AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0611480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0611480 MtrunA17_Chr4g0044881 88.732 213 16 4 1 210 33 240 2.29e-125 353
Msa0611480 MtrunA17_Chr4g0044901 69.198 237 39 9 1 210 1 230 4.07e-97 281
Msa0611480 MtrunA17_Chr4g0044871 68.559 229 36 9 9 210 12 231 2.09e-93 272
Msa0611480 MtrunA17_Chr4g0044911 66.390 241 41 10 1 210 3 234 4.60e-91 266
Msa0611480 MtrunA17_Chr8g0375031 55.172 116 44 1 30 145 77 184 1.83e-38 132
Msa0611480 MtrunA17_Chr7g0221471 52.336 107 48 2 37 142 3 107 6.61e-32 114
Msa0611480 MtrunA17_Chr7g0221501 65.333 75 26 0 68 142 33 107 7.76e-31 111
Msa0611480 MtrunA17_Chr2g0295421 69.863 73 22 0 70 142 80 152 2.56e-29 109
Msa0611480 MtrunA17_Chr1g0195151 66.234 77 21 1 70 146 66 137 1.27e-28 108
Msa0611480 MtrunA17_Chr8g0344961 55.046 109 38 3 69 175 113 212 1.46e-28 110
Msa0611480 MtrunA17_Chr8g0383591 79.310 58 12 0 85 142 144 201 4.38e-28 107
Msa0611480 MtrunA17_Chr2g0334031 68.919 74 17 1 69 142 106 173 6.03e-28 108
Msa0611480 MtrunA17_Chr1g0184081 67.105 76 24 1 68 142 3 78 1.30e-27 102
Msa0611480 MtrunA17_Chr5g0396911 82.456 57 10 0 85 141 111 167 3.58e-27 105
Msa0611480 MtrunA17_Chr2g0282651 67.647 68 22 0 82 149 66 133 4.91e-27 103
Msa0611480 MtrunA17_Chr2g0316931 64.789 71 25 0 72 142 17 87 6.11e-26 99.8
Msa0611480 MtrunA17_Chr3g0126321 76.190 63 13 1 81 141 106 168 1.12e-25 102
Msa0611480 MtrunA17_Chr3g0099871 70.968 62 18 0 82 143 23 84 2.15e-25 98.6
Msa0611480 MtrunA17_Chr4g0055781 62.651 83 26 2 76 153 92 174 3.39e-25 99.0
Msa0611480 MtrunA17_Chr3g0131601 46.377 138 50 3 5 142 19 132 3.68e-25 99.0
Msa0611480 MtrunA17_Chr5g0438831 58.442 77 32 0 72 148 32 108 5.44e-25 99.0
Msa0611480 MtrunA17_Chr2g0283171 49.505 101 45 2 48 142 20 120 7.83e-25 95.5
Msa0611480 MtrunA17_Chr1g0158971 60.227 88 33 1 80 165 109 196 9.28e-25 99.4
Msa0611480 MtrunA17_Chr4g0055801 62.821 78 28 1 67 143 135 212 1.13e-24 98.6
Msa0611480 MtrunA17_Chr8g0335331 59.259 81 31 2 75 153 114 194 1.96e-24 95.5
Msa0611480 MtrunA17_Chr5g0438801 62.319 69 26 0 80 148 45 113 4.70e-24 96.3
Msa0611480 MtrunA17_Chr4g0046161 54.321 81 36 1 63 142 34 114 5.13e-24 92.0
Msa0611480 MtrunA17_Chr7g0261101 67.105 76 23 2 69 142 2 77 6.83e-24 92.4
Msa0611480 MtrunA17_Chr4g0055761 67.647 68 21 1 77 143 136 203 1.15e-23 95.1
Msa0611480 MtrunA17_Chr1g0186731 57.895 76 31 1 68 142 3 78 1.32e-23 91.7
Msa0611480 MtrunA17_Chr8g0387801 61.111 72 28 0 70 141 91 162 1.47e-23 95.5
Msa0611480 MtrunA17_Chr5g0437671 64.789 71 23 1 84 154 83 151 2.13e-23 96.3
Msa0611480 MtrunA17_Chr7g0250731 59.740 77 30 1 85 160 60 136 2.24e-23 92.8
Msa0611480 MtrunA17_Chr5g0432821 51.724 87 42 0 80 166 118 204 3.73e-23 94.0
Msa0611480 MtrunA17_Chr2g0331231 43.243 111 49 3 64 160 6 116 4.53e-23 92.0
Msa0611480 MtrunA17_Chr7g0250721 59.740 77 30 1 85 160 60 136 4.99e-23 92.0
Msa0611480 MtrunA17_Chr3g0134161 39.535 129 56 3 49 175 12 120 6.14e-23 90.9
Msa0611480 MtrunA17_Chr7g0261151 61.842 76 28 1 68 142 2 77 8.11e-23 89.7
Msa0611480 MtrunA17_Chr1g0170531 56.962 79 33 1 66 143 69 147 8.17e-23 92.0
Msa0611480 MtrunA17_Chr7g0232261 46.237 93 49 1 69 160 44 136 9.13e-23 92.0
Msa0611480 MtrunA17_Chr8g0390091 43.269 104 54 2 49 150 1 101 1.07e-22 91.7
Msa0611480 MtrunA17_Chr8g0335321 56.790 81 29 2 85 164 95 170 1.21e-22 90.9
Msa0611480 MtrunA17_Chr2g0283181 60.563 71 25 2 74 143 139 207 2.38e-22 92.0
Msa0611480 MtrunA17_Chr7g0250711 67.797 59 18 1 85 142 59 117 2.75e-22 90.1
Msa0611480 MtrunA17_Chr3g0140161 38.235 136 74 3 75 203 32 164 3.26e-22 89.4
Msa0611480 MtrunA17_Chr8g0335311 58.571 70 27 2 85 152 95 164 3.45e-22 89.7
Msa0611480 MtrunA17_Chr4g0003421 65.625 64 22 0 82 145 36 99 5.41e-22 90.1
Msa0611480 MtrunA17_Chr1g0186671 72.131 61 16 1 83 142 16 76 5.71e-22 87.4
Msa0611480 MtrunA17_Chr2g0282621 65.574 61 21 0 82 142 11 71 7.92e-22 87.8
Msa0611480 MtrunA17_Chr8g0382491 70.175 57 17 0 86 142 113 169 7.94e-22 90.5
Msa0611480 MtrunA17_Chr4g0026881 53.846 91 33 3 86 167 97 187 8.26e-22 89.7
Msa0611480 MtrunA17_Chr4g0063751 61.194 67 26 0 81 147 2 68 1.05e-21 88.6
Msa0611480 MtrunA17_Chr1g0196871 57.746 71 29 1 74 143 4 74 1.19e-21 85.5
