AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0617530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0617530 MtrunA17_Chr8g0377421 90.066 302 28 1 341 642 1 300 0.0 557
Msa0617530 MtrunA17_Chr8g0377421 66.426 277 69 5 1 274 1 256 2.33e-112 342
Msa0617530 MtrunA17_Chr8g0377431 91.262 206 18 0 1 206 1 206 3.25e-116 348
Msa0617530 MtrunA17_Chr8g0377431 62.981 208 52 4 341 527 1 204 1.54e-74 240
Msa0617530 MtrunA17_Chr3g0122411 46.528 432 179 8 341 733 1 419 1.03e-102 322
Msa0617530 MtrunA17_Chr3g0122411 45.910 379 151 8 1 329 1 375 1.66e-83 271
Msa0617530 MtrunA17_Chr8g0377401 58.915 258 42 3 341 552 1 240 1.81e-87 276
Msa0617530 MtrunA17_Chr8g0377401 61.111 252 55 5 1 225 1 236 8.86e-78 250
Msa0617530 MtrunA17_Chr8g0377391 63.095 168 46 1 571 722 1 168 3.92e-60 200
Msa0617530 MtrunA17_Chr8g0377391 39.259 135 32 2 247 331 1 135 1.86e-16 77.8
Msa0617530 MtrunA17_Chr8g0377411 89.011 91 10 0 643 733 1 91 6.35e-48 164
Msa0617530 MtrunA17_Chr8g0377411 78.261 46 10 0 285 330 1 46 1.77e-15 72.8
Msa0617530 MtrunA17_Chr7g0258471 36.576 257 134 7 425 672 91 327 8.61e-32 128
Msa0617530 MtrunA17_Chr7g0258471 40.201 199 85 6 144 314 135 327 6.53e-31 125
Msa0617530 MtrunA17_Chr3g0132091 52.252 111 52 1 151 261 73 182 7.69e-31 124
Msa0617530 MtrunA17_Chr3g0132091 44.361 133 72 1 453 585 52 182 2.00e-28 117
Msa0617530 MtrunA17_Chr8g0360361 66.250 80 27 0 149 228 63 142 1.71e-30 118
Msa0617530 MtrunA17_Chr8g0360361 63.158 76 28 0 471 546 62 137 1.01e-28 113
Msa0617530 MtrunA17_Chr8g0386271 39.796 196 100 6 137 328 85 266 1.61e-29 121
Msa0617530 MtrunA17_Chr8g0386271 33.945 218 109 4 474 663 99 309 5.60e-25 107
Msa0617530 MtrunA17_Chr7g0231911 43.537 147 71 3 400 546 87 221 4.06e-29 118
Msa0617530 MtrunA17_Chr7g0231911 46.405 153 70 4 99 242 98 247 1.27e-28 117
Msa0617530 MtrunA17_Chr4g0046991 67.105 76 25 0 471 546 70 145 9.78e-29 112
Msa0617530 MtrunA17_Chr4g0046991 63.158 76 28 0 149 224 71 146 1.34e-26 106
Msa0617530 MtrunA17_Chr4g0061651 40.000 185 85 6 151 328 123 288 7.62e-28 117
Msa0617530 MtrunA17_Chr4g0061651 56.977 86 35 1 474 559 123 206 3.33e-26 112
Msa0617530 MtrunA17_Chr5g0420051 56.977 86 37 0 149 234 179 264 7.11e-27 114
Msa0617530 MtrunA17_Chr5g0420051 42.400 125 71 1 422 546 130 253 7.31e-27 114
Msa0617530 MtrunA17_Chr8g0334671 49.194 124 52 3 423 546 147 259 9.49e-27 112
Msa0617530 MtrunA17_Chr8g0334671 64.103 78 28 0 149 226 185 262 1.44e-26 111
Msa0617530 MtrunA17_Chr7g0224821 58.750 80 33 0 151 230 77 156 1.30e-26 112
Msa0617530 MtrunA17_Chr7g0224821 57.534 73 31 0 474 546 77 149 6.37e-24 104
Msa0617530 MtrunA17_Chr2g0308321 55.556 90 40 0 137 226 157 246 2.36e-26 114
Msa0617530 MtrunA17_Chr2g0308321 61.644 73 28 0 474 546 171 243 9.67e-25 108
Msa0617530 MtrunA17_Chr1g0162871 57.831 83 35 0 148 230 101 183 2.69e-25 112
Msa0617530 MtrunA17_Chr1g0162871 47.573 103 52 1 446 546 74 176 1.22e-22 103
Msa0617530 MtrunA17_Chr2g0282521 58.667 75 31 0 472 546 62 136 6.26e-25 101
Msa0617530 MtrunA17_Chr2g0282521 56.250 80 35 0 149 228 62 141 7.90e-25 100
Msa0617530 MtrunA17_Chr1g0194121 48.718 117 55 1 119 230 110 226 2.31e-24 109
Msa0617530 MtrunA17_Chr1g0194121 56.250 80 35 0 474 553 147 226 1.71e-22 103
Msa0617530 MtrunA17_Chr2g0302791 58.974 78 32 0 151 228 139 216 3.45e-23 105
Msa0617530 MtrunA17_Chr2g0302791 57.895 76 32 0 474 549 139 214 4.04e-22 102
Msa0617530 MtrunA17_Chr7g0270541 55.294 85 38 0 151 235 145 229 2.63e-22 102
Msa0617530 MtrunA17_Chr7g0270541 49.000 100 51 0 459 558 130 229 6.18e-22 101
Msa0617530 MtrunA17_Chr2g0286661 39.716 141 71 2 136 269 88 221 2.88e-22 102
Msa0617530 MtrunA17_Chr2g0286661 36.000 175 93 5 474 641 103 265 4.96e-21 98.6
Msa0617530 MtrunA17_Chr1g0175031 46.226 106 49 2 420 520 18 120 4.66e-20 87.0
Msa0617530 MtrunA17_Chr1g0175031 43.878 98 48 2 105 197 25 120 1.20e-16 77.4
Msa0617530 MtrunA17_Chr2g0317041 51.613 62 30 0 136 197 84 145 3.11e-15 73.9
Msa0617530 MtrunA17_Chr2g0317041 57.143 49 21 0 472 520 97 145 3.53e-14 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0617530 AT5G43270.3 47.561 246 109 8 1 227 1 245 3.69e-45 167
Msa0617530 AT5G43270.3 61.194 134 50 2 414 546 109 241 2.75e-40 154
Msa0617530 AT5G43270.1 47.561 246 109 8 1 227 1 245 3.69e-45 167
Msa0617530 AT5G43270.1 61.194 134 50 2 414 546 109 241 2.75e-40 154
Msa0617530 AT5G43270.2 47.561 246 109 8 1 227 1 245 3.69e-45 167
Msa0617530 AT5G43270.2 61.194 134 50 2 414 546 109 241 2.75e-40 154
Msa0617530 AT1G27360.2 43.028 251 117 8 1 226 1 250 6.76e-44 163
Msa0617530 AT1G27360.2 33.511 376 192 11 341 664 1 370 9.38e-40 151
Msa0617530 AT1G27360.1 43.028 251 117 8 1 226 1 250 6.76e-44 163
Msa0617530 AT1G27360.1 33.511 376 192 11 341 664 1 370 9.38e-40 151
Msa0617530 AT1G27360.3 43.028 251 117 8 1 226 1 250 6.76e-44 163
Msa0617530 AT1G27360.3 33.511 376 192 11 341 664 1 370 9.38e-40 151
Msa0617530 AT1G27360.4 43.028 251 117 8 1 226 1 250 6.76e-44 163
Msa0617530 AT1G27360.4 33.511 376 192 11 341 664 1 370 9.38e-40 151
Msa0617530 AT1G27370.6 41.353 266 129 6 1 240 1 265 8.20e-43 159
Msa0617530 AT1G27370.6 58.779 131 52 2 417 546 119 248 2.16e-41 155
Msa0617530 AT1G27370.1 40.000 265 144 8 417 672 119 377 1.48e-42 159
Msa0617530 AT1G27370.1 41.353 266 129 6 1 240 1 265 3.04e-42 159
Msa0617530 AT1G27370.5 40.000 265 144 8 417 672 119 377 1.48e-42 159
Msa0617530 AT1G27370.5 41.353 266 129 6 1 240 1 265 3.04e-42 159
Msa0617530 AT1G27370.3 40.000 265 144 8 417 672 119 377 1.48e-42 159
Msa0617530 AT1G27370.3 41.353 266 129 6 1 240 1 265 3.04e-42 159
Msa0617530 AT1G27370.2 40.000 265 144 8 417 672 119 377 1.48e-42 159
Msa0617530 AT1G27370.2 41.353 266 129 6 1 240 1 265 3.04e-42 159
Msa0617530 AT1G27370.4 40.000 265 144 8 417 672 119 377 1.48e-42 159
Msa0617530 AT1G27370.4 41.353 266 129 6 1 240 1 265 3.04e-42 159
Msa0617530 AT1G27370.7 40.000 265 144 8 417 672 119 377 1.48e-42 159
Msa0617530 AT1G27370.7 41.353 266 129 6 1 240 1 265 3.04e-42 159
Msa0617530 AT2G42200.1 54.955 111 45 2 148 258 71 176 4.74e-31 125
Msa0617530 AT2G42200.1 32.271 251 140 7 472 706 72 308 7.78e-30 122
Msa0617530 AT3G57920.1 31.210 314 164 13 425 728 27 298 3.35e-28 117
Msa0617530 AT3G57920.1 40.351 171 85 5 150 304 58 227 5.90e-26 110
Msa0617530 AT1G69170.1 65.333 75 26 0 472 546 122 196 4.82e-28 117
Msa0617530 AT1G69170.1 64.103 78 28 0 147 224 120 197 6.32e-28 117
Msa0617530 AT1G02065.1 46.923 130 59 1 423 552 147 266 3.62e-27 113
Msa0617530 AT1G02065.1 63.415 82 29 1 146 226 183 264 2.82e-26 110
Msa0617530 AT5G50570.1 57.143 84 36 0 147 230 97 180 5.61e-27 113
Msa0617530 AT5G50570.1 51.190 84 41 0 463 546 90 173 4.84e-23 102
Msa0617530 AT5G50570.2 57.143 84 36 0 147 230 97 180 5.61e-27 113
