AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0616480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0616480 MtrunA17_Chr8g0376071 97.436 117 3 0 1 117 268 384 2.64e-81 243
Msa0616480 MtrunA17_Chr6g0483721 70.085 117 35 0 1 117 285 401 1.94e-57 182
Msa0616480 MtrunA17_Chr1g0209341 61.468 109 42 0 1 109 298 406 1.23e-42 144
Msa0616480 MtrunA17_Chr4g0067961 51.282 117 56 1 1 117 280 395 8.78e-33 118
Msa0616480 MtrunA17_Chr2g0294991 47.009 117 58 1 1 117 340 452 2.00e-30 112
Msa0616480 MtrunA17_Chr4g0022111 37.273 110 67 2 1 109 192 300 5.51e-19 79.7
Msa0616480 MtrunA17_Chr2g0324081 36.937 111 67 3 1 109 199 308 1.68e-18 78.6
Msa0616480 MtrunA17_Chr1g0195091 36.752 117 65 3 1 116 31 139 4.65e-16 69.3
Msa0616480 MtrunA17_Chr1g0188731 33.071 127 67 4 1 109 212 338 3.68e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0616480 AT1G15030.1 59.633 109 41 2 2 109 251 357 1.61e-38 132
Msa0616480 AT2G01260.1 55.556 108 45 1 2 109 262 366 7.46e-35 123
Msa0616480 AT5G49220.1 48.214 112 51 1 1 112 300 404 9.31e-31 113
Msa0616480 AT4G16100.1 42.478 113 61 2 1 112 279 388 6.12e-23 92.0
Msa0616480 AT1G03610.1 37.615 109 67 1 1 109 192 299 8.48e-21 85.1
Msa0616480 AT4G03420.1 36.283 113 65 3 1 109 194 303 6.81e-18 77.4
Msa0616480 AT1G17830.1 33.898 118 69 2 1 109 214 331 6.80e-16 72.0
Msa0616480 AT4G28150.2 33.010 103 52 2 1 103 185 270 7.55e-14 66.2
Msa0616480 AT1G15030.2 87.097 31 4 0 6 36 255 285 7.89e-14 66.2
Msa0616480 AT4G28150.1 33.010 103 52 2 1 103 187 272 7.90e-14 66.2
Msa0616480 AT1G73210.3 35.088 114 68 3 1 109 197 309 8.31e-14 66.2
Msa0616480 AT1G73210.1 35.088 114 68 3 1 109 197 309 8.31e-14 66.2
Msa0616480 AT1G73210.2 35.088 114 68 3 1 109 195 307 8.39e-14 66.2
Msa0616480 AT2G01260.2 87.097 31 4 0 6 36 266 296 5.72e-13 63.9

Find 140 sgRNAs with CRISPR-Local

Find 734 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAGATCCCTTTAATTTAT+AGG 0.179141 4_2:-66354288 None:intergenic
GCTGAGACCCCTTTAATTTC+TGG 0.180813 4_2:+66354816 Msa0616480:three_prime_UTR
ATAAATTAAAGGGATCTATT+TGG 0.209391 4_2:+66354291 Msa0616480:CDS
CTTGGATTCCACAAAGTTAT+TGG 0.224982 4_2:+66345116 Msa0616480:five_prime_UTR
ACTTTGCTCTGAATGATCTA+TGG 0.228571 4_2:+66345884 Msa0616480:five_prime_UTR
AATGGCTGCCTATAAATTAA+AGG 0.234653 4_2:+66354280 Msa0616480:CDS
GGAAGCAGTGATTGCGAATA+TGG 0.267161 4_2:+66349888 Msa0616480:five_prime_UTR
ACACCACGGCAATGAAATTA+AGG 0.282097 4_2:-66354493 None:intergenic
TGATCTATGGGAATCGTTTA+AGG 0.293061 4_2:+66345897 Msa0616480:five_prime_UTR
AGTAGTGATGACAGTGAAAC+TGG 0.302541 4_2:+66350032 Msa0616480:five_prime_UTR
TATTTATGTCCAGAAATTAA+AGG 0.311748 4_2:-66354825 None:intergenic
TTCCTCTACTCAAATGGTTA+TGG 0.311910 4_2:-66355126 None:intergenic
TTTAAGGAGTGGAGTGCTTA+TGG 0.330153 4_2:+66345913 Msa0616480:five_prime_UTR
AAAGTAGGGATGGAAATATT+TGG 0.332123 4_2:-66354254 None:intergenic
CTGGGTACTGCACTGCAATT+TGG 0.335190 4_2:+66344952 Msa0616480:five_prime_UTR
GTGATTGCGAATATGGAAAA+AGG 0.338454 4_2:+66349895 Msa0616480:five_prime_UTR
ATTTATGTCCAGAAATTAAA+GGG 0.346240 4_2:-66354824 None:intergenic
TCGTGCAGGCTGCAGATAAA+TGG 0.347650 4_2:+66354354 Msa0616480:CDS
TACAAATGAATTGAATGATA+TGG 0.349820 4_2:+66354437 Msa0616480:exon
TTGGAACAAGGTCATCCTTA+TGG 0.360520 4_2:+66350083 Msa0616480:five_prime_UTR
TTTAACCGAGGGAATATAAC+TGG 0.361005 4_2:-66354464 None:intergenic
TATAACAAACCAATTAAGTT+GGG 0.361518 4_2:+66344893 Msa0616480:five_prime_UTR
GTGTTATGTAACTATGTTGT+TGG 0.362706 4_2:+66355039 Msa0616480:three_prime_UTR
TAGTAACATTGATAGGTTCT+TGG 0.367105 4_2:+66345098 Msa0616480:five_prime_UTR
TTGTCGGCTATTCAGCTATA+TGG 0.370596 4_2:+66345997 Msa0616480:five_prime_UTR
GAGGATCAAGAAGGAGAAAC+AGG 0.379160 4_2:-66344764 None:intergenic
TTCTCTCTCTTATTTAGTTT+AGG 0.379861 4_2:-66344630 None:intergenic
TTGCTATGTCTATACAAAAC+GGG 0.383602 4_2:-66350330 None:intergenic
CCCTTTGATCAAGTAGTAAA+GGG 0.386917 4_2:-66345945 None:intergenic
TATACTAACATACAAAGATT+TGG 0.397926 4_2:-66355011 None:intergenic
TAGAAGAGATTGATCGGTAA+TGG 0.408613 4_2:-66344720 None:intergenic
AGTCTGTTAGTAACATTGAT+AGG 0.410081 4_2:+66345091 Msa0616480:five_prime_UTR
GTACTATGTTCCGTATTTGT+CGG 0.410526 4_2:+66345981 Msa0616480:five_prime_UTR
TCCTACTCCTGGTCCTGTAC+TGG 0.411890 4_2:+66354205 Msa0616480:CDS
CCTTGTCAGCCAGCGGTTCA+CGG 0.419823 4_2:-66350106 None:intergenic
CCCTTTACTACTTGATCAAA+GGG 0.420560 4_2:+66345945 Msa0616480:five_prime_UTR
TAAATGGTTAAGGCTAGTTC+AGG 0.422552 4_2:+66354370 Msa0616480:CDS
GTTTATTTCCTCTACTCAAA+TGG 0.422701 4_2:-66355132 None:intergenic
TGTGTGGTGTGGCACAATTT+TGG 0.423773 4_2:+66354899 Msa0616480:three_prime_UTR
TCCTTATGGCCGTGAACCGC+TGG 0.427561 4_2:+66350097 Msa0616480:five_prime_UTR
AAGTATTTACAGTTCAATAA+TGG 0.431819 4_2:+66354794 Msa0616480:three_prime_UTR
ATGGCTGCCTATAAATTAAA+GGG 0.433226 4_2:+66354281 Msa0616480:CDS
TTATAACAAACCAATTAAGT+TGG 0.438912 4_2:+66344892 Msa0616480:five_prime_UTR
AATTACCTGTCAAGGGTGTA+TGG 0.444633 4_2:-66350496 None:intergenic
AGTGGAACTCCCTTCTGAAA+AGG 0.448655 4_2:+66354691 Msa0616480:three_prime_UTR
GAGAAGAGACACCACTTGTC+AGG 0.454698 4_2:-66349953 None:intergenic
TGATTCTTTCTTGTCTTCAC+CGG 0.457385 4_2:-66344997 None:intergenic
TCCCTTTGATCAAGTAGTAA+AGG 0.457484 4_2:-66345946 None:intergenic
GTGGAACTCCCTTCTGAAAA+GGG 0.458254 4_2:+66354692 Msa0616480:three_prime_UTR
TGAACTGTAAATACTTGTAC+AGG 0.460921 4_2:-66354787 None:intergenic
CTTGCTATGTCTATACAAAA+CGG 0.468123 4_2:-66350331 None:intergenic
GCAACAGACATCCAACTGTT+TGG 0.468240 4_2:-66350271 None:intergenic
CTTTGCTCTGAATGATCTAT+GGG 0.469746 4_2:+66345885 Msa0616480:five_prime_UTR
GGTTGTGACAGCCTAGTTGT+AGG 0.470124 4_2:+66354560 Msa0616480:three_prime_UTR
AATATGAAACAAAAGTTAAG+TGG 0.471447 4_2:+66354725 Msa0616480:three_prime_UTR
TAGGCAGCCATTGCAAAAGT+AGG 0.473321 4_2:-66354269 None:intergenic
GATTTAAAGAACTGATGATC+CGG 0.473580 4_2:-66354401 None:intergenic
GTTGTGATAATAGAAGAAAA+TGG 0.480423 4_2:+66354857 Msa0616480:three_prime_UTR
TGCAATTTGGTGGTGATGAT+CGG 0.482447 4_2:+66344965 Msa0616480:five_prime_UTR
AAGAAAGGATTGGAAAATGC+TGG 0.482548 4_2:+66344933 Msa0616480:five_prime_UTR
CCGTGAACCGCTGGCTGACA+AGG 0.488317 4_2:+66350106 Msa0616480:five_prime_UTR
CCTGTGGGTATTCGATATAT+AGG 0.490923 4_2:-66350425 None:intergenic
ATTGTTATATATCTTAACTC+TGG 0.499180 4_2:+66355095 Msa0616480:three_prime_UTR
GCAGGAAGTGGTCCTACTCC+TGG 0.503247 4_2:+66354194 Msa0616480:intron
TCCCTTTACTACTTGATCAA+AGG 0.504346 4_2:+66345944 Msa0616480:five_prime_UTR
AGCTGAATAGCCGACAAATA+CGG 0.507690 4_2:-66345991 None:intergenic
GAGTGGAGTGCTTATGGTGC+TGG 0.509550 4_2:+66345919 Msa0616480:five_prime_UTR
CATCAGTTCTTTAAATCGCA+TGG 0.513728 4_2:+66354407 Msa0616480:CDS
TGAACATATTGTTGCTCTGA+TGG 0.517078 4_2:+66354932 Msa0616480:three_prime_UTR
ATCGGTAATGGATGATTGAA+AGG 0.519623 4_2:-66344708 None:intergenic
GCCAGCGGTTCACGGCCATA+AGG 0.520857 4_2:-66350098 None:intergenic
TGGTACACCATCCATCTCAC+TGG 0.523799 4_2:-66354234 None:intergenic
AAATTTGCGAAAGAAAGGAT+TGG 0.524883 4_2:+66344923 Msa0616480:five_prime_UTR
AATTTCATAATTACCTGTCA+AGG 0.525386 4_2:-66350504 None:intergenic
TCAAGGGTGTATGGAGTGTA+TGG 0.527173 4_2:-66350487 None:intergenic
GAGAGACAAGAATGTTGAAG+AGG 0.528313 4_2:+66345041 Msa0616480:five_prime_UTR
AGCTGGAACCAATAACTTTG+TGG 0.532701 4_2:-66345124 None:intergenic
ATAACAAACCAATTAAGTTG+GGG 0.533368 4_2:+66344894 Msa0616480:five_prime_UTR
TGGAACTCCCTTCTGAAAAG+GGG 0.533991 4_2:+66354693 Msa0616480:three_prime_UTR
AGGCTGCAGATAAATGGTTA+AGG 0.534889 4_2:+66354360 Msa0616480:CDS
CAAGAAGGAGAAACAGGAAG+TGG 0.538321 4_2:-66344758 None:intergenic
GGGTGTATGGAGTGTATGGT+AGG 0.540087 4_2:-66350483 None:intergenic
TCCAGCTCAGTATTTCTCCA+AGG 0.541108 4_2:+66345140 Msa0616480:five_prime_UTR
ACAAATACGGAACATAGTAC+TGG 0.541312 4_2:-66345978 None:intergenic
ACACTCCATACACCCTTGAC+AGG 0.545222 4_2:+66350491 Msa0616480:CDS
GGTACTGCACTGCAATTTGG+TGG 0.551407 4_2:+66344955 Msa0616480:five_prime_UTR
ATTTCATAATTACCTGTCAA+GGG 0.551433 4_2:-66350503 None:intergenic
AGCCATAACCATTTGAGTAG+AGG 0.551847 4_2:+66355124 Msa0616480:three_prime_UTR
GAAATGTCAATACCTTGTCT+TGG 0.552052 4_2:-66346043 None:intergenic
AGTAATGAATTCCCTCGTGC+AGG 0.552196 4_2:+66354340 Msa0616480:CDS
GCCATCACAATCTCTACAGA+TGG 0.553868 4_2:-66354535 None:intergenic
TCACTGGGATAAACCAGTAC+AGG 0.565356 4_2:-66354218 None:intergenic
AAGCCTTAATTTCATTGCCG+TGG 0.572215 4_2:+66354490 Msa0616480:three_prime_UTR
ACCTTGGAGAAATACTGAGC+TGG 0.575271 4_2:-66345141 None:intergenic
GTGATTTATTGCCAAACAGT+TGG 0.575495 4_2:+66350260 Msa0616480:five_prime_UTR
ATTTATCTGCAGCCTGCACG+AGG 0.576191 4_2:-66354352 None:intergenic
AGGCAGCCATTGCAAAAGTA+GGG 0.576587 4_2:-66354268 None:intergenic
GCATGCCAGTTATATTCCCT+CGG 0.577795 4_2:+66354459 Msa0616480:three_prime_UTR
TACAGAGATTCATGTAGTGA+AGG 0.580192 4_2:+66349867 Msa0616480:five_prime_UTR
ACAGATTAACAGAGTATGTG+TGG 0.580632 4_2:+66354753 Msa0616480:three_prime_UTR
AGAAAGGATTGGAAAATGCT+GGG 0.581921 4_2:+66344934 Msa0616480:five_prime_UTR