Msa0611480 MtrunA17_Chr2g0297331 69.492 59 17 1 85 142 13 71 1.90e-21 85.9
Msa0611480 MtrunA17_Chr5g0437371 68.421 57 18 0 85 141 65 121 2.00e-21 90.1
Msa0611480 MtrunA17_Chr8g0367911 53.247 77 35 1 79 155 37 112 2.62e-21 89.4
Msa0611480 MtrunA17_Chr6g0486701 54.054 74 33 1 86 158 44 117 2.83e-21 87.8
Msa0611480 MtrunA17_Chr3g0115631 70.175 57 17 0 86 142 150 206 2.91e-21 89.7
Msa0611480 MtrunA17_Chr7g0257911 65.517 58 20 0 85 142 30 87 3.27e-21 89.0
Msa0611480 MtrunA17_Chr4g0002631 63.793 58 21 0 85 142 7 64 3.89e-21 86.7
Msa0611480 MtrunA17_Chr5g0425561 53.750 80 37 0 63 142 150 229 4.02e-21 89.7
Msa0611480 MtrunA17_Chr2g0323171 67.797 59 19 0 86 144 65 123 4.34e-21 86.3
Msa0611480 MtrunA17_Chr5g0399441 47.126 87 45 1 73 158 15 101 5.65e-21 85.9
Msa0611480 MtrunA17_Chr8g0340311 55.072 69 31 0 82 150 43 111 1.28e-20 85.5
Msa0611480 MtrunA17_Chr2g0333011 66.102 59 20 0 85 143 6 64 1.36e-20 84.7
Msa0611480 MtrunA17_Chr4g0055951 51.852 81 37 2 82 160 69 149 1.73e-20 86.3
Msa0611480 MtrunA17_Chr1g0196781 68.421 57 18 0 86 142 152 208 1.84e-20 87.4
Msa0611480 MtrunA17_Chr2g0324131 61.194 67 26 0 76 142 208 274 2.36e-20 88.2
Msa0611480 MtrunA17_Chr3g0129421 82.759 58 10 0 85 142 169 226 4.10e-20 87.0
Msa0611480 MtrunA17_Chr4g0026931 65.152 66 20 2 87 149 132 197 4.68e-20 85.5
Msa0611480 MtrunA17_Chr6g0461941 57.955 88 37 0 68 155 2 89 6.60e-20 84.0
Msa0611480 MtrunA17_Chr8g0334801 46.429 84 41 1 73 152 35 118 7.36e-20 83.6
Msa0611480 MtrunA17_Chr3g0137174 63.793 58 21 0 85 142 7 64 8.54e-20 83.2
Msa0611480 MtrunA17_Chr1g0153151 54.167 72 30 1 86 157 44 112 9.72e-20 82.8
Msa0611480 MtrunA17_Chr1g0189941 62.500 56 21 0 86 141 24 79 1.16e-19 82.0
Msa0611480 MtrunA17_Chr4g0023411 47.423 97 44 1 86 175 65 161 1.43e-19 82.8
Msa0611480 MtrunA17_Chr2g0286161 53.623 69 32 0 73 141 37 105 1.45e-19 84.7
Msa0611480 MtrunA17_Chr4g0066931 51.948 77 33 1 69 145 40 112 1.95e-19 84.7
Msa0611480 MtrunA17_Chr1g0183981 56.410 78 31 2 75 149 64 141 2.16e-19 82.4
Msa0611480 MtrunA17_Chr1g0186681 68.333 60 17 1 85 142 18 77 2.25e-19 80.5
Msa0611480 MtrunA17_Chr5g0401871 56.897 58 25 0 85 142 24 81 2.38e-19 81.6
Msa0611480 MtrunA17_Chr1g0184031 58.108 74 28 2 79 149 77 150 2.46e-19 82.8
Msa0611480 MtrunA17_Chr1g0183961 74.576 59 14 1 85 142 26 84 2.91e-19 80.5
Msa0611480 MtrunA17_Chr1g0150691 52.239 67 32 0 76 142 12 78 3.05e-19 82.4
Msa0611480 MtrunA17_Chr7g0253424 54.795 73 32 1 70 141 22 94 4.97e-19 82.8
Msa0611480 MtrunA17_Chr5g0412641 49.412 85 32 1 68 141 17 101 6.27e-19 83.6
Msa0611480 MtrunA17_Chr1g0150631 52.239 67 32 0 76 142 28 94 9.09e-19 81.3
Msa0611480 MtrunA17_Chr1g0184011 63.077 65 21 2 88 149 86 150 1.49e-18 80.5
Msa0611480 MtrunA17_Chr7g0252381 58.824 68 28 0 85 152 41 108 1.50e-18 81.6
Msa0611480 MtrunA17_Chr7g0261181 71.186 59 16 1 85 142 12 70 1.66e-18 78.2
Msa0611480 MtrunA17_Chr1g0150671 34.014 147 70 4 79 199 39 184 1.91e-18 81.3
Msa0611480 MtrunA17_Chr6g0473931 54.167 72 33 0 70 141 17 88 1.99e-18 79.7
Msa0611480 MtrunA17_Chr8g0378811 53.623 69 32 0 73 141 42 110 2.02e-18 80.9
Msa0611480 MtrunA17_Chr8g0345531 68.750 48 15 0 85 132 115 162 2.49e-18 82.0
Msa0611480 MtrunA17_Chr4g0062551 58.065 62 26 0 85 146 52 113 2.80e-18 77.8
Msa0611480 MtrunA17_Chr1g0184071 51.724 87 38 3 67 149 49 135 2.88e-18 78.6
Msa0611480 MtrunA17_Chr7g0265851 54.545 66 30 0 77 142 15 80 3.20e-18 79.3
Msa0611480 MtrunA17_Chr1g0184061 46.316 95 42 3 67 154 52 144 3.42e-18 79.7
Msa0611480 MtrunA17_Chr8g0346741 42.697 89 49 1 70 158 23 109 4.43e-18 78.2
Msa0611480 MtrunA17_Chr7g0275841 44.156 77 43 0 66 142 8 84 4.55e-18 78.2
Msa0611480 MtrunA17_Chr6g0473941 52.778 72 34 0 70 141 17 88 4.57e-18 79.0
Msa0611480 MtrunA17_Chr6g0461271 50.000 84 34 2 66 141 5 88 4.65e-18 80.9
Msa0611480 MtrunA17_Chr1g0167781 54.348 92 33 3 67 149 57 148 5.17e-18 79.0
Msa0611480 MtrunA17_Chr7g0243431 60.317 63 18 1 86 141 78 140 7.22e-18 81.3
Msa0611480 MtrunA17_Chr8g0350701 54.412 68 31 0 77 144 18 85 8.31e-18 79.7
Msa0611480 MtrunA17_Chr4g0062161 51.282 78 35 1 69 146 39 113 9.06e-18 78.2
Msa0611480 MtrunA17_Chr1g0150661 56.140 57 25 0 86 142 35 91 1.01e-17 78.2