Msa0617530 AT5G50570.2 51.190 84 41 0 463 546 90 173 4.84e-23 102
Msa0617530 AT5G50670.1 57.143 84 36 0 147 230 97 180 5.61e-27 113
Msa0617530 AT5G50670.1 51.190 84 41 0 463 546 90 173 4.84e-23 102
Msa0617530 AT5G50670.2 57.143 84 36 0 147 230 97 180 5.61e-27 113
Msa0617530 AT5G50670.2 51.190 84 41 0 463 546 90 173 4.84e-23 102
Msa0617530 AT1G76580.2 55.914 93 41 0 148 240 111 203 1.39e-26 116
Msa0617530 AT1G76580.2 53.933 89 41 0 472 560 112 200 4.72e-23 105
Msa0617530 AT1G76580.3 55.914 93 41 0 148 240 111 203 1.54e-26 116
Msa0617530 AT1G76580.3 53.933 89 41 0 472 560 112 200 4.98e-23 105
Msa0617530 AT2G33810.1 56.667 90 37 1 457 546 39 126 1.73e-26 105
Msa0617530 AT2G33810.1 60.811 74 29 0 151 224 54 127 1.50e-25 102
Msa0617530 AT1G76580.1 55.914 93 41 0 148 240 111 203 2.51e-26 116
Msa0617530 AT1G76580.1 53.933 89 41 0 472 560 112 200 8.69e-23 104
Msa0617530 AT3G60030.1 55.814 86 38 0 151 236 127 212 5.29e-25 112
Msa0617530 AT3G60030.1 58.904 73 30 0 474 546 127 199 2.03e-22 103
Msa0617530 AT1G20980.1 53.465 101 46 1 137 236 106 206 7.75e-25 111
Msa0617530 AT1G20980.1 58.667 75 31 0 472 546 118 192 9.19e-22 101
Msa0617530 AT1G53160.2 61.644 73 28 0 474 546 54 126 1.25e-24 101
Msa0617530 AT1G53160.2 56.962 79 34 0 151 229 54 132 7.76e-24 99.4
Msa0617530 AT1G53160.1 61.644 73 28 0 474 546 54 126 1.25e-24 101
Msa0617530 AT1G53160.1 56.962 79 34 0 151 229 54 132 7.76e-24 99.4
Msa0617530 AT1G53160.3 56.962 79 34 0 151 229 54 132 1.89e-24 101
Msa0617530 AT1G53160.3 61.644 73 28 0 474 546 54 126 1.89e-24 101
Msa0617530 AT2G47070.1 61.538 78 30 0 151 228 106 183 5.61e-24 108
Msa0617530 AT2G47070.1 60.274 73 29 0 474 546 106 178 2.48e-22 103
Msa0617530 AT3G15270.1 57.534 73 31 0 474 546 63 135 1.06e-23 99.4
Msa0617530 AT3G15270.1 56.757 74 32 0 151 224 63 136 5.66e-23 97.4
Msa0617530 AT5G18830.2 53.333 75 35 0 150 224 137 211 2.55e-19 93.6
Msa0617530 AT5G18830.2 42.727 110 53 2 437 546 111 210 2.88e-18 90.1
Msa0617530 AT5G18830.1 53.333 75 35 0 150 224 137 211 2.64e-19 93.6
Msa0617530 AT5G18830.1 42.727 110 53 2 437 546 111 210 3.28e-18 90.1
Msa0617530 AT5G18830.3 53.333 75 35 0 150 224 137 211 2.73e-19 93.6
Msa0617530 AT5G18830.3 42.727 110 53 2 437 546 111 210 3.49e-18 89.7
Msa0617530 AT1G02065.2 43.434 99 46 2 423 521 147 235 7.47e-17 81.3
Msa0617530 AT1G02065.2 58.929 56 23 0 143 198 180 235 6.02e-16 78.6
Msa0617530 AT2G47070.2 60.377 53 21 0 176 228 2 54 8.27e-13 72.4
Msa0617530 AT2G47070.2 58.333 48 20 0 499 546 2 49 5.43e-11 66.6

Find 130 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTTGGTGGTTGTAATTT+TGG 0.078496 4_2:+68076259 None:intergenic
CAGCTTGGTGGTTGTAATTT+TGG 0.089177 4_2:+68081039 None:intergenic
TTTGGATGTAAAATGGAAAT+TGG 0.200557 4_2:+68074554 None:intergenic
CAAATAGTTCATCGTCAAAT+AGG 0.221746 4_2:-68080918 Msa0617530:CDS
CATGATCTGTTTGAGTTTGA+TGG 0.225842 4_2:-68075614 Msa0617530:CDS
CCAAACCTTTCTTGTGTATC+TGG 0.244468 4_2:-68076133 Msa0617530:CDS
GAAGGACTTTGGATGTAAAA+TGG 0.246221 4_2:+68074547 None:intergenic
CTTGACCGAGAAATCAATTT+CGG 0.268342 4_2:-68076226 Msa0617530:CDS
TGACTTGATTGGAGTGCTTC+AGG 0.279073 4_2:+68080256 None:intergenic
CAGAAATTTCAACTGGAGTA+TGG 0.289118 4_2:-68074177 Msa0617530:CDS
TCAATCTAAGACTTGGTAAA+AGG 0.294020 4_2:-68076099 Msa0617530:CDS
CTCCCTCTTCCCAGTGGGAC+TGG 0.294118 4_2:-68081101 Msa0617530:CDS
TCTGGCTCTGAGTTAATTCA+TGG 0.303523 4_2:-68076172 Msa0617530:CDS
TATAACCACCATGGGAGATT+TGG 0.333181 4_2:+68075868 None:intergenic
ATAAAGCTGATTGGCTTGAT+TGG 0.333859 4_2:+68075519 None:intergenic
CTTGCGTCATCTTTAAGTAT+TGG 0.335589 4_2:-68080736 Msa0617530:CDS
TATAACCACCATAGGAGATT+TGG 0.339545 4_2:+68080591 None:intergenic
ATTAGAATGTTCTTCAGAAA+TGG 0.343450 4_2:+68074344 None:intergenic
ACAACCACCAAACTGGAGTA+TGG 0.348781 4_2:-68076251 Msa0617530:CDS
CAAAATTACAACCACCAAAC+TGG 0.349918 4_2:-68076258 Msa0617530:CDS
AGCTTTACCTGCCACATTGC+TGG 0.352012 4_2:+68080545 None:intergenic
GCAGTCTTGGAATTAGAAAA+TGG 0.356442 4_2:+68074699 None:intergenic
AGCTTTACCTGCTACATTGC+TGG 0.356873 4_2:+68075822 None:intergenic
TCTCCCATGGTGGTTATAGA+TGG 0.357918 4_2:-68075863 Msa0617530:CDS
CATGGTGGTTATAGATGGTT+TGG 0.360015 4_2:-68075858 Msa0617530:CDS
TTGACCGAGAAATCAATTTC+GGG 0.364920 4_2:-68076225 Msa0617530:CDS
ACAAAACTGATTGACTTGAT+TGG 0.364968 4_2:+68080245 None:intergenic
ATCAGAAAAGCATAGAAATT+AGG 0.376805 4_2:+68076367 None:intergenic
ACAACCCGAAATTGATTTCT+CGG 0.376943 4_2:+68076221 None:intergenic
ACAACCTGGCATTGATTTCT+CGG 0.379205 4_2:+68081001 None:intergenic
TCCCTCTTCCCAGTGGGACT+GGG 0.389604 4_2:-68081100 Msa0617530:CDS
CTGATTCATTGCATGAGTTA+TGG 0.392149 4_2:+68074299 None:intergenic
TCACTTTCAGAAATTTCAAC+TGG 0.394391 4_2:-68074184 Msa0617530:CDS
CCCGGTGGAAGTGGTTCTTC+TGG 0.397175 4_2:-68076190 Msa0617530:CDS
CCAGAGCTTTCTTCTGTCTC+TGG 0.403530 4_2:-68080850 Msa0617530:CDS
TCTCCTATGGTGGTTATAGA+TGG 0.407218 4_2:-68080586 Msa0617530:CDS
GGCTAAATTTGTAGCAGTCT+TGG 0.413824 4_2:+68074686 None:intergenic
CTTGCAATTTCCGCGCTGCC+AGG 0.416641 4_2:-68080686 Msa0617530:CDS
AAATAGTTCATCGTCAAATA+GGG 0.430475 4_2:-68080917 Msa0617530:CDS
ACTCTTGGTTGGAAGGACTT+TGG 0.430559 4_2:+68074536 None:intergenic
TTCACAGTTGGAGTTGGAAT+GGG 0.437116 4_2:-68076320 Msa0617530:CDS
CGCTGCCAGGTTGAAGGTTG+TGG 0.443635 4_2:-68080673 Msa0617530:CDS
CATCAAACTCAAACAGATCA+TGG 0.444519 4_2:+68075615 None:intergenic
TTTCCGCGCTGCCAGGTTGA+AGG 0.450558 4_2:-68080679 Msa0617530:CDS
CAGCTTGACGATGATATATA+CGG 0.462985 4_2:+68075543 None:intergenic
CTTCACAGTTGGAGTTGGAA+TGG 0.465688 4_2:-68076321 Msa0617530:CDS
ATTGGTGCTCCCAGTCCCAC+TGG 0.471654 4_2:+68081091 None:intergenic
CCACCACGCTGCCAGGTTGA+AGG 0.471978 4_2:-68075956 Msa0617530:CDS
CGCATATGAATCCCACTGAT+TGG 0.473627 4_2:+68074374 None:intergenic
CTCCCAGTCCCACTGGGAAG+AGG 0.474118 4_2:+68081098 None:intergenic
TCCCTCTTCACAGTTGGAGT+TGG 0.476978 4_2:-68076326 Msa0617530:CDS
CCAGATACACAAGAAAGGTT+TGG 0.481067 4_2:+68076133 None:intergenic
TGTTTGATGCTCCAGCTTGG+TGG 0.481479 4_2:+68081027 None:intergenic
CTCTTGCTTCATCAGAGCCA+TGG 0.481784 4_2:-68074269 Msa0617530:CDS
TTTATCATTTGTATCAGAAA+CGG 0.482839 4_2:+68079050 None:intergenic
CAAAATTACAACCACCAAGC+TGG 0.484604 4_2:-68081038 Msa0617530:CDS
TCAAGTTCCATACTCCAGTT+TGG 0.484691 4_2:+68076244 None:intergenic
TATGGTGGTTATAGATGGTA+TGG 0.485704 4_2:-68080581 Msa0617530:CDS
AACATTCATGTTAACCCAGC+TGG 0.488020 4_2:+68074148 None:intergenic
CTCTTCTGTCAACTAATCCA+TGG 0.493619 4_2:-68079005 Msa0617530:CDS
GCAGTCTCTGAATTAGCAAA+TGG 0.494415 4_2:+68079295 None:intergenic
GATTGATACTCTTGGTTGGA+AGG 0.496148 4_2:+68074529 None:intergenic
TATGATACACCCGGTGGAAG+TGG 0.496488 4_2:-68076199 Msa0617530:CDS
GTGAATAAGATAAAGCTGAT+TGG 0.502891 4_2:+68075510 None:intergenic
