_2 | exon | 53789131 | 53789472 | 53789131 | ID=Msa0607100-mRNA-1:exon:13363;Parent=Msa0607100-mRNA-1 |
| chr4_2 | exon | 53789570 | 53789614 | 53789570 | ID=Msa0607100-mRNA-1:exon:13364;Parent=Msa0607100-mRNA-1 |
| chr4_2 | exon | 53790799 | 53790978 | 53790799 | ID=Msa0607100-mRNA-1:exon:13365;Parent=Msa0607100-mRNA-1 |
| chr4_2 | exon | 53791085 | 53791168 | 53791085 | ID=Msa0607100-mRNA-1:exon:13366;Parent=Msa0607100-mRNA-1 |
| chr4_2 | exon | 53792379 | 53792470 | 53792379 | ID=Msa0607100-mRNA-1:exon:13367;Parent=Msa0607100-mRNA-1 |
| chr4_2 | exon | 53792557 | 53792640 | 53792557 | ID=Msa0607100-mRNA-1:exon:13368;Parent=Msa0607100-mRNA-1 |
| chr4_2 | exon | 53792976 | 53793814 | 53792976 | ID=Msa0607100-mRNA-1:exon:13369;Parent=Msa0607100-mRNA-1 |
| chr4_2 | exon | 53794158 | 53794546 | 53794158 | ID=Msa0607100-mRNA-1:exon:13370;Parent=Msa0607100-mRNA-1 |
| chr4_2 | exon | 53794630 | 53794764 | 53794630 | ID=Msa0607100-mRNA-1:exon:13371;Parent=Msa0607100-mRNA-1 |
| chr4_2 | exon | 53795406 | 53795812 | 53795406 | ID=Msa0607100-mRNA-1:exon:13372;Parent=Msa0607100-mRNA-1 |
| chr4_2 | exon | 53796220 | 53796334 | 53796220 | ID=Msa0607100-mRNA-1:exon:13373;Parent=Msa0607100-mRNA-1 |
| chr4_2 | exon | 53796513 | 53796893 | 53796513 | ID=Msa0607100-mRNA-1:exon:13374;Parent=Msa0607100-mRNA-1 |
| chr4_2 | exon | 53796914 | 53796995 | 53796914 | ID=Msa0607100-mRNA-1:exon:13375;Parent=Msa0607100-mRNA-1 |
| chr4_2 | five_prime_UTR | 53789131 | 53789136 | 53789131 | ID=Msa0607100-mRNA-1:five_prime_utr;Parent=Msa0607100-mRNA-1 |
| chr4_2 | CDS | 53789137 | 53789472 | 53789137 | ID=Msa0607100-mRNA-1:cds;Parent=Msa0607100-mRNA-1 |
| chr4_2 | CDS | 53789570 | 53789614 | 53789570 | ID=Msa0607100-mRNA-1:cds;Parent=Msa0607100-mRNA-1 |
| chr4_2 | CDS | 53790799 | 53790978 | 53790799 | ID=Msa0607100-mRNA-1:cds;Parent=Msa0607100-mRNA-1 |
| chr4_2 | CDS | 53791085 | 53791168 | 53791085 | ID=Msa0607100-mRNA-1:cds;Parent=Msa0607100-mRNA-1 |
| chr4_2 | CDS | 53792379 | 53792470 | 53792379 | ID=Msa0607100-mRNA-1:cds;Parent=Msa0607100-mRNA-1 |
| chr4_2 | CDS | 53792557 | 53792640 | 53792557 | ID=Msa0607100-mRNA-1:cds;Parent=Msa0607100-mRNA-1 |
| chr4_2 | CDS | 53792976 | 53793814 | 53792976 | ID=Msa0607100-mRNA-1:cds;Parent=Msa0607100-mRNA-1 |
| chr4_2 | CDS | 53794158 | 53794546 | 53794158 | ID=Msa0607100-mRNA-1:cds;Parent=Msa0607100-mRNA-1 |
| chr4_2 | CDS | 53794630 | 53794764 | 53794630 | ID=Msa0607100-mRNA-1:cds;Parent=Msa0607100-mRNA-1 |
| chr4_2 | CDS | 53795406 | 53795812 | 53795406 | ID=Msa0607100-mRNA-1:cds;Parent=Msa0607100-mRNA-1 |
| chr4_2 | CDS | 53796220 | 53796334 | 53796220 | ID=Msa0607100-mRNA-1:cds;Parent=Msa0607100-mRNA-1 |
| chr4_2 | CDS | 53796513 | 53796674 | 53796513 | ID=Msa0607100-mRNA-1:cds;Parent=Msa0607100-mRNA-1 |
| chr4_2 | three_prime_UTR | 53796675 | 53796893 | 53796675 | ID=Msa0607100-mRNA-1:three_prime_utr;Parent=Msa0607100-mRNA-1 |
| chr4_2 | three_prime_UTR | 53796914 | 53796995 | 53796914 | ID=Msa0607100-mRNA-1:three_prime_utr;Parent=Msa0607100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