Msa0611480 MtrunA17_Chr6g0453661 61.404 57 22 0 85 141 37 93 1.15e-17 80.5
Msa0611480 MtrunA17_Chr7g0217991 56.061 66 29 0 85 150 41 106 1.69e-17 80.1
Msa0611480 MtrunA17_Chr4g0042761 57.143 63 27 0 85 147 47 109 1.80e-17 79.0
Msa0611480 MtrunA17_Chr4g0017851 44.706 85 46 1 69 152 100 184 1.88e-17 79.0
Msa0611480 MtrunA17_Chr1g0203861 49.367 79 37 1 66 141 21 99 3.83e-17 76.3
Msa0611480 MtrunA17_Chr1g0146191 51.765 85 41 0 68 152 29 113 7.51e-17 76.6
Msa0611480 MtrunA17_Chr1g0183931 62.667 75 25 2 78 149 93 167 9.00e-17 76.3
Msa0611480 MtrunA17_Chr1g0170471 65.385 52 17 1 93 143 90 141 1.11e-16 74.3
Msa0611480 MtrunA17_Chr7g0261201 63.514 74 24 2 79 149 91 164 1.65e-16 75.5
Msa0611480 MtrunA17_Chr1g0200931 45.455 77 39 1 73 146 10 86 1.89e-16 72.8
Msa0611480 MtrunA17_Chr6g0486711 48.352 91 39 1 68 150 23 113 2.17e-16 75.1
Msa0611480 MtrunA17_Chr6g0473741 50.000 72 36 0 70 141 50 121 2.75e-16 74.7
Msa0611480 MtrunA17_Chr3g0142081 46.226 106 46 2 70 164 14 119 2.77e-16 74.7
Msa0611480 MtrunA17_Chr2g0301191 47.826 69 36 0 74 142 7 75 3.07e-16 74.3
Msa0611480 MtrunA17_Chr6g0473881 50.000 72 36 0 70 141 94 165 3.20e-16 75.5
Msa0611480 MtrunA17_Chr1g0209891 56.140 57 25 0 77 133 45 101 5.13e-16 74.7
Msa0611480 MtrunA17_Chr5g0396171 47.761 67 35 0 88 154 26 92 6.22e-16 70.5
Msa0611480 MtrunA17_Chr6g0473981 52.055 73 32 1 72 141 37 109 7.56e-16 73.6
Msa0611480 MtrunA17_Chr3g0083501 62.000 50 19 0 93 142 2 51 8.33e-16 69.3
Msa0611480 MtrunA17_Chr6g0473781 50.000 72 36 0 70 141 41 112 8.63e-16 73.2
Msa0611480 MtrunA17_Chr6g0473961 50.685 73 33 1 72 141 37 109 1.10e-15 72.8
Msa0611480 MtrunA17_Chr2g0301171 46.377 69 37 0 74 142 7 75 1.45e-15 72.0
Msa0611480 MtrunA17_Chr1g0149331 66.667 60 20 0 84 143 5 64 1.63e-15 72.0
Msa0611480 MtrunA17_Chr5g0396191 56.716 67 29 0 86 152 11 77 1.65e-15 71.6
Msa0611480 MtrunA17_Chr1g0205961 53.571 56 26 0 77 132 106 161 1.83e-15 73.9
Msa0611480 MtrunA17_Chr6g0473771 47.222 72 38 0 70 141 27 98 2.06e-15 69.7
Msa0611480 MtrunA17_Chr6g0473971 49.315 73 34 1 72 141 37 109 2.09e-15 72.4
Msa0611480 MtrunA17_Chr8g0345551 61.702 47 18 0 86 132 117 163 4.24e-15 72.8
Msa0611480 MtrunA17_Chr1g0186741 64.286 70 22 2 82 148 69 138 4.69e-15 70.9
Msa0611480 MtrunA17_Chr7g0225131 49.254 67 31 1 76 142 19 82 5.00e-15 67.8
Msa0611480 MtrunA17_Chr1g0155751 51.220 82 31 1 70 142 14 95 7.54e-15 71.2
Msa0611480 MtrunA17_Chr3g0136551 52.632 57 27 0 85 141 64 120 8.18e-15 71.2
Msa0611480 MtrunA17_Chr5g0438841 45.679 81 44 0 73 153 3 83 9.72e-15 69.3
Msa0611480 MtrunA17_Chr6g0464581 82.000 50 9 0 93 142 187 236 1.06e-14 72.0
Msa0611480 MtrunA17_Chr1g0201671 82.000 50 9 0 93 142 146 195 1.16e-14 71.6
Msa0611480 MtrunA17_Chr7g0261171 67.164 67 19 2 86 149 85 151 1.33e-14 70.1
Msa0611480 MtrunA17_Chr6g0473861 57.143 56 24 0 86 141 63 118 1.51e-14 70.5
Msa0611480 MtrunA17_Chr6g0474001 49.315 73 34 1 72 141 37 109 2.01e-14 70.1
Msa0611480 MtrunA17_Chr2g0301181 43.836 73 41 0 70 142 3 75 2.50e-14 69.3
Msa0611480 MtrunA17_Chr4g0057241 52.459 61 28 1 82 142 11 70 2.74e-14 67.8
Msa0611480 MtrunA17_Chr3g0137831 65.000 60 21 0 85 144 7 66 1.24e-13 67.0
Msa0611480 MtrunA17_Chr5g0396301 51.613 62 28 1 83 142 15 76 1.58e-13 65.9
Msa0611480 MtrunA17_Chr5g0423811 52.381 63 27 1 71 133 76 135 5.51e-13 66.2
Msa0611480 MtrunA17_Chr3g0136541 51.852 54 26 0 88 141 42 95 7.50e-13 65.5
Msa0611480 MtrunA17_Chr3g0108241 44.565 92 46 3 71 158 97 187 9.50e-13 65.5
Msa0611480 MtrunA17_Chr5g0398061 43.750 80 36 2 71 141 31 110 2.08e-12 63.9
Msa0611480 MtrunA17_Chr5g0424051 50.000 84 34 3 68 143 71 154 2.88e-12 64.3
Msa0611480 MtrunA17_Chr6g0473791 46.154 65 35 0 70 134 41 105 3.90e-12 61.6
Msa0611480 MtrunA17_Chr5g0398091 42.500 80 37 2 71 141 36 115 4.08e-12 63.2
Msa0611480 MtrunA17_Chr5g0396741 64.516 62 22 0 81 142 112 173 5.18e-12 63.9
Msa0611480 MtrunA17_Chr5g0398081 38.776 98 49 3 71 159 31 126 5.87e-12 62.8
Msa0611480 MtrunA17_Chr5g0422501 50.769 65 29 2 83 146 104 166 9.86e-12 63.2
Msa0611480 MtrunA17_Chr1g0203831 58.621 58 23 1 85 142 56 112 2.84e-11 60.5
Msa0611480 MtrunA17_Chr3g0114761 45.679 81 40 2 69 147 10 88 3.68e-11 60.5
Msa0611480 MtrunA17_Chr2g0321071 49.153 59 28 2 86 142 47 105 4.45e-11 60.1