AGTTCCATACTCCAGTTTGG+TGG 0.506654 4_2:+68076247 None:intergenic
TCTTGTTTGATGCTCCAGCT+TGG 0.510678 4_2:+68081024 None:intergenic
ACAATGTCCACCACGCTGCC+AGG 0.516200 4_2:-68075963 Msa0617530:CDS
GCCAGAAGAACCACTTCCAC+CGG 0.517418 4_2:+68076189 None:intergenic
ACATTGTAAGTTCTGACCAT+TGG 0.517425 4_2:+68075979 None:intergenic
AAGTCATTCCAAATCTCCTA+TGG 0.520495 4_2:-68080599 Msa0617530:CDS
AACTTTCACGTCACAATGCA+AGG 0.530580 4_2:-68080294 Msa0617530:CDS
GAAAGCATATTGACAGTACT+TGG 0.532864 4_2:+68074585 None:intergenic
ATAACCTGGATTGATACTCT+TGG 0.533141 4_2:+68074521 None:intergenic
GATACACAAGAAAGGTTTGG+TGG 0.536044 4_2:+68076136 None:intergenic
CCTGGATTGATACTCTTGGT+TGG 0.537469 4_2:+68074525 None:intergenic
GAACCATTGCTCACTCTACT+CGG 0.540591 4_2:-68080826 Msa0617530:CDS
TCCAACTCCAACTGTGAAGA+GGG 0.543018 4_2:+68076325 None:intergenic
AACTTTCAAATCACAATGCA+AGG 0.545524 4_2:-68075568 Msa0617530:CDS
TCCCAGTCCCACTGGGAAGA+GGG 0.552029 4_2:+68081099 None:intergenic
AGTTATGGCTTGAAAAGCAC+TGG 0.554669 4_2:+68074314 None:intergenic
CCATTGCTCAATCTAAGACT+TGG 0.554906 4_2:-68076106 Msa0617530:CDS
GTTCACCAGATACACAAGAA+AGG 0.558590 4_2:+68076128 None:intergenic
TCTTCTGTCAACTAATCCAT+GGG 0.562513 4_2:-68079004 Msa0617530:CDS
CATCGAACTCAAACAGATCG+TGG 0.568188 4_2:+68080341 None:intergenic
GATAATCTTTCGCTGATGAA+AGG 0.568732 4_2:+68080644 None:intergenic
CCAGAGACAGAAGAAAGCTC+TGG 0.576248 4_2:+68080850 None:intergenic
CCAACCAAGAGTATCAATCC+AGG 0.578039 4_2:-68074525 Msa0617530:intron
ATTAGAATGTTCTAGAGACA+TGG 0.583823 4_2:+68078963 None:intergenic
GAAAAGAAATGCAAGTCCAA+TGG 0.587403 4_2:-68075995 Msa0617530:CDS
CCAAGTCTTAGATTGAGCAA+TGG 0.590002 4_2:+68076106 None:intergenic
AGTTACGGCTTGAACAGCAC+TGG 0.590790 4_2:+68078933 None:intergenic
CAAGAGCACAACCTTCAACC+TGG 0.591018 4_2:+68075945 None:intergenic
CAAGGCCACAACCTTCAACC+TGG 0.591428 4_2:+68080668 None:intergenic
AATATGTCAATTCCAACATG+TGG 0.594822 4_2:-68074230 Msa0617530:CDS
CTCTTCTGTCAACCAATCAG+TGG 0.597609 4_2:-68074386 Msa0617530:CDS
ACGGCTTGAACAGCACTGGT+TGG 0.597812 4_2:+68078937 None:intergenic
TTAGTCGCATATGAATCCCA+TGG 0.598308 4_2:+68078988 None:intergenic
GCCAGGTTGTTCGATACACC+TGG 0.599245 4_2:-68080988 Msa0617530:CDS
TCTTCTGTCAACCAATCAGT+GGG 0.601400 4_2:-68074385 Msa0617530:CDS
TTCCAACTCCAACTGTGAAG+AGG 0.601663 4_2:+68076324 None:intergenic
AATATCTCCCTCTTCACAGT+TGG 0.605827 4_2:-68076332 Msa0617530:CDS
AGACTGCTACAAATTTAGCC+TGG 0.607461 4_2:-68074683 Msa0617530:CDS
AGACTGCTACAAATTTAGCC+TGG 0.607461 4_2:-68079279 Msa0617530:CDS
AAACCATCTATAACCACCAT+GGG 0.608088 4_2:+68075860 None:intergenic
CCAGAAGAACCACTTCCACC+GGG 0.608276 4_2:+68076190 None:intergenic
GCTTTATCTTATTCACGCAG+TGG 0.608852 4_2:-68075503 Msa0617530:intron
AAGACCGAGAAATCAATGCC+AGG 0.609142 4_2:-68081005 Msa0617530:CDS
ATACCATCTATAACCACCAT+AGG 0.609763 4_2:+68080583 None:intergenic
CCTTCAACCTGGCAGCGTGG+TGG 0.616962 4_2:+68075956 None:intergenic
AGAGTTTGAGATCCACATGT+TGG 0.619666 4_2:+68074218 None:intergenic
TTCGGGTTGTATGATACACC+CGG 0.621273 4_2:-68076208 Msa0617530:CDS
TTGGTGCTCCCAGTCCCACT+GGG 0.623897 4_2:+68081092 None:intergenic
TTTCCGAGTAGAGTGAGCAA+TGG 0.627280 4_2:+68080823 None:intergenic
CTTTCGCTGATGAAAGGTCA+AGG 0.632145 4_2:+68080650 None:intergenic
CAAACCATCTATAACCACCA+TGG 0.633030 4_2:+68075859 None:intergenic
TTAGCCTGGCAAAACATGAA+CGG 0.633733 4_2:-68079265 Msa0617530:CDS
AATATCTCCCTCTTCCCAGT+GGG 0.634960 4_2:-68081106 Msa0617530:CDS
CAATATCTCCCTCTTCCCAG+TGG 0.638747 4_2:-68081107 Msa0617530:CDS
AAGTCATGCCAAATCTCCCA+TGG 0.638950 4_2:-68075876 Msa0617530:CDS
CAACCTTCAACCTGGCAGCG+TGG 0.648763 4_2:+68075953 None:intergenic
TCATTCCAAATCTCCTATGG+TGG 0.656270 4_2:-68080596 Msa0617530:CDS
CAACCTTCAACCTGGCAGCG+CGG 0.659706 4_2:+68080676 None:intergenic
CATGGCTCTGATGAAGCAAG+AGG 0.663007 4_2:+68074270 None:intergenic
CGGAAAACGAGTGTACATTG+AGG 0.675568 4_2:-68080806 Msa0617530:CDS
ACCAGGTGTATCGAACAACC+TGG 0.676238 4_2:+68080987 None:intergenic
AAAGACAACACTAACACACA+AGG 0.691256 4_2:-68079223 Msa0617530:intron
AGGTTGTTCGATACACCTGG+TGG 0.694159 4_2:-68080985 Msa0617530:CDS
TGATCATGATCACTACACCA+TGG 0.714032 4_2:+68074252 None:intergenic
TCATGCCAAATCTCCCATGG+TGG 0.722301 4_2:-68075873 Msa0617530:CDS
GGGTTGTATGATACACCCGG+TGG 0.736684 4_2:-68076205 Msa0617530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTTTTTTTTTTTTT+TGG - chr4_2:68074800-68074819 Msa0617530:intron 0.0%
!!! ATATTTTAAAAAAAAATTTT+GGG - chr4_2:68077674-68077693 Msa0617530:intron 0.0%
!! ATGCAAAAAAAATTAAATTA+TGG - chr4_2:68077434-68077453 Msa0617530:intron 10.0%
!! TGCAAAAAAAATTAAATTAT+GGG - chr4_2:68077435-68077454 Msa0617530:intron 10.0%
!!! ATGACTTATTTAATTTTTTT+GGG + chr4_2:68077461-68077480 None:intergenic 10.0%
!!! AATGACTTATTTAATTTTTT+TGG + chr4_2:68077462-68077481 None:intergenic 10.0%
!! TATTATTAAAAATTACACTT+TGG - chr4_2:68077493-68077512 Msa0617530:intron 10.0%
!! TATTATTAAAAATTACACTT+TGG - chr4_2:68077493-68077512 Msa0617530:intron 10.0%
!! AAATAATTATCATGATTGTT+TGG - chr4_2:68075668-68075687 Msa0617530:intron 15.0%
!!! ATTCACTTTTAGTTTTTTAT+AGG - chr4_2:68075829-68075848 Msa0617530:intron 15.0%
!!! GTTTATTGTAGTTTTTTTAT+AGG - chr4_2:68075851-68075870 Msa0617530:CDS 15.0%
!!! TTCTAACTTCTAATATATTT+TGG - chr4_2:68075932-68075951 Msa0617530:CDS 15.0%
!!! AAACATTTTTTATTTTCAGT+TGG + chr4_2:68077017-68077036 None:intergenic 15.0%
!! ATTATTTAGTAACAACAATA+TGG - chr4_2:68077265-68077284 Msa0617530:intron 15.0%
!! ATAAATAGTAATTAATAGAG+TGG + chr4_2:68078272-68078291 None:intergenic 15.0%
!! ACTCTATTAATTACTATTTA+TGG - chr4_2:68078271-68078290 Msa0617530:intron 15.0%
!! ATTTATTTCATAGATCTTAT+TGG - chr4_2:68080121-68080140 Msa0617530:intron 15.0%
!!! TTCTATCTTCTAATATATTT+TGG - chr4_2:68080528-68080547 Msa0617530:intron 15.0%
!!! TTTAGTTTCATAGATCTTAT+TGG - chr4_2:68075375-68075394 Msa0617530:intron 20.0%
!! ATAATTACTTATTGTCAGAA+AGG - chr4_2:68075531-68075550 Msa0617530:CDS 20.0%
!!! GTTGTTTTTTTTACAAAATC+AGG + chr4_2:68075770-68075789 None:intergenic 20.0%
!! TTTATCATTTGTATCAGAAA+CGG + chr4_2:68076231-68076250 None:intergenic 20.0%
!! TAGTTAAAACCAGAAAAATA+AGG + chr4_2:68076477-68076496 None:intergenic 20.0%
!! TCTCAACCTAATAAATTTAT+AGG - chr4_2:68076531-68076550 Msa0617530:intron 20.0%
!! TTAGGTCCTATAAATTTATT+AGG + chr4_2:68076540-68076559 None:intergenic 20.0%
!! AGTCATTACAACAAAAATTT+AGG + chr4_2:68076558-68076577 None:intergenic 20.0%
!!! TTAACTGCATTTTCAAAAAA+GGG - chr4_2:68076668-68076687 Msa0617530:intron 20.0%
!! ATATGAAAATAATTCCAAAC+GGG + chr4_2:68076772-68076791 None:intergenic 20.0%
!! GATATGAAAATAATTCCAAA+CGG + chr4_2:68076773-68076792 None:intergenic 20.0%
!! AATTAATTAGTAGTACAACA+TGG - chr4_2:68076931-68076950 Msa0617530:intron 20.0%