TGTAGACGACAATGAGAGGT+TGG 0.584962 4_2:+66345833 Msa0616480:intron
TCACAATCTCTACAGATGGA+TGG 0.585462 4_2:-66354531 None:intergenic
AATTTGTAGAAGAGATTGAT+CGG 0.586462 4_2:-66344726 None:intergenic
CTTCTCAATGACATGAGGGC+AGG 0.593498 4_2:-66350235 None:intergenic
ATATGAAACAAAAGTTAAGT+GGG 0.593807 4_2:+66354726 Msa0616480:three_prime_UTR
TGCTCTGATGGTAGGAGAGA+TGG 0.594256 4_2:+66354944 Msa0616480:three_prime_UTR
CTGTAAATACTTGTACAGGT+TGG 0.599629 4_2:-66354783 None:intergenic
GACATTGCCTTGTCAGCCAG+CGG 0.600162 4_2:-66350113 None:intergenic
AGCCATTGCAAAAGTAGGGA+TGG 0.600948 4_2:-66354264 None:intergenic
AAACACAATACAGTACAAGA+AGG 0.603124 4_2:+66350002 Msa0616480:five_prime_UTR
GGATAAACCAGTACAGGACC+AGG 0.604698 4_2:-66354212 None:intergenic
ATTTAAAGAACTGATGATCC+GGG 0.606138 4_2:-66354400 None:intergenic
TATGGGAATCGTTTAAGGAG+TGG 0.610261 4_2:+66345902 Msa0616480:five_prime_UTR
AGCAGTAAACACCTGACAAG+TGG 0.611354 4_2:+66349942 Msa0616480:five_prime_UTR
CATATTGTTGCTCTGATGGT+AGG 0.612255 4_2:+66354936 Msa0616480:three_prime_UTR
CCTATATATCGAATACCCAC+AGG 0.618281 4_2:+66350425 Msa0616480:CDS
CACAACTTCTCAATGACATG+AGG 0.627272 4_2:-66350240 None:intergenic
AAAAGTCGAGTGCCAAGACA+AGG 0.628776 4_2:+66346031 Msa0616480:five_prime_UTR
CAGATTAACAGAGTATGTGT+GGG 0.634579 4_2:+66354754 Msa0616480:three_prime_UTR
GTAGTGATGACAGTGAAACT+GGG 0.640422 4_2:+66350033 Msa0616480:five_prime_UTR
ACTGGTTTATCCCAGTGAGA+TGG 0.640430 4_2:+66354223 Msa0616480:CDS
TAACAAACCAATTAAGTTGG+GGG 0.642221 4_2:+66344895 Msa0616480:five_prime_UTR
TGCTATGTCTATACAAAACG+GGG 0.642330 4_2:-66350329 None:intergenic
CTGTAGAGATTGTGATGGCA+CGG 0.642968 4_2:+66354539 Msa0616480:three_prime_UTR
GGAACTCCCTTCTGAAAAGG+GGG 0.643505 4_2:+66354694 Msa0616480:three_prime_UTR
GCTAGTTCAGGTGAATCACC+CGG 0.646489 4_2:+66354382 Msa0616480:CDS
TTTATGTCCAGAAATTAAAG+GGG 0.653418 4_2:-66354823 None:intergenic
CTTTAATAAAGTTTACACCA+CGG 0.653488 4_2:-66354507 None:intergenic
TACATAAGTGAAGATAGTGA+TGG 0.653910 4_2:+66349837 Msa0616480:five_prime_UTR
ACAACTTCTCAATGACATGA+GGG 0.656739 4_2:-66350239 None:intergenic
GGTACACCATCCATCTCACT+GGG 0.664900 4_2:-66354233 None:intergenic
TCCATCTGTAGAGATTGTGA+TGG 0.666880 4_2:+66354534 Msa0616480:three_prime_UTR
ACCAGTACAGGACCAGGAGT+AGG 0.669545 4_2:-66354206 None:intergenic
ACAGTTGGATGTCTGTTGCA+TGG 0.675268 4_2:+66350275 Msa0616480:five_prime_UTR
CTAGATTTCACTGTGTGGTG+TGG 0.689111 4_2:+66354888 Msa0616480:three_prime_UTR
TTTATCTGCAGCCTGCACGA+GGG 0.693098 4_2:-66354351 None:intergenic
GTTTATCCCAGTGAGATGGA+TGG 0.699701 4_2:+66354227 Msa0616480:CDS
TGTCTGTAGACGACAATGAG+AGG 0.703177 4_2:+66345829 Msa0616480:intron
AAATACTAGATTTCACTGTG+TGG 0.735987 4_2:+66354883 Msa0616480:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACATATGAATAAAAAAA+GGG - chr4_2:66345713-66345732 None:intergenic 10.0%
!! ATAAACATATGAATAAAAAA+AGG - chr4_2:66345714-66345733 None:intergenic 10.0%
!! TTATTATTTATATAATTGGA+TGG + chr4_2:66345730-66345749 Msa0616480:intron 10.0%
!! TAAAATTGCATAAATTATAA+AGG + chr4_2:66348605-66348624 Msa0616480:intron 10.0%
!! AAAATTGCATAAATTATAAA+GGG + chr4_2:66348606-66348625 Msa0616480:intron 10.0%
!!! TTTTCGAAATATAAATTTAT+TGG + chr4_2:66349425-66349444 Msa0616480:intron 10.0%
!!! TAAAATCGTATTTTGAAATT+TGG + chr4_2:66344862-66344881 Msa0616480:five_prime_UTR 15.0%
!!! AAAATCGTATTTTGAAATTT+GGG + chr4_2:66344863-66344882 Msa0616480:five_prime_UTR 15.0%
!!! TTCTAATCCTTAAATTTTAA+GGG - chr4_2:66345335-66345354 None:intergenic 15.0%
!!! TTTCTAATCCTTAAATTTTA+AGG - chr4_2:66345336-66345355 None:intergenic 15.0%
!! AAACTAAAAAGATAATTTGA+AGG + chr4_2:66347323-66347342 Msa0616480:intron 15.0%
!!! ATATCCAATTAAATGTTTTT+AGG + chr4_2:66347616-66347635 Msa0616480:intron 15.0%
!!! TATCCAATTAAATGTTTTTA+GGG + chr4_2:66347617-66347636 Msa0616480:intron 15.0%
!! AATTAGTAGTTAAGTATATT+GGG + chr4_2:66348001-66348020 Msa0616480:intron 15.0%
!!! ATGTTAATGAATGATTTTAA+AGG + chr4_2:66348036-66348055 Msa0616480:intron 15.0%
!! TCAAAAATACACAAAATTAA+AGG - chr4_2:66348090-66348109 None:intergenic 15.0%
!! AAATATTGTACAATATAAGA+TGG - chr4_2:66350185-66350204 None:intergenic 15.0%
!! ATCTTATATTGTACAATATT+TGG + chr4_2:66350184-66350203 Msa0616480:intron 15.0%
!!! TTAACAATAAGAATCTTTTA+AGG - chr4_2:66350650-66350669 None:intergenic 15.0%
!! GTATTATTAAGCAATAAAAA+GGG - chr4_2:66350844-66350863 None:intergenic 15.0%
!! TGTATTATTAAGCAATAAAA+AGG - chr4_2:66350845-66350864 None:intergenic 15.0%
!! ATGATGTTTATCATAATAAA+GGG + chr4_2:66350964-66350983 Msa0616480:intron 15.0%
!!! ATTTTCATAAAAATCTAGAA+AGG - chr4_2:66353797-66353816 None:intergenic 15.0%
!!! TTATATTTCATGTTTTTGAA+AGG - chr4_2:66354130-66354149 None:intergenic 15.0%
!! GAAAAAAGGAATATGTATAA+TGG - chr4_2:66344686-66344705 None:intergenic 20.0%
!! TTATAACAAACCAATTAAGT+TGG + chr4_2:66344892-66344911 Msa0616480:five_prime_UTR 20.0%
!! TATAACAAACCAATTAAGTT+GGG + chr4_2:66344893-66344912 Msa0616480:five_prime_UTR 20.0%
!! CTTTCAAAAAAAAAAAACCT+TGG - chr4_2:66345160-66345179 None:intergenic 20.0%
!!! TTTGAAAGTTTTTGATTTGT+TGG + chr4_2:66345172-66345191 Msa0616480:intron 20.0%
!!! TTTTCTATAATGTGTAACTA+CGG + chr4_2:66345269-66345288 Msa0616480:intron 20.0%
!! ATTTAGTCCCTTAAAATTTA+AGG + chr4_2:66345325-66345344 Msa0616480:intron 20.0%
!! TATTTATATAATTGGATGGA+TGG + chr4_2:66345734-66345753 Msa0616480:intron 20.0%
!!! TTTTGGTTATTATTGTTGTA+TGG + chr4_2:66345779-66345798 Msa0616480:intron 20.0%
!! TGTTATGTAAATTGTTCAAA+TGG + chr4_2:66346206-66346225 Msa0616480:intron 20.0%
!! AGAAAATAGAACAGATAAAT+TGG - chr4_2:66346495-66346514 None:intergenic 20.0%
!!! AGAATTTTATTCACTTTTCT+TGG - chr4_2:66346580-66346599 None:intergenic 20.0%
!!! AAATTGTTCTAAATTTGCTA+CGG + chr4_2:66346730-66346749 Msa0616480:intron 20.0%
!! ATAAAATGATGGCAATTAAA+AGG + chr4_2:66347038-66347057 Msa0616480:intron 20.0%
!! ATTTAATTGGATATAAGAGA+GGG - chr4_2:66347610-66347629 None:intergenic 20.0%
!! GAATTAGTAGTTAAGTATAT+TGG + chr4_2:66348000-66348019 Msa0616480:intron 20.0%
!! TTTGAATTTATGTATACTGT+TGG + chr4_2:66348105-66348124 Msa0616480:intron 20.0%
!! TTGAATTTATGTATACTGTT+GGG + chr4_2:66348106-66348125 Msa0616480:intron 20.0%
!! TCATACAAACATTTAAATGA+AGG + chr4_2:66348326-66348345 Msa0616480:intron 20.0%
!! TACATAACTAGAAATCAATT+TGG + chr4_2:66348698-66348717 Msa0616480:intron 20.0%
!!! AATTAGTTTTTAGTATCAAG+TGG + chr4_2:66349009-66349028 Msa0616480:intron 20.0%
!! TTTAACTGTTTAGATGTAAT+TGG + chr4_2:66349114-66349133 Msa0616480:intron 20.0%
!! TTATCAATCATATAAGAAGA+GGG - chr4_2:66349233-66349252 None:intergenic 20.0%
!! ATTATCAATCATATAAGAAG+AGG - chr4_2:66349234-66349253 None:intergenic 20.0%
!! TCTTCTTATATGATTGATAA+TGG + chr4_2:66349233-66349252 Msa0616480:intron 20.0%
!!! TATATGATTGATAATGGATA+TGG + chr4_2:66349239-66349258 Msa0616480:intron 20.0%
!! GAAAAAAATTTAAGTGTTCT+TGG - chr4_2:66349410-66349429 None:intergenic 20.0%
!! TGAAGTAATAACATATACAT+TGG + chr4_2:66349483-66349502 Msa0616480:intron 20.0%
!!! CATTTTTTATGTCACTTTAT+AGG + chr4_2:66350399-66350418 Msa0616480:exon 20.0%
!!! CATCTAAATCTTTTAAAGTA+GGG - chr4_2:66350451-66350470 None:intergenic 20.0%
!! TTCTTATTGTTAATTAACCT+TGG + chr4_2:66350657-66350676 Msa0616480:intron 20.0%
!! GATGATGTTTATCATAATAA+AGG + chr4_2:66350963-66350982 Msa0616480:intron 20.0%
!! ACTGATATTATATAGGATAA+AGG - chr4_2:66351059-66351078 None:intergenic 20.0%
!! TCAATCTATCAGAATAAAAA+AGG - chr4_2:66351109-66351128 None:intergenic 20.0%
!! AGACAAAAAATGAAATTCAA+TGG - chr4_2:66351162-66351181 None:intergenic 20.0%
!! ATCTGTATTTATAAAAGTTG+AGG - chr4_2:66351225-66351244 None:intergenic 20.0%
!! TTACTTTAGCAAACAAAATA+TGG + chr4_2:66351328-66351347 Msa0616480:intron 20.0%
!! TACTTTAGCAAACAAAATAT+GGG + chr4_2:66351329-66351348 Msa0616480:intron 20.0%
!! ACTAAACAAATTTAGTTACA+AGG + chr4_2:66351477-66351496 Msa0616480:intron 20.0%
!! TCCAAAGACTATTAAATTAT+GGG - chr4_2:66352242-66352261 None:intergenic 20.0%
!! ATCCAAAGACTATTAAATTA+TGG - chr4_2:66352243-66352262 None:intergenic 20.0%
!! AATATACCTTAAAGATATTC+TGG + chr4_2:66352758-66352777 Msa0616480:intron 20.0%
!! AAACTTAATTAAATAGAACG+AGG - chr4_2:66353229-66353248 None:intergenic 20.0%
!! TCGTTCTATTTAATTAAGTT+TGG + chr4_2:66353228-66353247 Msa0616480:intron 20.0%
!! CGTTCTATTTAATTAAGTTT+GGG + chr4_2:66353229-66353248 Msa0616480:intron 20.0%
!! TATCAAAAACTTAAAACTGA+CGG + chr4_2:66353612-66353631 Msa0616480:intron 20.0%
!!! AATAGATCCCTTTAATTTAT+AGG - chr4_2:66354291-66354310 None:intergenic 20.0%
!! ATAAATTAAAGGGATCTATT+TGG + chr4_2:66354291-66354310 Msa0616480:CDS 20.0%
!! TACAAATGAATTGAATGATA+TGG + chr4_2:66354437-66354456 Msa0616480:exon 20.0%
!! GACATTAAAAAGAAAAAAAC+TGG + chr4_2:66354660-66354679 Msa0616480:three_prime_UTR 20.0%
!!! AAAAAACTGGTTTTTATAAG+TGG + chr4_2:66354673-66354692 Msa0616480:three_prime_UTR 20.0%
!! AATATGAAACAAAAGTTAAG+TGG + chr4_2:66354725-66354744 Msa0616480:three_prime_UTR 20.0%
