AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0618850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0618850 MtrunA17_Chr8g0383661 97.884 567 7 2 1 563 1 566 0.0 1120
Msa0618850 MtrunA17_Chr3g0129451 78.824 425 55 5 172 562 189 612 0.0 684
Msa0618850 MtrunA17_Chr1g0211191 63.918 388 121 8 191 562 63 447 7.42e-160 463
Msa0618850 MtrunA17_Chr7g0259641 26.633 199 117 8 188 372 574 757 1.28e-12 70.9
Msa0618850 MtrunA17_Chr4g0058151 25.510 196 110 6 192 373 117 290 1.16e-11 65.9
Msa0618850 MtrunA17_Chr7g0260761 28.497 193 112 7 192 372 578 756 1.64e-11 67.4
Msa0618850 MtrunA17_Chr7g0267571 28.177 181 118 5 200 373 111 286 2.22e-11 65.5
Msa0618850 MtrunA17_Chr5g0415241 29.843 191 117 6 189 372 36 216 6.47e-11 63.2
Msa0618850 MtrunA17_Chr3g0121631 38.462 78 47 1 300 377 37 113 8.09e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0618850 AT5G09880.1 62.653 573 154 15 1 560 1 526 0.0 597
Msa0618850 AT2G16940.1 51.864 590 218 14 1 559 1 555 7.48e-165 481
Msa0618850 AT2G16940.2 49.604 631 219 18 1 559 1 604 1.24e-164 482
Msa0618850 AT2G16940.3 50.161 622 218 19 1 559 1 593 3.15e-163 478
Msa0618850 AT2G16940.5 62.312 398 131 8 178 559 20 414 7.84e-160 462
Msa0618850 AT2G16940.4 62.312 398 131 8 178 559 20 414 7.84e-160 462
Msa0618850 AT1G48920.1 29.240 171 112 3 198 361 297 465 1.49e-13 73.9
Msa0618850 AT3G14100.1 28.856 201 120 8 186 383 48 228 7.60e-12 68.2
Msa0618850 AT3G18610.2 28.571 182 118 4 171 347 297 471 1.21e-11 67.8
Msa0618850 AT3G18610.3 28.571 182 118 4 171 347 327 501 1.67e-11 67.4
Msa0618850 AT1G54080.1 27.830 212 122 9 186 395 52 234 1.87e-11 66.6
Msa0618850 AT2G37220.1 42.500 80 44 2 296 374 88 166 2.04e-11 65.5
Msa0618850 AT3G18610.1 28.571 182 118 4 171 347 357 531 2.67e-11 67.0
Msa0618850 AT4G16280.3 30.636 173 100 5 200 367 122 279 2.81e-11 66.6
Msa0618850 AT4G34110.1 28.743 167 102 4 199 363 37 188 2.89e-11 66.6
Msa0618850 AT4G16280.2 30.636 173 100 5 200 367 122 279 4.62e-11 66.2
Msa0618850 AT4G16280.4 30.636 173 100 5 200 367 47 204 4.62e-11 66.2
Msa0618850 AT3G54230.4 26.139 417 210 16 52 381 67 472 5.53e-11 66.2
Msa0618850 AT3G54230.5 26.139 417 210 16 52 381 111 516 6.97e-11 65.9
Msa0618850 AT3G54230.1 26.139 417 210 16 52 381 111 516 6.97e-11 65.9
Msa0618850 AT3G54230.2 26.077 418 210 16 52 381 111 517 8.07e-11 65.5

Find 184 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTCTTGAGTGGGCATTTA+AGG 0.130464 4_2:-69823474 None:intergenic
ACAGTTCTCTGATCCCTTTC+TGG 0.134704 4_2:-69819701 None:intergenic
TTTATATGAAGCCAAATTTA+AGG 0.136565 4_2:+69824474 Msa0618850:CDS
TCAAGATTCGTCCTTAAATT+TGG 0.179510 4_2:-69824485 None:intergenic
ACTTGACTTGCAGGAGATTC+AGG 0.222696 4_2:+69819645 Msa0618850:intron
AAGGCAGCTCAGAGTTTAAA+TGG 0.226346 4_2:+69822552 Msa0618850:CDS
ACGGGACACTGCAAGGGTTT+TGG 0.238665 4_2:+69822414 Msa0618850:CDS
TCAGAGGGTTTCACCATTAC+AGG 0.275311 4_2:-69821917 None:intergenic
TCAGAGTTTAAATGGGAAAT+TGG 0.278327 4_2:+69822560 Msa0618850:CDS
GGAGAGATAAGGAGAGGGAT+AGG 0.316456 4_2:+69818166 Msa0618850:CDS
CGTCGTCGGCGCCGTGCTTC+CGG 0.318437 4_2:-69817954 None:intergenic
TTGGATGAATCCTTGTCTTC+CGG 0.347395 4_2:-69817886 None:intergenic
CTCTCTGGCCAACTACTTCT+CGG 0.351599 4_2:+69821890 Msa0618850:CDS
TTTATGTCTATATCAAAATC+TGG 0.362952 4_2:-69823890 None:intergenic
AGAAGGACGGTGAGAGAGGT+GGG 0.379496 4_2:+69818145 Msa0618850:CDS
TCCCTTTCTGGGTCTGCCTC+AGG 0.382400 4_2:-69819689 None:intergenic
CAGTTCTCTGATCCCTTTCT+GGG 0.389571 4_2:-69819700 None:intergenic
AATGGGAAATTGGAGATTGC+TGG 0.395405 4_2:+69822570 Msa0618850:CDS
TAAGGAAAGGGAAAAGGAAC+GGG 0.403961 4_2:+69818218 Msa0618850:CDS
AGCATTGCTTATGCAAAGAT+TGG 0.405628 4_2:+69823493 Msa0618850:CDS
ATTCCTACTGGTTCTGCCAC+AGG 0.409863 4_2:-69823723 None:intergenic
CTCTCTCTCCGTCCCTCTCC+CGG 0.410021 4_2:-69818101 None:intergenic
AGAGAGAAAAGGAGAGGGAG+AGG 0.411678 4_2:+69818190 Msa0618850:CDS
AACGATCTTCCGGTCGTCAC+CGG 0.422240 4_2:+69818082 Msa0618850:CDS
CCAATGGCAATTGCGCTCTC+TGG 0.422721 4_2:+69821875 Msa0618850:CDS
GATTGCTGGCAGGACTATAA+AGG 0.425387 4_2:+69822584 Msa0618850:CDS
TTTCTGTCCACTGCTCCATA+TGG 0.427406 4_2:-69821995 None:intergenic
CGCTCTCCTCTGTCTCTCTC+AGG 0.430210 4_2:-69818324 None:intergenic
GTCCCTCTCCCGGTGACGAC+CGG 0.438349 4_2:-69818091 None:intergenic
GAGAAGGACGGTGAGAGAGG+TGG 0.438535 4_2:+69818144 Msa0618850:CDS
GAGAGATAAGGAGAGGGATA+GGG 0.440004 4_2:+69818167 Msa0618850:CDS
GTTGATCACAGCTATCTTCA+TGG 0.448889 4_2:+69824187 Msa0618850:CDS
TACAGATCATGTTGGAAGTC+AGG 0.450670 4_2:+69822710 Msa0618850:CDS
AGGGAGAAGGACGGTGAGAG+AGG 0.451992 4_2:+69818141 Msa0618850:CDS
GAGAGATAAGGAAAGGGAAA+AGG 0.451992 4_2:+69818212 Msa0618850:CDS
CTTCCGGTCGTCACCGGGAG+AGG 0.452549 4_2:+69818088 Msa0618850:CDS
CCAGAGAGCGCAATTGCCAT+TGG 0.454319 4_2:-69821875 None:intergenic
CTTCGACGAATACGAGTACT+TGG 0.454962 4_2:+69817843 Msa0618850:CDS
GAGGGATAGGGAGAGAGAAA+AGG 0.455945 4_2:+69818179 Msa0618850:CDS
GAGGTAGTAGAGAGAAAGAG+AGG 0.455975 4_2:+69818121 Msa0618850:CDS
GAAGACGGTGGAGGAGCAAC+CGG 0.456880 4_2:+69817867 Msa0618850:CDS
CTTGACTTGCAGGAGATTCA+GGG 0.457008 4_2:+69819646 Msa0618850:intron
ATCTCGACGGCGGCGAAGAT+AGG 0.458271 4_2:+69817977 Msa0618850:CDS
TTAAATCCGAGAGGACTTAC+CGG 0.460777 4_2:+69817935 Msa0618850:CDS
TCCTACTACAACAGCTCCAC+TGG 0.462492 4_2:-69821972 None:intergenic
CTTCAATAATAAACACTCGC+TGG 0.462607 4_2:-69823748 None:intergenic
TGAGAGAGGTGGGAGAGATA+AGG 0.463559 4_2:+69818155 Msa0618850:CDS
ACTTCTCGGGCAACCTGTAA+TGG 0.467311 4_2:+69821904 Msa0618850:CDS
ATTGGTGTGCCAACTGTGAA+TGG 0.468260 4_2:+69823609 Msa0618850:CDS
GAACACCGTGAACGATCTTC+CGG 0.471416 4_2:+69818072 Msa0618850:CDS
TCAAGACGATCTAAAGGAGT+TGG 0.473620 4_2:+69820248 Msa0618850:CDS
TCATCACAAACCTCGGTGCT+TGG 0.475999 4_2:-69823783 None:intergenic
TGAGCCATTTGGTCAGATTG+AGG 0.478316 4_2:+69822365 Msa0618850:CDS
TGGGTCGGTTCCTGTTCAGC+AGG 0.478642 4_2:+69823629 Msa0618850:CDS
GGAACGGGAGAGAAGAGATA+AGG 0.481950 4_2:+69818233 Msa0618850:CDS
ACTGGTTCTGCCACAGGGGT+AGG 0.482776 4_2:-69823717 None:intergenic
GGAGAGGAGAGATAAGGAAA+GGG 0.484965 4_2:+69818206 Msa0618850:CDS
GGAGAGGGAGAGGAGAGATA+AGG 0.487560 4_2:+69818200 Msa0618850:CDS
GGGAGAGGAGAGATAAGGAA+AGG 0.491755 4_2:+69818205 Msa0618850:CDS
AAGATCGTTCACGGTGTTCA+CGG 0.492254 4_2:-69818068 None:intergenic
TATGAGTTCTTCTCGAAAGC+TGG 0.501029 4_2:+69819887 Msa0618850:CDS
CTGCCTTTGCATGTTCAAGA+TGG 0.501167 4_2:-69822536 None:intergenic
GAGAGATGTCCGTCTGATCA+TGG 0.501655 4_2:+69820217 Msa0618850:CDS
ACAACCTCAATCTGACCAAA+TGG 0.502025 4_2:-69822369 None:intergenic
CCTCTTGAAAGATAATGCTC+TGG 0.505078 4_2:+69824530 Msa0618850:three_prime_UTR
TTGCTTATGCAAAGATTGGC+TGG 0.505604 4_2:+69823497 Msa0618850:CDS
CAGGTTGCCCGAGAAGTAGT+TGG 0.506510 4_2:-69821898 None:intergenic
CACTCGCTGGGAATTCCTAC+TGG 0.508916 4_2:-69823735 None:intergenic
GCTGTTGTAGTAGGACCATA+TGG 0.509161 4_2:+69821980 Msa0618850:CDS