!! ATATAAATAACAGATGACAA+GGG + chr4_2:68077056-68077075 None:intergenic 20.0%
!! TATATAAATAACAGATGACA+AGG + chr4_2:68077057-68077076 None:intergenic 20.0%
!!! TGTATATAGATTTGTTCTTT+AGG + chr4_2:68077211-68077230 None:intergenic 20.0%
!! TATTAAAAATTACACTTTGG+TGG - chr4_2:68077496-68077515 Msa0617530:intron 20.0%
!! ATTAAAAATTACACTTTGGT+GGG - chr4_2:68077497-68077516 Msa0617530:intron 20.0%
!! TATTAAAAATTACACTTTGG+TGG - chr4_2:68077496-68077515 Msa0617530:intron 20.0%
!! ATTAAAAATTACACTTTGGT+GGG - chr4_2:68077497-68077516 Msa0617530:intron 20.0%
!! GCTAAACATATTGAAATTAT+TGG - chr4_2:68077614-68077633 Msa0617530:intron 20.0%
!! ATATGTAAGACACTAAATAA+TGG + chr4_2:68077658-68077677 None:intergenic 20.0%
!! TAATTAACATATCGAATTGA+CGG + chr4_2:68077853-68077872 None:intergenic 20.0%
!! TAAAATTCAAAAAAGAAGAG+AGG + chr4_2:68078203-68078222 None:intergenic 20.0%
!! ATAATAGTTTAAGTAAAGAC+TGG - chr4_2:68078336-68078355 Msa0617530:intron 20.0%
!! TCTAATTGCAAATGAAAAAA+TGG + chr4_2:68078546-68078565 None:intergenic 20.0%
!!! CAAAAATCTTTCTTTTTCAA+GGG - chr4_2:68079237-68079256 Msa0617530:CDS 20.0%
!!! TAGATAGTTGATTTAGTTAA+AGG - chr4_2:68080201-68080220 Msa0617530:intron 20.0%
!! AATCTAGTTAGTAAATACTT+CGG + chr4_2:68080342-68080361 None:intergenic 20.0%
! AAATAGTTCATCGTCAAATA+GGG - chr4_2:68074361-68074380 Msa0617530:CDS 25.0%
!!! AAAACATGTATTTTTGCTTG+TGG - chr4_2:68074392-68074411 Msa0617530:CDS 25.0%
!!! AGGTTTTTGGAATTACTTTT+CGG + chr4_2:68074506-68074525 None:intergenic 25.0%
!!! CAAAAACCTATCTTTTTCAA+GGG - chr4_2:68074517-68074536 Msa0617530:intron 25.0%
! TGTTTCAATGTAATTGACAT+AGG - chr4_2:68074774-68074793 Msa0617530:intron 25.0%
!! TATTGCTATATTTAGAGTTG+TGG - chr4_2:68075555-68075574 Msa0617530:CDS 25.0%
!! ATTGCTATATTTAGAGTTGT+GGG - chr4_2:68075556-68075575 Msa0617530:CDS 25.0%
! TTGTATCATATGCCTTAATA+AGG + chr4_2:68075650-68075669 None:intergenic 25.0%
!!! CAAAATCAGGTTTTAAAGAA+TGG + chr4_2:68075757-68075776 None:intergenic 25.0%
! AACTAAAAGTGAATGTTCTT+TGG + chr4_2:68075823-68075842 None:intergenic 25.0%
!!! TTTATTAGGTTGAGACTATT+TGG + chr4_2:68076526-68076545 None:intergenic 25.0%
!! CTTAACTGCATTTTCAAAAA+AGG - chr4_2:68076667-68076686 Msa0617530:intron 25.0%
!! TAACTGCATTTTCAAAAAAG+GGG - chr4_2:68076669-68076688 Msa0617530:intron 25.0%
! ACCTTCAATAAAGGATTTAA+AGG - chr4_2:68076816-68076835 Msa0617530:intron 25.0%
! TCCTTTAAATCCTTTATTGA+AGG + chr4_2:68076820-68076839 None:intergenic 25.0%
!! ACAAAACAATAGGTTTTCAT+TGG + chr4_2:68076880-68076899 None:intergenic 25.0%
!!! ATGAAAACCTATTGTTTTGT+TGG - chr4_2:68076880-68076899 Msa0617530:intron 25.0%
! AAAATATCCTTATAATCGTG+AGG + chr4_2:68076909-68076928 None:intergenic 25.0%
! GATAAATTGTAGTTTCTCAT+TGG - chr4_2:68076953-68076972 Msa0617530:intron 25.0%
! AAGAAGAAGAAAGTTGAAAA+GGG + chr4_2:68077116-68077135 None:intergenic 25.0%
!!! CATATCTATTTTGTTTGCAT+GGG + chr4_2:68077305-68077324 None:intergenic 25.0%
!!! ACATATCTATTTTGTTTGCA+TGG + chr4_2:68077306-68077325 None:intergenic 25.0%
! ATCCCTTATAAAACTAAAAC+CGG + chr4_2:68077416-68077435 None:intergenic 25.0%
!! GTCTTTGAAAAAGAGAAAAT+AGG + chr4_2:68078309-68078328 None:intergenic 25.0%
!!! TTGTGTTTGTCTTCTTTTTT+TGG - chr4_2:68078385-68078404 Msa0617530:intron 25.0%
!! AAACAAGGAAAAGTATAACA+GGG + chr4_2:68078823-68078842 None:intergenic 25.0%
!!! TTAGCATTGATAATCTCATT+TGG - chr4_2:68078865-68078884 Msa0617530:intron 25.0%
!! ATCAGAAAAGCATAGAAATT+AGG + chr4_2:68078914-68078933 None:intergenic 25.0%
!! TAATTTCTATGCTTTTCTGA+TGG - chr4_2:68078913-68078932 Msa0617530:intron 25.0%
!! CTTTTGTATTAAGTAATGGT+AGG + chr4_2:68078988-68079007 None:intergenic 25.0%
!!! GTTGCTTTTGTATTAAGTAA+TGG + chr4_2:68078992-68079011 None:intergenic 25.0%
!! CCTTGAAAAAGAAAGATTTT+TGG + chr4_2:68079239-68079258 None:intergenic 25.0%
!!! CCAAAAATCTTTCTTTTTCA+AGG - chr4_2:68079236-68079255 Msa0617530:CDS 25.0%
! ATGAAATGTAGAAATCTAAG+AGG - chr4_2:68079877-68079896 Msa0617530:intron 25.0%
!!! ATGATTAAACTTTTGAGTTG+TGG - chr4_2:68080176-68080195 Msa0617530:intron 25.0%
!!! AGTTGTATTTTTACTAAACC+AGG + chr4_2:68080390-68080409 None:intergenic 25.0%
! TTTGGATGTAAAATGGAAAT+TGG + chr4_2:68080727-68080746 None:intergenic 25.0%
! AAAAAATCAGCACAAAAATG+TGG + chr4_2:68080796-68080815 None:intergenic 25.0%
!!! TGATTTTTTTTTACTCTTGC+AGG - chr4_2:68080807-68080826 Msa0617530:CDS 25.0%
! ATTAGAATGTTCTTCAGAAA+TGG + chr4_2:68080937-68080956 None:intergenic 25.0%
CAAATAGTTCATCGTCAAAT+AGG - chr4_2:68074360-68074379 Msa0617530:CDS 30.0%
! CCTTGAAAAAGATAGGTTTT+TGG + chr4_2:68074519-68074538 None:intergenic 30.0%
!! CCAAAAACCTATCTTTTTCA+AGG - chr4_2:68074516-68074535 Msa0617530:intron 30.0%
!!! AACTTGCTGTCTTTTTTGAA+TGG - chr4_2:68074882-68074901 Msa0617530:intron 30.0%
!! ACAAAACTGATTGACTTGAT+TGG + chr4_2:68075036-68075055 None:intergenic 30.0%
!! TTCTGCTTGTTATCTATGTT+TGG - chr4_2:68075108-68075127 Msa0617530:intron 30.0%
!! TCTGCTTGTTATCTATGTTT+GGG - chr4_2:68075109-68075128 Msa0617530:intron 30.0%
AAAGCTGAAAAGATGAAATG+TGG - chr4_2:68075136-68075155 Msa0617530:intron 30.0%
GCAATGTTTATTGTCAACTA+AGG + chr4_2:68075186-68075205 None:intergenic 30.0%
ATGAGCAGAACTAAAAAGAT+AGG + chr4_2:68075349-68075368 None:intergenic 30.0%
! CCTTAATTCTCTAAAGACTT+AGG + chr4_2:68075618-68075637 None:intergenic 30.0%
! CCTAAGTCTTTAGAGAATTA+AGG - chr4_2:68075615-68075634 Msa0617530:CDS 30.0%
! TGTTAGTGTTGTCTTTTGTT+TGG + chr4_2:68076051-68076070 None:intergenic 30.0%
TTTGGATGTAAAATGGACAA+CGG + chr4_2:68076107-68076126 None:intergenic 30.0%
CAAGAACTTTGGATGTAAAA+TGG + chr4_2:68076114-68076133 None:intergenic 30.0%
! TAACCTCAATTGGATACTTT+TGG + chr4_2:68076140-68076159 None:intergenic 30.0%
AAACGTGAAATAACCTCAAT+TGG + chr4_2:68076150-68076169 None:intergenic 30.0%
ACAAATCAGCACAAAAAATG+TGG + chr4_2:68076177-68076196 None:intergenic 30.0%
!! CTGATTTGTTATAACTTTGC+AGG - chr4_2:68076188-68076207 Msa0617530:CDS 30.0%
!! ATTAGAATGTTCTAGAGACA+TGG + chr4_2:68076318-68076337 None:intergenic 30.0%
CATGATTCTGATTAAACAAG+AGG + chr4_2:68076392-68076411 None:intergenic 30.0%
! CTCTTGTTTAATCAGAATCA+TGG - chr4_2:68076390-68076409 Msa0617530:intron 30.0%
!!! TTGAGAGAACCTTATTTTTC+TGG - chr4_2:68076465-68076484 Msa0617530:intron 30.0%
AGAAGAAGAAAGTTGAAAAG+GGG + chr4_2:68077115-68077134 None:intergenic 30.0%
GAAGAAGAAGAAAGTTGAAA+AGG + chr4_2:68077117-68077136 None:intergenic 30.0%
ATAAAAATGCAGCGAACTAA+GGG + chr4_2:68077164-68077183 None:intergenic 30.0%
TATAAAAATGCAGCGAACTA+AGG + chr4_2:68077165-68077184 None:intergenic 30.0%
!!! GGTTTTAGAAAAGTAAGCAA+AGG + chr4_2:68077190-68077209 None:intergenic 30.0%
TCCCTTATAAAACTAAAACC+GGG + chr4_2:68077415-68077434 None:intergenic 30.0%
!! TTAGTTATTAAGTTGACCGT+TGG + chr4_2:68077768-68077787 None:intergenic 30.0%