!! ATATGAAACAAAAGTTAAGT+GGG + chr4_2:66354726-66354745 Msa0616480:three_prime_UTR 20.0%
!! AAGTATTTACAGTTCAATAA+TGG + chr4_2:66354794-66354813 Msa0616480:three_prime_UTR 20.0%
!! ATTTATGTCCAGAAATTAAA+GGG - chr4_2:66354827-66354846 None:intergenic 20.0%
!! TATTTATGTCCAGAAATTAA+AGG - chr4_2:66354828-66354847 None:intergenic 20.0%
!! TATACTAACATACAAAGATT+TGG - chr4_2:66355014-66355033 None:intergenic 20.0%
!! ATTGTTATATATCTTAACTC+TGG + chr4_2:66355095-66355114 Msa0616480:three_prime_UTR 20.0%
!! TTCTCTCTCTTATTTAGTTT+AGG - chr4_2:66344633-66344652 None:intergenic 25.0%
! ATGATTGAAAGGAAGAAAAA+AGG - chr4_2:66344700-66344719 None:intergenic 25.0%
! AATTTGTAGAAGAGATTGAT+CGG - chr4_2:66344729-66344748 None:intergenic 25.0%
!! ATAACAAACCAATTAAGTTG+GGG + chr4_2:66344894-66344913 Msa0616480:five_prime_UTR 25.0%
! AAGAAAAATTTGCGAAAGAA+AGG + chr4_2:66344918-66344937 Msa0616480:five_prime_UTR 25.0%
!!! TGATTGATAAATCACTTTTG+CGG + chr4_2:66345548-66345567 Msa0616480:intron 25.0%
!!! ACATAGAATCTTTAAAATCG+TGG + chr4_2:66345578-66345597 Msa0616480:intron 25.0%
!!! ACTAAAATGACTGATTTTGT+AGG + chr4_2:66345619-66345638 Msa0616480:intron 25.0%
!! ATTTTGTAGGACTAAATTGA+TGG + chr4_2:66345632-66345651 Msa0616480:intron 25.0%
!!! AGATTATGTTTTGTTGTTGT+TGG + chr4_2:66346239-66346258 Msa0616480:intron 25.0%
!! TTTTACAAAAGACCAAGTAA+CGG - chr4_2:66346446-66346465 None:intergenic 25.0%
!! ATATTCTTCATTTTCCTTGA+GGG + chr4_2:66346604-66346623 Msa0616480:intron 25.0%
!! TAAACCATTTTGCTGAAATT+CGG + chr4_2:66346800-66346819 Msa0616480:intron 25.0%
! ATGACTTTCTACTATACAAA+AGG - chr4_2:66346929-66346948 None:intergenic 25.0%
!! AATTGCCATCATTTTATACT+CGG - chr4_2:66347035-66347054 None:intergenic 25.0%
! AATTAAAAGGTGAAAAGCAA+AGG + chr4_2:66347051-66347070 Msa0616480:intron 25.0%
! GATGAATAAAGTGATTAGAA+AGG + chr4_2:66347140-66347159 Msa0616480:intron 25.0%
! AATTCCTTATAACCTTAACT+TGG - chr4_2:66347245-66347264 None:intergenic 25.0%
! TTTGAAGGTTTATTGTCATT+AGG + chr4_2:66347338-66347357 Msa0616480:intron 25.0%
!! CTTTTTACAACATTGGATTT+CGG - chr4_2:66347427-66347446 None:intergenic 25.0%
! CATTTAATTGGATATAAGAG+AGG - chr4_2:66347611-66347630 None:intergenic 25.0%
! TAAGGAAACTTACTGAAATT+GGG - chr4_2:66347657-66347676 None:intergenic 25.0%
! TATGCAATTTATTGTTGTCA+CGG - chr4_2:66347754-66347773 None:intergenic 25.0%
! AATACACAAAATTAAAGGAG+TGG - chr4_2:66348085-66348104 None:intergenic 25.0%
! TGAATTTATGTATACTGTTG+GGG + chr4_2:66348107-66348126 Msa0616480:intron 25.0%
! TTCTAATGTTCTTGAAGATA+GGG - chr4_2:66348580-66348599 None:intergenic 25.0%
! TTTCTAATGTTCTTGAAGAT+AGG - chr4_2:66348581-66348600 None:intergenic 25.0%
! AACTATTAAGAGAGATTTAG+AGG + chr4_2:66348731-66348750 Msa0616480:intron 25.0%
! TGTAATTGGTTGAAAAAGTT+TGG + chr4_2:66349128-66349147 Msa0616480:intron 25.0%
!! ATCATTCTTTTTATTGCTTC+AGG + chr4_2:66349285-66349304 Msa0616480:intron 25.0%
!! TCATTCTTTTTATTGCTTCA+GGG + chr4_2:66349286-66349305 Msa0616480:intron 25.0%
! AAAATTGTATGGAATGAAGA+GGG - chr4_2:66349379-66349398 None:intergenic 25.0%
! AATTTAAGTGTTCTTGGTTA+GGG - chr4_2:66349404-66349423 None:intergenic 25.0%
! AAATTTAAGTGTTCTTGGTT+AGG - chr4_2:66349405-66349424 None:intergenic 25.0%
!! CATTTTAGATCTCAATGTAT+TGG + chr4_2:66349536-66349555 Msa0616480:intron 25.0%
! CAAAATAAAAGTCACTAAGT+TGG - chr4_2:66349650-66349669 None:intergenic 25.0%
! AGTTATAATTGCAAAGAAGT+AGG - chr4_2:66349700-66349719 None:intergenic 25.0%
!! GTCTGATCTTAATTAATTTG+TGG + chr4_2:66350133-66350152 Msa0616480:intron 25.0%
! GAAAAAAAGGAAAGAAGTTA+AGG - chr4_2:66350310-66350329 None:intergenic 25.0%
!!! ATTAGTGCTGTTTTTTTTGT+TGG + chr4_2:66350372-66350391 Msa0616480:five_prime_UTR 25.0%
!!! GCATCTAAATCTTTTAAAGT+AGG - chr4_2:66350452-66350471 None:intergenic 25.0%
! ATTTCATAATTACCTGTCAA+GGG - chr4_2:66350506-66350525 None:intergenic 25.0%
! AATTTCATAATTACCTGTCA+AGG - chr4_2:66350507-66350526 None:intergenic 25.0%
!! GCTTTATACAACACTTATTT+TGG + chr4_2:66350559-66350578 Msa0616480:intron 25.0%
! TGAATGAATGTCACATTATT+TGG + chr4_2:66350623-66350642 Msa0616480:intron 25.0%
!! ATAATACAGTGTTATTGTGT+CGG + chr4_2:66350857-66350876 Msa0616480:intron 25.0%
! ATTGTATATGTCCAACAATA+AGG + chr4_2:66350931-66350950 Msa0616480:intron 25.0%
! TTGTATATGTCCAACAATAA+GGG + chr4_2:66350932-66350951 Msa0616480:intron 25.0%
! TATGATAAACATCATCAAGT+TGG - chr4_2:66350959-66350978 None:intergenic 25.0%
! ATCATAATAAAGGGATTAAG+TGG + chr4_2:66350973-66350992 Msa0616480:intron 25.0%
! AGTTCAGACTGATATTATAT+AGG - chr4_2:66351066-66351085 None:intergenic 25.0%
! ATATAATATCAGTCTGAACT+CGG + chr4_2:66351066-66351085 Msa0616480:intron 25.0%
! TATTCTGATAGATTGAACAA+TGG + chr4_2:66351113-66351132 Msa0616480:intron 25.0%
! ATTCTGATAGATTGAACAAT+GGG + chr4_2:66351114-66351133 Msa0616480:intron 25.0%
! GAACACTATAAATTTCGTTT+AGG + chr4_2:66351286-66351305 Msa0616480:intron 25.0%
! ATGATTTCATACAATGAGAT+CGG - chr4_2:66351531-66351550 None:intergenic 25.0%
! CAAAGACTATTAAATTATGG+GGG - chr4_2:66352240-66352259 None:intergenic 25.0%
! CCAAAGACTATTAAATTATG+GGG - chr4_2:66352241-66352260 None:intergenic 25.0%
! GCAATTTAATGTCTTGATTA+TGG - chr4_2:66352351-66352370 None:intergenic 25.0%
!! TTGCTTAAGAAAGGAAATTT+TGG - chr4_2:66352632-66352651 None:intergenic 25.0%
! AAAATTTCCTTTCTTAAGCA+AGG + chr4_2:66352631-66352650 Msa0616480:intron 25.0%
!!! TATATTTCTCAATGGATTGA+AGG - chr4_2:66352744-66352763 None:intergenic 25.0%
!!! CTTTAAGGTATATTTCTCAA+TGG - chr4_2:66352752-66352771 None:intergenic 25.0%
! AAACATCAAAGAACTATTAC+TGG - chr4_2:66353009-66353028 None:intergenic 25.0%
! AGTAATAGTTCTTTGATGTT+TGG + chr4_2:66353008-66353027 Msa0616480:intron 25.0%
! TTAATTAAATAGAACGAGGA+TGG - chr4_2:66353225-66353244 None:intergenic 25.0%
!!! TTTTAAAGCACAAACCTTAA+TGG - chr4_2:66353342-66353361 None:intergenic 25.0%
! TAAGCAGTAATTTCTTCATT+TGG - chr4_2:66353379-66353398 None:intergenic 25.0%
! AAACCAAACCAAAACAATAT+TGG + chr4_2:66353563-66353582 Msa0616480:intron 25.0%
!!! GTCAGTTTTAAGTTTTTGAT+AGG - chr4_2:66353613-66353632 None:intergenic 25.0%
! ATAATCCTTCATAAGAAATG+TGG - chr4_2:66353973-66353992 None:intergenic 25.0%
!!! ATTTCATGTTTTTGAAAGGA+TGG - chr4_2:66354126-66354145 None:intergenic 25.0%
! CTTTAATAAAGTTTACACCA+CGG - chr4_2:66354510-66354529 None:intergenic 25.0%
! TATAAGAAAAACCTACAACT+AGG - chr4_2:66354574-66354593 None:intergenic 25.0%
!! TCTTTTTAATGTCTTCTCTT+TGG - chr4_2:66354653-66354672 None:intergenic 25.0%
! TTTATGTCCAGAAATTAAAG+GGG - chr4_2:66354826-66354845 None:intergenic 25.0%
! GTTGTGATAATAGAAGAAAA+TGG + chr4_2:66354857-66354876 Msa0616480:three_prime_UTR 25.0%
AAAAAGTTGAGGAAAAAGAG+AGG - chr4_2:66344786-66344805 None:intergenic 30.0%
!!! TTTCCCAATACCATTTTTTC+TGG + chr4_2:66344803-66344822 Msa0616480:five_prime_UTR 30.0%
!!! TTCCCAATACCATTTTTTCT+GGG + chr4_2:66344804-66344823 Msa0616480:five_prime_UTR 30.0%
AACCCAGAAAAAATGGTATT+GGG - chr4_2:66344809-66344828 None:intergenic 30.0%
AAACCCAGAAAAAATGGTAT+TGG - chr4_2:66344810-66344829 None:intergenic 30.0%
!! TAACAAACCAATTAAGTTGG+GGG + chr4_2:66344895-66344914 Msa0616480:five_prime_UTR 30.0%
AAATTTGCGAAAGAAAGGAT+TGG + chr4_2:66344923-66344942 Msa0616480:five_prime_UTR 30.0%
AGTCTGTTAGTAACATTGAT+AGG + chr4_2:66345091-66345110 Msa0616480:five_prime_UTR 30.0%
TAGTAACATTGATAGGTTCT+TGG + chr4_2:66345098-66345117 Msa0616480:five_prime_UTR 30.0%
!!! GTTTTTGTTTTGATTGCACT+TGG + chr4_2:66345241-66345260 Msa0616480:intron 30.0%
ATGAATGTAAGTACATGTGT+CGG + chr4_2:66345436-66345455 Msa0616480:intron 30.0%
!!! CGTTTTTAATTTAAGAGCAC+CGG - chr4_2:66345523-66345542 None:intergenic 30.0%
TTAAAATCGTGGTGATAGAT+TGG + chr4_2:66345589-66345608 Msa0616480:intron 30.0%
! AGTTTGATTGTGGTGAATTT+TGG + chr4_2:66345762-66345781 Msa0616480:intron 30.0%
! AGTTTAGTTGTTGATAGATG+TGG + chr4_2:66346145-66346164 Msa0616480:intron 30.0%
!! TTTGTTGTTGTTGGTTGAAA+AGG + chr4_2:66346248-66346267 Msa0616480:intron 30.0%
CTTGTGATATATCTACTGAT+GGG + chr4_2:66346344-66346363 Msa0616480:intron 30.0%
! AGTAACGGAATGTATAAAAG+AGG - chr4_2:66346431-66346450 None:intergenic 30.0%
! CTTTTATACATTCCGTTACT+TGG + chr4_2:66346431-66346450 Msa0616480:intron 30.0%
! GATATTCTTCATTTTCCTTG+AGG + chr4_2:66346603-66346622 Msa0616480:intron 30.0%
GATATTGAAACCACAAGTTT+AGG + chr4_2:66346656-66346675 Msa0616480:intron 30.0%
! AAGTTTAGGATTTCACTCAT+AGG + chr4_2:66346670-66346689 Msa0616480:intron 30.0%
ACAACCAAGTTAAGGTTATA+AGG + chr4_2:66347238-66347257 Msa0616480:intron 30.0%
TTGTCATTAGGAACCAAATT+AGG + chr4_2:66347350-66347369 Msa0616480:intron 30.0%
TGTCATTAGGAACCAAATTA+GGG + chr4_2:66347351-66347370 Msa0616480:intron 30.0%
!! TCTATAGACTTGCTAAAAGT+AGG + chr4_2:66347384-66347403 Msa0616480:intron 30.0%
!! CTATAGACTTGCTAAAAGTA+GGG + chr4_2:66347385-66347404 Msa0616480:intron 30.0%
! AGCATCTCTTTTTACAACAT+TGG - chr4_2:66347434-66347453 None:intergenic 30.0%
ATATAAGAGAGGGTCAAAAA+GGG - chr4_2:66347600-66347619 None:intergenic 30.0%
