AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0622200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622200 MtrunA17_Chr7g0271971 98.832 428 5 0 1 428 1 428 0.0 865
Msa0622200 MtrunA17_Chr1g0192471 84.834 422 62 1 1 420 1 422 0.0 714
Msa0622200 MtrunA17_Chr1g0209451 70.755 424 122 2 1 422 1 424 0.0 612
Msa0622200 MtrunA17_Chr7g0225501 67.586 435 114 12 1 421 19 440 0.0 528
Msa0622200 MtrunA17_Chr1g0153671 59.314 408 164 2 14 420 11 417 1.13e-178 505
Msa0622200 MtrunA17_Chr3g0133801 57.720 421 169 3 8 422 4 421 3.18e-174 494
Msa0622200 MtrunA17_Chr2g0326251 67.290 214 53 8 109 315 7 210 1.87e-78 242
Msa0622200 MtrunA17_Chr1g0150451 33.730 252 141 10 57 302 97 328 1.49e-30 120
Msa0622200 MtrunA17_Chr3g0136711 33.333 246 136 10 57 295 54 278 3.03e-29 115
Msa0622200 MtrunA17_Chr3g0105351 30.033 303 172 14 5 297 42 314 3.18e-27 110
Msa0622200 MtrunA17_Chr3g0105371 30.032 313 176 14 6 297 48 338 4.99e-27 110
Msa0622200 MtrunA17_Chr1g0212961 32.155 283 159 14 25 304 90 342 5.73e-27 110
Msa0622200 MtrunA17_Chr5g0430481 31.429 245 143 10 60 297 148 374 2.88e-25 106
Msa0622200 MtrunA17_Chr8g0360351 33.191 235 133 10 66 295 64 279 1.22e-23 100
Msa0622200 MtrunA17_Chr2g0317021 31.128 257 148 11 46 297 100 332 1.29e-22 98.2
Msa0622200 MtrunA17_Chr4g0070871 29.740 269 142 9 62 297 249 503 7.92e-22 97.8
Msa0622200 MtrunA17_Chr3g0126511 30.196 255 149 10 46 295 108 338 3.38e-20 91.7
Msa0622200 MtrunA17_Chr2g0279151 28.936 235 143 8 66 295 63 278 1.39e-19 88.6
Msa0622200 MtrunA17_Chr4g0050381 30.472 233 138 9 68 295 61 274 1.98e-19 87.8
Msa0622200 MtrunA17_Chr1g0171571 31.301 246 136 7 69 299 419 646 3.45e-19 90.1
Msa0622200 MtrunA17_Chr3g0115851 30.043 233 139 8 68 295 66 279 6.69e-19 86.7
Msa0622200 MtrunA17_Chr4g0051661 32.068 237 132 10 66 295 181 395 1.57e-18 87.0
Msa0622200 MtrunA17_Chr5g0426141 30.901 233 137 8 68 295 66 279 2.79e-18 84.7
Msa0622200 MtrunA17_Chr5g0396731 32.020 203 117 7 65 259 104 293 3.12e-18 85.5
Msa0622200 MtrunA17_Chr8g0389921 30.412 194 120 6 69 258 199 381 4.75e-18 85.9
Msa0622200 MtrunA17_Chr1g0150781 29.889 271 134 10 69 299 291 545 8.72e-18 85.5
Msa0622200 MtrunA17_Chr1g0194191 30.112 269 148 12 67 312 117 368 1.07e-17 84.3
Msa0622200 MtrunA17_Chr6g0483411 29.474 285 152 12 40 295 52 316 1.41e-17 83.2
Msa0622200 MtrunA17_Chr2g0299981 26.220 328 169 10 32 297 219 535 1.45e-17 84.7
Msa0622200 MtrunA17_Chr3g0135961 29.740 269 133 9 69 297 287 539 1.98e-17 84.3
Msa0622200 MtrunA17_Chr4g0065141 30.830 253 128 11 65 295 121 348 1.02e-16 81.6
Msa0622200 MtrunA17_Chr5g0407161 28.455 246 134 10 67 295 123 343 1.54e-16 80.9
Msa0622200 MtrunA17_Chr3g0112291 30.047 213 117 6 66 261 121 318 1.88e-16 80.9
Msa0622200 MtrunA17_Chr2g0293811 30.677 251 138 11 64 295 96 329 2.66e-16 80.1
Msa0622200 MtrunA17_Chr7g0272061 36.875 160 81 8 131 276 182 335 6.02e-15 75.9
Msa0622200 MtrunA17_Chr2g0286951 29.010 293 162 13 43 302 67 346 1.30e-14 75.5
Msa0622200 MtrunA17_Chr6g0486661 27.859 341 180 18 4 297 60 381 1.53e-14 76.3
Msa0622200 MtrunA17_Chr7g0221691 30.303 264 145 12 41 283 143 388 6.80e-14 73.2
Msa0622200 MtrunA17_Chr4g0066371 32.203 295 144 18 41 297 64 340 1.26e-13 72.0
Msa0622200 MtrunA17_Chr5g0435721 28.641 206 121 7 69 261 224 416 1.27e-13 72.4