!! AACGTTGTTTGTTGTTTGAA+TGG + chr4_2:68078030-68078049 None:intergenic 30.0%
!! ATGATGTTTTGAATAGTGAC+AGG + chr4_2:68078087-68078106 None:intergenic 30.0%
TAAAGGAAAAACAGAGAAAG+AGG + chr4_2:68078179-68078198 None:intergenic 30.0%
CAAAAAAGAAGAGAGGATAA+AGG + chr4_2:68078196-68078215 None:intergenic 30.0%
AACATCAACTAAACAGTTAC+TGG + chr4_2:68078505-68078524 None:intergenic 30.0%
!! TTAATCCATTTTTCTTGCCT+TGG - chr4_2:68078623-68078642 Msa0617530:intron 30.0%
AACACCATTAATATTTGCCA+AGG + chr4_2:68078643-68078662 None:intergenic 30.0%
! GAAACAAGGAAAAGTATAAC+AGG + chr4_2:68078824-68078843 None:intergenic 30.0%
! GCTTTTCTAATCTAGAAACA+AGG + chr4_2:68078838-68078857 None:intergenic 30.0%
!! AGTTTGGTGGTTGTAATTTT+GGG + chr4_2:68079021-68079040 None:intergenic 30.0%
! TCAATCTAAGACTTGGTAAA+AGG - chr4_2:68079179-68079198 Msa0617530:intron 30.0%
! TGGTAAAAGGATGTATTTTG+AGG - chr4_2:68079192-68079211 Msa0617530:intron 30.0%
!!! AGATTTTTGGAATCACTTTC+TGG + chr4_2:68079226-68079245 None:intergenic 30.0%
! TTTGCGATGATAATCTTTTG+CGG + chr4_2:68079368-68079387 None:intergenic 30.0%
!! AATCTAATTCAACTTGCTGT+TGG - chr4_2:68079588-68079607 Msa0617530:intron 30.0%
! CACTTTTCTTAAAATGCTGA+AGG - chr4_2:68079638-68079657 Msa0617530:intron 30.0%
AACTTTCAAATCACAATGCA+AGG - chr4_2:68079710-68079729 Msa0617530:intron 30.0%
GTGAATAAGATAAAGCTGAT+TGG + chr4_2:68079771-68079790 None:intergenic 30.0%
GCAATGTTAATAGTCAACTA+AGG + chr4_2:68079923-68079942 None:intergenic 30.0%
AAACTCTTGAGTAAATAAGC+AGG + chr4_2:68080000-68080019 None:intergenic 30.0%
CTTACAAGAGGTTAAAAGAT+AGG + chr4_2:68080086-68080105 None:intergenic 30.0%
AAATGAACAGAACTTACAAG+AGG + chr4_2:68080098-68080117 None:intergenic 30.0%
! ATTTTCAATCGTCATACATC+TGG - chr4_2:68080144-68080163 Msa0617530:intron 30.0%
ACATGGTTAAGATCCTAATT+GGG - chr4_2:68080230-68080249 Msa0617530:intron 30.0%
TTATCCTGATTGTTAGAGTT+TGG - chr4_2:68080288-68080307 Msa0617530:CDS 30.0%
!! TCCACTTTTGGTTGTTTTAT+AGG - chr4_2:68080447-68080466 Msa0617530:intron 30.0%
ACCTATAAAACAACCAAAAG+TGG + chr4_2:68080451-68080470 None:intergenic 30.0%
AATATGTCAATTCCAACATG+TGG - chr4_2:68081048-68081067 Msa0617530:CDS 30.0%
TCACTTTCAGAAATTTCAAC+TGG - chr4_2:68081094-68081113 Msa0617530:CDS 30.0%
! CTTTTGTGTGGAAGAATGAT+TGG + chr4_2:68074208-68074227 None:intergenic 35.0%
!!! GATTTTCAGTTGCTTTTGTG+TGG + chr4_2:68074220-68074239 None:intergenic 35.0%
!!! ATATTTTTGGCTCTGCATCA+AGG - chr4_2:68074321-68074340 Msa0617530:CDS 35.0%
CAAGATCCCTTGAAAAAGAT+AGG + chr4_2:68074526-68074545 None:intergenic 35.0%
CTTGCGTCATCTTTAAGTAT+TGG - chr4_2:68074542-68074561 Msa0617530:CDS 35.0%
GATAATCTTTCGCTGATGAA+AGG + chr4_2:68074637-68074656 None:intergenic 35.0%
AAGTCATTCCAAATCTCCTA+TGG - chr4_2:68074679-68074698 Msa0617530:CDS 35.0%
TATAACCACCATAGGAGATT+TGG + chr4_2:68074690-68074709 None:intergenic 35.0%
ATACCATCTATAACCACCAT+AGG + chr4_2:68074698-68074717 None:intergenic 35.0%
TATGGTGGTTATAGATGGTA+TGG - chr4_2:68074697-68074716 Msa0617530:CDS 35.0%
TTATTTGCTTCGAATGCTGA+AGG - chr4_2:68074912-68074931 Msa0617530:intron 35.0%
CAACTAAGGTATGCATAACA+TGG + chr4_2:68075172-68075191 None:intergenic 35.0%
AAACTCTTACGCAAATAAGC+AGG + chr4_2:68075263-68075282 None:intergenic 35.0%
GTTTACCTTGCAAGTTACAA+TGG - chr4_2:68075279-68075298 Msa0617530:intron 35.0%
! AATGTCCATTGTAACTTGCA+AGG + chr4_2:68075287-68075306 None:intergenic 35.0%
!! AACATGACTGTTACTTTGCA+TGG + chr4_2:68075504-68075523 None:intergenic 35.0%
! ATATTTAGAGTTGTGGGATG+AGG - chr4_2:68075562-68075581 Msa0617530:CDS 35.0%
TGAGGACTGGATATAGTTAA+AGG - chr4_2:68075580-68075599 Msa0617530:CDS 35.0%
GTTAGTAAAGACTTCAGCTT+AGG + chr4_2:68075716-68075735 None:intergenic 35.0%
!!! ATATATTTTGGTTCCGCAGA+TGG - chr4_2:68075944-68075963 Msa0617530:CDS 35.0%
AAAGACAACACTAACACACA+AGG - chr4_2:68076055-68076074 Msa0617530:CDS 35.0%
!! ACTTTTGGTTGCAAGAACTT+TGG + chr4_2:68076125-68076144 None:intergenic 35.0%
!! CAACCAAAAGTATCCAATTG+AGG - chr4_2:68076134-68076153 Msa0617530:CDS 35.0%
TCTTCTGTCAACTAATCCAT+GGG - chr4_2:68076274-68076293 Msa0617530:CDS 35.0%
TTATTATCTCTCTCTTCTCG+TGG - chr4_2:68076582-68076601 Msa0617530:intron 35.0%
GAGAAACACGAAACAATTCT+GGG - chr4_2:68076614-68076633 Msa0617530:intron 35.0%
!! ACGTTGGTAACCTTCAATAA+AGG - chr4_2:68076807-68076826 Msa0617530:intron 35.0%
ATATCCTTATAATCGTGAGG+TGG + chr4_2:68076906-68076925 None:intergenic 35.0%
TGTAGTTTCTCATTGGATGT+CGG - chr4_2:68076960-68076979 Msa0617530:intron 35.0%
! ACAGATGACAAGGGTTATTT+TGG + chr4_2:68077047-68077066 None:intergenic 35.0%
!! GGCCTATGAATTTGTTAAGA+CGG + chr4_2:68077394-68077413 None:intergenic 35.0%
TCTTAACAAATTCATAGGCC+CGG - chr4_2:68077394-68077413 Msa0617530:intron 35.0%
!!! GCCCGGTTTTAGTTTTATAA+GGG - chr4_2:68077411-68077430 Msa0617530:intron 35.0%
AAAAATTACACTTTGGTGGG+TGG - chr4_2:68077500-68077519 Msa0617530:intron 35.0%
! AAAATTACACTTTGGTGGGT+GGG - chr4_2:68077501-68077520 Msa0617530:intron 35.0%
AAAAATTACACTTTGGTGGG+TGG - chr4_2:68077500-68077519 Msa0617530:intron 35.0%
! AAAATTACACTTTGGTGGGT+GGG - chr4_2:68077501-68077520 Msa0617530:intron 35.0%
TTTGTTGAGTGAGAGGTAAT+GGG + chr4_2:68077571-68077590 None:intergenic 35.0%
! TTTTGTTGAGTGAGAGGTAA+TGG + chr4_2:68077572-68077591 None:intergenic 35.0%
! GATAGTTTTTGTTGAGTGAG+AGG + chr4_2:68077578-68077597 None:intergenic 35.0%
! AATTTTGGGCCCCAAAAAAT+TGG - chr4_2:68077688-68077707 Msa0617530:intron 35.0%
!! TTATTAAGTTGACCGTTGGT+CGG + chr4_2:68077764-68077783 None:intergenic 35.0%
TAACATATCGAATTGACGGA+AGG + chr4_2:68077849-68077868 None:intergenic 35.0%
! ACATTGAACTAGCCTACTTA+AGG - chr4_2:68077887-68077906 Msa0617530:intron 35.0%
!!! ATGGTTTTGTCTTTTCTGGT+GGG - chr4_2:68077949-68077968 Msa0617530:intron 35.0%
!! ATGTTTTGAATAGTGACAGG+TGG + chr4_2:68078084-68078103 None:intergenic 35.0%
ATTTGCCAAGGCAAGAAAAA+TGG + chr4_2:68078631-68078650 None:intergenic 35.0%
CTTGCCTTGGCAAATATTAA+TGG - chr4_2:68078636-68078655 Msa0617530:intron 35.0%
!! CAGTTTGGTGGTTGTAATTT+TGG + chr4_2:68079022-68079041 None:intergenic 35.0%
CAAAATTACAACCACCAAAC+TGG - chr4_2:68079020-68079039 Msa0617530:CDS 35.0%
CTTGACCGAGAAATCAATTT+CGG - chr4_2:68079052-68079071 Msa0617530:CDS 35.0%
TTGACCGAGAAATCAATTTC+GGG - chr4_2:68079053-68079072 Msa0617530:CDS 35.0%
! ACAACCCGAAATTGATTTCT+CGG + chr4_2:68079060-68079079 None:intergenic 35.0%
GAAAAGAAATGCAAGTCCAA+TGG - chr4_2:68079283-68079302 Msa0617530:CDS 35.0%
! ACATTGTAAGTTCTGACCAT+TGG + chr4_2:68079302-68079321 None:intergenic 35.0%
AAACCATCTATAACCACCAT+GGG + chr4_2:68079421-68079440 None:intergenic 35.0%
CATCAAACTCAAACAGATCA+TGG + chr4_2:68079666-68079685 None:intergenic 35.0%
! CATGATCTGTTTGAGTTTGA+TGG - chr4_2:68079664-68079683 Msa0617530:intron 35.0%
CAGCTTGACGATGATATATA+CGG + chr4_2:68079738-68079757 None:intergenic 35.0%