GAAATTGGGAAATGGTAAAA+CGG - chr4_2:66347643-66347662 None:intergenic 30.0%
AACTTACTGAAATTGGGAAA+TGG - chr4_2:66347651-66347670 None:intergenic 30.0%
GTAAGGAAACTTACTGAAAT+TGG - chr4_2:66347658-66347677 None:intergenic 30.0%
GACAACAATAAATTGCATAG+CGG + chr4_2:66347755-66347774 Msa0616480:intron 30.0%
! TATACCACTTTAGTGGTTTT+GGG + chr4_2:66348191-66348210 Msa0616480:intron 30.0%
! CTAAGAGCATGTTAATTGAA+TGG + chr4_2:66348538-66348557 Msa0616480:intron 30.0%
TAGTCGTACTATGAATCTTT+AGG + chr4_2:66348640-66348659 Msa0616480:intron 30.0%
AAGAGAGATTTAGAGGTAAA+TGG + chr4_2:66348738-66348757 Msa0616480:intron 30.0%
!!! TTTTTTATACACTCTTCCAG+CGG - chr4_2:66349158-66349177 None:intergenic 30.0%
! AAAAAAAAAGTGTGTGTGTG+AGG + chr4_2:66349173-66349192 Msa0616480:intron 30.0%
GATATCTACTACATATCTAC+TGG - chr4_2:66349337-66349356 None:intergenic 30.0%
GAAAATTGTATGGAATGAAG+AGG - chr4_2:66349380-66349399 None:intergenic 30.0%
CTCAATGTATTGGATATGAT+AGG + chr4_2:66349546-66349565 Msa0616480:intron 30.0%
TATAGGATTCAAATCACGAA+TGG - chr4_2:66349746-66349765 None:intergenic 30.0%
! TATGATTTTCCCATGTCATT+AGG + chr4_2:66349814-66349833 Msa0616480:intron 30.0%
ACTTATGTACCTAATGACAT+GGG - chr4_2:66349826-66349845 None:intergenic 30.0%
TACATAAGTGAAGATAGTGA+TGG + chr4_2:66349837-66349856 Msa0616480:five_prime_UTR 30.0%
AAACACAATACAGTACAAGA+AGG + chr4_2:66350002-66350021 Msa0616480:five_prime_UTR 30.0%
!!! AGAACTGCTTTTTCAGTATT+TGG + chr4_2:66350064-66350083 Msa0616480:five_prime_UTR 30.0%
!!! CTTTTTCAGTATTTGGAACA+AGG + chr4_2:66350071-66350090 Msa0616480:five_prime_UTR 30.0%
TATACAAAACGGGGAAAAAA+AGG - chr4_2:66350323-66350342 None:intergenic 30.0%
TTGCTATGTCTATACAAAAC+GGG - chr4_2:66350333-66350352 None:intergenic 30.0%
! CTTGCTATGTCTATACAAAA+CGG - chr4_2:66350334-66350353 None:intergenic 30.0%
ATGTGACATTCATTCAACTT+TGG - chr4_2:66350619-66350638 None:intergenic 30.0%
ATTCAATGGATACAAGTCAT+TGG - chr4_2:66351148-66351167 None:intergenic 30.0%
CGAACACATAAAGAAGAATA+TGG - chr4_2:66351249-66351268 None:intergenic 30.0%
TAAACTAACTCAAGTTAGCT+AGG - chr4_2:66351433-66351452 None:intergenic 30.0%
AAGAAAAAAAACTACAGAGC+GGG - chr4_2:66351599-66351618 None:intergenic 30.0%
GAAGAAAAAAAACTACAGAG+CGG - chr4_2:66351600-66351619 None:intergenic 30.0%
!! TTTGAGTTGTATCCTTGATA+AGG - chr4_2:66351661-66351680 None:intergenic 30.0%
TCTTGGAAACAACAAATTGA+AGG + chr4_2:66351788-66351807 Msa0616480:intron 30.0%
CCCCATAATTTAATAGTCTT+TGG + chr4_2:66352238-66352257 Msa0616480:intron 30.0%
! TAGAAAGTTGGAGATTTTTG+AGG + chr4_2:66352270-66352289 Msa0616480:intron 30.0%
TAAGTCACAGTTCTATTAGA+GGG + chr4_2:66352572-66352591 Msa0616480:intron 30.0%
GAAGAACCAGAATATCTTTA+AGG - chr4_2:66352767-66352786 None:intergenic 30.0%
! TACAGGCTTTAATACATTGT+TGG + chr4_2:66352872-66352891 Msa0616480:intron 30.0%
! ACAGGCTTTAATACATTGTT+GGG + chr4_2:66352873-66352892 Msa0616480:intron 30.0%
! ATGCATTAAAGCTCTAACTT+GGG - chr4_2:66352907-66352926 None:intergenic 30.0%
! AATGCATTAAAGCTCTAACT+TGG - chr4_2:66352908-66352927 None:intergenic 30.0%
CAAAGAACTATTACTGGTAT+TGG - chr4_2:66353003-66353022 None:intergenic 30.0%
TCACAAATAACCAATCCTTT+AGG + chr4_2:66353134-66353153 Msa0616480:intron 30.0%
!! TTTTGATGTTGGTTAGGTTT+GGG - chr4_2:66353180-66353199 None:intergenic 30.0%
!! ATTTTGATGTTGGTTAGGTT+TGG - chr4_2:66353181-66353200 None:intergenic 30.0%
!!! CAGTTATTTTGATGTTGGTT+AGG - chr4_2:66353186-66353205 None:intergenic 30.0%
!!! CCATTCAGTTATTTTGATGT+TGG - chr4_2:66353191-66353210 None:intergenic 30.0%
CCAACATCAAAATAACTGAA+TGG + chr4_2:66353188-66353207 Msa0616480:intron 30.0%
ATTTAATTAAGTTTGGGCCT+TGG + chr4_2:66353235-66353254 Msa0616480:intron 30.0%
TTTAATTAAGTTTGGGCCTT+GGG + chr4_2:66353236-66353255 Msa0616480:intron 30.0%
!!! GTATCAATTTTGGTTCGAAT+TGG - chr4_2:66353491-66353510 None:intergenic 30.0%
ATTCGAACCAAAATTGATAC+TGG + chr4_2:66353491-66353510 Msa0616480:intron 30.0%
TTCGAACCAAAATTGATACT+GGG + chr4_2:66353492-66353511 Msa0616480:intron 30.0%
!!! GATCCAATATTGTTTTGGTT+TGG - chr4_2:66353569-66353588 None:intergenic 30.0%
TGTAACCACATTTCTTATGA+AGG + chr4_2:66353965-66353984 Msa0616480:intron 30.0%
! TAACACATCACTCAATTTTC+TGG + chr4_2:66354072-66354091 Msa0616480:intron 30.0%
AAAGTAGGGATGGAAATATT+TGG - chr4_2:66354257-66354276 None:intergenic 30.0%
AATGGCTGCCTATAAATTAA+AGG + chr4_2:66354280-66354299 Msa0616480:CDS 30.0%
ATGGCTGCCTATAAATTAAA+GGG + chr4_2:66354281-66354300 Msa0616480:CDS 30.0%
ATTTAAAGAACTGATGATCC+GGG - chr4_2:66354403-66354422 None:intergenic 30.0%
GATTTAAAGAACTGATGATC+CGG - chr4_2:66354404-66354423 None:intergenic 30.0%
TGAACTGTAAATACTTGTAC+AGG - chr4_2:66354790-66354809 None:intergenic 30.0%
AAATACTAGATTTCACTGTG+TGG + chr4_2:66354883-66354902 Msa0616480:three_prime_UTR 30.0%
GTGTTATGTAACTATGTTGT+TGG + chr4_2:66355039-66355058 Msa0616480:three_prime_UTR 30.0%
GTTTATTTCCTCTACTCAAA+TGG - chr4_2:66355135-66355154 None:intergenic 30.0%
!! ATCGGTAATGGATGATTGAA+AGG - chr4_2:66344711-66344730 None:intergenic 35.0%
TAGAAGAGATTGATCGGTAA+TGG - chr4_2:66344723-66344742 None:intergenic 35.0%
! ATGGTATTGGGAAAAAGTTG+AGG - chr4_2:66344797-66344816 None:intergenic 35.0%
TGAACGAAACCCAGAAAAAA+TGG - chr4_2:66344816-66344835 None:intergenic 35.0%
! TTTTCTTCCCCCAACTTAAT+TGG - chr4_2:66344905-66344924 None:intergenic 35.0%
AAGAAAGGATTGGAAAATGC+TGG + chr4_2:66344933-66344952 Msa0616480:five_prime_UTR 35.0%
AGAAAGGATTGGAAAATGCT+GGG + chr4_2:66344934-66344953 Msa0616480:five_prime_UTR 35.0%
!! TGATGATCGGTTTTACATTC+CGG + chr4_2:66344978-66344997 Msa0616480:five_prime_UTR 35.0%
TGATTCTTTCTTGTCTTCAC+CGG - chr4_2:66345000-66345019 None:intergenic 35.0%
CTTGGATTCCACAAAGTTAT+TGG + chr4_2:66345116-66345135 Msa0616480:five_prime_UTR 35.0%
GATGGTACAAAGTTTGATTG+TGG + chr4_2:66345752-66345771 Msa0616480:intron 35.0%
! ACTTTGCTCTGAATGATCTA+TGG + chr4_2:66345884-66345903 Msa0616480:five_prime_UTR 35.0%
! CTTTGCTCTGAATGATCTAT+GGG + chr4_2:66345885-66345904 Msa0616480:five_prime_UTR 35.0%
TGATCTATGGGAATCGTTTA+AGG + chr4_2:66345897-66345916 Msa0616480:five_prime_UTR 35.0%
TCCCTTTACTACTTGATCAA+AGG + chr4_2:66345944-66345963 Msa0616480:five_prime_UTR 35.0%
CCCTTTGATCAAGTAGTAAA+GGG - chr4_2:66345948-66345967 None:intergenic 35.0%
CCCTTTACTACTTGATCAAA+GGG + chr4_2:66345945-66345964 Msa0616480:five_prime_UTR 35.0%
TCCCTTTGATCAAGTAGTAA+AGG - chr4_2:66345949-66345968 None:intergenic 35.0%
ACAAATACGGAACATAGTAC+TGG - chr4_2:66345981-66346000 None:intergenic 35.0%
GTACTATGTTCCGTATTTGT+CGG + chr4_2:66345981-66346000 Msa0616480:five_prime_UTR 35.0%
GAAATGTCAATACCTTGTCT+TGG - chr4_2:66346046-66346065 None:intergenic 35.0%
! TTTAAGACAACACTAACTGC+TGG + chr4_2:66346121-66346140 Msa0616480:intron 35.0%
GCTTGTGATATATCTACTGA+TGG + chr4_2:66346343-66346362 Msa0616480:intron 35.0%
! ATTTTCTCTCCCTGTGATTT+TGG + chr4_2:66346508-66346527 Msa0616480:intron 35.0%
! ATTTTGCTGCCAAAATCACA+GGG - chr4_2:66346520-66346539 None:intergenic 35.0%
! AATTTTGCTGCCAAAATCAC+AGG - chr4_2:66346521-66346540 None:intergenic 35.0%
TGAGTGAAATCCTAAACTTG+TGG - chr4_2:66346669-66346688 None:intergenic 35.0%
TCTTCCGAATTTCAGCAAAA+TGG - chr4_2:66346807-66346826 None:intergenic 35.0%
! ACTGCTCAACATAGTGTTTT+GGG + chr4_2:66346960-66346979 Msa0616480:intron 35.0%
!! TCAACATAGTGTTTTGGGTA+TGG + chr4_2:66346965-66346984 Msa0616480:intron 35.0%
ACACTCCGAGTATAAAATGA+TGG + chr4_2:66347027-66347046 Msa0616480:intron 35.0%
GACAACATACAACCAAGTTA+AGG + chr4_2:66347230-66347249 Msa0616480:intron 35.0%
GTCATTAGGAACCAAATTAG+GGG + chr4_2:66347352-66347371 Msa0616480:intron 35.0%
ACCATTTAACAGCCACTAAA+GGG - chr4_2:66347563-66347582 None:intergenic 35.0%
AACCATTTAACAGCCACTAA+AGG - chr4_2:66347564-66347583 None:intergenic 35.0%
GATATAAGAGAGGGTCAAAA+AGG - chr4_2:66347601-66347620 None:intergenic 35.0%
CGGCCCTAAAAACATTTAAT+TGG - chr4_2:66347623-66347642 None:intergenic 35.0%
ATTGAGTGAGAAGAGATGTA+AGG - chr4_2:66347675-66347694 None:intergenic 35.0%
CTAGAAACAACAACGAGAAA+GGG - chr4_2:66347849-66347868 None:intergenic 35.0%
TACGCAAACGTCAAAAAACA+GGG - chr4_2:66347880-66347899 None:intergenic 35.0%
ATACGCAAACGTCAAAAAAC+AGG - chr4_2:66347881-66347900 None:intergenic 35.0%
TATCCACTATACCACTTTAG+TGG + chr4_2:66348184-66348203 Msa0616480:intron 35.0%
AAACCACTAAAGTGGTATAG+TGG - chr4_2:66348190-66348209 None:intergenic 35.0%
! CTATACCACTTTAGTGGTTT+TGG + chr4_2:66348190-66348209 Msa0616480:intron 35.0%
!! ATACCACTTTAGTGGTTTTG+GGG + chr4_2:66348192-66348211 Msa0616480:intron 35.0%
CATGAATATGAGATGCATTC+AGG + chr4_2:66348250-66348269 Msa0616480:intron 35.0%
AGGATGATGCCGAAAATTAT+TGG + chr4_2:66348270-66348289 Msa0616480:intron 35.0%
! GTTCAGCGACCAATAATTTT+CGG - chr4_2:66348282-66348301 None:intergenic 35.0%
AGAGCATGTTAATTGAATGG+TGG + chr4_2:66348541-66348560 Msa0616480:intron 35.0%
! TCTTTAGGAGAGAGTAATTG+AGG + chr4_2:66348655-66348674 Msa0616480:intron 35.0%
! CTTTAGGAGAGAGTAATTGA+GGG + chr4_2:66348656-66348675 Msa0616480:intron 35.0%