GTGCTTCCGGTAAGTCCTCT+CGG 0.509691 4_2:-69817941 None:intergenic
CAAGACGATCTAAAGGAGTT+GGG 0.512572 4_2:+69820249 Msa0618850:CDS
AGACATAAAAGAGGATGTAG+AGG 0.512949 4_2:+69823904 Msa0618850:CDS
GAGGAAGAGTGTTCTAAATA+CGG 0.513774 4_2:+69823923 Msa0618850:CDS
TCCAGTGGAGCTGTTGTAGT+AGG 0.514605 4_2:+69821971 Msa0618850:CDS
TCTCTGGCCAACTACTTCTC+GGG 0.517772 4_2:+69821891 Msa0618850:CDS
CGACGAGAATGGCTCTAAGA+AGG 0.519514 4_2:+69818026 Msa0618850:CDS
CGGGAGAGGGACGGAGAGAG+AGG 0.522586 4_2:+69818102 Msa0618850:CDS
GAGAAAGAGAGGGAGAAGGA+CGG 0.524380 4_2:+69818132 Msa0618850:CDS
AGGTAGTAGAGAGAAAGAGA+GGG 0.525215 4_2:+69818122 Msa0618850:CDS
CTTCCTCTTGACATGGAGAC+GGG 0.525930 4_2:+69822396 Msa0618850:CDS
TTCAATAATAAACACTCGCT+GGG 0.527139 4_2:-69823747 None:intergenic
TAGAGAGAAAGAGAGGGAGA+AGG 0.527732 4_2:+69818128 Msa0618850:CDS
TAAGGAGAGAGAGAAGGAAC+GGG 0.528335 4_2:+69818251 Msa0618850:CDS
TGCCTTTGCATGTTCAAGAT+GGG 0.529504 4_2:-69822535 None:intergenic
CCAGAGCATTATCTTTCAAG+AGG 0.530679 4_2:-69824530 None:intergenic
AAGAGTGTTCTAAATACGGC+CGG 0.531925 4_2:+69823927 Msa0618850:CDS
TGATGATGATGAAGGAGGAT+TGG 0.532759 4_2:+69822758 Msa0618850:CDS
AAATATAATGAAATAGCAAA+AGG 0.533407 4_2:-69824668 None:intergenic
AGGTGGGAGAGATAAGGAGA+GGG 0.535361 4_2:+69818161 Msa0618850:CDS
AACCTGAGGCAGACCCAGAA+AGG 0.536328 4_2:+69819687 Msa0618850:CDS
ACGATCTTCCGGTCGTCACC+GGG 0.536510 4_2:+69818083 Msa0618850:CDS
TTCCTACTGGTTCTGCCACA+GGG 0.541031 4_2:-69823722 None:intergenic
ATAAGGAAAGGGAAAAGGAA+CGG 0.542067 4_2:+69818217 Msa0618850:CDS
AGGCAGCTCAGAGTTTAAAT+GGG 0.544244 4_2:+69822553 Msa0618850:CDS
AGGAACTCAAGACGATCTAA+AGG 0.546738 4_2:+69820242 Msa0618850:CDS
TAGGGAGAGAGAAAAGGAGA+GGG 0.547283 4_2:+69818185 Msa0618850:CDS
GGACGACTCATACTCCTCCT+TGG 0.547659 4_2:-69818303 None:intergenic
CTCTAAGAAGGATCGCGATA+GGG 0.547806 4_2:+69818038 Msa0618850:CDS
CGCGGCGGAGACGACGAGAA+TGG 0.548162 4_2:+69818015 Msa0618850:CDS
TGCCCATCTTGAACATGCAA+AGG 0.550622 4_2:+69822533 Msa0618850:CDS
GCTCTAAGAAGGATCGCGAT+AGG 0.550790 4_2:+69818037 Msa0618850:CDS
ATAACACCTGGATTGCCAAA+AGG 0.551187 4_2:-69823663 None:intergenic
AAGAGATAAGGAGAGAGAGA+AGG 0.551591 4_2:+69818245 Msa0618850:CDS
AATCTTGAAGAAGTGCATAC+AGG 0.553277 4_2:+69824500 Msa0618850:exon
GGAAATTGGAGATTGCTGGC+AGG 0.559200 4_2:+69822574 Msa0618850:CDS
ACCTGAGGCAGACCCAGAAA+GGG 0.563699 4_2:+69819688 Msa0618850:CDS
GACGACCGGAAGATCGTTCA+CGG 0.566071 4_2:-69818077 None:intergenic
AATCGTAACGTAGCTAGCAA+TGG 0.566471 4_2:+69817819 Msa0618850:exon
AAGAGGAGAAAGAGAGACCA+AGG 0.566622 4_2:+69818286 Msa0618850:CDS
TTCCGGTCGTCACCGGGAGA+GGG 0.567050 4_2:+69818089 Msa0618850:CDS
CATAAGCAATGCTCTTGAGT+GGG 0.567427 4_2:-69823483 None:intergenic
GGGGTAGGCATGACTTGTGT+TGG 0.567564 4_2:-69823702 None:intergenic
ATTATCTTTCAAGAGGCTTG+AGG 0.568505 4_2:-69824523 None:intergenic
AGTGGACAGAAAATTGTATG+TGG 0.570567 4_2:+69822006 Msa0618850:CDS
CAGGGATAAGAAAGAGAATG+TGG 0.571250 4_2:+69819664 Msa0618850:CDS
CATGGAGACGGGACACTGCA+AGG 0.573578 4_2:+69822407 Msa0618850:CDS
ATAAGGAGAGAGAGAAGGAA+CGG 0.573962 4_2:+69818250 Msa0618850:CDS
GGTCGTCACCGGGAGAGGGA+CGG 0.574256 4_2:+69818093 Msa0618850:CDS
GTGGACAGAAAATTGTATGT+GGG 0.575032 4_2:+69822007 Msa0618850:CDS
GCATAAGCAATGCTCTTGAG+TGG 0.577589 4_2:-69823484 None:intergenic
GAGGTGGGAGAGATAAGGAG+AGG 0.579380 4_2:+69818160 Msa0618850:CDS
AAATATCGTACAGACCTTGT+GGG 0.582490 4_2:-69823530 None:intergenic
ATAGGGAGAGAGAAAAGGAG+AGG 0.583160 4_2:+69818184 Msa0618850:CDS
GTTCTTCTCGAAAGCTGGCA+AGG 0.584609 4_2:+69819892 Msa0618850:CDS
AACGAGCAATGCACATGAGA+TGG 0.585575 4_2:+69824153 Msa0618850:CDS
GCCGCCGTCGAGATCGTCGT+CGG 0.592650 4_2:-69817968 None:intergenic
AATTTGGCTTCATATAAATG+TGG 0.592878 4_2:-69824469 None:intergenic
TTGGTGTGCCAACTGTGAAT+GGG 0.595348 4_2:+69823610 Msa0618850:CDS
TCGACGGCGGCGAAGATAGG+CGG 0.595350 4_2:+69817980 Msa0618850:CDS
TGATGCGATGTCAGTGCCAA+TGG 0.595501 4_2:+69821859 Msa0618850:CDS
CGAGATTTCGAAAACAGAGA+TGG 0.596277 4_2:+69818345 Msa0618850:CDS
TGTGTACACAGAAGAAGTGC+AGG 0.600350 4_2:+69824083 Msa0618850:intron
GGAGGAGCAACCGGAAGACA+AGG 0.602697 4_2:+69817876 Msa0618850:CDS
TATAAATTGTAATGCCCAGA+CGG 0.605154 4_2:+69824591 Msa0618850:three_prime_UTR
ATTTCGAAAACAGAGATGGC+AGG 0.605883 4_2:+69818349 Msa0618850:CDS
ACTTCCTCTTGACATGGAGA+CGG 0.607732 4_2:+69822395 Msa0618850:CDS
TCATCTGTTACAGATCATGT+TGG 0.607952 4_2:+69822702 Msa0618850:CDS
GAAAGAGAATGTGGAACCTG+AGG 0.611571 4_2:+69819673 Msa0618850:CDS
TGTACAACTTCCTCTTGACA+TGG 0.615489 4_2:+69822389 Msa0618850:CDS
GCGAAGATAGGCGGAGCAAG+AGG 0.616111 4_2:+69817989 Msa0618850:CDS
GAGAGGACTTACCGGAAGCA+CGG 0.616261 4_2:+69817943 Msa0618850:CDS
GTTCAATCTAATGCTTCCAG+TGG 0.619478 4_2:+69821956 Msa0618850:CDS
ATGGAGACGGGACACTGCAA+GGG 0.619950 4_2:+69822408 Msa0618850:CDS
GTACTTGGAGAAGACGGTGG+AGG 0.620385 4_2:+69817858 Msa0618850:CDS
ACTGACGCGGGTATAACACC+TGG 0.622167 4_2:-69823675 None:intergenic
CGACATAAATATGCAACACC+CGG 0.623634 4_2:-69823946 None:intergenic
ATGTCCGTCTGATCATGGAT+AGG 0.625620 4_2:+69820222 Msa0618850:CDS
GCAGACTTTGATGATGATGA+AGG 0.629623 4_2:+69822750 Msa0618850:CDS
GTTACGTTACGAAAACAAGA+GGG 0.632276 4_2:-69817700 None:intergenic
AGTCGTCCTGAGAGAGACAG+AGG 0.632776 4_2:+69818318 Msa0618850:CDS
ACATGAGATGGTTTGCACGC+AGG 0.634613 4_2:+69824165 Msa0618850:CDS
GGAACCGACCCATTCACAGT+TGG 0.635458 4_2:-69823618 None:intergenic
AGTTCCTATCCATGATCAGA+CGG 0.636518 4_2:-69820226 None:intergenic
TGGACAGAAAATTGTATGTG+GGG 0.636625 4_2:+69822008 Msa0618850:CDS
TACGTTACGAAAACAAGAGG+GGG 0.637320 4_2:-69817698 None:intergenic
AGAGTGTTCTAAATACGGCC+GGG 0.637402 4_2:+69823928 Msa0618850:CDS
AGTTACGTTACGAAAACAAG+AGG 0.648390 4_2:-69817701 None:intergenic
TGTCCCGTCTCCATGTCAAG+AGG 0.648903 4_2:-69822399 None:intergenic
AGGCAACCAACCAACCTGGT+AGG 0.658360 4_2:-69819729 None:intergenic
AGGCGGAGCAAGAGGTCACG+CGG 0.658613 4_2:+69817997 Msa0618850:CDS
AGTCCTCTCGGATTTAATGT+CGG 0.659142 4_2:-69817929 None:intergenic
GACTTTGATGATGATGAAGG+AGG 0.661760 4_2:+69822753 Msa0618850:CDS
GTACTTGCAGTTTGAAACAG+TGG 0.665993 4_2:+69824112 Msa0618850:CDS
ATACGAGTACTTGGAGAAGA+CGG 0.666924 4_2:+69817852 Msa0618850:CDS
GGCGCCGACGACGATCTCGA+CGG 0.667091 4_2:+69817964 Msa0618850:CDS
GCCGACGACGATCTCGACGG+CGG 0.668056 4_2:+69817967 Msa0618850:CDS
AGTAGGACCATATGGAGCAG+TGG 0.670759 4_2:+69821988 Msa0618850:CDS
CTGGTACTGACATTCCCACA+AGG 0.673381 4_2:+69823516 Msa0618850:CDS
ACCCCTGTGGCAGAACCAGT+AGG 0.679311 4_2:+69823720 Msa0618850:CDS
TGTGCCAACTGTGAATGGGT+CGG 0.685971 4_2:+69823614 Msa0618850:CDS
TCCTACTGGTTCTGCCACAG+GGG 0.691418 4_2:-69823721 None:intergenic
TTACGTTACGAAAACAAGAG+GGG 0.697773 4_2:-69817699 None:intergenic
TCTTCACTTCAACATGACTG+AGG 0.697877 4_2:+69822033 Msa0618850:CDS
CGAGTACTTGGAGAAGACGG+TGG 0.704167 4_2:+69817855 Msa0618850:CDS
AGGAGAAAGAGAGACCAAGG+AGG 0.706516 4_2:+69818289 Msa0618850:CDS
ACAAGTCATGCCTACCCCTG+TGG 0.707457 4_2:+69823707 Msa0618850:CDS