!! ATAAAGCTGATTGGCTTGAT+TGG + chr4_2:68079762-68079781 None:intergenic 35.0%
! TTAGTTAAAGGCACAAGACA+TGG - chr4_2:68080213-68080232 Msa0617530:intron 35.0%
GACATGGTTAAGATCCTAAT+TGG - chr4_2:68080229-68080248 Msa0617530:intron 35.0%
CATGGTTAAGATCCTAATTG+GGG - chr4_2:68080231-68080250 Msa0617530:intron 35.0%
ATGTCCAAACTCTAACAATC+AGG + chr4_2:68080295-68080314 None:intergenic 35.0%
GTTAGTAAATACTTCGGCTT+AGG + chr4_2:68080336-68080355 None:intergenic 35.0%
CTAAACCAGGTATTAACGAA+TGG + chr4_2:68080377-68080396 None:intergenic 35.0%
AACCAAAAGTGGATGTTCTT+TGG + chr4_2:68080440-68080459 None:intergenic 35.0%
GCAGTCTTGGAATTAGAAAA+TGG + chr4_2:68080582-68080601 None:intergenic 35.0%
! AAGGGAAAATCTTTTGCTTG+GGG + chr4_2:68080645-68080664 None:intergenic 35.0%
! CAAGGGAAAATCTTTTGCTT+GGG + chr4_2:68080646-68080665 None:intergenic 35.0%
! TCAAGGGAAAATCTTTTGCT+TGG + chr4_2:68080647-68080666 None:intergenic 35.0%
! GAAAGCATATTGACAGTACT+TGG + chr4_2:68080696-68080715 None:intergenic 35.0%
GAAGGACTTTGGATGTAAAA+TGG + chr4_2:68080734-68080753 None:intergenic 35.0%
ATAACCTGGATTGATACTCT+TGG + chr4_2:68080760-68080779 None:intergenic 35.0%
GCAATAAACGTGAAATAACC+TGG + chr4_2:68076155-68076174 None:intergenic 35.0%
CTGATTCATTGCATGAGTTA+TGG + chr4_2:68080982-68081001 None:intergenic 35.0%
CAGAAATTTCAACTGGAGTA+TGG - chr4_2:68081101-68081120 Msa0617530:CDS 35.0%
!! CAGCTTGGTGGTTGTAATTT+TGG + chr4_2:68074242-68074261 None:intergenic 40.0%
CAAAATTACAACCACCAAGC+TGG - chr4_2:68074240-68074259 Msa0617530:CDS 40.0%
!! ACAACCTGGCATTGATTTCT+CGG + chr4_2:68074280-68074299 None:intergenic 40.0%
CCAAAAATATCACTTCCACC+AGG + chr4_2:68074311-68074330 None:intergenic 40.0%
! CCTGGTGGAAGTGATATTTT+TGG - chr4_2:68074308-68074327 Msa0617530:CDS 40.0%
TCATTCCAAATCTCCTATGG+TGG - chr4_2:68074682-68074701 Msa0617530:CDS 40.0%
TCTCCTATGGTGGTTATAGA+TGG - chr4_2:68074692-68074711 Msa0617530:CDS 40.0%
AACTTTCACGTCACAATGCA+AGG - chr4_2:68074984-68075003 Msa0617530:intron 40.0%
TCAACTGTCATACGTTTCGA+TGG - chr4_2:68075402-68075421 Msa0617530:intron 40.0%
CATACGTTTCGATGGTAAAG+AGG - chr4_2:68075410-68075429 Msa0617530:intron 40.0%
AGGTAGCGTACTCCTTATTA+AGG - chr4_2:68075635-68075654 Msa0617530:intron 40.0%
GCAGTCTCTGAATTAGCAAA+TGG + chr4_2:68075986-68076005 None:intergenic 40.0%
AGACTGCTACAAATTTAGCC+TGG - chr4_2:68075999-68076018 Msa0617530:CDS 40.0%
TTAGCCTGGCAAAACATGAA+CGG - chr4_2:68076013-68076032 Msa0617530:CDS 40.0%
!! CTTTTGTTTGGAAGAGCTTG+CGG + chr4_2:68076039-68076058 None:intergenic 40.0%
CTCTTCTGTCAACTAATCCA+TGG - chr4_2:68076273-68076292 Msa0617530:CDS 40.0%
TTAGTCGCATATGAATCCCA+TGG + chr4_2:68076293-68076312 None:intergenic 40.0%
CTGACTCATTGCATGAGTTA+CGG + chr4_2:68076363-68076382 None:intergenic 40.0%
AACATGTCAATTCCAGCATG+TGG - chr4_2:68076415-68076434 Msa0617530:intron 40.0%
ACATTATGAGATCCACATGC+TGG + chr4_2:68076430-68076449 None:intergenic 40.0%
CGAGAAACACGAAACAATTC+TGG - chr4_2:68076613-68076632 Msa0617530:intron 40.0%
TGTCATATGTCAAAGTGCAG+TGG - chr4_2:68076726-68076745 Msa0617530:intron 40.0%
!!! TGAACATTTTAGAGCCCGTT+TGG - chr4_2:68076755-68076774 Msa0617530:intron 40.0%
TCATTTCTGTTTCCAGACGT+TGG - chr4_2:68076791-68076810 Msa0617530:intron 40.0%
TATTGAAGGTTACCAACGTC+TGG + chr4_2:68076806-68076825 None:intergenic 40.0%
GCTACAATTGGCATTAGAAC+AGG + chr4_2:68077093-68077112 None:intergenic 40.0%
AGTTGAAAAGGGGCTACAAT+TGG + chr4_2:68077105-68077124 None:intergenic 40.0%
GGCCGTCTTAACAAATTCAT+AGG - chr4_2:68077389-68077408 Msa0617530:intron 40.0%
!!! GGCCCGGTTTTAGTTTTATA+AGG - chr4_2:68077410-68077429 Msa0617530:intron 40.0%
ATATGTTTAGCGTGCTTCAG+TGG + chr4_2:68077605-68077624 None:intergenic 40.0%
AAGCTACTTCGTCCTTAAGT+AGG + chr4_2:68077902-68077921 None:intergenic 40.0%
ACTGAGGGTAGTAAAGAAGA+AGG - chr4_2:68077922-68077941 Msa0617530:intron 40.0%
TAGTAAAGAAGAAGGCTGGA+TGG - chr4_2:68077930-68077949 Msa0617530:intron 40.0%
!!! CTGGATGGTTTTGTCTTTTC+TGG - chr4_2:68077945-68077964 Msa0617530:intron 40.0%
!!! GATGGTTTTGTCTTTTCTGG+TGG - chr4_2:68077948-68077967 Msa0617530:intron 40.0%
AAAGCAGTGTTCCAACCATT+TGG + chr4_2:68078005-68078024 None:intergenic 40.0%
! TTTTGAATAGTGACAGGTGG+TGG + chr4_2:68078081-68078100 None:intergenic 40.0%
AATATCTCCCTCTTCACAGT+TGG - chr4_2:68078946-68078965 Msa0617530:CDS 40.0%
TTCACAGTTGGAGTTGGAAT+GGG - chr4_2:68078958-68078977 Msa0617530:CDS 40.0%
TCAAGTTCCATACTCCAGTT+TGG + chr4_2:68079037-68079056 None:intergenic 40.0%
!! TCTGGCTCTGAGTTAATTCA+TGG - chr4_2:68079106-68079125 Msa0617530:intron 40.0%
GATACACAAGAAAGGTTTGG+TGG + chr4_2:68079145-68079164 None:intergenic 40.0%
CCAGATACACAAGAAAGGTT+TGG + chr4_2:68079148-68079167 None:intergenic 40.0%
CCAAACCTTTCTTGTGTATC+TGG - chr4_2:68079145-68079164 Msa0617530:intron 40.0%
GTTCACCAGATACACAAGAA+AGG + chr4_2:68079153-68079172 None:intergenic 40.0%
CCAAGTCTTAGATTGAGCAA+TGG + chr4_2:68079175-68079194 None:intergenic 40.0%
! CCATTGCTCAATCTAAGACT+TGG - chr4_2:68079172-68079191 Msa0617530:intron 40.0%
TATAACCACCATGGGAGATT+TGG + chr4_2:68079413-68079432 None:intergenic 40.0%
CAAACCATCTATAACCACCA+TGG + chr4_2:68079422-68079441 None:intergenic 40.0%
CATGGTGGTTATAGATGGTT+TGG - chr4_2:68079420-68079439 Msa0617530:intron 40.0%
GCTTTATCTTATTCACGCAG+TGG - chr4_2:68079775-68079794 Msa0617530:intron 40.0%
CAACTAAGGCATGCATAACA+TGG + chr4_2:68079909-68079928 None:intergenic 40.0%
! AATGTCTCGTGTAACTTGCA+AGG + chr4_2:68080024-68080043 None:intergenic 40.0%
TCAATCGTCATACATCTGGA+TGG - chr4_2:68080148-68080167 Msa0617530:intron 40.0%
! AAGAGTATGCTACCCCAATT+AGG + chr4_2:68080246-68080265 None:intergenic 40.0%
GTATGCCATTCGTTAATACC+TGG - chr4_2:68080369-68080388 Msa0617530:intron 40.0%
! GACCAAAGAACATCCACTTT+TGG - chr4_2:68080435-68080454 Msa0617530:intron 40.0%
GGCTAAATTTGTAGCAGTCT+TGG + chr4_2:68075999-68076018 None:intergenic 40.0%
AGACTGCTACAAATTTAGCC+TGG - chr4_2:68075999-68076018 Msa0617530:CDS 40.0%
! AGGGAAAATCTTTTGCTTGG+GGG + chr4_2:68080644-68080663 None:intergenic 40.0%
! TTGTCTTTTGCAGGCTTCAA+GGG + chr4_2:68080663-68080682 None:intergenic 40.0%
! GTGTCAATGTTGTCTTTTGC+AGG + chr4_2:68080672-68080691 None:intergenic 40.0%
GATTGATACTCTTGGTTGGA+AGG + chr4_2:68080752-68080771 None:intergenic 40.0%
TCTTCTGTCAACCAATCAGT+GGG - chr4_2:68080893-68080912 Msa0617530:CDS 40.0%
! AGTTATGGCTTGAAAAGCAC+TGG + chr4_2:68080967-68080986 None:intergenic 40.0%
TGATCATGATCACTACACCA+TGG + chr4_2:68081029-68081048 None:intergenic 40.0%
! AGAGTTTGAGATCCACATGT+TGG + chr4_2:68081063-68081082 None:intergenic 40.0%
AATATCTCCCTCTTCCCAGT+GGG - chr4_2:68074172-68074191 Msa0617530:CDS 45.0%
! TCTTGTTTGATGCTCCAGCT+TGG + chr4_2:68074257-68074276 None:intergenic 45.0%
AAGACCGAGAAATCAATGCC+AGG - chr4_2:68074273-68074292 Msa0617530:CDS 45.0%