Msa0611480 MtrunA17_Chr1g0198661 43.243 74 40 1 67 140 45 116 5.49e-11 60.8
Msa0611480 MtrunA17_Chr5g0400871 39.216 102 56 4 86 183 355 454 5.57e-11 61.2
Msa0611480 MtrunA17_Chr1g0186721 59.701 67 22 2 81 142 8 74 6.29e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0611480 AT4G34410.1 49.718 177 43 5 10 145 24 195 3.52e-39 135
Msa0611480 AT5G67000.1 43.151 146 70 3 6 150 48 181 1.57e-30 111
Msa0611480 AT2G33710.1 73.134 67 18 0 76 142 60 126 4.77e-30 110
Msa0611480 AT5G61890.1 42.029 138 67 2 5 142 22 146 4.93e-30 111
Msa0611480 AT2G33710.2 73.134 67 18 0 76 142 60 126 6.11e-30 110
Msa0611480 AT2G47520.1 61.176 85 30 1 61 142 22 106 1.13e-29 108
Msa0611480 AT5G13330.1 64.865 74 26 0 69 142 22 95 5.34e-29 108
Msa0611480 AT4G11140.1 82.759 58 10 0 85 142 86 143 8.81e-29 109
Msa0611480 AT3G16770.1 68.056 72 19 1 71 142 68 135 8.45e-28 105
Msa0611480 AT3G15210.1 66.197 71 24 0 76 146 15 85 2.32e-26 101
Msa0611480 AT5G44210.1 71.212 66 19 0 82 147 29 94 2.93e-26 100
Msa0611480 AT1G72360.1 67.188 64 21 0 79 142 18 81 6.96e-26 100
Msa0611480 AT1G03800.1 67.188 64 21 0 81 144 48 111 7.37e-26 100
Msa0611480 AT4G27950.1 50.000 104 50 1 74 175 106 209 7.71e-26 102
Msa0611480 AT1G72360.3 57.692 78 33 0 65 142 53 130 1.21e-25 100
Msa0611480 AT1G72360.2 67.188 64 21 0 79 142 69 132 1.38e-25 100
Msa0611480 AT4G23750.2 64.286 70 25 0 72 141 108 177 1.91e-25 101
Msa0611480 AT4G23750.1 64.286 70 25 0 72 141 108 177 1.91e-25 101
Msa0611480 AT5G47220.1 46.269 134 57 4 13 143 54 175 3.51e-25 99.0
Msa0611480 AT1G28370.2 74.138 58 15 0 85 142 57 114 4.26e-25 97.8
Msa0611480 AT1G28370.1 74.138 58 15 0 85 142 19 76 7.57e-25 95.9
Msa0611480 AT5G50080.2 46.479 142 61 1 16 142 1 142 1.03e-24 97.4
Msa0611480 AT5G47230.1 51.923 104 44 2 41 143 116 214 1.49e-24 98.6
Msa0611480 AT3G61630.1 69.355 62 19 0 80 141 99 160 4.26e-24 97.4
Msa0611480 AT5G53290.1 72.881 59 16 0 85 143 124 182 4.92e-24 97.8
Msa0611480 AT5G51190.1 72.881 59 15 1 86 143 72 130 6.06e-24 95.1
Msa0611480 AT4G17500.1 71.875 64 17 1 81 143 143 206 8.09e-24 95.9
Msa0611480 AT3G20310.1 47.475 99 47 2 80 178 21 114 8.86e-24 95.1
Msa0611480 AT5G43410.1 71.429 63 17 1 81 142 10 72 1.19e-23 92.0
Msa0611480 AT1G50640.1 65.625 64 22 0 80 143 22 85 1.98e-23 94.0
Msa0611480 AT2G22200.1 42.105 133 72 3 20 148 3 134 2.60e-23 94.4
Msa0611480 AT5G50080.1 46.479 142 52 2 16 142 1 133 3.04e-23 93.2
Msa0611480 AT5G07310.1 43.478 138 59 3 5 142 30 148 6.61e-23 93.2
Msa0611480 AT5G11590.1 50.588 85 42 0 68 152 33 117 6.64e-23 92.8
Msa0611480 AT2G44840.1 55.814 86 34 2 68 149 71 156 8.01e-23 92.4
Msa0611480 AT1G43160.1 49.265 136 38 5 19 142 1 117 8.52e-23 91.3
Msa0611480 AT4G32800.1 53.846 78 36 0 75 152 8 85 1.12e-22 91.7
Msa0611480 AT4G13620.1 62.500 72 27 0 78 149 224 295 1.31e-22 94.4
Msa0611480 AT1G22985.1 64.865 74 21 2 80 148 69 142 1.57e-22 89.7
Msa0611480 AT5G05410.2 54.545 88 33 1 86 166 79 166 1.60e-22 93.2
Msa0611480 AT5G05410.1 54.545 88 33 1 86 166 79 166 2.44e-22 93.2
Msa0611480 AT3G23230.1 69.355 62 18 1 82 142 16 77 2.79e-22 88.6
Msa0611480 AT1G22190.1 58.537 82 29 2 66 142 58 139 4.38e-22 91.3
Msa0611480 AT4G17490.1 74.576 59 14 1 86 143 137 195 4.70e-22 91.3
Msa0611480 AT2G20350.1 44.275 131 64 3 7 137 17 138 5.36e-22 88.2
Msa0611480 AT1G36060.1 58.228 79 31 1 66 144 125 201 6.42e-22 91.7
Msa0611480 AT1G75490.1 57.143 70 30 0 86 155 42 111 7.78e-22 89.4
Msa0611480 AT4G39780.1 44.538 119 60 2 24 142 37 149 9.15e-22 90.5
Msa0611480 AT5G61600.1 67.797 59 18 1 86 143 88 146 9.51e-22 89.7
Msa0611480 AT1G15360.1 64.516 62 22 0 82 143 3 64 1.13e-21 88.6
Msa0611480 AT1G15360.2 64.516 62 22 0 82 143 3 64 1.13e-21 88.6
Msa0611480 AT1G28360.1 66.129 62 21 0 81 142 7 68 1.37e-21 88.2
Msa0611480 AT1G78080.1 71.930 57 16 0 86 142 152 208 1.90e-21 90.5
Msa0611480 AT1G71130.1 64.865 74 20 2 79 146 71 144 2.11e-21 87.0
Msa0611480 AT4G16750.1 48.352 91 45 2 70 158 23 113 2.85e-21 87.0
Msa0611480 AT5G19790.1 57.333 75 31 1 68 141 3 77 3.15e-21 88.6
Msa0611480 AT5G25810.1 49.398 83 42 0 68 150 18 100 3.75e-21 87.8
Msa0611480 AT2G31230.1 56.790 81 32 2 73 150 73 153 3.95e-21 88.2
Msa0611480 AT5G13910.1 57.534 73 31 0 73 145 7 79 4.80e-21 87.4