GACTGAGGCTAATCTCCGAG+AGG 0.707679 4_2:+69822048 Msa0618850:CDS
AAATTGTAATGCCCAGACGG+TGG 0.709464 4_2:+69824594 Msa0618850:three_prime_UTR
TTGTGTTGGTAGAACTGACG+CGG 0.710439 4_2:-69823688 None:intergenic
TGTAATGGTGAAACCCTCTG+AGG 0.719486 4_2:+69821919 Msa0618850:CDS
CGGAGCAAGAGGTCACGCGG+CGG 0.728879 4_2:+69818000 Msa0618850:CDS
TATGTTTGATCCAAGCACCG+AGG 0.738501 4_2:+69823773 Msa0618850:CDS
TGTGTTGGTAGAACTGACGC+GGG 0.742830 4_2:-69823687 None:intergenic
TCACCGACATTAAATCCGAG+AGG 0.753568 4_2:+69817926 Msa0618850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAAAGTTTAATGTAT+TGG + chr4_2:69818484-69818503 Msa0618850:intron 10.0%
!!! TTTTTTTTTGTTTTTTTAAG+AGG - chr4_2:69821233-69821252 None:intergenic 10.0%
!! TACTTAAAATATTAGAAAAT+TGG + chr4_2:69822796-69822815 Msa0618850:intron 10.0%
!! TATATGATATTAGAACATTA+TGG + chr4_2:69818996-69819015 Msa0618850:intron 15.0%
!!! TTTTGTTCTTATAAAATAAG+AGG + chr4_2:69819204-69819223 Msa0618850:intron 15.0%
!!! TTTCATTAATTTGTTGTTAT+TGG + chr4_2:69819398-69819417 Msa0618850:intron 15.0%
!!! TTCATTAATTTGTTGTTATT+GGG + chr4_2:69819399-69819418 Msa0618850:intron 15.0%
!!! CTATTTAAAACAAACAAAAA+TGG - chr4_2:69819755-69819774 None:intergenic 15.0%
!! ATTATACTTTAAACAAAAGA+GGG - chr4_2:69820175-69820194 None:intergenic 15.0%
!! AATTATACTTTAAACAAAAG+AGG - chr4_2:69820176-69820195 None:intergenic 15.0%
!! AATAAATAAAAGGTTAAAAG+TGG - chr4_2:69821152-69821171 None:intergenic 15.0%
!! TATTATATGAATTAAGAGTA+AGG - chr4_2:69821326-69821345 None:intergenic 15.0%
!! TAAATATAAAATGACCTAAA+AGG - chr4_2:69821567-69821586 None:intergenic 15.0%
!! AATATATTTAGTCAAACTAT+AGG - chr4_2:69822231-69822250 None:intergenic 15.0%
!!! TAAAATTGTTTTCTTTAAAC+TGG + chr4_2:69822265-69822284 Msa0618850:intron 15.0%
!! TCAACAAAATTTAAACAAAA+AGG - chr4_2:69822628-69822647 None:intergenic 15.0%
!! CAAATTTACTAAAGTTTATA+CGG + chr4_2:69822870-69822889 Msa0618850:intron 15.0%
!!! AACATTTTATCAAACAAAAT+AGG - chr4_2:69823100-69823119 None:intergenic 15.0%
!!! AAACATTTATTTTGTTGTTT+CGG - chr4_2:69823153-69823172 None:intergenic 15.0%
!!! AACAACAAAATAAATGTTTT+TGG + chr4_2:69823154-69823173 Msa0618850:intron 15.0%
!!! TTGCAATTTTTTAATTAGTT+CGG + chr4_2:69824060-69824079 Msa0618850:intron 15.0%
!! ATTGTTGAATTTAATAAAGA+GGG - chr4_2:69824382-69824401 None:intergenic 15.0%
!! AAATATAATGAAATAGCAAA+AGG - chr4_2:69824671-69824690 None:intergenic 15.0%
!!! TTTAGGGTTTTAGATTTTAT+AGG - chr4_2:69817745-69817764 None:intergenic 20.0%
!! TATTAGTATTACGTAGTTAT+TGG + chr4_2:69818525-69818544 Msa0618850:intron 20.0%
!! ATTAGTATTACGTAGTTATT+GGG + chr4_2:69818526-69818545 Msa0618850:intron 20.0%
!! AAAAAAATTGCATATAACAC+TGG - chr4_2:69819185-69819204 None:intergenic 20.0%
!! AGGTATAAGTATATCATTAA+TGG + chr4_2:69819291-69819310 Msa0618850:intron 20.0%
!!! TTTAAAACAAACAAAAATGG+AGG - chr4_2:69819752-69819771 None:intergenic 20.0%
!! TTATACTTTAAACAAAAGAG+GGG - chr4_2:69820174-69820193 None:intergenic 20.0%
!! ATTGTATGCATGAAAAAAAT+GGG - chr4_2:69820499-69820518 None:intergenic 20.0%
!!! AGATTGAACAAGATTTTTTT+CGG - chr4_2:69821945-69821964 None:intergenic 20.0%
!!! AAAGGTAAAAATATTTTTGC+TGG + chr4_2:69822602-69822621 Msa0618850:intron 20.0%
!! AAATATTAGAAAATTGGTTG+TGG + chr4_2:69822802-69822821 Msa0618850:intron 20.0%
!! TTCTAGATATGAAATTATAC+AGG + chr4_2:69822979-69822998 Msa0618850:intron 20.0%
!! AGGTTACATGTAAATATATA+AGG + chr4_2:69823073-69823092 Msa0618850:intron 20.0%
!! GGTTACATGTAAATATATAA+GGG + chr4_2:69823074-69823093 Msa0618850:intron 20.0%
!! TTTATGTCTATATCAAAATC+TGG - chr4_2:69823893-69823912 None:intergenic 20.0%
!!! TTTTGATATAGACATAAAAG+AGG + chr4_2:69823895-69823914 Msa0618850:CDS 20.0%
!! GATTGTTGAATTTAATAAAG+AGG - chr4_2:69824383-69824402 None:intergenic 20.0%
!! TTTATATGAAGCCAAATTTA+AGG + chr4_2:69824474-69824493 Msa0618850:CDS 20.0%
!!! TGCTCTATTGATTTTTCAAT+TGG + chr4_2:69818419-69818438 Msa0618850:intron 25.0%
! ATTTCTAATTCAATCATGTC+TGG - chr4_2:69818634-69818653 None:intergenic 25.0%
! ATCTCTAGATCATTCTTAAT+CGG - chr4_2:69818953-69818972 None:intergenic 25.0%
!! TTTATGAAGTTTTTCTGTGT+TGG + chr4_2:69819126-69819145 Msa0618850:intron 25.0%
! ACCAAATAGCAACTAATTAA+TGG - chr4_2:69819260-69819279 None:intergenic 25.0%
! CATTGTATGCATGAAAAAAA+TGG - chr4_2:69820500-69820519 None:intergenic 25.0%
! TCATAAAAGAAGGAAAAGAT+GGG - chr4_2:69820581-69820600 None:intergenic 25.0%
! TTCATAAAAGAAGGAAAAGA+TGG - chr4_2:69820582-69820601 None:intergenic 25.0%
! GACTTACAATTCATAAAAGA+AGG - chr4_2:69820591-69820610 None:intergenic 25.0%
!! TAAAATTTTGCTAATGCACT+AGG - chr4_2:69820699-69820718 None:intergenic 25.0%
!! TAAACTTGCTTCACTATTTA+TGG - chr4_2:69821370-69821389 None:intergenic 25.0%
!! TTAAACAAACATGTCCTTTT+AGG + chr4_2:69821550-69821569 Msa0618850:intron 25.0%
!! ATTGTTTTCTTTAAACTGGT+AGG + chr4_2:69822269-69822288 Msa0618850:intron 25.0%
! TATCACAACAAGATTCTAAT+CGG - chr4_2:69822301-69822320 None:intergenic 25.0%
!!! TTTTAGATTTTTGAGCCATT+TGG + chr4_2:69822354-69822373 Msa0618850:intron 25.0%
! TATTTCTTAAGGTTAAAGGT+TGG - chr4_2:69822458-69822477 None:intergenic 25.0%
! GCAATATTTCTTAAGGTTAA+AGG - chr4_2:69822462-69822481 None:intergenic 25.0%
! GTGAAAAGCAATATTTCTTA+AGG - chr4_2:69822469-69822488 None:intergenic 25.0%
!!! TCACTTTAACTTGTATTCAT+TGG + chr4_2:69822504-69822523 Msa0618850:intron 25.0%
! TTGATTGCATATATTTGTAG+AGG - chr4_2:69823185-69823204 None:intergenic 25.0%
! TAACAATAGTACTCATCTAT+TGG + chr4_2:69823367-69823386 Msa0618850:intron 25.0%
! AACAATAGTACTCATCTATT+GGG + chr4_2:69823368-69823387 Msa0618850:intron 25.0%
!!! ACATTAGTTTTTCTTCTGTA+CGG + chr4_2:69823418-69823437 Msa0618850:intron 25.0%
! CAGGTTCATAAAAATATAAG+AGG - chr4_2:69823557-69823576 None:intergenic 25.0%
! AATATGTGAAAACAATGAAC+AGG - chr4_2:69823576-69823595 None:intergenic 25.0%
! AAATTGCAACACATAATATG+TGG - chr4_2:69824049-69824068 None:intergenic 25.0%
! TTGAATTTAATAAAGAGGGA+CGG - chr4_2:69824378-69824397 None:intergenic 25.0%
! AAGATATTGATCTAGAGAAA+AGG - chr4_2:69824425-69824444 None:intergenic 25.0%
!! AATTTGGCTTCATATAAATG+TGG - chr4_2:69824472-69824491 None:intergenic 25.0%
!!! ACCTTGTTTAACTTTTTGTT+TGG + chr4_2:69824706-69824725 Msa0618850:three_prime_UTR 25.0%
! TCCAAACAAAAAGTTAAACA+AGG - chr4_2:69824710-69824729 None:intergenic 25.0%
!!! TGTTTAACTTTTTGTTTGGA+AGG + chr4_2:69824710-69824729 Msa0618850:three_prime_UTR 25.0%
! GAACTGTGATGTGAATTTTA+GGG - chr4_2:69817761-69817780 None:intergenic 30.0%
! AGAACTGTGATGTGAATTTT+AGG - chr4_2:69817762-69817781 None:intergenic 30.0%
!! AGTTTTGTGAAGTGTTTTGA+TGG - chr4_2:69817790-69817809 None:intergenic 30.0%
AGAGCAAACATGAAATGAAA+AGG - chr4_2:69818405-69818424 None:intergenic 30.0%
AGAGTAAAATAAGAGATGCA+GGG + chr4_2:69818580-69818599 Msa0618850:intron 30.0%
ATGACAATATTAGAGAGAGT+TGG + chr4_2:69818652-69818671 Msa0618850:intron 30.0%
TGACAATATTAGAGAGAGTT+GGG + chr4_2:69818653-69818672 Msa0618850:intron 30.0%