GAACCATTGCTCACTCTACT+CGG - chr4_2:68074452-68074471 Msa0617530:CDS 45.0%
TTTCCGAGTAGAGTGAGCAA+TGG + chr4_2:68074458-68074477 None:intergenic 45.0%
CGGAAAACGAGTGTACATTG+AGG - chr4_2:68074472-68074491 Msa0617530:intron 45.0%
CTTTCGCTGATGAAAGGTCA+AGG + chr4_2:68074631-68074650 None:intergenic 45.0%
CATCGAACTCAAACAGATCG+TGG + chr4_2:68074940-68074959 None:intergenic 45.0%
! TGACTTGATTGGAGTGCTTC+AGG + chr4_2:68075025-68075044 None:intergenic 45.0%
!! TCAGTTTTGTCTTCACGCTG+TGG - chr4_2:68075046-68075065 Msa0617530:intron 45.0%
!! CATCTGTTGCTTTCCATCTG+CGG + chr4_2:68075960-68075979 None:intergenic 45.0%
GAGGTGGCCAACAAAACAAT+AGG + chr4_2:68076890-68076909 None:intergenic 45.0%
TTGGCCACCTCACGATTATA+AGG - chr4_2:68076899-68076918 Msa0617530:intron 45.0%
AATGCAGCGAACTAAGGGTA+TGG + chr4_2:68077159-68077178 None:intergenic 45.0%
!! TGAATTTGTTAAGACGGCCC+TGG + chr4_2:68077388-68077407 None:intergenic 45.0%
TTTGGGCCCCAAAAAATTGG+AGG - chr4_2:68077691-68077710 Msa0617530:intron 45.0%
AAGGACGAAGTAGCTTACTG+AGG - chr4_2:68077906-68077925 Msa0617530:intron 45.0%
AGGACGAAGTAGCTTACTGA+GGG - chr4_2:68077907-68077926 Msa0617530:intron 45.0%
AGGGTAGTAAAGAAGAAGGC+TGG - chr4_2:68077926-68077945 Msa0617530:intron 45.0%
GCTTCTCTGCTCATTCCAAA+TGG - chr4_2:68077987-68078006 Msa0617530:intron 45.0%
CTCTGCTCATTCCAAATGGT+TGG - chr4_2:68077991-68078010 Msa0617530:intron 45.0%
AGAGGAACGTACCACTAGAA+TGG + chr4_2:68078161-68078180 None:intergenic 45.0%
TCCAACTCCAACTGTGAAGA+GGG + chr4_2:68078956-68078975 None:intergenic 45.0%
TTCCAACTCCAACTGTGAAG+AGG + chr4_2:68078957-68078976 None:intergenic 45.0%
CTTCACAGTTGGAGTTGGAA+TGG - chr4_2:68078957-68078976 Msa0617530:CDS 45.0%
ACAACCACCAAACTGGAGTA+TGG - chr4_2:68079027-68079046 Msa0617530:CDS 45.0%
AGTTCCATACTCCAGTTTGG+TGG + chr4_2:68079034-68079053 None:intergenic 45.0%
!! TTCGGGTTGTATGATACACC+CGG - chr4_2:68079070-68079089 Msa0617530:CDS 45.0%
AAGTCATGCCAAATCTCCCA+TGG - chr4_2:68079402-68079421 Msa0617530:intron 45.0%
TCTCCCATGGTGGTTATAGA+TGG - chr4_2:68079415-68079434 Msa0617530:intron 45.0%
! GATTTTGCCAGCAATGTAGC+AGG - chr4_2:68079449-68079468 Msa0617530:intron 45.0%
AGCTTTACCTGCTACATTGC+TGG + chr4_2:68079459-68079478 None:intergenic 45.0%
! GTTGTCTTTTGCAGGCTTCA+AGG + chr4_2:68080664-68080683 None:intergenic 45.0%
ACTCTTGGTTGGAAGGACTT+TGG + chr4_2:68080745-68080764 None:intergenic 45.0%
CCTGGATTGATACTCTTGGT+TGG + chr4_2:68080756-68080775 None:intergenic 45.0%
!! CCAACCAAGAGTATCAATCC+AGG - chr4_2:68080753-68080772 Msa0617530:CDS 45.0%
CTCTTCTGTCAACCAATCAG+TGG - chr4_2:68080892-68080911 Msa0617530:CDS 45.0%
CGCATATGAATCCCACTGAT+TGG + chr4_2:68080907-68080926 None:intergenic 45.0%
! GAGTATGGTTTTCACCAGCT+GGG - chr4_2:68081116-68081135 Msa0617530:CDS 45.0%
!!! CATATTTTAAAAAAAAATTT+TGG - chr4_2:68077673-68077692 Msa0617530:intron 5.0%
!!! TTATTTTAAAAAAAATGAAA+AGG - chr4_2:68078665-68078684 Msa0617530:intron 5.0%
CAATATCTCCCTCTTCCCAG+TGG - chr4_2:68074171-68074190 Msa0617530:CDS 50.0%
TGTTTGATGCTCCAGCTTGG+TGG + chr4_2:68074254-68074273 None:intergenic 50.0%
ACCAGGTGTATCGAACAACC+TGG + chr4_2:68074294-68074313 None:intergenic 50.0%
AGGTTGTTCGATACACCTGG+TGG - chr4_2:68074293-68074312 Msa0617530:CDS 50.0%
CCAGAGACAGAAGAAAGCTC+TGG + chr4_2:68074431-68074450 None:intergenic 50.0%
CCAGAGCTTTCTTCTGTCTC+TGG - chr4_2:68074428-68074447 Msa0617530:CDS 50.0%
!!! CGTCGATTTTGCCAGCAATG+TGG - chr4_2:68074722-68074741 Msa0617530:CDS 50.0%
! GATTTTGCCAGCAATGTGGC+AGG - chr4_2:68074726-68074745 Msa0617530:intron 50.0%
AGCTTTACCTGCCACATTGC+TGG + chr4_2:68074736-68074755 None:intergenic 50.0%
TAGAGTTGTGGGATGAGGAC+TGG - chr4_2:68075567-68075586 Msa0617530:CDS 50.0%
AGTTACGGCTTGAACAGCAC+TGG + chr4_2:68076348-68076367 None:intergenic 50.0%
! CGAACTAAGGGTATGGCAAC+TGG + chr4_2:68077152-68077171 None:intergenic 50.0%
TTTGTTAAGACGGCCCTGGT+CGG + chr4_2:68077384-68077403 None:intergenic 50.0%
TTTAGCGTGCTTCAGTGGCT+AGG + chr4_2:68077600-68077619 None:intergenic 50.0%
!!! ACCGGGCCTCCAATTTTTTG+GGG + chr4_2:68077700-68077719 None:intergenic 50.0%
!!! CACCGGGCCTCCAATTTTTT+GGG + chr4_2:68077701-68077720 None:intergenic 50.0%
! GAATGAGCAGAGAAGCACAG+TGG + chr4_2:68077983-68078002 None:intergenic 50.0%
TGAAGGAAGAGTGGGAGTGA+GGG + chr4_2:68078133-68078152 None:intergenic 50.0%
TCCCTCTTCACAGTTGGAGT+TGG - chr4_2:68078952-68078971 Msa0617530:CDS 50.0%
TATGATACACCCGGTGGAAG+TGG - chr4_2:68079079-68079098 Msa0617530:intron 50.0%
! CAAGAGCACAACCTTCAACC+TGG + chr4_2:68079336-68079355 None:intergenic 50.0%
TCATGCCAAATCTCCCATGG+TGG - chr4_2:68079405-68079424 Msa0617530:intron 50.0%
AGCAGGACAGCAAAGAAGAG+TGG + chr4_2:68079983-68080002 None:intergenic 50.0%
! GCTGTTGTGCATGTTTTGCC+AGG + chr4_2:68080616-68080635 None:intergenic 50.0%
!! CATGGCTCTGATGAAGCAAG+AGG + chr4_2:68081011-68081030 None:intergenic 50.0%
CTCTTGCTTCATCAGAGCCA+TGG - chr4_2:68081009-68081028 Msa0617530:CDS 50.0%
! GGAGTATGGTTTTCACCAGC+TGG - chr4_2:68081115-68081134 Msa0617530:CDS 50.0%
GCCAGGTTGTTCGATACACC+TGG - chr4_2:68074290-68074309 Msa0617530:CDS 55.0%
CAAGGCCACAACCTTCAACC+TGG + chr4_2:68074613-68074632 None:intergenic 55.0%
!! ACGGCTTGAACAGCACTGGT+TGG + chr4_2:68076344-68076363 None:intergenic 55.0%
TTCGATCCATGTAGCCGACC+AGG - chr4_2:68077367-68077386 Msa0617530:intron 55.0%
TCGATCCATGTAGCCGACCA+GGG - chr4_2:68077368-68077387 Msa0617530:intron 55.0%
GCCCCAAAAAATTGGAGGCC+CGG - chr4_2:68077696-68077715 Msa0617530:intron 55.0%
!!! GCACCGGGCCTCCAATTTTT+TGG + chr4_2:68077702-68077721 None:intergenic 55.0%
TTGACCGTTGGTCGGCTACA+GGG + chr4_2:68077756-68077775 None:intergenic 55.0%
! AGAGAAGCACAGTGGACAGG+TGG + chr4_2:68077975-68077994 None:intergenic 55.0%
! AGCAGAGAAGCACAGTGGAC+AGG + chr4_2:68077978-68077997 None:intergenic 55.0%
GTGAAGGAAGAGTGGGAGTG+AGG + chr4_2:68078134-68078153 None:intergenic 55.0%
GGGTTGTATGATACACCCGG+TGG - chr4_2:68079073-68079092 Msa0617530:intron 55.0%
CCAGAAGAACCACTTCCACC+GGG + chr4_2:68079091-68079110 None:intergenic 55.0%
GCCAGAAGAACCACTTCCAC+CGG + chr4_2:68079092-68079111 None:intergenic 55.0%
TCCCTCTTCCCAGTGGGACT+GGG - chr4_2:68074178-68074197 Msa0617530:CDS 60.0%
TCCCAGTCCCACTGGGAAGA+GGG + chr4_2:68074182-68074201 None:intergenic 60.0%
! TTGGTGCTCCCAGTCCCACT+GGG + chr4_2:68074189-68074208 None:intergenic 60.0%
! ATTGGTGCTCCCAGTCCCAC+TGG + chr4_2:68074190-68074209 None:intergenic 60.0%
CTTGCAATTTCCGCGCTGCC+AGG - chr4_2:68074592-68074611 Msa0617530:CDS 60.0%
! TTTCCGCGCTGCCAGGTTGA+AGG - chr4_2:68074599-68074618 Msa0617530:CDS 60.0%
CAACCTTCAACCTGGCAGCG+CGG + chr4_2:68074605-68074624 None:intergenic 60.0%
! CGCTGCCAGGTTGAAGGTTG+TGG - chr4_2:68074605-68074624 Msa0617530:CDS 60.0%