Msa0611480 AT3G23240.1 52.427 103 42 4 86 181 82 184 5.19e-21 87.4
Msa0611480 AT2G44940.1 51.250 80 39 0 73 152 87 166 5.23e-21 89.0
Msa0611480 AT2G35700.1 48.750 80 40 1 80 158 39 118 5.31e-21 86.7
Msa0611480 AT2G46310.1 70.175 57 17 0 85 141 98 154 5.60e-21 88.6
Msa0611480 AT2G25820.1 58.209 67 28 0 86 152 26 92 5.66e-21 87.4
Msa0611480 AT4G28140.1 70.175 57 17 0 86 142 143 199 5.91e-21 88.6
Msa0611480 AT5G64750.1 78.000 50 11 0 93 142 192 241 7.27e-21 89.7
Msa0611480 AT5G65130.2 68.421 57 18 0 86 142 113 169 7.83e-21 88.2
Msa0611480 AT4G06746.1 51.429 70 34 0 73 142 23 92 7.98e-21 85.1
Msa0611480 AT5G65130.1 68.421 57 18 0 86 142 111 167 8.51e-21 87.8
Msa0611480 AT1G71450.1 52.703 74 35 0 86 159 24 97 8.70e-21 85.9
Msa0611480 AT1G46768.1 50.685 73 36 0 70 142 15 87 9.07e-21 85.1
Msa0611480 AT1G46768.2 50.685 73 36 0 70 142 15 87 9.07e-21 85.1
Msa0611480 AT2G20880.1 70.175 57 17 0 86 142 187 243 9.28e-21 89.0
Msa0611480 AT1G46768.3 50.685 73 36 0 70 142 15 87 9.84e-21 84.7
Msa0611480 AT4G36900.1 55.738 61 27 0 82 142 26 86 1.08e-20 85.9
Msa0611480 AT5G25390.2 56.522 69 30 0 85 153 6 74 1.10e-20 85.9
Msa0611480 AT5G07580.1 56.000 75 30 2 70 143 96 168 1.61e-20 85.9
Msa0611480 AT5G25190.1 63.793 58 21 0 85 142 7 64 1.62e-20 85.1
Msa0611480 AT4G18450.1 66.667 66 20 2 80 143 104 169 2.10e-20 87.4
Msa0611480 AT3G60490.1 46.667 90 43 2 74 158 55 144 2.72e-20 86.3
Msa0611480 AT3G57600.1 54.412 68 31 0 85 152 27 94 3.15e-20 86.3
Msa0611480 AT2G23340.1 59.649 57 23 0 86 142 28 84 6.12e-20 83.6
Msa0611480 AT4G25470.1 55.556 72 32 0 70 141 35 106 6.22e-20 84.3
Msa0611480 AT3G16280.2 63.158 57 21 0 86 142 79 135 6.75e-20 85.1
Msa0611480 AT3G16280.1 63.158 57 21 0 86 142 61 117 6.76e-20 84.7
Msa0611480 AT5G67190.1 55.738 61 27 0 82 142 17 77 6.80e-20 83.6
Msa0611480 AT1G21910.1 45.679 81 36 1 86 166 50 122 9.19e-20 84.3
Msa0611480 AT5G18560.1 41.414 99 58 0 73 171 42 140 1.30e-19 85.9
Msa0611480 AT4G25490.1 54.167 72 33 0 70 141 32 103 1.31e-19 83.6
Msa0611480 AT3G50260.1 53.125 64 30 0 79 142 14 77 1.50e-19 82.0
Msa0611480 AT1G12980.1 66.667 57 19 0 85 141 56 112 1.84e-19 85.1
Msa0611480 AT1G24590.1 51.190 84 37 1 85 164 57 140 2.54e-19 84.3
Msa0611480 AT3G11020.1 64.912 57 20 0 86 142 78 134 3.02e-19 84.7
Msa0611480 AT1G01250.1 52.113 71 34 0 80 150 39 109 3.99e-19 81.6
Msa0611480 AT3G14230.2 36.893 206 80 5 18 209 81 250 4.05e-19 84.7
Msa0611480 AT5G25390.1 55.072 69 28 1 85 153 6 71 4.81e-19 81.3
Msa0611480 AT4G25480.1 52.778 72 34 0 70 141 35 106 4.96e-19 82.0
Msa0611480 AT1G74930.1 50.000 70 35 0 73 142 8 77 1.59e-18 80.1
Msa0611480 AT5G18450.1 64.286 56 20 0 86 141 34 89 2.72e-18 81.6
Msa0611480 AT2G40350.2 44.186 86 40 1 67 144 47 132 4.50e-18 78.2
Msa0611480 AT2G40340.2 59.322 59 24 0 86 144 14 72 4.74e-18 80.5
Msa0611480 AT2G40340.5 59.322 59 24 0 86 144 14 72 4.74e-18 80.5
Msa0611480 AT2G40340.4 59.322 59 24 0 86 144 14 72 4.74e-18 80.5
Msa0611480 AT2G40350.1 44.186 86 40 1 67 144 40 125 6.16e-18 77.8
Msa0611480 AT5G67010.1 39.286 112 57 3 10 119 21 123 9.07e-18 77.4
Msa0611480 AT1G53910.1 65.333 75 23 1 82 153 121 195 1.13e-17 80.5
Msa0611480 AT1G53910.2 65.333 75 23 1 82 153 121 195 1.13e-17 80.5
Msa0611480 AT1G53910.3 65.333 75 23 1 82 153 119 193 1.19e-17 80.5
Msa0611480 AT2G40340.6 47.619 84 35 1 70 144 54 137 1.20e-17 80.5
Msa0611480 AT1G28160.1 62.295 61 23 0 85 145 38 98 1.23e-17 79.0
Msa0611480 AT2G40340.1 47.619 84 35 1 70 144 47 130 1.24e-17 80.1
Msa0611480 AT3G14230.1 41.290 155 60 4 69 209 117 254 1.28e-17 80.5
Msa0611480 AT3G14230.3 41.290 155 60 4 69 209 112 249 1.36e-17 80.5
Msa0611480 AT5G21960.1 60.345 58 23 0 85 142 6 63 1.39e-17 78.2
Msa0611480 AT2G40340.3 47.619 84 35 1 70 144 47 130 1.44e-17 79.7
Msa0611480 AT1G12890.1 53.623 69 32 0 73 141 8 76 1.63e-17 78.2
Msa0611480 AT2G36450.1 54.930 71 26 2 78 142 2 72 4.41e-17 76.3
Msa0611480 AT1G19210.1 49.254 67 34 0 76 142 2 68 7.75e-17 75.5
Msa0611480 AT3G23220.1 68.182 66 20 1 85 149 13 78 9.59e-17 73.9
Msa0611480 AT5G51990.1 51.389 72 35 0 70 141 38 109 1.10e-16 75.9
Msa0611480 AT1G06160.1 64.706 68 21 2 86 150 82 149 1.76e-16 75.9