Msa0622200 MtrunA17_Chr1g0158781 30.242 248 140 8 69 297 146 379 3.85e-13 70.5
Msa0622200 MtrunA17_Chr3g0138281 29.688 256 131 11 61 295 116 343 5.85e-13 70.1
Msa0622200 MtrunA17_Chr1g0150071 25.869 259 121 10 54 257 38 280 1.05e-12 68.9
Msa0622200 MtrunA17_Chr4g0001761 32.624 141 68 5 128 257 156 280 1.92e-11 65.1
Msa0622200 MtrunA17_Chr3g0136811 31.206 141 70 5 128 257 156 280 2.61e-11 64.7
Msa0622200 MtrunA17_Chr7g0243571 24.607 382 223 18 21 352 50 416 4.16e-11 64.7
Msa0622200 MtrunA17_Chr5g0394181 26.172 256 147 9 66 297 360 597 4.70e-11 64.7
Msa0622200 MtrunA17_Chr8g0342431 30.818 159 93 7 136 283 201 353 5.24e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622200 AT1G09160.2 76.112 427 102 0 1 427 1 427 0.0 659
Msa0622200 AT1G09160.1 76.112 427 102 0 1 427 1 427 0.0 659
Msa0622200 AT1G68410.4 71.498 414 112 3 14 422 19 431 0.0 596
Msa0622200 AT1G68410.3 71.498 414 112 3 14 422 19 431 0.0 596
Msa0622200 AT1G68410.1 71.498 414 112 3 14 422 19 431 0.0 596
Msa0622200 AT1G68410.2 71.498 414 112 3 14 422 19 431 0.0 596
Msa0622200 AT1G47380.1 61.071 411 157 2 14 422 10 419 0.0 519
Msa0622200 AT2G34740.1 35.294 238 130 9 66 298 117 335 6.57e-29 116
Msa0622200 AT4G31750.1 31.365 271 144 10 57 306 53 302 1.10e-28 115
Msa0622200 AT4G31750.3 31.365 271 144 10 57 306 53 302 1.10e-28 115
Msa0622200 AT1G07160.1 32.130 277 153 12 33 297 123 376 1.59e-28 115
Msa0622200 AT4G31750.2 33.061 245 138 9 57 295 53 277 1.19e-27 112
Msa0622200 AT5G10740.1 32.576 264 145 10 39 295 40 277 2.15e-27 112
Msa0622200 AT5G10740.2 32.576 264 145 10 39 295 40 277 2.15e-27 112
Msa0622200 AT5G24940.1 32.075 265 145 11 39 295 40 277 1.78e-26 111
Msa0622200 AT1G43900.1 32.967 273 146 14 34 295 120 366 8.81e-26 108
Msa0622200 AT1G78200.5 34.322 236 128 10 68 295 19 235 1.02e-25 105
Msa0622200 AT1G78200.4 34.322 236 128 10 68 295 19 235 1.02e-25 105
Msa0622200 AT4G26080.1 30.258 271 146 7 61 299 165 424 1.95e-25 108
Msa0622200 AT1G78200.1 34.322 236 128 10 68 295 64 280 3.37e-25 104
Msa0622200 AT1G78200.3 34.322 236 128 10 68 295 64 280 3.37e-25 104
Msa0622200 AT1G78200.2 34.322 236 128 10 68 295 64 280 3.37e-25 104
Msa0622200 AT1G22280.3 31.064 235 144 7 66 295 63 284 4.85e-25 104
Msa0622200 AT5G53140.1 32.031 256 143 12 46 295 115 345 1.27e-24 105
Msa0622200 AT5G53140.2 32.031 256 143 12 46 295 115 345 1.27e-24 105
Msa0622200 AT4G28400.3 31.760 233 135 8 68 295 45 258 2.52e-24 101
Msa0622200 AT1G67820.2 30.328 244 145 9 34 270 78 303 2.76e-24 104
Msa0622200 AT4G28400.1 31.760 233 135 8 68 295 67 280 3.89e-24 101
Msa0622200 AT2G20630.1 30.597 268 154 12 33 295 36 276 3.95e-24 101
Msa0622200 AT1G67820.1 31.646 237 137 10 34 263 114 332 4.32e-24 104
Msa0622200 AT5G57050.2 29.630 270 146 9 61 297 113 371 5.24e-24 103
Msa0622200 AT5G57050.1 31.365 271 140 11 61 297 153 411 9.28e-24 103
Msa0622200 AT2G30020.1 29.779 272 161 12 33 295 140 390 1.03e-23 102
Msa0622200 AT2G20630.2 30.337 267 154 12 33 294 36 275 1.90e-23 100
Msa0622200 AT1G34750.2 30.882 272 153 11 34 295 33 279 2.91e-23 99.4
Msa0622200 AT1G34750.1 30.882 272 153 11 34 295 33 279 2.91e-23 99.4
Msa0622200 AT1G34750.3 30.882 272 153 11 34 295 33 279 2.91e-23 99.4