AATGCCTATTGTAGAAAAGA+TGG + chr4_2:69818678-69818697 Msa0618850:intron 30.0%
! TCTACCATCTTTTCTACAAT+AGG - chr4_2:69818685-69818704 None:intergenic 30.0%
GTGAGTATGTTAATTGTTCT+GGG - chr4_2:69818851-69818870 None:intergenic 30.0%
TGTGAGTATGTTAATTGTTC+TGG - chr4_2:69818852-69818871 None:intergenic 30.0%
! ACAAAAAAGAGTATGTCTGA+TGG + chr4_2:69818886-69818905 Msa0618850:intron 30.0%
TGATCTAGAGATTAATGAGT+TGG + chr4_2:69818961-69818980 Msa0618850:intron 30.0%
! TAGAGATTAATGAGTTGGAT+AGG + chr4_2:69818966-69818985 Msa0618850:intron 30.0%
! AGAGATTAATGAGTTGGATA+GGG + chr4_2:69818967-69818986 Msa0618850:intron 30.0%
TTGAAATGTGATGCTAAACT+AGG + chr4_2:69819227-69819246 Msa0618850:intron 30.0%
! GCCATTAATTAGTTGCTATT+TGG + chr4_2:69819256-69819275 Msa0618850:intron 30.0%
! CTATTTGGTTCAATTCTTCA+AGG + chr4_2:69819271-69819290 Msa0618850:intron 30.0%
!! TAATCTGGGTTGATCTAAAA+AGG + chr4_2:69819367-69819386 Msa0618850:intron 30.0%
CATGTCATACTAGTTGAATT+TGG - chr4_2:69819589-69819608 None:intergenic 30.0%
CAAATTCAACTAGTATGACA+TGG + chr4_2:69819587-69819606 Msa0618850:intron 30.0%
! ATTTATACGGTCTGAGATAT+TGG + chr4_2:69819780-69819799 Msa0618850:intron 30.0%
ACTCTGCTTTCAGTTAAATA+GGG + chr4_2:69820000-69820019 Msa0618850:intron 30.0%
! ATTTGATGTTCCATGTTTTC+AGG + chr4_2:69820193-69820212 Msa0618850:intron 30.0%
TGCTTGACTGTATTCTTAAT+TGG + chr4_2:69820356-69820375 Msa0618850:intron 30.0%
! GTGAGCTAATTAAAGCATTA+GGG - chr4_2:69820424-69820443 None:intergenic 30.0%
! AGTGAGCTAATTAAAGCATT+AGG - chr4_2:69820425-69820444 None:intergenic 30.0%
TGCATGAAAAAAATGGGAAT+AGG - chr4_2:69820493-69820512 None:intergenic 30.0%
CATAAAAGAAGGAAAAGATG+GGG - chr4_2:69820580-69820599 None:intergenic 30.0%
AAGCTGAGTTTCATTATGTA+AGG - chr4_2:69820925-69820944 None:intergenic 30.0%
!!! AGCTTATAAGCTTGTTTTGA+TGG + chr4_2:69821025-69821044 Msa0618850:intron 30.0%
GCATTCAGCAATAGTATATA+TGG + chr4_2:69821270-69821289 Msa0618850:intron 30.0%
CACACATATATATACACACA+CGG - chr4_2:69822161-69822180 None:intergenic 30.0%
TCAGAGTTTAAATGGGAAAT+TGG + chr4_2:69822560-69822579 Msa0618850:CDS 30.0%
AGTGTTCATGTTTGATAGAT+AGG + chr4_2:69823013-69823032 Msa0618850:intron 30.0%
GATCTTGGAAAGAAAAACTA+AGG - chr4_2:69823286-69823305 None:intergenic 30.0%
AAAACAAAGCCAACAGAAAA+GGG - chr4_2:69823337-69823356 None:intergenic 30.0%
AAAAACAAAGCCAACAGAAA+AGG - chr4_2:69823338-69823357 None:intergenic 30.0%
ACAATAGTACTCATCTATTG+GGG + chr4_2:69823369-69823388 Msa0618850:intron 30.0%
TTCAATAATAAACACTCGCT+GGG - chr4_2:69823750-69823769 None:intergenic 30.0%
AATCAATTCATCACAAACCT+CGG - chr4_2:69823793-69823812 None:intergenic 30.0%
! TCTGAAACATCATATGGTTA+TGG - chr4_2:69823828-69823847 None:intergenic 30.0%
! TCGTTATCTGAAACATCATA+TGG - chr4_2:69823834-69823853 None:intergenic 30.0%
TGGAAACTGATAACATGAAA+AGG - chr4_2:69824029-69824048 None:intergenic 30.0%
AATATTCTTGAGTTCTCTGT+TGG + chr4_2:69824219-69824238 Msa0618850:intron 30.0%
GTAGTGTGATTAATCATACA+TGG - chr4_2:69824324-69824343 None:intergenic 30.0%
AACACATCAGAATGATAATC+TGG - chr4_2:69824353-69824372 None:intergenic 30.0%
TCAAGATTCGTCCTTAAATT+TGG - chr4_2:69824488-69824507 None:intergenic 30.0%
TATAAATTGTAATGCCCAGA+CGG + chr4_2:69824591-69824610 Msa0618850:three_prime_UTR 30.0%
!! CTTTTTGTTTGGAAGGTTTT+TGG + chr4_2:69824717-69824736 Msa0618850:three_prime_UTR 30.0%
TTACGTTACGAAAACAAGAG+GGG - chr4_2:69817702-69817721 None:intergenic 35.0%
GTTACGTTACGAAAACAAGA+GGG - chr4_2:69817703-69817722 None:intergenic 35.0%
AGTTACGTTACGAAAACAAG+AGG - chr4_2:69817704-69817723 None:intergenic 35.0%
!!! TCTTGTTTTCGTAACGTAAC+TGG + chr4_2:69817703-69817722 Msa0618850:five_prime_UTR 35.0%
!!! TTTGTGAAGTGTTTTGATGG+TGG - chr4_2:69817787-69817806 None:intergenic 35.0%
! GATGTCAGTGTTCTTCTTTT+TGG - chr4_2:69817908-69817927 None:intergenic 35.0%
ATAAGGAAAGGGAAAAGGAA+CGG + chr4_2:69818217-69818236 Msa0618850:CDS 35.0%
GTATTACGTAGTTATTGGGA+TGG + chr4_2:69818530-69818549 Msa0618850:intron 35.0%
GAGAGTAAAATAAGAGATGC+AGG + chr4_2:69818579-69818598 Msa0618850:intron 35.0%
! ATGAGAATTTTGTGGATGTG+TGG + chr4_2:69818603-69818622 Msa0618850:intron 35.0%
GACAATATTAGAGAGAGTTG+GGG + chr4_2:69818654-69818673 Msa0618850:intron 35.0%
ACAACAACCAATCCTAAGTA+GGG - chr4_2:69819045-69819064 None:intergenic 35.0%
AACAACAACCAATCCTAAGT+AGG - chr4_2:69819046-69819065 None:intergenic 35.0%
! AGTTTTTCTGTGTTGGAATG+TGG + chr4_2:69819133-69819152 Msa0618850:intron 35.0%
CACTGGCAACATAAACAATA+GGG - chr4_2:69819168-69819187 None:intergenic 35.0%
ACACTGGCAACATAAACAAT+AGG - chr4_2:69819169-69819188 None:intergenic 35.0%
! TATGATCCTTACTGCAGTTT+TGG + chr4_2:69819447-69819466 Msa0618850:intron 35.0%
GTCCATATTAGAGTCCAAAT+TGG - chr4_2:69819523-69819542 None:intergenic 35.0%
CTGCAAGTCAAGTTAAAATG+AGG - chr4_2:69819638-69819657 None:intergenic 35.0%
!!! CTCATTTTAACTTGACTTGC+AGG + chr4_2:69819636-69819655 Msa0618850:intron 35.0%
ATGATTTCCTGTTTGCTCTT+TGG + chr4_2:69819825-69819844 Msa0618850:intron 35.0%
!!! TCTCTCTCTGTTGCTTTTAA+CGG - chr4_2:69819863-69819882 None:intergenic 35.0%
CACTCTGCTTTCAGTTAAAT+AGG + chr4_2:69819999-69820018 Msa0618850:intron 35.0%
AAATGGGAATAGGACTGAAA+AGG - chr4_2:69820483-69820502 None:intergenic 35.0%
AGGTTTGATGCTCATGAATT+TGG + chr4_2:69820627-69820646 Msa0618850:intron 35.0%
ACTTTCATTTGACCAGTAGT+GGG + chr4_2:69820659-69820678 Msa0618850:intron 35.0%
ACCATTTAGACAAGAAGGAT+TGG - chr4_2:69820793-69820812 None:intergenic 35.0%
TTCGTATGAGTACAGAGATA+CGG - chr4_2:69820817-69820836 None:intergenic 35.0%
!! CTAGAGTTTTTGTTTCCCTA+CGG + chr4_2:69820957-69820976 Msa0618850:intron 35.0%
! AAAGCTAGCTTATAGCTTGT+TGG + chr4_2:69820999-69821018 Msa0618850:intron 35.0%
TTGATGGAATGTGATGTGTT+TGG + chr4_2:69821041-69821060 Msa0618850:intron 35.0%
TGAGCGGTTATATTAGAAAG+TGG - chr4_2:69821206-69821225 None:intergenic 35.0%
!!! TTTTTTAAGAGGAACGTGAG+CGG - chr4_2:69821222-69821241 None:intergenic 35.0%
GATAAAATTAGCTGCTGAAG+TGG - chr4_2:69821594-69821613 None:intergenic 35.0%
! AAAAGCTAGCTTATAGCTGA+TGG - chr4_2:69821672-69821691 None:intergenic 35.0%
GAATACAGCAAAGAGATGTA+GGG - chr4_2:69821754-69821773 None:intergenic 35.0%
AGAATACAGCAAAGAGATGT+AGG - chr4_2:69821755-69821774 None:intergenic 35.0%
AGTGGACAGAAAATTGTATG+TGG + chr4_2:69822006-69822025 Msa0618850:CDS 35.0%
GTGGACAGAAAATTGTATGT+GGG + chr4_2:69822007-69822026 Msa0618850:CDS 35.0%
TGGACAGAAAATTGTATGTG+GGG + chr4_2:69822008-69822027 Msa0618850:CDS 35.0%
ATACATTGATATCCTCACCA+CGG - chr4_2:69822129-69822148 None:intergenic 35.0%
TCATCTGTTACAGATCATGT+TGG + chr4_2:69822702-69822721 Msa0618850:CDS 35.0%
! TTGAAATTTCAGTGCTGTTG+AGG + chr4_2:69823040-69823059 Msa0618850:intron 35.0%
!! GGGAAGTTATTGTTTGTTGT+TGG + chr4_2:69823389-69823408 Msa0618850:intron 35.0%
AGCATTGCTTATGCAAAGAT+TGG + chr4_2:69823493-69823512 Msa0618850:CDS 35.0%
AAATATCGTACAGACCTTGT+GGG - chr4_2:69823533-69823552 None:intergenic 35.0%