Msa0611480 AT4G31060.1 54.386 57 26 0 86 142 27 83 3.46e-16 73.9
Msa0611480 AT1G04370.1 69.841 63 18 1 81 142 15 77 5.02e-16 72.0
Msa0611480 AT1G53170.1 60.870 69 27 0 76 144 21 89 5.31e-16 73.2
Msa0611480 AT1G68550.1 68.750 48 15 0 85 132 112 159 9.24e-16 74.7
Msa0611480 AT1G68550.2 68.750 48 15 0 85 132 112 159 9.24e-16 74.7
Msa0611480 AT2G40220.1 59.722 72 26 1 73 141 39 110 2.16e-15 73.9
Msa0611480 AT1G77200.1 52.703 74 35 0 77 150 34 107 2.62e-15 72.4
Msa0611480 AT5G11190.1 56.098 82 27 1 85 166 6 78 3.54e-15 71.2
Msa0611480 AT1G63030.2 47.368 76 37 1 69 141 10 85 3.99e-15 70.9
Msa0611480 AT1G63030.1 47.368 76 37 1 69 141 10 85 3.99e-15 70.9
Msa0611480 AT1G12610.1 43.421 76 40 1 69 141 10 85 2.25e-14 69.3
Msa0611480 AT5G61590.1 56.338 71 30 1 74 143 95 165 3.72e-14 68.6
Msa0611480 AT1G22810.1 50.000 68 31 2 84 148 12 79 6.84e-14 66.6
Msa0611480 AT2G38340.1 59.091 66 19 1 85 142 69 134 8.58e-14 68.6
Msa0611480 AT1G71520.1 40.449 89 47 3 84 167 12 99 2.16e-13 65.5
Msa0611480 AT1G49120.1 49.412 85 37 2 79 157 76 160 2.88e-13 67.8
Msa0611480 AT1G77640.1 52.941 68 30 1 77 142 32 99 3.04e-13 67.0
Msa0611480 AT1G64380.1 65.079 63 22 0 80 142 130 192 5.97e-13 67.0
Msa0611480 AT3G25890.1 61.224 49 19 0 84 132 129 177 8.50e-13 66.6
Msa0611480 AT3G25890.2 61.224 49 19 0 84 132 129 177 8.50e-13 66.6
Msa0611480 AT1G33760.1 53.846 65 30 0 86 150 20 84 1.89e-12 63.5
Msa0611480 AT1G68840.2 52.542 59 26 1 83 141 62 118 3.00e-11 62.0
Msa0611480 AT1G68840.1 52.542 59 26 1 83 141 62 118 3.00e-11 62.0
Msa0611480 AT5G52020.1 52.381 63 29 1 80 142 59 120 4.72e-11 60.5
Msa0611480 AT1G44830.1 53.846 65 29 1 85 148 34 98 6.01e-11 60.1

Find 62 sgRNAs with CRISPR-Local

Find 72 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACAACTTATGAGGTTTA+TGG 0.166648 4_2:+59708389 Msa0611480:CDS
AGATGCAAATTGGGAATAAT+TGG 0.175252 4_2:+59708325 Msa0611480:CDS
ATGAATGAAGAGATGCAAAT+TGG 0.244938 4_2:+59708315 Msa0611480:CDS
GGCAGAGGCCATGGGGAAAA+TGG 0.260541 4_2:+59708085 Msa0611480:CDS
CAAGACGTGCGGTCCGTGTT+TGG 0.354583 4_2:+59708127 Msa0611480:CDS
ACATGAACAACCACTTCTTC+TGG 0.357166 4_2:-59708279 None:intergenic
GTTCCTCAACAGTACGCTTA+AGG 0.360964 4_2:-59708257 None:intergenic
TGCAACATAGCAGGATGTTT+AGG 0.384768 4_2:+59707979 Msa0611480:CDS
TTCCTCAACAGTACGCTTAA+GGG 0.385516 4_2:-59708256 None:intergenic
GATTCTTCTGATTCTAGAAC+AGG 0.395276 4_2:+59708411 Msa0611480:CDS
GCAGAGGCCATGGGGAAAAT+GGG 0.401441 4_2:+59708086 Msa0611480:CDS
TGAATGAAGAGATGCAAATT+GGG 0.421311 4_2:+59708316 Msa0611480:CDS
GAGGAGTGAGGCAGAGGCCA+TGG 0.424131 4_2:+59708076 Msa0611480:CDS
GATGCAAATTGGGAATAATT+GGG 0.430125 4_2:+59708326 Msa0611480:CDS
CTTAAAGCAAATAGTTCAAC+CGG 0.446320 4_2:+59707930 Msa0611480:CDS
AGCTTCCTCCGCCGTGGTAA+AGG 0.448550 4_2:-59708157 None:intergenic
GGTGAGGGTGGTGGTGGAGA+AGG 0.454388 4_2:-59707827 None:intergenic
TGCTATGTTGCATTCACGAC+AGG 0.455760 4_2:-59707968 None:intergenic
ATCGGAGGTGAGGGTGGTGG+TGG 0.456825 4_2:-59707833 None:intergenic
ACCGGAGACTACGTTGGTTA+AGG 0.463151 4_2:-59707881 None:intergenic
CAAACACGGACCGCACGTCT+TGG 0.474738 4_2:-59708126 None:intergenic
AGGAGTGAGGCAGAGGCCAT+GGG 0.478974 4_2:+59708077 Msa0611480:CDS
AAACACGGACCGCACGTCTT+GGG 0.480412 4_2:-59708125 None:intergenic
CTTTAAGCCGCTGCTTCCCA+CGG 0.487689 4_2:-59707914 None:intergenic
TCCCACGGTGGAGGTAGAAC+CGG 0.489008 4_2:-59707899 None:intergenic
AGTACAGAGGAGTGAGGCAG+AGG 0.495675 4_2:+59708070 Msa0611480:CDS
TTGATCGGAGGTGAGGGTGG+TGG 0.503551 4_2:-59707836 None:intergenic
GCCGCTGCTTCCCACGGTGG+AGG 0.512019 4_2:-59707908 None:intergenic
GCCTTAACCAACGTAGTCTC+CGG 0.524588 4_2:+59707880 Msa0611480:CDS
CGTGCGGTCCGTGTTTGGCT+CGG 0.524816 4_2:+59708132 Msa0611480:CDS
AGAAGTGGTTGTTCATGTAA+AGG 0.530475 4_2:+59708284 Msa0611480:CDS
TGTCGTGAATGCAACATAGC+AGG 0.533664 4_2:+59707970 Msa0611480:CDS
AGTTCAACCGGCAGTGAACA+TGG 0.535559 4_2:+59707942 Msa0611480:CDS
CAGGTTTCCATGTTCACTGC+CGG 0.538746 4_2:-59707949 None:intergenic
GACAAGTGGAAAATTAAGCT+TGG 0.549098 4_2:-59708226 None:intergenic
ACCTCCACCGTGGGAAGCAG+CGG 0.549438 4_2:+59707907 Msa0611480:CDS
GAGTTCTTGATCGGAGGTGA+GGG 0.565113 4_2:-59707842 None:intergenic
TTCTTGATCGGAGGTGAGGG+TGG 0.566361 4_2:-59707839 None:intergenic