Msa0622200 AT1G22280.1 31.064 235 138 8 66 295 63 278 4.28e-23 99.0
Msa0622200 AT2G40180.1 27.915 283 184 9 21 297 117 385 8.76e-23 99.8
Msa0622200 AT2G34740.3 32.353 204 113 7 66 266 113 294 2.84e-20 91.3
Msa0622200 AT2G34740.2 32.353 204 113 7 66 266 131 312 3.30e-20 91.3
Msa0622200 AT2G40860.1 29.643 280 156 9 36 299 396 650 1.00e-19 92.0
Msa0622200 AT2G40860.4 29.643 280 156 9 36 299 298 552 1.80e-19 91.3
Msa0622200 AT3G15260.2 31.330 233 136 9 68 295 73 286 1.01e-18 86.7
Msa0622200 AT3G15260.1 31.330 233 136 9 68 295 73 286 1.01e-18 86.7
Msa0622200 AT3G51470.2 28.920 287 161 13 46 315 42 302 2.68e-18 85.9
Msa0622200 AT2G40860.2 29.958 237 128 7 36 258 396 608 3.91e-18 87.4
Msa0622200 AT3G51470.1 27.609 297 172 12 36 315 76 346 4.19e-18 85.9
Msa0622200 AT3G62260.3 29.323 266 152 13 67 311 26 276 8.02e-18 84.0
Msa0622200 AT3G62260.1 28.889 270 156 13 67 315 115 369 2.02e-17 84.0
Msa0622200 AT3G62260.2 28.889 270 156 13 67 315 116 370 2.11e-17 84.0
Msa0622200 AT2G25620.1 28.417 278 146 11 67 318 127 377 3.75e-17 83.2
Msa0622200 AT2G25620.2 28.417 278 146 11 67 318 127 377 3.75e-17 83.2
Msa0622200 AT1G34750.4 28.936 235 133 10 34 259 33 242 2.58e-16 78.6
Msa0622200 AT4G28400.2 30.159 189 110 6 68 252 67 237 3.80e-16 78.2
Msa0622200 AT1G18030.1 28.627 255 136 10 69 295 110 346 8.15e-16 79.0
Msa0622200 AT5G59220.1 28.571 210 124 7 63 260 143 338 1.90e-15 78.2
Msa0622200 AT2G33700.1 27.273 253 144 9 63 299 118 346 5.21e-15 76.6
Msa0622200 AT1G07430.1 28.311 219 124 7 64 265 153 355 1.66e-14 75.5
Msa0622200 AT1G17550.1 26.207 290 147 10 59 297 228 501 1.57e-13 72.8
Msa0622200 AT1G17550.2 26.207 290 147 10 59 297 228 501 1.57e-13 72.8
Msa0622200 AT5G26010.1 28.365 208 125 10 70 258 75 277 5.21e-13 70.1
Msa0622200 AT4G32950.1 27.519 258 162 8 71 314 75 321 6.02e-13 70.1
Msa0622200 AT2G40860.3 29.536 237 126 8 36 255 396 608 1.20e-12 70.1
Msa0622200 AT3G17250.1 27.953 254 141 13 66 295 156 391 1.25e-12 69.7
Msa0622200 AT3G11410.1 26.728 217 118 7 69 260 138 338 1.94e-12 68.9
Msa0622200 AT4G27800.1 24.390 328 175 13 40 320 67 368 2.79e-12 68.6
Msa0622200 AT1G72770.4 27.027 222 109 7 69 257 239 440 5.32e-12 68.2
Msa0622200 AT1G72770.1 27.027 222 109 7 69 257 239 440 5.32e-12 68.2
Msa0622200 AT1G72770.3 27.027 222 109 7 69 257 239 440 5.32e-12 68.2
Msa0622200 AT5G27930.3 33.125 160 90 7 103 251 148 301 6.42e-12 66.6
Msa0622200 AT1G18030.2 29.327 208 106 9 69 253 110 299 7.69e-12 66.2
Msa0622200 AT1G79630.2 30.319 188 113 6 131 304 151 334 1.64e-11 66.2
Msa0622200 AT1G79630.7 30.319 188 113 6 131 304 151 334 1.64e-11 66.2
Msa0622200 AT1G79630.6 30.319 188 113 6 131 304 111 294 1.83e-11 65.9
Msa0622200 AT1G79630.3 30.319 188 113 6 131 304 111 294 1.83e-11 65.9
Msa0622200 AT1G79630.4 30.319 188 113 6 131 304 111 294 1.83e-11 65.9
Msa0622200 AT1G79630.5 30.319 188 113 6 131 304 111 294 1.83e-11 65.9
Msa0622200 AT3G06270.1 29.066 289 157 14 43 297 68 342 2.13e-11 65.5
Msa0622200 AT1G79630.8 30.319 188 113 6 131 304 217 400 2.27e-11 65.9
Msa0622200 AT1G16220.1 26.587 252 147 8 84 301 131 378 2.27e-11 65.9
Msa0622200 AT1G79630.1 30.319 188 113 6 131 304 221 404 3.23e-11 65.5
Msa0622200 AT5G01700.1 27.469 324 183 17 60 345 23 332 3.71e-11 64.7