TTTAGGAGAGAGTAATTGAG+GGG + chr4_2:66348657-66348676 Msa0616480:intron 35.0%
TGTAACCTTAATACACACAC+AGG + chr4_2:66348767-66348786 Msa0616480:intron 35.0%
GTAACCTTAATACACACACA+GGG + chr4_2:66348768-66348787 Msa0616480:intron 35.0%
!!! CCTGCTTTTTATTAACAGCT+TGG - chr4_2:66348919-66348938 None:intergenic 35.0%
CCAAGCTGTTAATAAAAAGC+AGG + chr4_2:66348916-66348935 Msa0616480:intron 35.0%
!! TTCTTCAGCAGCAGTTTTAT+TGG + chr4_2:66348960-66348979 Msa0616480:intron 35.0%
!!! TCTTCAGCAGCAGTTTTATT+GGG + chr4_2:66348961-66348980 Msa0616480:intron 35.0%
TGGTTAGGGTGAAAATTGTA+TGG - chr4_2:66349390-66349409 None:intergenic 35.0%
TGACTACATACAAGAATCAG+TGG - chr4_2:66349619-66349638 None:intergenic 35.0%
TATAACTTCTGATCAGCGTT+AGG + chr4_2:66349713-66349732 Msa0616480:intron 35.0%
TTGAATCCTATAGATGCACT+TGG + chr4_2:66349754-66349773 Msa0616480:intron 35.0%
GGTAGCTATTAGTTATGCAT+TGG + chr4_2:66349775-66349794 Msa0616480:intron 35.0%
ATGGGAAAATCATATCTGGT+TGG - chr4_2:66349808-66349827 None:intergenic 35.0%
TGACATGGGAAAATCATATC+TGG - chr4_2:66349812-66349831 None:intergenic 35.0%
CACTTATGTACCTAATGACA+TGG - chr4_2:66349827-66349846 None:intergenic 35.0%
TACAGAGATTCATGTAGTGA+AGG + chr4_2:66349867-66349886 Msa0616480:five_prime_UTR 35.0%
TACTGAAAAAGCAGTTCTTG+AGG - chr4_2:66350062-66350081 None:intergenic 35.0%
!! CAATATAAGATGGACTGTTC+AGG - chr4_2:66350175-66350194 None:intergenic 35.0%
ACAACTTCTCAATGACATGA+GGG - chr4_2:66350242-66350261 None:intergenic 35.0%
GTGATTTATTGCCAAACAGT+TGG + chr4_2:66350260-66350279 Msa0616480:five_prime_UTR 35.0%
TGCTATGTCTATACAAAACG+GGG - chr4_2:66350332-66350351 None:intergenic 35.0%
TAAAGTTGTTGTCATGTGAC+TGG + chr4_2:66350689-66350708 Msa0616480:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG - chr4_2:66350744-66350763 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + chr4_2:66350744-66350763 Msa0616480:intron 35.0%
!! TTTGATTTGCCCATGCTTAA+GGG - chr4_2:66350911-66350930 None:intergenic 35.0%
!!! TTTTGATTTGCCCATGCTTA+AGG - chr4_2:66350912-66350931 None:intergenic 35.0%
AATTAAAGCGAAGATGCTTG+TGG + chr4_2:66351010-66351029 Msa0616480:intron 35.0%
TTAGCAAACAAAATATGGGC+TGG + chr4_2:66351333-66351352 Msa0616480:intron 35.0%
TAGCAAACAAAATATGGGCT+GGG + chr4_2:66351334-66351353 Msa0616480:intron 35.0%
GAATATGTCATTCAGTTCCA+GGG - chr4_2:66351390-66351409 None:intergenic 35.0%
GGACAACTGAATAACAGATT+TGG - chr4_2:66351412-66351431 None:intergenic 35.0%
! GTTACAAGGTCTAAGAGTAT+CGG + chr4_2:66351491-66351510 Msa0616480:intron 35.0%
AGAAAAAAAACTACAGAGCG+GGG - chr4_2:66351598-66351617 None:intergenic 35.0%
! TTTTTCCCTCCTTTCTATCA+TGG + chr4_2:66351623-66351642 Msa0616480:intron 35.0%
TCTATGATGCCATGATAGAA+AGG - chr4_2:66351635-66351654 None:intergenic 35.0%
! CAAAATCAAACTGATTCCTC+TGG + chr4_2:66351677-66351696 Msa0616480:intron 35.0%
ATGAGAACAATTTCCTCTCT+TGG + chr4_2:66351771-66351790 Msa0616480:intron 35.0%
!! CAATTTGTTGTTTCCAAGAG+AGG - chr4_2:66351787-66351806 None:intergenic 35.0%
!! TAGAGGAGCATTTGGATTAA+CGG - chr4_2:66351844-66351863 None:intergenic 35.0%
!! AGTTCAAAGAGGTATCTTAG+AGG - chr4_2:66351861-66351880 None:intergenic 35.0%
! GATTGCAATCTAGTTCAAAG+AGG - chr4_2:66351872-66351891 None:intergenic 35.0%
CTTTGAACTAGATTGCAATC+AGG + chr4_2:66351872-66351891 Msa0616480:intron 35.0%
AAGAAGTCACGTAAAGAACA+AGG - chr4_2:66351940-66351959 None:intergenic 35.0%
! AAGAAACGAGTCTTATAGAG+TGG - chr4_2:66351964-66351983 None:intergenic 35.0%
TTAGTTGAATCCATCACCAA+GGG + chr4_2:66352078-66352097 Msa0616480:intron 35.0%
!! CACAAGCTAATCATTTTGGT+GGG - chr4_2:66352206-66352225 None:intergenic 35.0%
! ACACAAGCTAATCATTTTGG+TGG - chr4_2:66352207-66352226 None:intergenic 35.0%
TAAATTATGGGGGATACTGA+GGG - chr4_2:66352230-66352249 None:intergenic 35.0%
TTAAATTATGGGGGATACTG+AGG - chr4_2:66352231-66352250 None:intergenic 35.0%
TGGATGTGAATCTAGAAAGT+TGG + chr4_2:66352258-66352277 Msa0616480:intron 35.0%
TGATGAAAGATTTGTGGTCT+AGG - chr4_2:66352392-66352411 None:intergenic 35.0%
CCATTGTGATGAAAGATTTG+TGG - chr4_2:66352398-66352417 None:intergenic 35.0%
CCACAAATCTTTCATCACAA+TGG + chr4_2:66352395-66352414 Msa0616480:intron 35.0%
CAAATCTTTCATCACAATGG+AGG + chr4_2:66352398-66352417 Msa0616480:intron 35.0%
!! AAAGGCACAAGTACTTTTAG+AGG - chr4_2:66352484-66352503 None:intergenic 35.0%
CTCTAATAGAACTGTGACTT+AGG - chr4_2:66352573-66352592 None:intergenic 35.0%
CTAAGTCACAGTTCTATTAG+AGG + chr4_2:66352571-66352590 Msa0616480:intron 35.0%
TATTAGAGGGAAAATGCCTT+GGG + chr4_2:66352585-66352604 Msa0616480:intron 35.0%
AAGAATGCCTTGCTTAAGAA+AGG - chr4_2:66352641-66352660 None:intergenic 35.0%
CACGAGCAATTCAAATTGTA+CGG - chr4_2:66352806-66352825 None:intergenic 35.0%
TTGCTCGTGATATTCTTCAA+CGG + chr4_2:66352817-66352836 Msa0616480:intron 35.0%
! TATTACTGGTATTGGAGCAT+CGG - chr4_2:66352995-66353014 None:intergenic 35.0%
CTCTCTAATTCCTAAAGGAT+TGG - chr4_2:66353147-66353166 None:intergenic 35.0%
TTAATTGTCCTAGCATTCGT+TGG - chr4_2:66353319-66353338 None:intergenic 35.0%
GCTAGGACAATTAACCATTA+AGG + chr4_2:66353325-66353344 Msa0616480:intron 35.0%
TTTCATGAACAGCAGACAAA+CGG + chr4_2:66353400-66353419 Msa0616480:intron 35.0%
!! GTTGTGACATCTTCTAGTTT+GGG - chr4_2:66353466-66353485 None:intergenic 35.0%
! AGTTGTGACATCTTCTAGTT+TGG - chr4_2:66353467-66353486 None:intergenic 35.0%
!! GTGCTGATCCAATATTGTTT+TGG - chr4_2:66353574-66353593 None:intergenic 35.0%
CAAAAACTTAAAACTGACGG+TGG + chr4_2:66353615-66353634 Msa0616480:intron 35.0%
CTCAATTTATCATTCCGATC+TGG - chr4_2:66353662-66353681 None:intergenic 35.0%
CAGATCGGAATGATAAATTG+AGG + chr4_2:66353660-66353679 Msa0616480:intron 35.0%
AGAATTTCCAAGTGTCTCTT+TGG - chr4_2:66353724-66353743 None:intergenic 35.0%
AGGAAAATGTAGTGAAGTCT+TGG - chr4_2:66353777-66353796 None:intergenic 35.0%
! TCTGCATAATTTGTCAGCAA+TGG + chr4_2:66353876-66353895 Msa0616480:intron 35.0%
!!! GATTTATTTTGTTCCGTTGC+AGG + chr4_2:66354176-66354195 Msa0616480:intron 35.0%
! TAAATGGTTAAGGCTAGTTC+AGG + chr4_2:66354370-66354389 Msa0616480:CDS 35.0%
CATCAGTTCTTTAAATCGCA+TGG + chr4_2:66354407-66354426 Msa0616480:CDS 35.0%
TTTAACCGAGGGAATATAAC+TGG - chr4_2:66354467-66354486 None:intergenic 35.0%
!!! TAAGGCTTAGTTTTAACCGA+GGG - chr4_2:66354478-66354497 None:intergenic 35.0%
!!! TTAAGGCTTAGTTTTAACCG+AGG - chr4_2:66354479-66354498 None:intergenic 35.0%
!!! TTTCATCTTTTGTGCTGCTT+AGG - chr4_2:66354599-66354618 None:intergenic 35.0%
ACAGATTAACAGAGTATGTG+TGG + chr4_2:66354753-66354772 Msa0616480:three_prime_UTR 35.0%
CAGATTAACAGAGTATGTGT+GGG + chr4_2:66354754-66354773 Msa0616480:three_prime_UTR 35.0%
CTGTAAATACTTGTACAGGT+TGG - chr4_2:66354786-66354805 None:intergenic 35.0%
TGAACATATTGTTGCTCTGA+TGG + chr4_2:66354932-66354951 Msa0616480:three_prime_UTR 35.0%
TTCCTCTACTCAAATGGTTA+TGG - chr4_2:66355129-66355148 None:intergenic 35.0%
GGAAAAAGAGAGGATCAAGA+AGG - chr4_2:66344776-66344795 None:intergenic 40.0%
!! TGCAATTTGGTGGTGATGAT+CGG + chr4_2:66344965-66344984 Msa0616480:five_prime_UTR 40.0%
GAGAGACAAGAATGTTGAAG+AGG + chr4_2:66345041-66345060 Msa0616480:five_prime_UTR 40.0%
AGCTGGAACCAATAACTTTG+TGG - chr4_2:66345127-66345146 None:intergenic 40.0%
GTGTAACTACGGACAAGTTT+AGG + chr4_2:66345280-66345299 Msa0616480:intron 40.0%
CGTGGTGATAGATTGGAAAA+AGG + chr4_2:66345596-66345615 Msa0616480:intron 40.0%
TATGGGAATCGTTTAAGGAG+TGG + chr4_2:66345902-66345921 Msa0616480:five_prime_UTR 40.0%
! TTTAAGGAGTGGAGTGCTTA+TGG + chr4_2:66345913-66345932 Msa0616480:five_prime_UTR 40.0%
AGCTGAATAGCCGACAAATA+CGG - chr4_2:66345994-66346013 None:intergenic 40.0%
! TTGTCGGCTATTCAGCTATA+TGG + chr4_2:66345997-66346016 Msa0616480:five_prime_UTR 40.0%
GATGCTATATTGAACCCTCA+AGG - chr4_2:66346621-66346640 None:intergenic 40.0%
TAGTAGAAAGTCATGCCATG+AGG + chr4_2:66346935-66346954 Msa0616480:intron 40.0%
CAAAACACTATGTTGAGCAG+TGG - chr4_2:66346961-66346980 None:intergenic 40.0%
! CACTGCTCAACATAGTGTTT+TGG + chr4_2:66346959-66346978 Msa0616480:intron 40.0%
GTGAAAAGCAAAGGCTCTTT+GGG + chr4_2:66347060-66347079 Msa0616480:intron 40.0%
! GCTCTTTGGGAGAAAATTTC+CGG + chr4_2:66347073-66347092 Msa0616480:intron 40.0%
TTTGGGAGAAAATTTCCGGA+GGG + chr4_2:66347077-66347096 Msa0616480:intron 40.0%
AAAGGCAGTCAAAGAAACAC+TGG + chr4_2:66347158-66347177 Msa0616480:intron 40.0%
AAGGCAGTCAAAGAAACACT+GGG + chr4_2:66347159-66347178 Msa0616480:intron 40.0%
AAGAAACACTGGGAAAATCG+AGG + chr4_2:66347169-66347188 Msa0616480:intron 40.0%
AGAAACACTGGGAAAATCGA+GGG + chr4_2:66347170-66347189 Msa0616480:intron 40.0%
CATGACACTTGTGTAGAATG+AGG + chr4_2:66347269-66347288 Msa0616480:intron 40.0%
GATACCTTGTTCCCCTAATT+TGG - chr4_2:66347366-66347385 None:intergenic 40.0%
AAAGAGATGCTATAGCAGAG+TGG + chr4_2:66347443-66347462 Msa0616480:intron 40.0%
AAGAGATGCTATAGCAGAGT+GGG + chr4_2:66347444-66347463 Msa0616480:intron 40.0%
!! AGGGCTATTTTGCCACTATT+TGG - chr4_2:66347544-66347563 None:intergenic 40.0%
CCTAGAAACAACAACGAGAA+AGG - chr4_2:66347850-66347869 None:intergenic 40.0%
!! CCTTTCTCGTTGTTGTTTCT+AGG + chr4_2:66347847-66347866 Msa0616480:intron 40.0%