AGAGTTCTTGATCGGAGGTG+AGG 0.568888 4_2:-59707843 None:intergenic
TAAGCTTGGCTCTCGGCCCA+CGG 0.569292 4_2:-59708212 None:intergenic
AATGCCGCTATCGAGTTCCG+TGG 0.571654 4_2:+59708195 Msa0611480:CDS
GGAAAATTAAGCTTGGCTCT+CGG 0.585752 4_2:-59708219 None:intergenic
CGGAACCTTTACCACGGCGG+AGG 0.586411 4_2:+59708152 Msa0611480:CDS
ATCCCTTAAGCGTACTGTTG+AGG 0.586589 4_2:+59708254 Msa0611480:CDS
GACTGAGAGTTCTTGATCGG+AGG 0.604051 4_2:-59707848 None:intergenic
TCCGGTTCTACCTCCACCGT+GGG 0.607896 4_2:+59707898 Msa0611480:CDS
TGTTGAGGAACCAGAAGAAG+TGG 0.608852 4_2:+59708269 Msa0611480:CDS
GATGACTGAGAGTTCTTGAT+CGG 0.621381 4_2:-59707851 None:intergenic
ATGCCGCTATCGAGTTCCGT+GGG 0.623086 4_2:+59708196 Msa0611480:CDS
GCTAAGAATAATAAGTACAG+AGG 0.636771 4_2:+59708057 Msa0611480:CDS
TAAAGGTTCCGAGCCAAACA+CGG 0.637276 4_2:-59708140 None:intergenic
CTCCGGTTCTACCTCCACCG+TGG 0.642327 4_2:+59707897 Msa0611480:CDS
TAAGCCGCTGCTTCCCACGG+TGG 0.646302 4_2:-59707911 None:intergenic
TCTAGCAGCTTCCTCCGCCG+TGG 0.654538 4_2:-59708163 None:intergenic
GGAGTGAGGCAGAGGCCATG+GGG 0.658766 4_2:+59708078 Msa0611480:CDS
CGGCCCACGGAACTCGATAG+CGG 0.673908 4_2:-59708199 None:intergenic
ATAATAAGTACAGAGGAGTG+AGG 0.674805 4_2:+59708064 Msa0611480:CDS
TTGGCTCGGAACCTTTACCA+CGG 0.679817 4_2:+59708146 Msa0611480:CDS
GATTCGTGACCCAAGACGTG+CGG 0.696462 4_2:+59708116 Msa0611480:CDS
TTAAGGGATTCATCGACAAG+TGG 0.701306 4_2:-59708240 None:intergenic
GGTAGAACCGGAGACTACGT+TGG 0.709452 4_2:-59707887 None:intergenic
GCTCGGAACCTTTACCACGG+CGG 0.739922 4_2:+59708149 Msa0611480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTTTTTGTTTTTGTTT+TGG - chr4_2:59708033-59708052 None:intergenic 15.0%
!! ATAATTGGGAATGTGATTTT+TGG + chr4_2:59708340-59708359 Msa0611480:CDS 25.0%
!! TAATTGGGAATGTGATTTTT+GGG + chr4_2:59708341-59708360 Msa0611480:CDS 25.0%
CTTAAAGCAAATAGTTCAAC+CGG + chr4_2:59707930-59707949 Msa0611480:CDS 30.0%
!!! GTTTTGGTTTTTTCTCTTCA+GGG - chr4_2:59708017-59708036 None:intergenic 30.0%
!!! TGTTTTGGTTTTTTCTCTTC+AGG - chr4_2:59708018-59708037 None:intergenic 30.0%
GCTAAGAATAATAAGTACAG+AGG + chr4_2:59708057-59708076 Msa0611480:CDS 30.0%
ATGAATGAAGAGATGCAAAT+TGG + chr4_2:59708315-59708334 Msa0611480:CDS 30.0%
TGAATGAAGAGATGCAAATT+GGG + chr4_2:59708316-59708335 Msa0611480:CDS 30.0%
AGATGCAAATTGGGAATAAT+TGG + chr4_2:59708325-59708344 Msa0611480:CDS 30.0%
GATGCAAATTGGGAATAATT+GGG + chr4_2:59708326-59708345 Msa0611480:CDS 30.0%
!!! TGTGATTTTTGGGATAGTAT+TGG + chr4_2:59708351-59708370 Msa0611480:CDS 30.0%
!!! GTGATTTTTGGGATAGTATT+GGG + chr4_2:59708352-59708371 Msa0611480:CDS 30.0%
!!! TGATTTTTGGGATAGTATTG+GGG + chr4_2:59708353-59708372 Msa0611480:CDS 30.0%
! CTGATTTTCAACAACTTATG+AGG + chr4_2:59708382-59708401 Msa0611480:CDS 30.0%
TCAACAACTTATGAGGTTTA+TGG + chr4_2:59708389-59708408 Msa0611480:CDS 30.0%
ATAATAAGTACAGAGGAGTG+AGG + chr4_2:59708064-59708083 Msa0611480:CDS 35.0%
GACAAGTGGAAAATTAAGCT+TGG - chr4_2:59708229-59708248 None:intergenic 35.0%
AGAAGTGGTTGTTCATGTAA+AGG + chr4_2:59708284-59708303 Msa0611480:CDS 35.0%
!! GATTCTTCTGATTCTAGAAC+AGG + chr4_2:59708411-59708430 Msa0611480:CDS 35.0%
GATGACTGAGAGTTCTTGAT+CGG - chr4_2:59707854-59707873 None:intergenic 40.0%
TGCAACATAGCAGGATGTTT+AGG + chr4_2:59707979-59707998 Msa0611480:CDS 40.0%
! GGAAAATTAAGCTTGGCTCT+CGG - chr4_2:59708222-59708241 None:intergenic 40.0%
TTAAGGGATTCATCGACAAG+TGG - chr4_2:59708243-59708262 None:intergenic 40.0%
TTCCTCAACAGTACGCTTAA+GGG - chr4_2:59708259-59708278 None:intergenic 40.0%
ACATGAACAACCACTTCTTC+TGG - chr4_2:59708282-59708301 None:intergenic 40.0%
TGCTATGTTGCATTCACGAC+AGG - chr4_2:59707971-59707990 None:intergenic 45.0%
TGTCGTGAATGCAACATAGC+AGG + chr4_2:59707970-59707989 Msa0611480:CDS 45.0%
TAAAGGTTCCGAGCCAAACA+CGG - chr4_2:59708143-59708162 None:intergenic 45.0%
ATCCCTTAAGCGTACTGTTG+AGG + chr4_2:59708254-59708273 Msa0611480:CDS 45.0%
GTTCCTCAACAGTACGCTTA+AGG - chr4_2:59708260-59708279 None:intergenic 45.0%
TGTTGAGGAACCAGAAGAAG+TGG + chr4_2:59708269-59708288 Msa0611480:CDS 45.0%
GAGTTCTTGATCGGAGGTGA+GGG - chr4_2:59707845-59707864 None:intergenic 50.0%
AGAGTTCTTGATCGGAGGTG+AGG - chr4_2:59707846-59707865 None:intergenic 50.0%