Msa0622200 AT3G02750.2 30.233 215 120 10 106 296 186 394 4.39e-11 65.1
Msa0622200 AT3G02750.1 30.233 215 120 10 106 296 186 394 4.39e-11 65.1
Msa0622200 AT4G27800.3 25.385 260 130 9 40 257 67 304 5.80e-11 63.9
Msa0622200 AT4G27800.2 25.385 260 130 9 40 257 67 304 5.80e-11 63.9
Msa0622200 AT2G29380.1 25.524 286 163 12 2 261 46 307 9.11e-11 63.5
Msa0622200 AT5G51760.2 24.597 248 145 7 40 260 86 318 9.64e-11 63.5

Find 178 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATAGCCTCTGATGGTATT+TGG 0.132240 4_2:-74563874 Msa0622200:CDS
AAAGTAATCTTCTCCTTTCT+TGG 0.184037 4_2:+74565348 None:intergenic
TAATCAATACAATTATATTT+TGG 0.194950 4_2:+74562406 None:intergenic
GTAGGACGACTCAATATATT+TGG 0.216620 4_2:-74564227 Msa0622200:CDS
GCTACATTTGTTATAGTTGA+TGG 0.263958 4_2:-74564392 Msa0622200:CDS
AGGGGCGGATTATAGGTATT+TGG 0.268674 4_2:-74562249 None:intergenic
AGTTGTTACAAATTTGATTC+TGG 0.270681 4_2:-74562886 Msa0622200:three_prime_UTR
GGACACTTTATCTAATGATA+TGG 0.286784 4_2:-74563852 Msa0622200:CDS
ATGCTAACCACACTTCTCTT+TGG 0.296822 4_2:-74563574 Msa0622200:CDS
TTCTTCTTCAACCTTTGTTC+CGG 0.319393 4_2:-74562503 Msa0622200:three_prime_UTR
TCATACACAGGGGAAACTTC+TGG 0.320861 4_2:-74564422 Msa0622200:intron
TATAGCCTCTGATGGTATTT+GGG 0.324814 4_2:-74563873 Msa0622200:CDS
GCATCTCTTATATGAACTAT+TGG 0.342419 4_2:-74562456 Msa0622200:three_prime_UTR
CGACAGTTTGTGCAGAGAAA+TGG 0.342448 4_2:+74563113 None:intergenic
CTGTCACTGTTGCATCTGTT+GGG 0.347808 4_2:-74564364 Msa0622200:CDS
ACAGATTGCCACAGGGTTCC+CGG 0.349347 4_2:-74565316 Msa0622200:CDS
GGGGCGGATTATAGGTATTT+GGG 0.353940 4_2:-74562248 None:intergenic
AAAAGAGACTTTACCATTGA+AGG 0.355309 4_2:+74562737 None:intergenic
TCATCCTCCGTTTCTACTCT+AGG 0.363746 4_2:-74565768 Msa0622200:five_prime_UTR
TTTGAAGTAGGTGGTAATAC+AGG 0.365809 4_2:+74563610 None:intergenic
ATAGTAATCATCTAATATTA+TGG 0.366911 4_2:-74563036 Msa0622200:exon
GCTTGGCCTCTTTCCTTCCA+TGG 0.373761 4_2:+74563076 None:intergenic
GAAAGAAAACAATAACAAAA+AGG 0.377524 4_2:+74565890 None:intergenic
TTTCCTCAGCTTTCAAGTGC+TGG 0.379190 4_2:-74563908 Msa0622200:intron
TAGGACGACTCAATATATTT+GGG 0.381148 4_2:-74564226 Msa0622200:CDS
GTTCCATTGGCCACTTTGAT+TGG 0.383557 4_2:-74565433 Msa0622200:CDS
TATGTACAGGGGCGGATTAT+AGG 0.387021 4_2:-74562256 Msa0622200:three_prime_UTR
CGATACCGCAAGATATCAAC+AGG 0.387187 4_2:-74564588 Msa0622200:CDS
TGCTGCAAAGCTGGTGGTTA+AGG 0.391611 4_2:-74563795 Msa0622200:intron
ATCTCAGAATTCTTATCAAA+TGG 0.398459 4_2:+74563236 None:intergenic
TGGAAGAGAATGTAGAAGAG+AGG 0.399590 4_2:-74564277 Msa0622200:CDS
CTTCCTCGCGCTCTAGTTGT+TGG 0.403102 4_2:-74564547 Msa0622200:CDS
GGCAGGTTGTATCATCCTTC+AGG 0.404506 4_2:+74563662 None:intergenic
ACTTGCTTAACATGTGGTAT+TGG 0.408350 4_2:+74564035 None:intergenic
AAGCTTGCTAGTGGCTTTGT+TGG 0.414421 4_2:+74563531 None:intergenic
TATGGCCGCCATGTCATGTC+GGG 0.417110 4_2:-74563834 Msa0622200:CDS
TGCGGAGCTTGCTGCAAAGC+TGG 0.418595 4_2:-74563804 Msa0622200:CDS
CAAGTTTGGACAAGCTGGAT+TGG 0.419868 4_2:-74565371 Msa0622200:CDS
GACAGTTTGTGCAGAGAAAT+GGG 0.420328 4_2:+74563114 None:intergenic
TCTGGCTTGTGCTCGGCTGT+TGG 0.422320 4_2:-74562868 Msa0622200:three_prime_UTR
CTCTAACGTCTCCGAAGATC+AGG 0.426276 4_2:-74562699 Msa0622200:three_prime_UTR