AAAATATCGTACAGACCTTG+TGG - chr4_2:69823534-69823553 None:intergenic 35.0%
CTTCAATAATAAACACTCGC+TGG - chr4_2:69823751-69823770 None:intergenic 35.0%
AGACATAAAAGAGGATGTAG+AGG + chr4_2:69823904-69823923 Msa0618850:CDS 35.0%
!! GAGGAAGAGTGTTCTAAATA+CGG + chr4_2:69823923-69823942 Msa0618850:CDS 35.0%
! CAGAATGATAATCTGGTTCA+TGG - chr4_2:69824346-69824365 None:intergenic 35.0%
! AATCTTGAAGAAGTGCATAC+AGG + chr4_2:69824500-69824519 Msa0618850:exon 35.0%
ATTATCTTTCAAGAGGCTTG+AGG - chr4_2:69824526-69824545 None:intergenic 35.0%
TACGTTACGAAAACAAGAGG+GGG - chr4_2:69817701-69817720 None:intergenic 40.0%
AATCGTAACGTAGCTAGCAA+TGG + chr4_2:69817819-69817838 Msa0618850:exon 40.0%
ATACGAGTACTTGGAGAAGA+CGG + chr4_2:69817852-69817871 Msa0618850:CDS 40.0%
TTGGATGAATCCTTGTCTTC+CGG - chr4_2:69817889-69817908 None:intergenic 40.0%
AGTCCTCTCGGATTTAATGT+CGG - chr4_2:69817932-69817951 None:intergenic 40.0%
TTAAATCCGAGAGGACTTAC+CGG + chr4_2:69817935-69817954 Msa0618850:CDS 40.0%
AGGTAGTAGAGAGAAAGAGA+GGG + chr4_2:69818122-69818141 Msa0618850:CDS 40.0%
GAGAGATAAGGAAAGGGAAA+AGG + chr4_2:69818212-69818231 Msa0618850:CDS 40.0%
TAAGGAAAGGGAAAAGGAAC+GGG + chr4_2:69818218-69818237 Msa0618850:CDS 40.0%
AAGAGATAAGGAGAGAGAGA+AGG + chr4_2:69818245-69818264 Msa0618850:CDS 40.0%
ATAAGGAGAGAGAGAAGGAA+CGG + chr4_2:69818250-69818269 Msa0618850:CDS 40.0%
CGAGATTTCGAAAACAGAGA+TGG + chr4_2:69818345-69818364 Msa0618850:CDS 40.0%
ATTTCGAAAACAGAGATGGC+AGG + chr4_2:69818349-69818368 Msa0618850:CDS 40.0%
TAGTTATTGGGATGGAGTGT+TGG + chr4_2:69818538-69818557 Msa0618850:intron 40.0%
! ATGCAGGGATGAGAATTTTG+TGG + chr4_2:69818595-69818614 Msa0618850:intron 40.0%
AGATGGTAGAAACTCAGCTT+AGG + chr4_2:69818695-69818714 Msa0618850:intron 40.0%
AAGAAGAGTAGATCAGATGC+AGG + chr4_2:69818763-69818782 Msa0618850:intron 40.0%
AGAAGAGTAGATCAGATGCA+GGG + chr4_2:69818764-69818783 Msa0618850:intron 40.0%
CAGAGTTCGAATCTTGGTTA+GGG + chr4_2:69818814-69818833 Msa0618850:intron 40.0%
GAGAGTAGTCAAATCACTAG+AGG + chr4_2:69818908-69818927 Msa0618850:intron 40.0%
TAGTCAAATCACTAGAGGCA+AGG + chr4_2:69818913-69818932 Msa0618850:intron 40.0%
AGTCAAATCACTAGAGGCAA+GGG + chr4_2:69818914-69818933 Msa0618850:intron 40.0%
TAGATCAACCCAGATTATCC+TGG - chr4_2:69819364-69819383 None:intergenic 40.0%
ATTGGGTTTCAATGCTAGCA+CGG + chr4_2:69819416-69819435 Msa0618850:intron 40.0%
!!! TGCAGTTTTGGCTCATGTAT+AGG + chr4_2:69819459-69819478 Msa0618850:intron 40.0%
CGCCAATTTGGACTCTAATA+TGG + chr4_2:69819518-69819537 Msa0618850:intron 40.0%
CAGGGATAAGAAAGAGAATG+TGG + chr4_2:69819664-69819683 Msa0618850:CDS 40.0%
TATGAGTTCTTCTCGAAAGC+TGG + chr4_2:69819887-69819906 Msa0618850:CDS 40.0%
!! GGCTGCTACTTTATTGTGTA+TGG + chr4_2:69820021-69820040 Msa0618850:intron 40.0%
TTGCCACGTTCCTACAAATA+AGG + chr4_2:69820097-69820116 Msa0618850:intron 40.0%
TGCCACGTTCCTACAAATAA+GGG + chr4_2:69820098-69820117 Msa0618850:intron 40.0%
!! AGGGGAAGTATCATGTATAG+AGG - chr4_2:69820156-69820175 None:intergenic 40.0%
ACATCTCTCACCTGAAAACA+TGG - chr4_2:69820206-69820225 None:intergenic 40.0%
AGTTCCTATCCATGATCAGA+CGG - chr4_2:69820229-69820248 None:intergenic 40.0%
AGGAACTCAAGACGATCTAA+AGG + chr4_2:69820242-69820261 Msa0618850:CDS 40.0%
TCAAGACGATCTAAAGGAGT+TGG + chr4_2:69820248-69820267 Msa0618850:CDS 40.0%
CAAGACGATCTAAAGGAGTT+GGG + chr4_2:69820249-69820268 Msa0618850:CDS 40.0%
GAAGATCGATGACATAGTCT+TGG + chr4_2:69820454-69820473 Msa0618850:intron 40.0%
AAAAGAAGGAAAAGATGGGG+TGG - chr4_2:69820577-69820596 None:intergenic 40.0%
GAATTGTAAGTCTCTCACGT+TGG + chr4_2:69820599-69820618 Msa0618850:intron 40.0%
GACTTTCATTTGACCAGTAG+TGG + chr4_2:69820658-69820677 Msa0618850:intron 40.0%
! ACATTTTTGCAACGGATGCA+AGG + chr4_2:69820759-69820778 Msa0618850:intron 40.0%
GCCAATCCTTCTTGTCTAAA+TGG + chr4_2:69820789-69820808 Msa0618850:intron 40.0%
ACGGAACCATTTAGACAAGA+AGG - chr4_2:69820798-69820817 None:intergenic 40.0%
AAAGAGATGTAGGGTGTGTT+TGG - chr4_2:69821745-69821764 None:intergenic 40.0%
ATGCAAGTTCTTTATGCTGC+AGG + chr4_2:69821822-69821841 Msa0618850:intron 40.0%
!!! AGATTTTTTTCGGCCTCAGA+GGG - chr4_2:69821935-69821954 None:intergenic 40.0%
!!! AAGATTTTTTTCGGCCTCAG+AGG - chr4_2:69821936-69821955 None:intergenic 40.0%
GTTCAATCTAATGCTTCCAG+TGG + chr4_2:69821956-69821975 Msa0618850:CDS 40.0%
TCTTCACTTCAACATGACTG+AGG + chr4_2:69822033-69822052 Msa0618850:CDS 40.0%
AAACACGCACAAATACCTCT+CGG - chr4_2:69822066-69822085 None:intergenic 40.0%
ATGTGTGTGTGTGTTAACTG+AGG + chr4_2:69822174-69822193 Msa0618850:intron 40.0%
TGTGTGTGTGTGTTAACTGA+GGG + chr4_2:69822175-69822194 Msa0618850:intron 40.0%
ACAACCTCAATCTGACCAAA+TGG - chr4_2:69822372-69822391 None:intergenic 40.0%
TGTACAACTTCCTCTTGACA+TGG + chr4_2:69822389-69822408 Msa0618850:CDS 40.0%
TGCCTTTGCATGTTCAAGAT+GGG - chr4_2:69822538-69822557 None:intergenic 40.0%
AAGGCAGCTCAGAGTTTAAA+TGG + chr4_2:69822552-69822571 Msa0618850:CDS 40.0%
AGGCAGCTCAGAGTTTAAAT+GGG + chr4_2:69822553-69822572 Msa0618850:CDS 40.0%
AATGGGAAATTGGAGATTGC+TGG + chr4_2:69822570-69822589 Msa0618850:CDS 40.0%
GAACGTCGGTAACAAACAAA+TGG - chr4_2:69822668-69822687 None:intergenic 40.0%
AACCTGAATTTGACGAACGT+CGG - chr4_2:69822682-69822701 None:intergenic 40.0%
TACAGATCATGTTGGAAGTC+AGG + chr4_2:69822710-69822729 Msa0618850:CDS 40.0%
!! GCAGACTTTGATGATGATGA+AGG + chr4_2:69822750-69822769 Msa0618850:CDS 40.0%
!! GACTTTGATGATGATGAAGG+AGG + chr4_2:69822753-69822772 Msa0618850:CDS 40.0%
! TGATGATGATGAAGGAGGAT+TGG + chr4_2:69822758-69822777 Msa0618850:CDS 40.0%
TTGTTAGAAACCTGAACGAC+AGG + chr4_2:69822908-69822927 Msa0618850:intron 40.0%
TGTTAGAAACCTGAACGACA+GGG + chr4_2:69822909-69822928 Msa0618850:intron 40.0%
!!! TGTTTTTGAGACCAACCAAC+CGG + chr4_2:69823258-69823277 Msa0618850:intron 40.0%
GGAAAGAAAAACTAAGGACC+CGG - chr4_2:69823280-69823299 None:intergenic 40.0%
AGTGCGGTGATAAAAGATCT+TGG - chr4_2:69823301-69823320 None:intergenic 40.0%
CATAAGCAATGCTCTTGAGT+GGG - chr4_2:69823486-69823505 None:intergenic 40.0%
TTGCTTATGCAAAGATTGGC+TGG + chr4_2:69823497-69823516 Msa0618850:CDS 40.0%
ATATTTCCCAACTGCAGCAT+TGG + chr4_2:69823591-69823610 Msa0618850:intron 40.0%
ATGCTAAAAACCTGCTGAAC+AGG - chr4_2:69823642-69823661 None:intergenic 40.0%
!!! CAGGTTTTTAGCATGCCTTT+TGG + chr4_2:69823648-69823667 Msa0618850:CDS 40.0%
ATAACACCTGGATTGCCAAA+AGG - chr4_2:69823666-69823685 None:intergenic 40.0%
!! AAGAGTGTTCTAAATACGGC+CGG + chr4_2:69823927-69823946 Msa0618850:CDS 40.0%
CGACATAAATATGCAACACC+CGG - chr4_2:69823949-69823968 None:intergenic 40.0%
ACATGAAAAGGACACAGCAA+AGG - chr4_2:69824017-69824036 None:intergenic 40.0%
! GTACTTGCAGTTTGAAACAG+TGG + chr4_2:69824112-69824131 Msa0618850:CDS 40.0%
GTTGATCACAGCTATCTTCA+TGG + chr4_2:69824187-69824206 Msa0618850:CDS 40.0%
AGGTTTGCAGCATAACATCA+GGG - chr4_2:69824405-69824424 None:intergenic 40.0%
AAGGTTTGCAGCATAACATC+AGG - chr4_2:69824406-69824425 None:intergenic 40.0%