ACGCAAACGTCAAAAAACAG+GGG - chr4_2:66347879-66347898 None:intergenic 40.0%
TGCGTATATGCAAATTGCGA+AGG + chr4_2:66347894-66347913 Msa0616480:intron 40.0%
ATCAGAACGCCTATTGTGAA+GGG - chr4_2:66347930-66347949 None:intergenic 40.0%
TATCAGAACGCCTATTGTGA+AGG - chr4_2:66347931-66347950 None:intergenic 40.0%
TTCACAATAGGCGTTCTGAT+AGG + chr4_2:66347930-66347949 Msa0616480:intron 40.0%
TCACAATAGGCGTTCTGATA+GGG + chr4_2:66347931-66347950 Msa0616480:intron 40.0%
!!! ACTTTAGTGGTTTTGGGGTT+GGG + chr4_2:66348197-66348216 Msa0616480:intron 40.0%
AAGGCAACAAGTATTCCTTG+AGG + chr4_2:66348345-66348364 Msa0616480:intron 40.0%
! CTTTCTAGTGCTTAGTCTGT+TGG - chr4_2:66348372-66348391 None:intergenic 40.0%
CAACAGACTAAGCACTAGAA+AGG + chr4_2:66348370-66348389 Msa0616480:intron 40.0%
TATCGAAGAATCCAAGCATG+AGG + chr4_2:66348413-66348432 Msa0616480:intron 40.0%
AGAATCCAAGCATGAGGTAT+AGG + chr4_2:66348419-66348438 Msa0616480:intron 40.0%
ACTAGATGATATACCCCTTG+AGG + chr4_2:66348449-66348468 Msa0616480:intron 40.0%
ATATACCCCTTGAGGTATGA+TGG + chr4_2:66348457-66348476 Msa0616480:intron 40.0%
TATACCCCTTGAGGTATGAT+GGG + chr4_2:66348458-66348477 Msa0616480:intron 40.0%
AACACCCTGTGTGTGTATTA+AGG - chr4_2:66348775-66348794 None:intergenic 40.0%
!!! AAAAGCAGGTTTTGTTGCAG+TGG + chr4_2:66348930-66348949 Msa0616480:intron 40.0%
TTGTATGGAATGAAGAGGGA+AGG - chr4_2:66349375-66349394 None:intergenic 40.0%
TACTTCAGCTGAAATCTCGA+TGG - chr4_2:66349470-66349489 None:intergenic 40.0%
ATTCTCTCTCCCCTTCTTTA+TGG + chr4_2:66349593-66349612 Msa0616480:intron 40.0%
AATCAGTGGCCATAAAGAAG+GGG - chr4_2:66349605-66349624 None:intergenic 40.0%
GAATCAGTGGCCATAAAGAA+GGG - chr4_2:66349606-66349625 None:intergenic 40.0%
AGAATCAGTGGCCATAAAGA+AGG - chr4_2:66349607-66349626 None:intergenic 40.0%
TAGCTACCAAGTGCATCTAT+AGG - chr4_2:66349763-66349782 None:intergenic 40.0%
AGTAGTGATGACAGTGAAAC+TGG + chr4_2:66350032-66350051 Msa0616480:five_prime_UTR 40.0%
GTAGTGATGACAGTGAAACT+GGG + chr4_2:66350033-66350052 Msa0616480:five_prime_UTR 40.0%
TTGGAACAAGGTCATCCTTA+TGG + chr4_2:66350083-66350102 Msa0616480:five_prime_UTR 40.0%
!! AGATGGACTGTTCAGGTTAA+GGG - chr4_2:66350168-66350187 None:intergenic 40.0%
!! AAGATGGACTGTTCAGGTTA+AGG - chr4_2:66350169-66350188 None:intergenic 40.0%
CACAACTTCTCAATGACATG+AGG - chr4_2:66350243-66350262 None:intergenic 40.0%
CCTGTGGGTATTCGATATAT+AGG - chr4_2:66350428-66350447 None:intergenic 40.0%
CCTATATATCGAATACCCAC+AGG + chr4_2:66350425-66350444 Msa0616480:CDS 40.0%
!!! TCTTTTAAAGTAGGGCCTGT+GGG - chr4_2:66350443-66350462 None:intergenic 40.0%
!!! ATCTTTTAAAGTAGGGCCTG+TGG - chr4_2:66350444-66350463 None:intergenic 40.0%
! AATTACCTGTCAAGGGTGTA+TGG - chr4_2:66350499-66350518 None:intergenic 40.0%
! CAACTTTGGAGAAGAAAAGC+AGG - chr4_2:66350605-66350624 None:intergenic 40.0%
TTAATTAACCTTGGCGCAAC+TGG + chr4_2:66350666-66350685 Msa0616480:intron 40.0%
GGCCTCTTGTGTAAAAAACA+GGG + chr4_2:66350739-66350758 Msa0616480:intron 40.0%
AAGCAATAAAAAGGGCAACC+CGG - chr4_2:66350836-66350855 None:intergenic 40.0%
TCGATTTAGTCCCTTAAGCA+TGG + chr4_2:66350898-66350917 Msa0616480:intron 40.0%
CGATTTAGTCCCTTAAGCAT+GGG + chr4_2:66350899-66350918 Msa0616480:intron 40.0%
!! TCAAGTTGGTCCCTTATTGT+TGG - chr4_2:66350945-66350964 None:intergenic 40.0%
!!! AGATGCTTGTGGTTTTGGAT+AGG + chr4_2:66351021-66351040 Msa0616480:intron 40.0%
!!! GATGCTTGTGGTTTTGGATA+GGG + chr4_2:66351022-66351041 Msa0616480:intron 40.0%
!!! ATGCTTGTGGTTTTGGATAG+GGG + chr4_2:66351023-66351042 Msa0616480:intron 40.0%
!! ACAAAATATGGGCTGGGTAA+AGG + chr4_2:66351340-66351359 Msa0616480:intron 40.0%
!! CAAAATATGGGCTGGGTAAA+GGG + chr4_2:66351341-66351360 Msa0616480:intron 40.0%
GGAATATGTCATTCAGTTCC+AGG - chr4_2:66351391-66351410 None:intergenic 40.0%
AAAAAAAACTACAGAGCGGG+GGG - chr4_2:66351596-66351615 None:intergenic 40.0%
GAAAAAAAACTACAGAGCGG+GGG - chr4_2:66351597-66351616 None:intergenic 40.0%
TGATGCCATGATAGAAAGGA+GGG - chr4_2:66351631-66351650 None:intergenic 40.0%
ATGATGCCATGATAGAAAGG+AGG - chr4_2:66351632-66351651 None:intergenic 40.0%
CATCATAGAGCTCCTTATCA+AGG + chr4_2:66351646-66351665 Msa0616480:intron 40.0%
TGATGTGAGATTCAATCCAG+AGG - chr4_2:66351696-66351715 None:intergenic 40.0%
!! AGAGGAGCATTTGGATTAAC+GGG - chr4_2:66351843-66351862 None:intergenic 40.0%
!! AGGTATCTTAGAGGAGCATT+TGG - chr4_2:66351852-66351871 None:intergenic 40.0%
AAAATCCAGCTTATACGACC+TGG + chr4_2:66351901-66351920 Msa0616480:intron 40.0%
AAATCCAGCTTATACGACCT+GGG + chr4_2:66351902-66351921 Msa0616480:intron 40.0%
CTTAGTTGAATCCATCACCA+AGG + chr4_2:66352077-66352096 Msa0616480:intron 40.0%
AGGATCAAATTGATCGCGAT+GGG - chr4_2:66352181-66352200 None:intergenic 40.0%
TAGGATCAAATTGATCGCGA+TGG - chr4_2:66352182-66352201 None:intergenic 40.0%
!! GCTAATCATTTTGGTGGGAT+AGG - chr4_2:66352201-66352220 None:intergenic 40.0%
! GGGACACAAGCTAATCATTT+TGG - chr4_2:66352210-66352229 None:intergenic 40.0%
AGGTCTACAGTTTCGTACTT+CGG + chr4_2:66352290-66352309 Msa0616480:intron 40.0%
TACAGTTTCGTACTTCGGAA+TGG + chr4_2:66352295-66352314 Msa0616480:intron 40.0%
ACAGTTTCGTACTTCGGAAT+GGG + chr4_2:66352296-66352315 Msa0616480:intron 40.0%
ATTGCTTATTTGCAGACACG+TGG + chr4_2:66352366-66352385 Msa0616480:intron 40.0%
AACTGTGACTTAGGAACGAA+GGG - chr4_2:66352564-66352583 None:intergenic 40.0%
CTATTAGAGGGAAAATGCCT+TGG + chr4_2:66352584-66352603 Msa0616480:intron 40.0%
GGAAAATGCCTTGGGAAATT+CGG + chr4_2:66352593-66352612 Msa0616480:intron 40.0%
!! GGAAATTTTGGCAGTACTGA+AGG - chr4_2:66352620-66352639 None:intergenic 40.0%
TGCGCAAAATCCATCATTTC+AGG + chr4_2:66352674-66352693 Msa0616480:intron 40.0%
CACTTTCTTGCCTGAAATGA+TGG - chr4_2:66352687-66352706 None:intergenic 40.0%
CATCATTTCAGGCAAGAAAG+TGG + chr4_2:66352685-66352704 Msa0616480:intron 40.0%
!! TCTCAATGGATTGAAGGATG+TGG - chr4_2:66352738-66352757 None:intergenic 40.0%
GAGCAATTCAAATTGTACGG+AGG - chr4_2:66352803-66352822 None:intergenic 40.0%
! GATCCAGTTTGTTTGAGACT+TGG + chr4_2:66352839-66352858 Msa0616480:intron 40.0%
TTGCCAAGTCTCAAACAAAC+TGG - chr4_2:66352845-66352864 None:intergenic 40.0%
GACTTGGCAACAATTCTTAC+AGG + chr4_2:66352855-66352874 Msa0616480:intron 40.0%
CTAGGCTCTCTAATTCCTAA+AGG - chr4_2:66353152-66353171 None:intergenic 40.0%
CTATCAAGAACGTGTTTGTG+AGG - chr4_2:66353275-66353294 None:intergenic 40.0%
CTCACAAACACGTTCTTGAT+AGG + chr4_2:66353273-66353292 Msa0616480:intron 40.0%
ACAAACACGTTCTTGATAGG+AGG + chr4_2:66353276-66353295 Msa0616480:intron 40.0%
ATAAACCACCAACGAATGCT+AGG + chr4_2:66353308-66353327 Msa0616480:intron 40.0%
GTTTCAGATGTTGTAAGCAC+TGG - chr4_2:66353444-66353463 None:intergenic 40.0%
! CATTGGCCCAGTATCAATTT+TGG - chr4_2:66353501-66353520 None:intergenic 40.0%
! AGATGTCACACCTTCTAGTT+GGG - chr4_2:66353541-66353560 None:intergenic 40.0%
AAGATGTCACACCTTCTAGT+TGG - chr4_2:66353542-66353561 None:intergenic 40.0%
TATTGGATCAGCACTAACTG+CGG + chr4_2:66353580-66353599 Msa0616480:intron 40.0%
CGGAATGATAAATTGAGGTC+TGG + chr4_2:66353665-66353684 Msa0616480:intron 40.0%
!! TCTTTGGTGCTGATGTTGTT+TGG - chr4_2:66353708-66353727 None:intergenic 40.0%
! TTGTTAGAAGCATGACACTC+TGG + chr4_2:66353993-66354012 Msa0616480:intron 40.0%
! TGTTAGAAGCATGACACTCT+GGG + chr4_2:66353994-66354013 Msa0616480:intron 40.0%
!! TTCCATCCCTACTTTTGCAA+TGG + chr4_2:66354262-66354281 Msa0616480:CDS 40.0%
AGGCTGCAGATAAATGGTTA+AGG + chr4_2:66354360-66354379 Msa0616480:CDS 40.0%
AAGCCTTAATTTCATTGCCG+TGG + chr4_2:66354490-66354509 Msa0616480:three_prime_UTR 40.0%
ACACCACGGCAATGAAATTA+AGG - chr4_2:66354496-66354515 None:intergenic 40.0%
TCACAATCTCTACAGATGGA+TGG - chr4_2:66354534-66354553 None:intergenic 40.0%
TCCATCTGTAGAGATTGTGA+TGG + chr4_2:66354534-66354553 Msa0616480:three_prime_UTR 40.0%
! GTTTTTCCCCCTTTTCAGAA+GGG - chr4_2:66354703-66354722 None:intergenic 40.0%
! AGTTTTTCCCCCTTTTCAGA+AGG - chr4_2:66354704-66354723 None:intergenic 40.0%
!! GGCACAATTTTGGTACTATC+TGG + chr4_2:66354909-66354928 Msa0616480:three_prime_UTR 40.0%
CATATTGTTGCTCTGATGGT+AGG + chr4_2:66354936-66354955 Msa0616480:three_prime_UTR 40.0%
AGCCATAACCATTTGAGTAG+AGG + chr4_2:66355124-66355143 Msa0616480:three_prime_UTR 40.0%
CAAGAAGGAGAAACAGGAAG+TGG - chr4_2:66344761-66344780 None:intergenic 45.0%
GAGGATCAAGAAGGAGAAAC+AGG - chr4_2:66344767-66344786 None:intergenic 45.0%
TCCAGCTCAGTATTTCTCCA+AGG + chr4_2:66345140-66345159 Msa0616480:five_prime_UTR 45.0%
ACCTTGGAGAAATACTGAGC+TGG - chr4_2:66345144-66345163 None:intergenic 45.0%
CAAAGCACAAACACAGACAC+CGG + chr4_2:66345363-66345382 Msa0616480:intron 45.0%
! ACGTCTTCAATCAGAAGTGC+CGG + chr4_2:66345501-66345520 Msa0616480:intron 45.0%
TGTCTGTAGACGACAATGAG+AGG + chr4_2:66345829-66345848 Msa0616480:intron 45.0%
TGTAGACGACAATGAGAGGT+TGG + chr4_2:66345833-66345852 Msa0616480:intron 45.0%
! TTGGCACTCGACTTTTCTGT+AGG - chr4_2:66346027-66346046 None:intergenic 45.0%
AAAAGTCGAGTGCCAAGACA+AGG + chr4_2:66346031-66346050 Msa0616480:five_prime_UTR 45.0%