CGGCTGTTGGACTGACTGAT+AGG 0.428957 4_2:-74562855 Msa0622200:three_prime_UTR
AAGACGGAAAACGCGGTTGA+TGG 0.435385 4_2:+74565289 None:intergenic
ATCAAAGTGGCCAATGGAAC+TGG 0.436317 4_2:+74565436 None:intergenic
ACGGAGGATGAGATTGAGAA+TGG 0.438609 4_2:+74565780 None:intergenic
CATCCTCCGTTTCTACTCTA+GGG 0.440035 4_2:-74565767 Msa0622200:five_prime_UTR
CCTTCCCATGGCTTAGATGC+TGG 0.446835 4_2:+74563137 None:intergenic
CTGAGTATCTAATATGCAAC+GGG 0.448005 4_2:+74564337 None:intergenic
ACTGTCACTGTTGCATCTGT+TGG 0.448709 4_2:-74564365 Msa0622200:CDS
TTTGTCAAGTTTGGACAAGC+TGG 0.455005 4_2:-74565376 Msa0622200:CDS
TTACCATTGAAGGTCTCAAA+TGG 0.455901 4_2:+74562747 None:intergenic
TTGTGCCTATCTAGATCAAT+TGG 0.456296 4_2:-74564086 Msa0622200:CDS
AGGTAGGTCCTCTTCGCTGC+TGG 0.460279 4_2:-74564118 Msa0622200:CDS
CAGATTGCCACAGGGTTCCC+GGG 0.464567 4_2:-74565315 Msa0622200:CDS
ACAAATACAAACTGTTAGCT+TGG 0.466247 4_2:+74562798 None:intergenic
GCTTGTCCAAACTTGACAAA+AGG 0.466330 4_2:+74565379 None:intergenic
TGTCTCCAATTGATCTAGAT+AGG 0.466362 4_2:+74564081 None:intergenic
AAACATGGTGTCTAGTAGAT+AGG 0.468778 4_2:-74562830 Msa0622200:three_prime_UTR
CTCCCATTTGAGACCTTCAA+TGG 0.470377 4_2:-74562750 Msa0622200:three_prime_UTR
GGTCCTCTTCGCTGCTGGCC+CGG 0.476949 4_2:-74564113 Msa0622200:CDS
AGCTTTCAAGTGCTGGTGGA+AGG 0.479535 4_2:-74563901 Msa0622200:CDS
CAACAGGGATGCATGGCTAC+AGG 0.481389 4_2:-74564572 Msa0622200:CDS
GATCACAAAATCCTGATCTT+CGG 0.482157 4_2:+74562688 None:intergenic
TTAAAACTGCAGGCTTGGTA+AGG 0.482420 4_2:-74563264 Msa0622200:intron
TAATCAAAACAGATTGCCAC+AGG 0.485310 4_2:-74565324 Msa0622200:CDS
CCAGTCTATGATCAACTGTC+AGG 0.485755 4_2:+74564297 None:intergenic
CCGTTGCATATTAGATACTC+AGG 0.487206 4_2:-74564336 Msa0622200:CDS
TCTAGATAGGCACAATCCAC+CGG 0.487715 4_2:+74564094 None:intergenic
GAAATGAGGTTAAGTAAGAT+AGG 0.487726 4_2:-74562927 Msa0622200:three_prime_UTR
GCTGTAACGGTAGGTCTGCT+TGG 0.488420 4_2:+74563059 None:intergenic
TACGTTGCTAACATATGTAC+AGG 0.489478 4_2:-74562269 Msa0622200:three_prime_UTR
AGCTTTGCAGCAAGCTCCGC+AGG 0.489755 4_2:+74563806 None:intergenic
AATAATATCTACAACAAGGC+AGG 0.494608 4_2:+74563645 None:intergenic
CCTCAGCTTTCAAGTGCTGG+TGG 0.495792 4_2:-74563905 Msa0622200:intron
GTTACTCATTGTCGTCAAGA+AGG 0.497755 4_2:-74562594 Msa0622200:three_prime_UTR
CGGAGGATGAGATTGAGAAT+GGG 0.499008 4_2:+74565781 None:intergenic
TCGTCCTACTTCGCCACCAC+TGG 0.499559 4_2:+74564241 None:intergenic
TACCATTGAAGGTCTCAAAT+GGG 0.503717 4_2:+74562748 None:intergenic
AACGCGGTTGATGGATCCCC+GGG 0.503812 4_2:+74565298 None:intergenic
CAACAACTAGAGCGCGAGGA+AGG 0.504666 4_2:+74564548 None:intergenic
CATTTGTTATAGTTGATGGA+TGG 0.506436 4_2:-74564388 Msa0622200:CDS
ATTTGATTCTGGCTTGTGCT+CGG 0.506967 4_2:-74562875 Msa0622200:three_prime_UTR
GAAGCCATCACCAGTTCCAT+TGG 0.507591 4_2:-74565446 Msa0622200:CDS
GGTGTTAGTGTGCTGGCAGG+TGG 0.508914 4_2:+74562570 None:intergenic
GAACAAAGGTTGAAGAAGAA+TGG 0.509121 4_2:+74562506 None:intergenic
ACTAGCAAGCTTTCTGCAGT+TGG 0.512919 4_2:-74563520 Msa0622200:CDS
ACTGCCAGTGGTGGCGAAGT+AGG 0.518277 4_2:-74564245 Msa0622200:CDS
TTTCTCCAGCATCTAAGCCA+TGG 0.519690 4_2:-74563142 Msa0622200:CDS
CAAGCTGGATTGGCCAAGAA+AGG 0.521862 4_2:-74565361 Msa0622200:CDS
AGATCCAAGACTATATTAAA+CGG 0.522062 4_2:-74562347 Msa0622200:three_prime_UTR