! CCAGAGCATTATCTTTCAAG+AGG - chr4_2:69824533-69824552 None:intergenic 40.0%
CCTCTTGAAAGATAATGCTC+TGG + chr4_2:69824530-69824549 Msa0618850:three_prime_UTR 40.0%
CTTCGACGAATACGAGTACT+TGG + chr4_2:69817843-69817862 Msa0618850:CDS 45.0%
TCACCGACATTAAATCCGAG+AGG + chr4_2:69817926-69817945 Msa0618850:CDS 45.0%
! CTCTAAGAAGGATCGCGATA+GGG + chr4_2:69818038-69818057 Msa0618850:CDS 45.0%
AAGATCGTTCACGGTGTTCA+CGG - chr4_2:69818071-69818090 None:intergenic 45.0%
GAGGTAGTAGAGAGAAAGAG+AGG + chr4_2:69818121-69818140 Msa0618850:CDS 45.0%
TAGAGAGAAAGAGAGGGAGA+AGG + chr4_2:69818128-69818147 Msa0618850:CDS 45.0%
GAGAGATAAGGAGAGGGATA+GGG + chr4_2:69818167-69818186 Msa0618850:CDS 45.0%
ATAGGGAGAGAGAAAAGGAG+AGG + chr4_2:69818184-69818203 Msa0618850:CDS 45.0%
TAGGGAGAGAGAAAAGGAGA+GGG + chr4_2:69818185-69818204 Msa0618850:CDS 45.0%
GGAGAGGAGAGATAAGGAAA+GGG + chr4_2:69818206-69818225 Msa0618850:CDS 45.0%
TAAGGAGAGAGAGAAGGAAC+GGG + chr4_2:69818251-69818270 Msa0618850:CDS 45.0%
AAGAGGAGAAAGAGAGACCA+AGG + chr4_2:69818286-69818305 Msa0618850:CDS 45.0%
!! TATTGGGATGGAGTGTTGGA+AGG + chr4_2:69818542-69818561 Msa0618850:intron 45.0%
TGGTAGAAACTCAGCTTAGG+TGG + chr4_2:69818698-69818717 Msa0618850:intron 45.0%
GAAACTCAGCTTAGGTGGTT+CGG + chr4_2:69818703-69818722 Msa0618850:intron 45.0%
CCTAACCAAGATTCGAACTC+TGG - chr4_2:69818816-69818835 None:intergenic 45.0%
CCAGAGTTCGAATCTTGGTT+AGG + chr4_2:69818813-69818832 Msa0618850:intron 45.0%
TAGCCAACCCTACTTAGGAT+TGG + chr4_2:69819035-69819054 Msa0618850:intron 45.0%
CAACCAATCCTAAGTAGGGT+TGG - chr4_2:69819041-69819060 None:intergenic 45.0%
ATTATCCTGGTATCCCTGGT+CGG - chr4_2:69819351-69819370 None:intergenic 45.0%
CAGGGATACCAGGATAATCT+GGG + chr4_2:69819353-69819372 Msa0618850:intron 45.0%
CATGAGCCAAAACTGCAGTA+AGG - chr4_2:69819456-69819475 None:intergenic 45.0%
!! ACTTGACTTGCAGGAGATTC+AGG + chr4_2:69819645-69819664 Msa0618850:intron 45.0%
!! CTTGACTTGCAGGAGATTCA+GGG + chr4_2:69819646-69819665 Msa0618850:intron 45.0%
GAAAGAGAATGTGGAACCTG+AGG + chr4_2:69819673-69819692 Msa0618850:CDS 45.0%
CAGTTCTCTGATCCCTTTCT+GGG - chr4_2:69819703-69819722 None:intergenic 45.0%
ACAGTTCTCTGATCCCTTTC+TGG - chr4_2:69819704-69819723 None:intergenic 45.0%
!!! GAGAACTGTTTTTGCCTACC+AGG + chr4_2:69819715-69819734 Msa0618850:CDS 45.0%
!!! ACTGTTTTTGCCTACCAGGT+TGG + chr4_2:69819719-69819738 Msa0618850:intron 45.0%
!!! TTTTTGCCTACCAGGTTGGT+TGG + chr4_2:69819723-69819742 Msa0618850:intron 45.0%
GTGAACACCAAAGAGCAAAC+AGG - chr4_2:69819835-69819854 None:intergenic 45.0%
GCCACGTTCCTACAAATAAG+GGG + chr4_2:69820099-69820118 Msa0618850:intron 45.0%
CCACGTTCCTACAAATAAGG+GGG + chr4_2:69820100-69820119 Msa0618850:intron 45.0%
GGCAGATGTAAGCATTCACT+GGG - chr4_2:69820135-69820154 None:intergenic 45.0%
AGGCAGATGTAAGCATTCAC+TGG - chr4_2:69820136-69820155 None:intergenic 45.0%
ATGTCCGTCTGATCATGGAT+AGG + chr4_2:69820222-69820241 Msa0618850:CDS 45.0%
TTAGCCATGCCATAGTGATG+AGG + chr4_2:69820380-69820399 Msa0618850:intron 45.0%
CATTCCTCATCACTATGGCA+TGG - chr4_2:69820387-69820406 None:intergenic 45.0%
CATGCCATAGTGATGAGGAA+TGG + chr4_2:69820385-69820404 Msa0618850:intron 45.0%
CTCACCATTCCTCATCACTA+TGG - chr4_2:69820392-69820411 None:intergenic 45.0%
TAATGCACTAGGCAGTAGGA+TGG - chr4_2:69820688-69820707 None:intergenic 45.0%
TTGCTAATGCACTAGGCAGT+AGG - chr4_2:69820692-69820711 None:intergenic 45.0%
! GCACGCACACATTTTTGCAA+CGG + chr4_2:69820751-69820770 Msa0618850:intron 45.0%
TGTTACCAAACACAGCCGTA+GGG - chr4_2:69820975-69820994 None:intergenic 45.0%
TATAGCTGATGGCTGATAGC+TGG - chr4_2:69821661-69821680 None:intergenic 45.0%
TCAGAGGGTTTCACCATTAC+AGG - chr4_2:69821920-69821939 None:intergenic 45.0%
TGTAATGGTGAAACCCTCTG+AGG + chr4_2:69821919-69821938 Msa0618850:CDS 45.0%
GCTGTTGTAGTAGGACCATA+TGG + chr4_2:69821980-69821999 Msa0618850:CDS 45.0%
TTTCTGTCCACTGCTCCATA+TGG - chr4_2:69821998-69822017 None:intergenic 45.0%
!! TGCTGTTTCATTATCTGCCG+TGG + chr4_2:69822109-69822128 Msa0618850:intron 45.0%
TTTCATTATCTGCCGTGGTG+AGG + chr4_2:69822114-69822133 Msa0618850:intron 45.0%
TGAGCCATTTGGTCAGATTG+AGG + chr4_2:69822365-69822384 Msa0618850:CDS 45.0%
ACTTCCTCTTGACATGGAGA+CGG + chr4_2:69822395-69822414 Msa0618850:CDS 45.0%
TGCCCATCTTGAACATGCAA+AGG + chr4_2:69822533-69822552 Msa0618850:CDS 45.0%
CTGCCTTTGCATGTTCAAGA+TGG - chr4_2:69822539-69822558 None:intergenic 45.0%
GATTGCTGGCAGGACTATAA+AGG + chr4_2:69822584-69822603 Msa0618850:CDS 45.0%
TACCGACGTTCGTCAAATTC+AGG + chr4_2:69822677-69822696 Msa0618850:intron 45.0%
GCTGTTGAGGATTTGCACTT+AGG + chr4_2:69823053-69823072 Msa0618850:intron 45.0%
!!! GTTTTTGAGACCAACCAACC+GGG + chr4_2:69823259-69823278 Msa0618850:intron 45.0%
AGAAAAACTAAGGACCCGGT+TGG - chr4_2:69823276-69823295 None:intergenic 45.0%
!! TCACCGCACTTTCACTTTTC+AGG + chr4_2:69823311-69823330 Msa0618850:intron 45.0%
!! CTTTTCAGGCCCTTTTCTGT+TGG + chr4_2:69823325-69823344 Msa0618850:intron 45.0%
TGCTCTTGAGTGGGCATTTA+AGG - chr4_2:69823477-69823496 None:intergenic 45.0%
GCATAAGCAATGCTCTTGAG+TGG - chr4_2:69823487-69823506 None:intergenic 45.0%
ATTGGTGTGCCAACTGTGAA+TGG + chr4_2:69823609-69823628 Msa0618850:CDS 45.0%
TTGGTGTGCCAACTGTGAAT+GGG + chr4_2:69823610-69823629 Msa0618850:CDS 45.0%
! TTGTGTTGGTAGAACTGACG+CGG - chr4_2:69823691-69823710 None:intergenic 45.0%
! TATGTTTGATCCAAGCACCG+AGG + chr4_2:69823773-69823792 Msa0618850:CDS 45.0%
! AGAGTGTTCTAAATACGGCC+GGG + chr4_2:69823928-69823947 Msa0618850:CDS 45.0%
! TGTGTACACAGAAGAAGTGC+AGG + chr4_2:69824083-69824102 Msa0618850:intron 45.0%
AACGAGCAATGCACATGAGA+TGG + chr4_2:69824153-69824172 Msa0618850:CDS 45.0%
AAATTGTAATGCCCAGACGG+TGG + chr4_2:69824594-69824613 Msa0618850:three_prime_UTR 45.0%
CTCAAAAATCACCACCGTCT+GGG - chr4_2:69824608-69824627 None:intergenic 45.0%
!! TTAAATAGTATAAATTTATA+CGG + chr4_2:69819767-69819786 Msa0618850:intron 5.0%
!! AACAAAATAAAATAAATAAA+AGG - chr4_2:69821162-69821181 None:intergenic 5.0%
!! CGACGAGAATGGCTCTAAGA+AGG + chr4_2:69818026-69818045 Msa0618850:CDS 50.0%
!! GCTCTAAGAAGGATCGCGAT+AGG + chr4_2:69818037-69818056 Msa0618850:CDS 50.0%
GAACACCGTGAACGATCTTC+CGG + chr4_2:69818072-69818091 Msa0618850:CDS 50.0%
GAGAAAGAGAGGGAGAAGGA+CGG + chr4_2:69818132-69818151 Msa0618850:CDS 50.0%
TGAGAGAGGTGGGAGAGATA+AGG + chr4_2:69818155-69818174 Msa0618850:CDS 50.0%
AGGTGGGAGAGATAAGGAGA+GGG + chr4_2:69818161-69818180 Msa0618850:CDS 50.0%
GGAGAGATAAGGAGAGGGAT+AGG + chr4_2:69818166-69818185 Msa0618850:CDS 50.0%
GAGGGATAGGGAGAGAGAAA+AGG + chr4_2:69818179-69818198 Msa0618850:CDS 50.0%
AGAGAGAAAAGGAGAGGGAG+AGG + chr4_2:69818190-69818209 Msa0618850:CDS 50.0%
GGGAGAGGAGAGATAAGGAA+AGG + chr4_2:69818205-69818224 Msa0618850:CDS 50.0%
GGAACGGGAGAGAAGAGATA+AGG + chr4_2:69818233-69818252 Msa0618850:CDS 50.0%
! ACGGGCTGAGAGAGAAAAAG+AGG + chr4_2:69818269-69818288 Msa0618850:CDS 50.0%
AGGAGAAAGAGAGACCAAGG+AGG + chr4_2:69818289-69818308 Msa0618850:CDS 50.0%
GCAGGGATGTGTAACTCACT+TGG + chr4_2:69818781-69818800 Msa0618850:intron 50.0%