GGTGAAAAGCAAAGGCTCTT+TGG + chr4_2:66347059-66347078 Msa0616480:intron 45.0%
! CTTTGGGAGAAAATTTCCGG+AGG + chr4_2:66347076-66347095 Msa0616480:intron 45.0%
CTTAGATCTCTCAAACCCTC+CGG - chr4_2:66347095-66347114 None:intergenic 45.0%
! TGAGAGATCTAAGGAAGTGC+TGG + chr4_2:66347102-66347121 Msa0616480:intron 45.0%
GAAACACTGGGAAAATCGAG+GGG + chr4_2:66347171-66347190 Msa0616480:intron 45.0%
CACCTAAGAGTGAGGATTCT+TGG + chr4_2:66347198-66347217 Msa0616480:intron 45.0%
AGCCAAGAATCCTCACTCTT+AGG - chr4_2:66347203-66347222 None:intergenic 45.0%
GGAACCAAATTAGGGGAACA+AGG + chr4_2:66347359-66347378 Msa0616480:intron 45.0%
ATGCTATAGCAGAGTGGGAA+TGG + chr4_2:66347449-66347468 Msa0616480:intron 45.0%
TGCAAATCGAGGCCAAATAG+TGG + chr4_2:66347529-66347548 Msa0616480:intron 45.0%
GTGGCAAAATAGCCCTTTAG+TGG + chr4_2:66347548-66347567 Msa0616480:intron 45.0%
GCCCTTTAGTGGCTGTTAAA+TGG + chr4_2:66347559-66347578 Msa0616480:intron 45.0%
GAAACAACAACGAGAAAGGG+TGG - chr4_2:66347846-66347865 None:intergenic 45.0%
TCAGAACGCCTATTGTGAAG+GGG - chr4_2:66347929-66347948 None:intergenic 45.0%
CACAATAGGCGTTCTGATAG+GGG + chr4_2:66347932-66347951 Msa0616480:intron 45.0%
ATAGCCAGGTGACTGCTATT+GGG - chr4_2:66348167-66348186 None:intergenic 45.0%
!! AAGTGGTATAGTGGATAGCC+AGG - chr4_2:66348181-66348200 None:intergenic 45.0%
CAACCCCAAAACCACTAAAG+TGG - chr4_2:66348198-66348217 None:intergenic 45.0%
!!! CACTTTAGTGGTTTTGGGGT+TGG + chr4_2:66348196-66348215 Msa0616480:intron 45.0%
CAGACTAAGCACTAGAAAGG+AGG + chr4_2:66348373-66348392 Msa0616480:intron 45.0%
ATCCAAGCATGAGGTATAGG+TGG + chr4_2:66348422-66348441 Msa0616480:intron 45.0%
AACCACCTATACCTCATGCT+TGG - chr4_2:66348427-66348446 None:intergenic 45.0%
AAGCATGAGGTATAGGTGGT+TGG + chr4_2:66348426-66348445 Msa0616480:intron 45.0%
ATACCCCTTGAGGTATGATG+GGG + chr4_2:66348459-66348478 Msa0616480:intron 45.0%
TATCCCCATCATACCTCAAG+GGG - chr4_2:66348465-66348484 None:intergenic 45.0%
CTATCCCCATCATACCTCAA+GGG - chr4_2:66348466-66348485 None:intergenic 45.0%
GTAGTTAACCTCACCTTGCT+TGG + chr4_2:66348814-66348833 Msa0616480:intron 45.0%
ACAACTACAACCACCAAGCA+AGG - chr4_2:66348830-66348849 None:intergenic 45.0%
AAGTGTGTGTGTGAGGTAAG+TGG + chr4_2:66349180-66349199 Msa0616480:intron 45.0%
AAGTGGAGACACTGCATTTG+AGG + chr4_2:66349197-66349216 Msa0616480:intron 45.0%
AGTGGAGACACTGCATTTGA+GGG + chr4_2:66349198-66349217 Msa0616480:intron 45.0%
GGAAGCAGTGATTGCGAATA+TGG + chr4_2:66349888-66349907 Msa0616480:five_prime_UTR 45.0%
AGCAGTAAACACCTGACAAG+TGG + chr4_2:66349942-66349961 Msa0616480:five_prime_UTR 45.0%
GCAACAGACATCCAACTGTT+TGG - chr4_2:66350274-66350293 None:intergenic 45.0%
ACAGTTGGATGTCTGTTGCA+TGG + chr4_2:66350275-66350294 Msa0616480:five_prime_UTR 45.0%
! TCAAGGGTGTATGGAGTGTA+TGG - chr4_2:66350490-66350509 None:intergenic 45.0%
AAGCCTGTGTTTATCTGCAG+TGG + chr4_2:66350529-66350548 Msa0616480:intron 45.0%
ATGCCACTGCAGATAAACAC+AGG - chr4_2:66350535-66350554 None:intergenic 45.0%
GTTTATCTGCAGTGGCATCT+TGG + chr4_2:66350537-66350556 Msa0616480:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG + chr4_2:66350693-66350712 Msa0616480:intron 45.0%
CGGCCTCTTGTGTAAAAAAC+AGG + chr4_2:66350738-66350757 Msa0616480:intron 45.0%
CGTACAATGCACCAAATGGT+GGG + chr4_2:66350770-66350789 Msa0616480:intron 45.0%
! AGCGAAGATGCTTGTGGTTT+TGG + chr4_2:66351016-66351035 Msa0616480:intron 45.0%
AAAAAAACTACAGAGCGGGG+GGG - chr4_2:66351595-66351614 None:intergenic 45.0%
AAACTTCCGTTCAACCCACT+AGG + chr4_2:66351738-66351757 Msa0616480:intron 45.0%
!! GAGGAGCATTTGGATTAACG+GGG - chr4_2:66351842-66351861 None:intergenic 45.0%
CAAGGAATCTTGTGAATCCC+AGG - chr4_2:66351922-66351941 None:intergenic 45.0%
! CGTTTCTTTCCCGTGTTGTT+CGG + chr4_2:66351976-66351995 Msa0616480:intron 45.0%
TCTCACTCACAATTCACTGC+CGG + chr4_2:66352037-66352056 Msa0616480:intron 45.0%
AGCAATGGAACAATCTCCCT+TGG - chr4_2:66352097-66352116 None:intergenic 45.0%
GCAAGCAAGATACTCAGCAA+TGG - chr4_2:66352112-66352131 None:intergenic 45.0%
AATTGATCGCGATGGGTGAT+AGG - chr4_2:66352174-66352193 None:intergenic 45.0%
TCCAGCAAGAGCAAGACTAA+AGG - chr4_2:66352502-66352521 None:intergenic 45.0%
!!! GGAATGCTCACTGGTTTTGA+TGG + chr4_2:66352535-66352554 Msa0616480:intron 45.0%
GAACTGTGACTTAGGAACGA+AGG - chr4_2:66352565-66352584 None:intergenic 45.0%
ATTTCAGGCAAGAAAGTGGC+CGG + chr4_2:66352689-66352708 Msa0616480:intron 45.0%
!!! GGCCGGGTGCAATTTTAATT+CGG + chr4_2:66352706-66352725 Msa0616480:intron 45.0%
GGCCGAATTAAAATTGCACC+CGG - chr4_2:66352711-66352730 None:intergenic 45.0%
TGGATTGAAGGATGTGGTCA+AGG - chr4_2:66352732-66352751 None:intergenic 45.0%
! CAGAACCATACAGGTTTTCC+TGG + chr4_2:66352968-66352987 Msa0616480:intron 45.0%
ATTGTCCTAGCATTCGTTGG+TGG - chr4_2:66353316-66353335 None:intergenic 45.0%
!!! GCACTGGCTTGGTCTAATTT+TGG - chr4_2:66353428-66353447 None:intergenic 45.0%
!! AGATGTTGTAAGCACTGGCT+TGG - chr4_2:66353439-66353458 None:intergenic 45.0%
GCTTCAGTTGCAGTTAGCAT+TGG - chr4_2:66353518-66353537 None:intergenic 45.0%
! GATGTCACACCTTCTAGTTG+GGG - chr4_2:66353540-66353559 None:intergenic 45.0%
!! CTCACAGCTTTGAACCAGAT+CGG + chr4_2:66353645-66353664 Msa0616480:intron 45.0%
ATCAGCACCAAAGAGACACT+TGG + chr4_2:66353714-66353733 Msa0616480:intron 45.0%
! TGCAGAATTGCTACTTGTGC+AGG - chr4_2:66353862-66353881 None:intergenic 45.0%
! TTTTGTTCCGTTGCAGGAAG+TGG + chr4_2:66354182-66354201 Msa0616480:intron 45.0%
TCACTGGGATAAACCAGTAC+AGG - chr4_2:66354221-66354240 None:intergenic 45.0%
! ACTGGTTTATCCCAGTGAGA+TGG + chr4_2:66354223-66354242 Msa0616480:CDS 45.0%
GTTTATCCCAGTGAGATGGA+TGG + chr4_2:66354227-66354246 Msa0616480:CDS 45.0%
AGCCATTGCAAAAGTAGGGA+TGG - chr4_2:66354267-66354286 None:intergenic 45.0%
AGGCAGCCATTGCAAAAGTA+GGG - chr4_2:66354271-66354290 None:intergenic 45.0%
TAGGCAGCCATTGCAAAAGT+AGG - chr4_2:66354272-66354291 None:intergenic 45.0%
AGTAATGAATTCCCTCGTGC+AGG + chr4_2:66354340-66354359 Msa0616480:CDS 45.0%
GCATGCCAGTTATATTCCCT+CGG + chr4_2:66354459-66354478 Msa0616480:three_prime_UTR 45.0%
GCCATCACAATCTCTACAGA+TGG - chr4_2:66354538-66354557 None:intergenic 45.0%
CTGTAGAGATTGTGATGGCA+CGG + chr4_2:66354539-66354558 Msa0616480:three_prime_UTR 45.0%
! AGTGGAACTCCCTTCTGAAA+AGG + chr4_2:66354691-66354710 Msa0616480:three_prime_UTR 45.0%
! GTGGAACTCCCTTCTGAAAA+GGG + chr4_2:66354692-66354711 Msa0616480:three_prime_UTR 45.0%
! TGGAACTCCCTTCTGAAAAG+GGG + chr4_2:66354693-66354712 Msa0616480:three_prime_UTR 45.0%
! GCTGAGACCCCTTTAATTTC+TGG + chr4_2:66354816-66354835 Msa0616480:three_prime_UTR 45.0%
CTAGATTTCACTGTGTGGTG+TGG + chr4_2:66354888-66354907 Msa0616480:three_prime_UTR 45.0%
! TGTGTGGTGTGGCACAATTT+TGG + chr4_2:66354899-66354918 Msa0616480:three_prime_UTR 45.0%
!! ATGTTTATTATTTATATAAT+TGG + chr4_2:66345726-66345745 Msa0616480:intron 5.0%
!! AGAATATAAAAAATAAAATA+AGG - chr4_2:66349578-66349597 None:intergenic 5.0%
! CTGGGTACTGCACTGCAATT+TGG + chr4_2:66344952-66344971 Msa0616480:five_prime_UTR 50.0%
GGTACTGCACTGCAATTTGG+TGG + chr4_2:66344955-66344974 Msa0616480:five_prime_UTR 50.0%
CGGTGTCTGTGTTTGTGCTT+TGG - chr4_2:66345365-66345384 None:intergenic 50.0%
GCATGTCTGACACATGACAC+AGG + chr4_2:66345476-66345495 Msa0616480:intron 50.0%
TATGTTGAGCAGTGGCCTCA+TGG - chr4_2:66346953-66346972 None:intergenic 50.0%
CGGAGGGTTTGAGAGATCTA+AGG + chr4_2:66347093-66347112 Msa0616480:intron 50.0%
! GAGTGATTAGTGTCGCTCCA+TGG - chr4_2:66347475-66347494 None:intergenic 50.0%
! TCACGGATGTAGAAGCGCAA+TGG - chr4_2:66347737-66347756 None:intergenic 50.0%
CCTCTATCGCCGGAAACAAA+GGG - chr4_2:66347781-66347800 None:intergenic 50.0%
TCCTCTATCGCCGGAAACAA+AGG - chr4_2:66347782-66347801 None:intergenic 50.0%
TTTGTTTCCGGCGATAGAGG+AGG + chr4_2:66347781-66347800 Msa0616480:intron 50.0%
CAGAACGCCTATTGTGAAGG+GGG - chr4_2:66347928-66347947 None:intergenic 50.0%
TCTTCCCAATAGCAGTCACC+TGG + chr4_2:66348160-66348179 Msa0616480:intron 50.0%
GATAGCCAGGTGACTGCTAT+TGG - chr4_2:66348168-66348187 None:intergenic 50.0%
GCTTAGTCTGTTGGACCTCA+AGG - chr4_2:66348363-66348382 None:intergenic 50.0%
CCTATCCCCATCATACCTCA+AGG - chr4_2:66348467-66348486 None:intergenic 50.0%
! CCTTGAGGTATGATGGGGAT+AGG + chr4_2:66348464-66348483 Msa0616480:intron 50.0%
GTTAACCTCACCTTGCTTGG+TGG + chr4_2:66348817-66348836 Msa0616480:intron 50.0%
TACAACCACCAAGCAAGGTG+AGG - chr4_2:66348825-66348844 None:intergenic 50.0%
GAAAAAGTTTGGCTGACCGC+TGG + chr4_2:66349139-66349158 Msa0616480:intron 50.0%
CTGAAATCTCGATGGCGACA+AGG - chr4_2:66349462-66349481 None:intergenic 50.0%
GAGAAGAGACACCACTTGTC+AGG - chr4_2:66349956-66349975 None:intergenic 50.0%
CTTCTCAATGACATGAGGGC+AGG - chr4_2:66350238-66350257 None:intergenic 50.0%
GGGTGTATGGAGTGTATGGT+AGG - chr4_2:66350486-66350505 None:intergenic 50.0%
ACACTCCATACACCCTTGAC+AGG + chr4_2:66350491-66350510 Msa0616480:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr4_2:66350677-66350696 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG + chr4_2:66350699-66350718 Msa0616480:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG + chr4_2:66350700-66350719 Msa0616480:intron 50.0%