TTGTAAGTAAACTGAAGCTA+TGG 0.523167 4_2:-74562779 Msa0622200:three_prime_UTR
GCTTTCTGCAGTTGGTGTTG+TGG 0.524033 4_2:-74563512 Msa0622200:CDS
TTCTCCAGCATCTAAGCCAT+GGG 0.524215 4_2:-74563141 Msa0622200:CDS
AATGGTCTATCGGTGAACTC+TGG 0.526436 4_2:-74563173 Msa0622200:CDS
CCTGACAGTTGATCATAGAC+TGG 0.530356 4_2:-74564297 Msa0622200:CDS
CTTATATGAACTATTGGATG+CGG 0.534651 4_2:-74562450 Msa0622200:three_prime_UTR
TCTTAGATGTGCAAGAAATG+AGG 0.538698 4_2:-74562941 Msa0622200:three_prime_UTR
TTTGGTGTTAGTGTGCTGGC+AGG 0.541605 4_2:+74562567 None:intergenic
GATAAACCCTAGAGTAGAAA+CGG 0.544748 4_2:+74565761 None:intergenic
TCTACCGTTTAATATAGTCT+TGG 0.546939 4_2:+74562343 None:intergenic
CCGCTGTGCTATTTGCCAAG+TGG 0.547166 4_2:-74563210 Msa0622200:CDS
TGTCACTGTTGCATCTGTTG+GGG 0.547608 4_2:-74564363 Msa0622200:CDS
TTGAAGTAGGTGGTAATACA+GGG 0.548361 4_2:+74563611 None:intergenic
TGACACGGAGTTTCAGAAGA+AGG 0.553825 4_2:-74564512 Msa0622200:CDS
GTGTTAGTGTGCTGGCAGGT+GGG 0.553947 4_2:+74562571 None:intergenic
CGGCCAATCAAAGTGGCCAA+TGG 0.555333 4_2:+74565430 None:intergenic
GTTCTGCAATGCTTATAGAA+AGG 0.558028 4_2:-74563471 Msa0622200:intron
CAGAGAAATGGGCCTTCCCA+TGG 0.558873 4_2:+74563125 None:intergenic
AAACGCGGTTGATGGATCCC+CGG 0.560628 4_2:+74565297 None:intergenic
ACTTTGCAATCATAAACATC+CGG 0.564660 4_2:+74562484 None:intergenic
GGAAGAGAATGTAGAAGAGA+GGG 0.565211 4_2:-74564276 Msa0622200:CDS
GGTAATACAGGGTGGTCAGA+AGG 0.568381 4_2:+74563622 None:intergenic
TCAATTGGAGACACAGATGT+GGG 0.570505 4_2:-74564071 Msa0622200:CDS
TAGTCTTGGATCTAATAAAG+AGG 0.572294 4_2:+74562357 None:intergenic
TTAGATGCTGGAGAAAAGAA+AGG 0.572490 4_2:+74563149 None:intergenic
ATCATAAACATCCGGAACAA+AGG 0.573814 4_2:+74562492 None:intergenic
TCTAAGATCTAGAGGCCTGA+AGG 0.576729 4_2:-74563677 Msa0622200:CDS
ACTTTCACTTGCTTAACATG+TGG 0.580187 4_2:+74564029 None:intergenic
CATTTCTCTGCACAAACTGT+CGG 0.582330 4_2:-74563112 Msa0622200:CDS
AAGATGCCATGGAAGGAAAG+AGG 0.583246 4_2:-74563082 Msa0622200:CDS
CCACCGGGCCAGCAGCGAAG+AGG 0.584691 4_2:+74564110 None:intergenic
CCTCTTCGCTGCTGGCCCGG+TGG 0.584827 4_2:-74564110 Msa0622200:CDS
AAGATATCAACAGGGATGCA+TGG 0.585657 4_2:-74564579 Msa0622200:CDS
CTAGATAGGCACAATCCACC+GGG 0.587266 4_2:+74564095 None:intergenic
CCTGAGTATCTAATATGCAA+CGG 0.590038 4_2:+74564336 None:intergenic
GAGCGTGTTACTGCCAGTGG+TGG 0.591453 4_2:-74564254 Msa0622200:CDS
TGAGTAAACGTGAATTGTCA+AGG 0.591578 4_2:-74565471 Msa0622200:CDS
GATTACTATGCTGTAACGGT+AGG 0.591791 4_2:+74563050 None:intergenic
ATAAAGTAATACCGCAAAGA+CGG 0.592761 4_2:+74565273 None:intergenic
GCATCCCTGTTGATATCTTG+CGG 0.595250 4_2:+74564583 None:intergenic
ATCAATTGGAGACACAGATG+TGG 0.598665 4_2:-74564072 Msa0622200:CDS
AGTGTCCCAAATACCATCAG+AGG 0.599906 4_2:+74563868 None:intergenic
TTCACCGATAGACCATTACC+AGG 0.600145 4_2:+74563179 None:intergenic
GTGGCCAATGGAACTGGTGA+TGG 0.600467 4_2:+74565442 None:intergenic
CTTTCTCATTTCGAATCTCG+CGG 0.603912 4_2:+74565410 None:intergenic
AAATCAAGCATGCTCACTGT+CGG 0.606335 4_2:+74562984 None:intergenic
TACCGCAAAGACGGAAAACG+CGG 0.607314 4_2:+74565282 None:intergenic
AGGTAGACCCCGACATGACA+TGG 0.607364 4_2:+74563826 None:intergenic
AGGCTTATTATAGCCTCTGA+TGG 0.608901 4_2:-74563881 Msa0622200:CDS