GCTGTCCAGAGTTCGAATCT+TGG + chr4_2:69818808-69818827 Msa0618850:intron 50.0%
!! CCTAAGTAGGGTTGGCTACA+TGG - chr4_2:69819033-69819052 None:intergenic 50.0%
CCATGTAGCCAACCCTACTT+AGG + chr4_2:69819030-69819049 Msa0618850:intron 50.0%
ATGGATCTCAGTACCTCTCG+AGG + chr4_2:69819310-69819329 Msa0618850:intron 50.0%
TGGATCTCAGTACCTCTCGA+GGG + chr4_2:69819311-69819330 Msa0618850:intron 50.0%
TTATCCTGGTATCCCTGGTC+GGG - chr4_2:69819350-69819369 None:intergenic 50.0%
CCAGATTATCCTGGTATCCC+TGG - chr4_2:69819355-69819374 None:intergenic 50.0%
CCAGGGATACCAGGATAATC+TGG + chr4_2:69819352-69819371 Msa0618850:intron 50.0%
TCATTACTCCCTCCGAAGAC+TGG + chr4_2:69819494-69819513 Msa0618850:intron 50.0%
CATTACTCCCTCCGAAGACT+GGG + chr4_2:69819495-69819514 Msa0618850:intron 50.0%
GTTCTTCTCGAAAGCTGGCA+AGG + chr4_2:69819892-69819911 Msa0618850:CDS 50.0%
! CCCCCTTATTTGTAGGAACG+TGG - chr4_2:69820103-69820122 None:intergenic 50.0%
! CATGCAGCCCCCTTATTTGT+AGG - chr4_2:69820110-69820129 None:intergenic 50.0%
GAGAGATGTCCGTCTGATCA+TGG + chr4_2:69820217-69820236 Msa0618850:CDS 50.0%
! AGTCTCTCACGTTGGTGTCT+AGG + chr4_2:69820607-69820626 Msa0618850:intron 50.0%
GTAGGATGGTTACCCACTAC+TGG - chr4_2:69820674-69820693 None:intergenic 50.0%
GTGTGCGTGCGTGCAAATAA+AGG - chr4_2:69820741-69820760 None:intergenic 50.0%
TGTTTCCCTACGGCTGTGTT+TGG + chr4_2:69820967-69820986 Msa0618850:intron 50.0%
GTGTTACCAAACACAGCCGT+AGG - chr4_2:69820976-69820995 None:intergenic 50.0%
TGATGCGATGTCAGTGCCAA+TGG + chr4_2:69821859-69821878 Msa0618850:CDS 50.0%
CTCTCTGGCCAACTACTTCT+CGG + chr4_2:69821890-69821909 Msa0618850:CDS 50.0%
TCTCTGGCCAACTACTTCTC+GGG + chr4_2:69821891-69821910 Msa0618850:CDS 50.0%
ACTTCTCGGGCAACCTGTAA+TGG + chr4_2:69821904-69821923 Msa0618850:CDS 50.0%
TCCAGTGGAGCTGTTGTAGT+AGG + chr4_2:69821971-69821990 Msa0618850:CDS 50.0%
TCCTACTACAACAGCTCCAC+TGG - chr4_2:69821975-69821994 None:intergenic 50.0%
AGTAGGACCATATGGAGCAG+TGG + chr4_2:69821988-69822007 Msa0618850:CDS 50.0%
CTTCCTCTTGACATGGAGAC+GGG + chr4_2:69822396-69822415 Msa0618850:CDS 50.0%
GGAAATTGGAGATTGCTGGC+AGG + chr4_2:69822574-69822593 Msa0618850:CDS 50.0%
CATCAAACTCCCTGTCGTTC+AGG - chr4_2:69822921-69822940 None:intergenic 50.0%
AAACTAAGGACCCGGTTGGT+TGG - chr4_2:69823272-69823291 None:intergenic 50.0%
GGGCCTGAAAAGTGAAAGTG+CGG - chr4_2:69823317-69823336 None:intergenic 50.0%
!! CTGGTACTGACATTCCCACA+AGG + chr4_2:69823516-69823535 Msa0618850:CDS 50.0%
TGTGCCAACTGTGAATGGGT+CGG + chr4_2:69823614-69823633 Msa0618850:CDS 50.0%
! AGCATGCCTTTTGGCAATCC+AGG + chr4_2:69823657-69823676 Msa0618850:CDS 50.0%
! TGTGTTGGTAGAACTGACGC+GGG - chr4_2:69823690-69823709 None:intergenic 50.0%
!! TTCCTACTGGTTCTGCCACA+GGG - chr4_2:69823725-69823744 None:intergenic 50.0%
!! ATTCCTACTGGTTCTGCCAC+AGG - chr4_2:69823726-69823745 None:intergenic 50.0%
!! TCATCACAAACCTCGGTGCT+TGG - chr4_2:69823786-69823805 None:intergenic 50.0%
! ACATGAGATGGTTTGCACGC+AGG + chr4_2:69824165-69824184 Msa0618850:CDS 50.0%
CCTCAAAAATCACCACCGTC+TGG - chr4_2:69824609-69824628 None:intergenic 50.0%
! CCAGACGGTGGTGATTTTTG+AGG + chr4_2:69824606-69824625 Msa0618850:three_prime_UTR 50.0%
CGAGTACTTGGAGAAGACGG+TGG + chr4_2:69817855-69817874 Msa0618850:CDS 55.0%
GTACTTGGAGAAGACGGTGG+AGG + chr4_2:69817858-69817877 Msa0618850:CDS 55.0%
GTGCTTCCGGTAAGTCCTCT+CGG - chr4_2:69817944-69817963 None:intergenic 55.0%
GAGAGGACTTACCGGAAGCA+CGG + chr4_2:69817943-69817962 Msa0618850:CDS 55.0%
GACGACCGGAAGATCGTTCA+CGG - chr4_2:69818080-69818099 None:intergenic 55.0%
AACGATCTTCCGGTCGTCAC+CGG + chr4_2:69818082-69818101 Msa0618850:CDS 55.0%
AGAAGGACGGTGAGAGAGGT+GGG + chr4_2:69818145-69818164 Msa0618850:CDS 55.0%
GAGGTGGGAGAGATAAGGAG+AGG + chr4_2:69818160-69818179 Msa0618850:CDS 55.0%
GGAGAGGGAGAGGAGAGATA+AGG + chr4_2:69818200-69818219 Msa0618850:CDS 55.0%
GGACGACTCATACTCCTCCT+TGG - chr4_2:69818306-69818325 None:intergenic 55.0%
AGTCGTCCTGAGAGAGACAG+AGG + chr4_2:69818318-69818337 Msa0618850:CDS 55.0%
!! ACCTCTCGAGGGATTAGTCC+TGG + chr4_2:69819322-69819341 Msa0618850:intron 55.0%
CCAAATTGGCGCCCAGTCTT+CGG - chr4_2:69819509-69819528 None:intergenic 55.0%
AACCTGAGGCAGACCCAGAA+AGG + chr4_2:69819687-69819706 Msa0618850:CDS 55.0%
ACCTGAGGCAGACCCAGAAA+GGG + chr4_2:69819688-69819707 Msa0618850:CDS 55.0%
AGGCAACCAACCAACCTGGT+AGG - chr4_2:69819732-69819751 None:intergenic 55.0%
ATGGAGGCAACCAACCAACC+TGG - chr4_2:69819736-69819755 None:intergenic 55.0%
AAGATGGGGTGGTGTGTGTG+TGG - chr4_2:69820566-69820585 None:intergenic 55.0%
! CCAGAGAGCGCAATTGCCAT+TGG - chr4_2:69821878-69821897 None:intergenic 55.0%
CCAATGGCAATTGCGCTCTC+TGG + chr4_2:69821875-69821894 Msa0618850:CDS 55.0%
CAGGTTGCCCGAGAAGTAGT+TGG - chr4_2:69821901-69821920 None:intergenic 55.0%
GACTGAGGCTAATCTCCGAG+AGG + chr4_2:69822048-69822067 Msa0618850:CDS 55.0%
TGTCCCGTCTCCATGTCAAG+AGG - chr4_2:69822402-69822421 None:intergenic 55.0%
ATGGAGACGGGACACTGCAA+GGG + chr4_2:69822408-69822427 Msa0618850:CDS 55.0%
! ACGGGACACTGCAAGGGTTT+TGG + chr4_2:69822414-69822433 Msa0618850:CDS 55.0%
! CGGGACACTGCAAGGGTTTT+GGG + chr4_2:69822415-69822434 Msa0618850:CDS 55.0%
GGCACACCAATGCTGCAGTT+GGG - chr4_2:69823600-69823619 None:intergenic 55.0%
TGGCACACCAATGCTGCAGT+TGG - chr4_2:69823601-69823620 None:intergenic 55.0%
GGAACCGACCCATTCACAGT+TGG - chr4_2:69823621-69823640 None:intergenic 55.0%
ACTGACGCGGGTATAACACC+TGG - chr4_2:69823678-69823697 None:intergenic 55.0%
! GGGGTAGGCATGACTTGTGT+TGG - chr4_2:69823705-69823724 None:intergenic 55.0%
ACAAGTCATGCCTACCCCTG+TGG + chr4_2:69823707-69823726 Msa0618850:CDS 55.0%
!! TCCTACTGGTTCTGCCACAG+GGG - chr4_2:69823724-69823743 None:intergenic 55.0%
CACTCGCTGGGAATTCCTAC+TGG - chr4_2:69823738-69823757 None:intergenic 55.0%
GAAGACGGTGGAGGAGCAAC+CGG + chr4_2:69817867-69817886 Msa0618850:CDS 60.0%
GGAGGAGCAACCGGAAGACA+AGG + chr4_2:69817876-69817895 Msa0618850:CDS 60.0%
ATCTCGACGGCGGCGAAGAT+AGG + chr4_2:69817977-69817996 Msa0618850:CDS 60.0%
GCGAAGATAGGCGGAGCAAG+AGG + chr4_2:69817989-69818008 Msa0618850:CDS 60.0%
ACGATCTTCCGGTCGTCACC+GGG + chr4_2:69818083-69818102 Msa0618850:CDS 60.0%
AGGGAGAAGGACGGTGAGAG+AGG + chr4_2:69818141-69818160 Msa0618850:CDS 60.0%
GAGAAGGACGGTGAGAGAGG+TGG + chr4_2:69818144-69818163 Msa0618850:CDS 60.0%
CGCTCTCCTCTGTCTCTCTC+AGG - chr4_2:69818327-69818346 None:intergenic 60.0%
GCCAGGACTAATCCCTCGAG+AGG - chr4_2:69819326-69819345 None:intergenic 60.0%
ATTAGTCCTGGCTCCCGACC+AGG + chr4_2:69819334-69819353 Msa0618850:intron 60.0%
TTAGTCCTGGCTCCCGACCA+GGG + chr4_2:69819335-69819354 Msa0618850:intron 60.0%
ATTGGCGCCCAGTCTTCGGA+GGG - chr4_2:69819505-69819524 None:intergenic 60.0%
AATTGGCGCCCAGTCTTCGG+AGG - chr4_2:69819506-69819525 None:intergenic 60.0%
CCGAAGACTGGGCGCCAATT+TGG + chr4_2:69819506-69819525 Msa0618850:intron 60.0%
TCCCTTTCTGGGTCTGCCTC+AGG - chr4_2:69819692-69819711 None:intergenic 60.0%