GACTGAGAGTTCTTGATCGG+AGG - chr4_2:59707851-59707870 None:intergenic 50.0%
GCCTTAACCAACGTAGTCTC+CGG + chr4_2:59707880-59707899 Msa0611480:CDS 50.0%
! ACCGGAGACTACGTTGGTTA+AGG - chr4_2:59707884-59707903 None:intergenic 50.0%
AGTTCAACCGGCAGTGAACA+TGG + chr4_2:59707942-59707961 Msa0611480:CDS 50.0%
CAGGTTTCCATGTTCACTGC+CGG - chr4_2:59707952-59707971 None:intergenic 50.0%
!! TTGGCTCGGAACCTTTACCA+CGG + chr4_2:59708146-59708165 Msa0611480:CDS 50.0%
TTCTTGATCGGAGGTGAGGG+TGG - chr4_2:59707842-59707861 None:intergenic 55.0%
GGTAGAACCGGAGACTACGT+TGG - chr4_2:59707890-59707909 None:intergenic 55.0%
CTTTAAGCCGCTGCTTCCCA+CGG - chr4_2:59707917-59707936 None:intergenic 55.0%
AGTACAGAGGAGTGAGGCAG+AGG + chr4_2:59708070-59708089 Msa0611480:CDS 55.0%
GCAGAGGCCATGGGGAAAAT+GGG + chr4_2:59708086-59708105 Msa0611480:CDS 55.0%
! TCAGCAGCCCATTTTCCCCA+TGG - chr4_2:59708096-59708115 None:intergenic 55.0%
GATTCGTGACCCAAGACGTG+CGG + chr4_2:59708116-59708135 Msa0611480:CDS 55.0%
AAACACGGACCGCACGTCTT+GGG - chr4_2:59708128-59708147 None:intergenic 55.0%
AATGCCGCTATCGAGTTCCG+TGG + chr4_2:59708195-59708214 Msa0611480:CDS 55.0%
ATGCCGCTATCGAGTTCCGT+GGG + chr4_2:59708196-59708215 Msa0611480:CDS 55.0%
TTGATCGGAGGTGAGGGTGG+TGG - chr4_2:59707839-59707858 None:intergenic 60.0%
TCCGGTTCTACCTCCACCGT+GGG + chr4_2:59707898-59707917 Msa0611480:CDS 60.0%
TCCCACGGTGGAGGTAGAAC+CGG - chr4_2:59707902-59707921 None:intergenic 60.0%
AGGAGTGAGGCAGAGGCCAT+GGG + chr4_2:59708077-59708096 Msa0611480:CDS 60.0%
GGCAGAGGCCATGGGGAAAA+TGG + chr4_2:59708085-59708104 Msa0611480:CDS 60.0%
CAAACACGGACCGCACGTCT+TGG - chr4_2:59708129-59708148 None:intergenic 60.0%
CAAGACGTGCGGTCCGTGTT+TGG + chr4_2:59708127-59708146 Msa0611480:CDS 60.0%
GCTCGGAACCTTTACCACGG+CGG + chr4_2:59708149-59708168 Msa0611480:CDS 60.0%
AGCTTCCTCCGCCGTGGTAA+AGG - chr4_2:59708160-59708179 None:intergenic 60.0%
! TAAGCTTGGCTCTCGGCCCA+CGG - chr4_2:59708215-59708234 None:intergenic 60.0%
!! GGTGAGGGTGGTGGTGGAGA+AGG - chr4_2:59707830-59707849 None:intergenic 65.0%
! ATCGGAGGTGAGGGTGGTGG+TGG - chr4_2:59707836-59707855 None:intergenic 65.0%
CTCCGGTTCTACCTCCACCG+TGG + chr4_2:59707897-59707916 Msa0611480:CDS 65.0%
ACCTCCACCGTGGGAAGCAG+CGG + chr4_2:59707907-59707926 Msa0611480:CDS 65.0%
TAAGCCGCTGCTTCCCACGG+TGG - chr4_2:59707914-59707933 None:intergenic 65.0%
GAGGAGTGAGGCAGAGGCCA+TGG + chr4_2:59708076-59708095 Msa0611480:CDS 65.0%
GGAGTGAGGCAGAGGCCATG+GGG + chr4_2:59708078-59708097 Msa0611480:CDS 65.0%
CGTGCGGTCCGTGTTTGGCT+CGG + chr4_2:59708132-59708151 Msa0611480:CDS 65.0%
CGGAACCTTTACCACGGCGG+AGG + chr4_2:59708152-59708171 Msa0611480:CDS 65.0%
TCTAGCAGCTTCCTCCGCCG+TGG - chr4_2:59708166-59708185 None:intergenic 65.0%
CGGCCCACGGAACTCGATAG+CGG - chr4_2:59708202-59708221 None:intergenic 65.0%
GCCGCTGCTTCCCACGGTGG+AGG - chr4_2:59707911-59707930 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 59707817 59708449 59707817 ID=Msa0611480;Name=Msa0611480
chr4_2 mRNA 59707817 59708449 59707817 ID=Msa0611480-mRNA-1;Parent=Msa0611480;Name=Msa0611480-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|210
chr4_2 exon 59707817 59708449 59707817 ID=Msa0611480-mRNA-1:exon:15887;Parent=Msa0611480-mRNA-1
chr4_2 CDS 59707817 59708449 59707817 ID=Msa0611480-mRNA-1:cds;Parent=Msa0611480-mRNA-1
Gene Sequence

>Msa0611480

ATGAATTACGCCTTCTCCACCACCACCCTCACCTCCGATCAAGAACTCTCAGTCATCGTCGCTGCCTTAACCAACGTAGTCTCCGGTTCTACCTCCACCGTGGGAAGCAGCGGCTTAAAGCAAATAGTTCAACCGGCAGTGAACATGGAAACCTGTCGTGAATGCAACATAGCAGGATGTTTAGGATGCAATTTCTTCCCTGAAGAGAAAAAACCAAAACAAAAACAAAAACAAAAGACAGCTAAGAATAATAAGTACAGAGGAGTGAGGCAGAGGCCATGGGGAAAATGGGCTGCTGAGATTCGTGACCCAAGACGTGCGGTCCGTGTTTGGCTCGGAACCTTTACCACGGCGGAGGAAGCTGCTAGAGCTTATGACAATGCCGCTATCGAGTTCCGTGGGCCGAGAGCCAAGCTTAATTTTCCACTTGTCGATGAATCCCTTAAGCGTACTGTTGAGGAACCAGAAGAAGTGGTTGTTCATGTAAAGGATGAGAATATGAATGAAGAGATGCAAATTGGGAATAATTGGGAATGTGATTTTTGGGATAGTATTGGGGAAGAAGCTGATTTTCAACAACTTATGAGGTTTATGGATTCTTCTGATTCTAGAACAGGAAACACTTTTAATTAG
Protein sequence

>Msa0611480

MNYAFSTTTLTSDQELSVIVAALTNVVSGSTSTVGSSGLKQIVQPAVNMETCRECNIAGCLGCNFFPEEKKPKQKQKQKTAKNNKYRGVRQRPWGKWAAEIRDPRRAVRVWLGTFTTAEEAARAYDNAAIEFRGPRAKLNFPLVDESLKRTVEEPEEVVVHVKDENMNEEMQIGNNWECDFWDSIGEEADFQQLMRFMDSSDSRTGNTFN*