AACAACTAGAGCGCGAGGAA+GGG 0.608942 4_2:+74564549 None:intergenic
ATATGGCCGCCATGTCATGT+CGG 0.614370 4_2:-74563835 Msa0622200:CDS
CGTTGCATATTAGATACTCA+GGG 0.617011 4_2:-74564335 Msa0622200:CDS
ACGTTGCTAACATATGTACA+GGG 0.617188 4_2:-74562268 Msa0622200:three_prime_UTR
AGATGATTACTATGCTGTAA+CGG 0.617305 4_2:+74563046 None:intergenic
GTCATGTCGGGGTCTACCTG+CGG 0.618990 4_2:-74563822 Msa0622200:CDS
AGGGAGCGTGTTACTGCCAG+TGG 0.622185 4_2:-74564257 Msa0622200:CDS
AAACCAACAACTAGAGCGCG+AGG 0.623767 4_2:+74564544 None:intergenic
AGGACGACTCAATATATTTG+GGG 0.625135 4_2:-74564225 Msa0622200:CDS
TTTCTTTCCAAAGAGAAGTG+TGG 0.629336 4_2:+74563567 None:intergenic
CAATTGGAGACACAGATGTG+GGG 0.631303 4_2:-74564070 Msa0622200:CDS
CAGGAAGCTCTAAGATCTAG+AGG 0.631425 4_2:-74563685 Msa0622200:CDS
GGGCGGATTATAGGTATTTG+GGG 0.632189 4_2:-74562247 None:intergenic
CCAGCATCTAAGCCATGGGA+AGG 0.633480 4_2:-74563137 Msa0622200:CDS
CATGGTGTCTAGTAGATAGG+TGG 0.633523 4_2:-74562827 Msa0622200:three_prime_UTR
AACTGCAGAAAGCTTGCTAG+TGG 0.637588 4_2:+74563522 None:intergenic
GGAGCTTGCTGCAAAGCTGG+TGG 0.644503 4_2:-74563801 Msa0622200:CDS
AGATTGCCACAGGGTTCCCG+GGG 0.645904 4_2:-74565314 Msa0622200:CDS
AATTGGAGACACAGATGTGG+GGG 0.647919 4_2:-74564069 Msa0622200:CDS
GACACGGAGTTTCAGAAGAA+GGG 0.648948 4_2:-74564511 Msa0622200:intron
TGCTAACATATGTACAGGGG+CGG 0.649614 4_2:-74562264 Msa0622200:three_prime_UTR
ATGGCCGCCATGTCATGTCG+GGG 0.652224 4_2:-74563833 Msa0622200:CDS
AATCTCGCGGCCAATCAAAG+TGG 0.661716 4_2:+74565423 None:intergenic
GTACTGACATGAGGAAAATG+CGG 0.674098 4_2:+74565724 None:intergenic
AATCAAAACAGATTGCCACA+GGG 0.679930 4_2:-74565323 Msa0622200:CDS
CACCGATAGACCATTACCAG+GGG 0.684240 4_2:+74563181 None:intergenic
ATGGATCCCCGGGAACCCTG+TGG 0.685150 4_2:+74565308 None:intergenic
GGACGACTCAATATATTTGG+GGG 0.690993 4_2:-74564224 Msa0622200:CDS
TCACCGATAGACCATTACCA+GGG 0.694420 4_2:+74563180 None:intergenic
AAGGAATAATATCTACAACA+AGG 0.707247 4_2:+74563641 None:intergenic
CGTTGCTAACATATGTACAG+GGG 0.727008 4_2:-74562267 Msa0622200:three_prime_UTR
AAACCCTAGAGTAGAAACGG+AGG 0.727974 4_2:+74565764 None:intergenic
ACCGATAGACCATTACCAGG+GGG 0.728167 4_2:+74563182 None:intergenic
TGCATATTAGATACTCAGGG+AGG 0.745767 4_2:-74564332 Msa0622200:CDS
AAGTAGGTGGTAATACAGGG+TGG 0.749203 4_2:+74563614 None:intergenic
TAGACCCCGACATGACATGG+CGG 0.769473 4_2:+74563829 None:intergenic
ACTGACTGATAGGACAAACA+TGG 0.775033 4_2:-74562845 Msa0622200:three_prime_UTR
CCACTTGGCAAATAGCACAG+CGG 0.793054 4_2:+74563210 None:intergenic
GATACCGCAAGATATCAACA+GGG 0.804220 4_2:-74564587 Msa0622200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGAATTTTTTAATTTATGT+TGG - chr4_2:74562603-74562622 Msa0622200:three_prime_UTR 10.0%
!!! TGGAATTTTTTTTTTTTTTT+TGG - chr4_2:74562623-74562642 Msa0622200:three_prime_UTR 10.0%
!!! TAATCAATACAATTATATTT+TGG + chr4_2:74565768-74565787 None:intergenic 10.0%
!!! ATATTTGAGTTTTAAGAAAT+TGG - chr4_2:74563000-74563019 Msa0622200:three_prime_UTR 15.0%
!! ATAGTAATCATCTAATATTA+TGG - chr4_2:74565135-74565154 Msa0622200:intron 15.0%
!! GAAAGAAAACAATAACAAAA+AGG + chr4_2:74562284-74562303 None:intergenic 20.0%
!!! TTTTTTTTTTTTGGATGAGT+AGG - chr4_2:74562632-74562651 Msa0622200:three_prime_UTR 20.0%