! GCGGCCGTTCATGTTTTGCC+AGG + chr4_2:68076020-68076039 None:intergenic 60.0%
GTTGACCGTTGGTCGGCTAC+AGG + chr4_2:68077757-68077776 None:intergenic 60.0%
CCCGGTGGAAGTGGTTCTTC+TGG - chr4_2:68079088-68079107 Msa0617530:intron 60.0%
ACAATGTCCACCACGCTGCC+AGG - chr4_2:68079315-68079334 Msa0617530:CDS 60.0%
CAACCTTCAACCTGGCAGCG+TGG + chr4_2:68074605-68074624 None:intergenic 60.0%
CTCCCTCTTCCCAGTGGGAC+TGG - chr4_2:68074177-68074196 Msa0617530:CDS 65.0%
CTCCCAGTCCCACTGGGAAG+AGG + chr4_2:68074183-68074202 None:intergenic 65.0%
CCTTCAACCTGGCAGCGTGG+TGG + chr4_2:68079325-68079344 None:intergenic 65.0%
! CCACCACGCTGCCAGGTTGA+AGG - chr4_2:68079322-68079341 Msa0617530:intron 65.0%
GACGGCCCTGGTCGGCTACA+TGG + chr4_2:68077376-68077395 None:intergenic 70.0%
TCGGGGCTGGGCTATGGCAC+CGG + chr4_2:68077718-68077737 None:intergenic 70.0%
GTGCCATAGCCCAGCCCCGA+CGG - chr4_2:68077718-68077737 Msa0617530:intron 70.0%
TGCCATAGCCCAGCCCCGAC+GGG - chr4_2:68077719-68077738 Msa0617530:intron 70.0%
CCGTTGGTCGGCTACAGGGC+CGG + chr4_2:68077752-68077771 None:intergenic 70.0%
CCGGCCCTGTAGCCGACCAA+CGG - chr4_2:68077749-68077768 Msa0617530:intron 70.0%
CGGGGCTGGGCTATGGCACC+GGG + chr4_2:68077717-68077736 None:intergenic 75.0%
AGCCCGTCGGGGCTGGGCTA+TGG + chr4_2:68077724-68077743 None:intergenic 75.0%
!! AGCCCAGCCCCGACGGGCTA+TGG - chr4_2:68077725-68077744 Msa0617530:intron 75.0%
!! GCCCAGCCCCGACGGGCTAT+GGG - chr4_2:68077726-68077745 Msa0617530:intron 75.0%
GCCCATAGCCCGTCGGGGCT+GGG + chr4_2:68077730-68077749 None:intergenic 75.0%
!! AGCCCCGACGGGCTATGGGC+CGG - chr4_2:68077730-68077749 Msa0617530:intron 75.0%
AGGGCCGGCCCATAGCCCGT+CGG + chr4_2:68077737-68077756 None:intergenic 75.0%
! GGCCCATAGCCCGTCGGGGC+TGG + chr4_2:68077731-68077750 None:intergenic 80.0%
! GGCCGGCCCATAGCCCGTCG+GGG + chr4_2:68077735-68077754 None:intergenic 80.0%
! GGGCCGGCCCATAGCCCGTC+GGG + chr4_2:68077736-68077755 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 68074158 68081142 68074158 ID=Msa0617530;Name=Msa0617530
chr4_2 mRNA 68074158 68081142 68074158 ID=Msa0617530-mRNA-1;Parent=Msa0617530;Name=Msa0617530-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.28|0.12|1|1|1|8|0|741
chr4_2 exon 68080553 68081142 68080553 ID=Msa0617530-mRNA-1:exon:19549;Parent=Msa0617530-mRNA-1
chr4_2 exon 68080233 68080366 68080233 ID=Msa0617530-mRNA-1:exon:19548;Parent=Msa0617530-mRNA-1
chr4_2 exon 68079224 68079337 68079224 ID=Msa0617530-mRNA-1:exon:19547;Parent=Msa0617530-mRNA-1
chr4_2 exon 68078939 68079090 68078939 ID=Msa0617530-mRNA-1:exon:19546;Parent=Msa0617530-mRNA-1
chr4_2 exon 68075830 68076398 68075830 ID=Msa0617530-mRNA-1:exon:19545;Parent=Msa0617530-mRNA-1
chr4_2 exon 68075504 68075640 68075504 ID=Msa0617530-mRNA-1:exon:19544;Parent=Msa0617530-mRNA-1
chr4_2 exon 68074526 68074741 68074526 ID=Msa0617530-mRNA-1:exon:19543;Parent=Msa0617530-mRNA-1
chr4_2 exon 68074158 68074471 68074158 ID=Msa0617530-mRNA-1:exon:19542;Parent=Msa0617530-mRNA-1
chr4_2 CDS 68080553 68081142 68080553 ID=Msa0617530-mRNA-1:cds;Parent=Msa0617530-mRNA-1
chr4_2 CDS 68080233 68080366 68080233 ID=Msa0617530-mRNA-1:cds;Parent=Msa0617530-mRNA-1
chr4_2 CDS 68079224 68079337 68079224 ID=Msa0617530-mRNA-1:cds;Parent=Msa0617530-mRNA-1
chr4_2 CDS 68078939 68079090 68078939 ID=Msa0617530-mRNA-1:cds;Parent=Msa0617530-mRNA-1
chr4_2 CDS 68075830 68076398 68075830 ID=Msa0617530-mRNA-1:cds;Parent=Msa0617530-mRNA-1
chr4_2 CDS 68075504 68075640 68075504 ID=Msa0617530-mRNA-1:cds;Parent=Msa0617530-mRNA-1
chr4_2 CDS 68074526 68074741 68074526 ID=Msa0617530-mRNA-1:cds;Parent=Msa0617530-mRNA-1
chr4_2 CDS 68074158 68074471 68074158 ID=Msa0617530-mRNA-1:cds;Parent=Msa0617530-mRNA-1
Gene Sequence

>Msa0617530

ATGGACTTGAATGCAATATCTCCCTCTTCCCAGTGGGACTGGGAGCACCAATCATTCTTCCACACAAAAGCAACTGAAAATCCAAAATTACAACCACCAAGCTGGAGCATCAAACAAGACCGAGAAATCAATGCCAGGTTGTTCGATACACCTGGTGGAAGTGATATTTTTGGCTCTGCATCAAGGAGTTCAAAATCAGCTTCAAATAGTTCATCGTCAAATAGGGATAATAGCAAAACATGTATTTTTGCTTGTGGAAATTCTCATACACCAGAGCTTTCTTCTGTCTCTGGTGAACCATTGCTCACTCTACTCGGAAAACGAGTGTACATTGAGGATGTATGTCCGAAAAGTAATTCCAAAAACCTATCTTTTTCAAGGGATCTTGCGTCATCTTTAAGTATTGGAAAGAAATGTAAGTTCAATAGTCAGAACTTGCAATTTCCGCGCTGCCAGGTTGAAGGTTGTGGCCTTGACCTTTCATCAGCGAAAGATTATCATCGCAAACGAAGAGTTTGTGAAAGTCATTCCAAATCTCCTATGGTGGTTATAGATGGTATGGAACGTCGATTTTGCCAGCAATGTGGCAGGTTCCACGATCTGTTTGAGTTCGATGAAAAGAAAAGAAGCTGCAGAGAACAACTTTCACGTCACAATGCAAGGCGACGTAAGCATCAGCCTGAAGCACTCCAATCAAGTCAATCAGTTTTGTCTTCACGCTGTGATGGAAAGCAACAGATGAGTCCATTTGCTAATTCAGAGACTGCTACAAATTTAGCCTGGCAAAACATGAACGGCCGCAAGCTCTTCCAAACAAAAGACAACACTAACACACAAGGTGTAGAAGATTTCATTACCGTTTCTGATACAAATGATAAACAAGACTTTACTTGTGCTCTCTCTCTTCTGTCAACTAATCCATGGGATTCATATGCGACTAAATCCATGTCTCTAGAACATTCTAATCGTCCAACCAGTGCTGTTCAAGCCATTAGATTACCTAATTTCTATGCTTTTCTGATGGACTTGAATGCAATATCTCCCTCTTCACAGTTGGAGTTGGAATGGGATCACCTACCATTACTTAATACAAAAGCAACTGAAAACCCAAAATTACAACCACCAAACTGGAGTATGGAACTTGACCGAGAAATCAATTTCGGGTTGTATGATACACCCGGTGGAAGTGGTTCTTCTGGCTCTGAGTTAATTCATGGTTCAGCATTTAATCCACCAAACCTTTCTTGTGTATCTGGTGAACCATTGCTCAATCTAAGACTTGGTAAAAGGATGTATTTTGAGGAAGTTTGTCCAGAAAGTGATTCCAAAAATCTTTCTTTTTCAAGGGATCTCATGTCATCTTCAATTCTTGAAAAGAAATGCAAGTCCAATGGTCAGAACTTACAATGTCCACCACGCTGCCAGGTTGAAGGTTGTGCTCTTGATCTTTCATCCGCAAAAGATTATCATCGCAAACGAAGAGTTTGTGAAAGTCATGCCAAATCTCCCATGGTGGTTATAGATGGTTTGGAGCGTCGATTTTGCCAGCAATGTAGCAGGTTCCATGATCTGTTTGAGTTTGATGGAAAGAAGAAAAGCTGCAGACGACAACTTTCAAATCACAATGCAAGGCGCCGTATATATCATCGTCAAGCTGTCCAATCAAGCCAATCAGCTTTATCTTATTCACGCAGTGATGAGAAGCAACAGATGAGTCCATTTTCTAATTCCAAGACTGCTACAAATTTAGCCTGGCAAAACATGCACAACAGCAAGCTCCCCCAAGCAAAAGATTTTCCCTTGAAGCCTGCAAAAGACAACATTGACACACCAAGTACTGTCAATATGCTTTCTCATGATTCCAATTTCCATTTTACATCCAAAGTCCTTCCAACCAAGAGTATCAATCCAGGTGTAGAAGATTTCATGAACTTTTCTGATACAAATGCTACACAAGACTTTACTTGTGCTCTCTCTCTTCTGTCAACCAATCAGTGGGATTCATATGCGACTAAATCCATTTCTGAAGAACATTCTAATCGCTCGACCAGTGCTTTTCAAGCCATAACTCATGCAATGAATCAGCGCATTCCTCTTGCTTCATCAGAGCCATGGTGTAGTGATCATGATCAATATGTCAATTCCAACATGTGGATCTCAAACTCTGCAGATAGCAATCACTTTCAGAAATTTCAACTGGAGTATGGTTTTCACCAGCTGGGTTAA
Protein sequence

>Msa0617530

MDLNAISPSSQWDWEHQSFFHTKATENPKLQPPSWSIKQDREINARLFDTPGGSDIFGSASRSSKSASNSSSSNRDNSKTCIFACGNSHTPELSSVSGEPLLTLLGKRVYIEDVCPKSNSKNLSFSRDLASSLSIGKKCKFNSQNLQFPRCQVEGCGLDLSSAKDYHRKRRVCESHSKSPMVVIDGMERRFCQQCGRFHDLFEFDEKKRSCREQLSRHNARRRKHQPEALQSSQSVLSSRCDGKQQMSPFANSETATNLAWQNMNGRKLFQTKDNTNTQGVEDFITVSDTNDKQDFTCALSLLSTNPWDSYATKSMSLEHSNRPTSAVQAIRLPNFYAFLMDLNAISPSSQLELEWDHLPLLNTKATENPKLQPPNWSMELDREINFGLYDTPGGSGSSGSELIHGSAFNPPNLSCVSGEPLLNLRLGKRMYFEEVCPESDSKNLSFSRDLMSSSILEKKCKSNGQNLQCPPRCQVEGCALDLSSAKDYHRKRRVCESHAKSPMVVIDGLERRFCQQCSRFHDLFEFDGKKKSCRRQLSNHNARRRIYHRQAVQSSQSALSYSRSDEKQQMSPFSNSKTATNLAWQNMHNSKLPQAKDFPLKPAKDNIDTPSTVNMLSHDSNFHFTSKVLPTKSINPGVEDFMNFSDTNATQDFTCALSLLSTNQWDSYATKSISEEHSNRSTSAFQAITHAMNQRIPLASSEPWCSDHDQYVNSNMWISNSADSNHFQKFQLEYGFHQLG*