TGGGGTGGTGTGTGTGTGGA+GGG - chr4_2:69820562-69820581 None:intergenic 60.0%
ATGGGGTGGTGTGTGTGTGG+AGG - chr4_2:69820563-69820582 None:intergenic 60.0%
CATGGAGACGGGACACTGCA+AGG + chr4_2:69822407-69822426 Msa0618850:CDS 60.0%
! TGGGTCGGTTCCTGTTCAGC+AGG + chr4_2:69823629-69823648 Msa0618850:CDS 60.0%
!! ACTGGTTCTGCCACAGGGGT+AGG - chr4_2:69823720-69823739 None:intergenic 60.0%
ACCCCTGTGGCAGAACCAGT+AGG + chr4_2:69823720-69823739 Msa0618850:CDS 60.0%
TCGACGGCGGCGAAGATAGG+CGG + chr4_2:69817980-69817999 Msa0618850:CDS 65.0%
AGGCGGAGCAAGAGGTCACG+CGG + chr4_2:69817997-69818016 Msa0618850:CDS 65.0%
TTCCGGTCGTCACCGGGAGA+GGG + chr4_2:69818089-69818108 Msa0618850:CDS 65.0%
CTCTCTCTCCGTCCCTCTCC+CGG - chr4_2:69818104-69818123 None:intergenic 65.0%
GTGGTGTGTGTGTGGAGGGG+AGG - chr4_2:69820558-69820577 None:intergenic 65.0%
GGGGTGGTGTGTGTGTGGAG+GGG - chr4_2:69820561-69820580 None:intergenic 65.0%
!! GGCGCCGACGACGATCTCGA+CGG + chr4_2:69817964-69817983 Msa0618850:CDS 70.0%
GCCGACGACGATCTCGACGG+CGG + chr4_2:69817967-69817986 Msa0618850:CDS 70.0%
GCCGCCGTCGAGATCGTCGT+CGG - chr4_2:69817971-69817990 None:intergenic 70.0%
CGGAGCAAGAGGTCACGCGG+CGG + chr4_2:69818000-69818019 Msa0618850:CDS 70.0%
CGCGGCGGAGACGACGAGAA+TGG + chr4_2:69818015-69818034 Msa0618850:CDS 70.0%
CTTCCGGTCGTCACCGGGAG+AGG + chr4_2:69818088-69818107 Msa0618850:CDS 70.0%
GTCCCTCTCCCGGTGACGAC+CGG - chr4_2:69818094-69818113 None:intergenic 70.0%
GGTCGTCACCGGGAGAGGGA+CGG + chr4_2:69818093-69818112 Msa0618850:CDS 70.0%
CGGGAGAGGGACGGAGAGAG+AGG + chr4_2:69818102-69818121 Msa0618850:CDS 70.0%
GGTATCCCTGGTCGGGAGCC+AGG - chr4_2:69819343-69819362 None:intergenic 70.0%
GGCTCCCGACCAGGGATACC+AGG + chr4_2:69819343-69819362 Msa0618850:intron 70.0%
CGTCGTCGGCGCCGTGCTTC+CGG - chr4_2:69817957-69817976 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 69817695 69824770 69817695 ID=Msa0618850;Name=Msa0618850
chr4_2 mRNA 69817695 69824770 69817695 ID=Msa0618850-mRNA-1;Parent=Msa0618850;Name=Msa0618850-mRNA-1;_AED=0.14;_eAED=0.14;_QI=143|1|1|1|1|1|13|263|563
chr4_2 exon 69817695 69818370 69817695 ID=Msa0618850-mRNA-1:exon:20227;Parent=Msa0618850-mRNA-1
chr4_2 exon 69819658 69819736 69819658 ID=Msa0618850-mRNA-1:exon:20228;Parent=Msa0618850-mRNA-1
chr4_2 exon 69819857 69819913 69819857 ID=Msa0618850-mRNA-1:exon:20229;Parent=Msa0618850-mRNA-1
chr4_2 exon 69820215 69820270 69820215 ID=Msa0618850-mRNA-1:exon:20230;Parent=Msa0618850-mRNA-1
chr4_2 exon 69821844 69822069 69821844 ID=Msa0618850-mRNA-1:exon:20231;Parent=Msa0618850-mRNA-1
chr4_2 exon 69822360 69822446 69822360 ID=Msa0618850-mRNA-1:exon:20232;Parent=Msa0618850-mRNA-1
chr4_2 exon 69822531 69822605 69822531 ID=Msa0618850-mRNA-1:exon:20233;Parent=Msa0618850-mRNA-1
chr4_2 exon 69822699 69822779 69822699 ID=Msa0618850-mRNA-1:exon:20234;Parent=Msa0618850-mRNA-1
chr4_2 exon 69823473 69823537 69823473 ID=Msa0618850-mRNA-1:exon:20235;Parent=Msa0618850-mRNA-1
chr4_2 exon 69823608 69823794 69823608 ID=Msa0618850-mRNA-1:exon:20236;Parent=Msa0618850-mRNA-1
chr4_2 exon 69823884 69823972 69823884 ID=Msa0618850-mRNA-1:exon:20237;Parent=Msa0618850-mRNA-1
chr4_2 exon 69824094 69824208 69824094 ID=Msa0618850-mRNA-1:exon:20238;Parent=Msa0618850-mRNA-1
chr4_2 exon 69824466 69824770 69824466 ID=Msa0618850-mRNA-1:exon:20239;Parent=Msa0618850-mRNA-1
chr4_2 five_prime_UTR 69817695 69817837 69817695 ID=Msa0618850-mRNA-1:five_prime_utr;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69817838 69818370 69817838 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69819658 69819736 69819658 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69819857 69819913 69819857 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69820215 69820270 69820215 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69821844 69822069 69821844 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69822360 69822446 69822360 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69822531 69822605 69822531 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69822699 69822779 69822699 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69823473 69823537 69823473 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69823608 69823794 69823608 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69823884 69823972 69823884 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69824094 69824208 69824094 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 CDS 69824466 69824507 69824466 ID=Msa0618850-mRNA-1:cds;Parent=Msa0618850-mRNA-1
chr4_2 three_prime_UTR 69824508 69824770 69824508 ID=Msa0618850-mRNA-1:three_prime_utr;Parent=Msa0618850-mRNA-1
Gene Sequence

>Msa0618850

ATGGACTTCGACGAATACGAGTACTTGGAGAAGACGGTGGAGGAGCAACCGGAAGACAAGGATTCATCCAAAAAGAAGAACACTGACATCACCGACATTAAATCCGAGAGGACTTACCGGAAGCACGGCGCCGACGACGATCTCGACGGCGGCGAAGATAGGCGGAGCAAGAGGTCACGCGGCGGAGACGACGAGAATGGCTCTAAGAAGGATCGCGATAGGGACAGAGACCGTGAACACCGTGAACGATCTTCCGGTCGTCACCGGGAGAGGGACGGAGAGAGAGGTAGTAGAGAGAAAGAGAGGGAGAAGGACGGTGAGAGAGGTGGGAGAGATAAGGAGAGGGATAGGGAGAGAGAAAAGGAGAGGGAGAGGAGAGATAAGGAAAGGGAAAAGGAACGGGAGAGAAGAGATAAGGAGAGAGAGAAGGAACGGGCTGAGAGAGAAAAAGAGGAGAAAGAGAGACCAAGGAGGAGTATGAGTCGTCCTGAGAGAGACAGAGGAGAGCGAGATTTCGAAAACAGAGATGGCAGGAGATTCAGGGATAAGAAAGAGAATGTGGAACCTGAGGCAGACCCAGAAAGGGATCAGAGAACTGTTTTTGCCTACCAGATGCCGTTAAAAGCAACAGAGAGAGATGTATATGAGTTCTTCTCGAAAGCTGGCAAGGTGAGAGATGTCCGTCTGATCATGGATAGGAACTCAAGACGATCTAAAGGAGTTGGGTATATTGAATTTTATGATGCGATGTCAGTGCCAATGGCAATTGCGCTCTCTGGCCAACTACTTCTCGGGCAACCTGTAATGGTGAAACCCTCTGAGGCCGAAAAAAATCTTGTTCAATCTAATGCTTCCAGTGGAGCTGTTGTAGTAGGACCATATGGAGCAGTGGACAGAAAATTGTATGTGGGGAATCTTCACTTCAACATGACTGAGGCTAATCTCCGAGAGATTTTTGAGCCATTTGGTCAGATTGAGGTTGTACAACTTCCTCTTGACATGGAGACGGGACACTGCAAGGGTTTTGGGTTTGTTCAATTTGCCCATCTTGAACATGCAAAGGCAGCTCAGAGTTTAAATGGGAAATTGGAGATTGCTGGCAGGACTATAAAGGTTTCATCTGTTACAGATCATGTTGGAAGTCAGGATACAACTACAAAGTCTGCAGACTTTGATGATGATGAAGGAGGATTGACCTTAAATGCCCACTCAAGAGCATTGCTTATGCAAAGATTGGCTGGTACTGACATTCCCACAAGCATTGGTGTGCCAACTGTGAATGGGTCGGTTCCTGTTCAGCAGGTTTTTAGCATGCCTTTTGGCAATCCAGGTGTTATACCCGCGTCAGTTCTACCAACACAAGTCATGCCTACCCCTGTGGCAGAACCAGTAGGAATTCCCAGCGAGTGTTTATTATTGAAGAATATGTTTGATCCAAGCACCGAGACAGAACCAGATTTTGATATAGACATAAAAGAGGATGTAGAGGAAGAGTGTTCTAAATACGGCCGGGTGTTGCATATTTATGTCGACAAAAGAAGTGCAGGTTTTGTGTACTTGCAGTTTGAAACAGTGGAAGCATCAAGTGCTGCACAACGAGCAATGCACATGAGATGGTTTGCACGCAGGTTGATCACAGCTATCTTCATGCAACCACATTTATATGAAGCCAAATTTAAGGACGAATCTTGA
Protein sequence

>Msa0618850

MDFDEYEYLEKTVEEQPEDKDSSKKKNTDITDIKSERTYRKHGADDDLDGGEDRRSKRSRGGDDENGSKKDRDRDRDREHRERSSGRHRERDGERGSREKEREKDGERGGRDKERDREREKERERRDKEREKERERRDKEREKERAEREKEEKERPRRSMSRPERDRGERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAVVVGPYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHVGSQDTTTKSADFDDDEGGLTLNAHSRALLMQRLAGTDIPTSIGVPTVNGSVPVQQVFSMPFGNPGVIPASVLPTQVMPTPVAEPVGIPSECLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYGRVLHIYVDKRSAGFVYLQFETVEASSAAQRAMHMRWFARRLITAIFMQPHLYEAKFKDES*