ACGGGTTCAAGTCCTGGAAA+CGG + chr4_2:66350718-66350737 Msa0616480:intron 50.0%
TTACACAAGAGGCCGTTTCC+AGG - chr4_2:66350733-66350752 None:intergenic 50.0%
GCTGCGTACAATGCACCAAA+TGG + chr4_2:66350766-66350785 Msa0616480:intron 50.0%
GCGTACAATGCACCAAATGG+TGG + chr4_2:66350769-66350788 Msa0616480:intron 50.0%
AGTAACTGCAGTATCTGCCC+TGG + chr4_2:66351370-66351389 Msa0616480:intron 50.0%
AAAAAACTACAGAGCGGGGG+GGG - chr4_2:66351594-66351613 None:intergenic 50.0%
!! CCACAACCTAGTGGGTTGAA+CGG - chr4_2:66351747-66351766 None:intergenic 50.0%
TCATCGAGCCACAACCTAGT+GGG - chr4_2:66351755-66351774 None:intergenic 50.0%
GAATCCCAGGTCGTATAAGC+TGG - chr4_2:66351909-66351928 None:intergenic 50.0%
CTCACTCACAATTCACTGCC+GGG + chr4_2:66352038-66352057 Msa0616480:intron 50.0%
GGAACAATCTCCCTTGGTGA+TGG - chr4_2:66352091-66352110 None:intergenic 50.0%
!! GCCTTTAGTCTTGCTCTTGC+TGG + chr4_2:66352498-66352517 Msa0616480:intron 50.0%
CTGAAGGTCCGAATTTCCCA+AGG - chr4_2:66352604-66352623 None:intergenic 50.0%
TTTCAGGCAAGAAAGTGGCC+GGG + chr4_2:66352690-66352709 Msa0616480:intron 50.0%
ATTGTACGGAGGACAGCTCA+GGG - chr4_2:66352792-66352811 None:intergenic 50.0%
AATTGTACGGAGGACAGCTC+AGG - chr4_2:66352793-66352812 None:intergenic 50.0%
TCTGACATGCACCACTATGG+AGG - chr4_2:66352952-66352971 None:intergenic 50.0%
! GGTTCTGACATGCACCACTA+TGG - chr4_2:66352955-66352974 None:intergenic 50.0%
GGTGCATGTCAGAACCATAC+AGG + chr4_2:66352959-66352978 Msa0616480:intron 50.0%
TCGGTCCAGGAAAACCTGTA+TGG - chr4_2:66352976-66352995 None:intergenic 50.0%
GGTTAGGTTTGGGAGAGTCT+AGG - chr4_2:66353170-66353189 None:intergenic 50.0%
AGGTGCAAGCTCAATACCCA+AGG - chr4_2:66353255-66353274 None:intergenic 50.0%
CAACTGAAGCCCCAACTAGA+AGG + chr4_2:66353528-66353547 Msa0616480:intron 50.0%
! CGATCTGGTTCAAAGCTGTG+AGG - chr4_2:66353647-66353666 None:intergenic 50.0%
AGTAGGACCACTTCCTGCAA+CGG - chr4_2:66354192-66354211 None:intergenic 50.0%
GGATAAACCAGTACAGGACC+AGG - chr4_2:66354215-66354234 None:intergenic 50.0%
GGTACACCATCCATCTCACT+GGG - chr4_2:66354236-66354255 None:intergenic 50.0%
TGGTACACCATCCATCTCAC+TGG - chr4_2:66354237-66354256 None:intergenic 50.0%
TTTATCTGCAGCCTGCACGA+GGG - chr4_2:66354354-66354373 None:intergenic 50.0%
ATTTATCTGCAGCCTGCACG+AGG - chr4_2:66354355-66354374 None:intergenic 50.0%
TCGTGCAGGCTGCAGATAAA+TGG + chr4_2:66354354-66354373 Msa0616480:CDS 50.0%
GCTAGTTCAGGTGAATCACC+CGG + chr4_2:66354382-66354401 Msa0616480:CDS 50.0%
GGTTGTGACAGCCTAGTTGT+AGG + chr4_2:66354560-66354579 Msa0616480:three_prime_UTR 50.0%
! GGAACTCCCTTCTGAAAAGG+GGG + chr4_2:66354694-66354713 Msa0616480:three_prime_UTR 50.0%
TGCTCTGATGGTAGGAGAGA+TGG + chr4_2:66354944-66354963 Msa0616480:three_prime_UTR 50.0%
GTCCTGTAGTGTGTCGTGTC+CGG - chr4_2:66345385-66345404 None:intergenic 55.0%
CGACACACTACAGGACACAC+TGG + chr4_2:66345389-66345408 Msa0616480:intron 55.0%
! GAGTGGAGTGCTTATGGTGC+TGG + chr4_2:66345919-66345938 Msa0616480:five_prime_UTR 55.0%
GGGGTTTGCACCTAAGAGTG+AGG + chr4_2:66347190-66347209 Msa0616480:intron 55.0%
TAGCAGAGTGGGAATGGCCA+TGG + chr4_2:66347455-66347474 Msa0616480:intron 55.0%
GCAGTAGCTGCTGCAAATCG+AGG + chr4_2:66347518-66347537 Msa0616480:intron 55.0%
! GCATAGCGGCCCTTTGTTTC+CGG + chr4_2:66347769-66347788 Msa0616480:intron 55.0%
! CCCTTTGTTTCCGGCGATAG+AGG + chr4_2:66347778-66347797 Msa0616480:intron 55.0%
GAAAACGCCTCCTCTATCGC+CGG - chr4_2:66347791-66347810 None:intergenic 55.0%
!!! GCGATAGAGGAGGCGTTTTC+TGG + chr4_2:66347791-66347810 Msa0616480:intron 55.0%
CAAGCAGCCCCCTTCACAAT+AGG + chr4_2:66347918-66347937 Msa0616480:intron 55.0%
GACATTGCCTTGTCAGCCAG+CGG - chr4_2:66350116-66350135 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr4_2:66350712-66350731 Msa0616480:intron 55.0%
CTAAAGCTCCCGCATACGCA+AGG - chr4_2:66350809-66350828 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr4_2:66350814-66350833 Msa0616480:intron 55.0%
AAAAACTACAGAGCGGGGGG+GGG - chr4_2:66351593-66351612 None:intergenic 55.0%
CCGTTCAACCCACTAGGTTG+TGG + chr4_2:66351744-66351763 Msa0616480:intron 55.0%
CTCATCGAGCCACAACCTAG+TGG - chr4_2:66351756-66351775 None:intergenic 55.0%
TGCGAGTGCACCGAACAACA+CGG - chr4_2:66351989-66352008 None:intergenic 55.0%
GGTGCACTCGCATCAACTCT+GGG + chr4_2:66351997-66352016 Msa0616480:intron 55.0%
!! AGCTCTGAGTTGACACGACC+CGG - chr4_2:66352059-66352078 None:intergenic 55.0%
GCTCTTGCTGGATTCTCCCA+CGG + chr4_2:66352510-66352529 Msa0616480:intron 55.0%
TTGTACGGAGGACAGCTCAG+GGG - chr4_2:66352791-66352810 None:intergenic 55.0%
ACATGCACCACTATGGAGGC+AGG - chr4_2:66352948-66352967 None:intergenic 55.0%
!! TGGTATTGGAGCATCGGTCC+AGG - chr4_2:66352989-66353008 None:intergenic 55.0%
TCCTACTCCTGGTCCTGTAC+TGG + chr4_2:66354205-66354224 Msa0616480:CDS 55.0%
ACCAGTACAGGACCAGGAGT+AGG - chr4_2:66354209-66354228 None:intergenic 55.0%
CACCGGACACGACACACTAC+AGG + chr4_2:66345380-66345399 Msa0616480:intron 60.0%
TCCTTATGGCCGTGAACCGC+TGG + chr4_2:66350097-66350116 Msa0616480:five_prime_UTR 60.0%
CCTTGTCAGCCAGCGGTTCA+CGG - chr4_2:66350109-66350128 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr4_2:66350782-66350801 Msa0616480:intron 60.0%
CATACGCAAGGTCCGGGAAG+GGG - chr4_2:66350797-66350816 None:intergenic 60.0%
GCATACGCAAGGTCCGGGAA+GGG - chr4_2:66350798-66350817 None:intergenic 60.0%
CTTCCCGGACCTTGCGTATG+CGG + chr4_2:66350797-66350816 Msa0616480:intron 60.0%
TTCCCGGACCTTGCGTATGC+GGG + chr4_2:66350798-66350817 Msa0616480:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr4_2:66350815-66350834 Msa0616480:intron 60.0%
AAAACTACAGAGCGGGGGGG+GGG - chr4_2:66351592-66351611 None:intergenic 60.0%
GCGAGTGCACCGAACAACAC+GGG - chr4_2:66351988-66352007 None:intergenic 60.0%
CGGTGCACTCGCATCAACTC+TGG + chr4_2:66351996-66352015 Msa0616480:intron 60.0%
TTGCTGGATTCTCCCACGGC+AGG + chr4_2:66352514-66352533 Msa0616480:intron 60.0%
CCAGTGAGCATTCCTGCCGT+GGG - chr4_2:66352529-66352548 None:intergenic 60.0%
ACCAGTGAGCATTCCTGCCG+TGG - chr4_2:66352530-66352549 None:intergenic 60.0%
TGTACGGAGGACAGCTCAGG+GGG - chr4_2:66352790-66352809 None:intergenic 60.0%
CTCGAGTCCTGCCTCCATAG+TGG + chr4_2:66352938-66352957 Msa0616480:intron 60.0%
GCAGGAAGTGGTCCTACTCC+TGG + chr4_2:66354194-66354213 Msa0616480:intron 60.0%
GCCAGCGGTTCACGGCCATA+AGG - chr4_2:66350101-66350120 None:intergenic 65.0%
! CCGTGAACCGCTGGCTGACA+AGG + chr4_2:66350106-66350125 Msa0616480:five_prime_UTR 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr4_2:66350784-66350803 None:intergenic 65.0%
CGCATACGCAAGGTCCGGGA+AGG - chr4_2:66350799-66350818 None:intergenic 65.0%
CTCCCGCATACGCAAGGTCC+GGG - chr4_2:66350803-66350822 None:intergenic 65.0%
GCTCCCGCATACGCAAGGTC+CGG - chr4_2:66350804-66350823 None:intergenic 65.0%
CCCACGGCAGGAATGCTCAC+TGG + chr4_2:66352526-66352545 Msa0616480:intron 65.0%
GTACGGAGGACAGCTCAGGG+GGG - chr4_2:66352789-66352808 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 66344612 66355192 66344612 ID=Msa0616480;Name=Msa0616480
chr4_2 mRNA 66344612 66355192 66344612 ID=Msa0616480-mRNA-1;Parent=Msa0616480;Name=Msa0616480-mRNA-1;_AED=0.02;_eAED=0.02;_QI=1253|1|1|1|0.75|0.6|5|747|117
chr4_2 exon 66344612 66345161 66344612 ID=Msa0616480-mRNA-1:exon:18865;Parent=Msa0616480-mRNA-1
chr4_2 exon 66345838 66346052 66345838 ID=Msa0616480-mRNA-1:exon:18866;Parent=Msa0616480-mRNA-1
chr4_2 exon 66349836 66350127 66349836 ID=Msa0616480-mRNA-1:exon:18867;Parent=Msa0616480-mRNA-1
chr4_2 exon 66350211 66350512 66350211 ID=Msa0616480-mRNA-1:exon:18868;Parent=Msa0616480-mRNA-1
chr4_2 exon 66354198 66355192 66354198 ID=Msa0616480-mRNA-1:exon:18869;Parent=Msa0616480-mRNA-1
chr4_2 five_prime_UTR 66344612 66345161 66344612 ID=Msa0616480-mRNA-1:five_prime_utr;Parent=Msa0616480-mRNA-1
chr4_2 five_prime_UTR 66345838 66346052 66345838 ID=Msa0616480-mRNA-1:five_prime_utr;Parent=Msa0616480-mRNA-1
chr4_2 five_prime_UTR 66349836 66350127 66349836 ID=Msa0616480-mRNA-1:five_prime_utr;Parent=Msa0616480-mRNA-1
chr4_2 five_prime_UTR 66350211 66350406 66350211 ID=Msa0616480-mRNA-1:five_prime_utr;Parent=Msa0616480-mRNA-1
chr4_2 CDS 66350407 66350512 66350407 ID=Msa0616480-mRNA-1:cds;Parent=Msa0616480-mRNA-1
chr4_2 CDS 66354198 66354445 66354198 ID=Msa0616480-mRNA-1:cds;Parent=Msa0616480-mRNA-1
chr4_2 three_prime_UTR 66354446 66355192 66354446 ID=Msa0616480-mRNA-1:three_prime_utr;Parent=Msa0616480-mRNA-1
Gene Sequence

>Msa0616480

ATGTCACTTTATAGGTATCCTATATATCGAATACCCACAGGCCCTACTTTAAAAGATTTAGATGCGTGCTTTCTAACCTACCATACACTCCATACACCCTTGACAGGAAGTGGTCCTACTCCTGGTCCTGTACTGGTTTATCCCAGTGAGATGGATGGTGTACCAAATATTTCCATCCCTACTTTTGCAATGGCTGCCTATAAATTAAAGGGATCTATTTGGATGAAAAAAGAAGTTAGTGAGAATCAAGTAATGAATTCCCTCGTGCAGGCTGCAGATAAATGGTTAAGGCTAGTTCAGGTGAATCACCCGGATCATCAGTTCTTTAAATCGCATGGCACATACTACAAATGA
Protein sequence

>Msa0616480

MSLYRYPIYRIPTGPTLKDLDACFLTYHTLHTPLTGSGPTPGPVLVYPSEMDGVPNISIPTFAMAAYKLKGSIWMKKEVSENQVMNSLVQAADKWLRLVQVNHPDHQFFKSHGTYYK*