!! AGTAAATAAGCAAATCTAAA+CGG + chr4_2:74563120-74563139 None:intergenic 20.0%
!! ATGCAAATATGAATTTAGTT+GGG + chr4_2:74564742-74564761 None:intergenic 20.0%
!! AATGCAAATATGAATTTAGT+TGG + chr4_2:74564743-74564762 None:intergenic 20.0%
!!! AAATTATCCTTTTTCCTATT+TGG - chr4_2:74564845-74564864 Msa0622200:intron 20.0%
!!! AATTATCCTTTTTCCTATTT+GGG - chr4_2:74564846-74564865 Msa0622200:intron 20.0%
!!! ATCTAATAAAGAGGAATTTT+AGG + chr4_2:74565808-74565827 None:intergenic 20.0%
!!! TATCGACTAATTAACATTTT+TGG + chr4_2:74565855-74565874 None:intergenic 20.0%
!!! AGGTTGTCTTTTTTGTTTTT+GGG + chr4_2:74562264-74562283 None:intergenic 25.0%
!!! AAGGTTGTCTTTTTTGTTTT+TGG + chr4_2:74562265-74562284 None:intergenic 25.0%
!!! AGCTTTTTCTGTAATTTGAT+TGG + chr4_2:74562326-74562345 None:intergenic 25.0%
! TAGCAGAAAATGTAATTAAG+AGG + chr4_2:74562491-74562510 None:intergenic 25.0%
! AATGATGTGCATTTATAATC+TGG + chr4_2:74562528-74562547 None:intergenic 25.0%
! AACTCAACTCAAATAACTAT+AGG + chr4_2:74562941-74562960 None:intergenic 25.0%
! TCACATTTATAAGTAACAAG+TGG - chr4_2:74563430-74563449 Msa0622200:intron 25.0%
! CACATTTATAAGTAACAAGT+GGG - chr4_2:74563431-74563450 Msa0622200:intron 25.0%
! ACATTTATAAGTAACAAGTG+GGG - chr4_2:74563432-74563451 Msa0622200:intron 25.0%
!! GTTGATAAGGAATTCTTAAT+TGG - chr4_2:74563484-74563503 Msa0622200:CDS 25.0%
! ACATCTTAATTTCATACACA+GGG - chr4_2:74563738-74563757 Msa0622200:intron 25.0%
! TTAAGTAACTGTTACTAGAA+GGG + chr4_2:74564000-74564019 None:intergenic 25.0%
! TTTAAGTAACTGTTACTAGA+AGG + chr4_2:74564001-74564020 None:intergenic 25.0%
! AAAGAACGTAATAATGAAAC+CGG + chr4_2:74564171-74564190 None:intergenic 25.0%
!! CATTATTACGTTCTTTTCTT+TGG - chr4_2:74564175-74564194 Msa0622200:intron 25.0%
! AAGGAATAATATCTACAACA+AGG + chr4_2:74564533-74564552 None:intergenic 25.0%
!!! TTATGCTTCTTTTTTGAAGT+AGG + chr4_2:74564576-74564595 None:intergenic 25.0%
! TGTATATCTTGAAGTGTAAT+AGG - chr4_2:74564762-74564781 Msa0622200:intron 25.0%
! ATCTCAGAATTCTTATCAAA+TGG + chr4_2:74564938-74564957 None:intergenic 25.0%
! AGTTGTTACAAATTTGATTC+TGG - chr4_2:74565285-74565304 Msa0622200:CDS 25.0%
!! TTCATGAACAATTTTGTGTT+GGG + chr4_2:74565526-74565545 None:intergenic 25.0%
!! ATTCATGAACAATTTTGTGT+TGG + chr4_2:74565527-74565546 None:intergenic 25.0%
! ACCAAAACGATAAAAAATAG+AGG - chr4_2:74565621-74565640 Msa0622200:intron 25.0%
! CCAAAACGATAAAAAATAGA+GGG - chr4_2:74565622-74565641 Msa0622200:intron 25.0%
! AGATCCAAGACTATATTAAA+CGG - chr4_2:74565824-74565843 Msa0622200:five_prime_UTR 25.0%
!!! TTTTTTTGGATGAGTAGGTA+TGG - chr4_2:74562637-74562656 Msa0622200:three_prime_UTR 30.0%
! GAAAAACCTTTTGTCAAGTT+TGG - chr4_2:74562786-74562805 Msa0622200:three_prime_UTR 30.0%
AAAGTAATCTTCTCCTTTCT+TGG + chr4_2:74562826-74562845 None:intergenic 30.0%
ATAAAGTAATACCGCAAAGA+CGG + chr4_2:74562901-74562920 None:intergenic 30.0%
TGCGGTATTACTTTATTCTT+TGG - chr4_2:74562905-74562924 Msa0622200:three_prime_UTR 30.0%
GAGATACATTTGTCTTTCTT+CGG - chr4_2:74563085-74563104 Msa0622200:CDS 30.0%
! ATTTGTCTTTCTTCGGTTTT+AGG - chr4_2:74563092-74563111 Msa0622200:CDS 30.0%
!! AGACTGTTTGAGACATTTTA+TGG - chr4_2:74563156-74563175 Msa0622200:CDS 30.0%
ATTAAGCTGAAAACAGCTTA+TGG + chr4_2:74563200-74563219 None:intergenic 30.0%
! AAAGTGCTTGTAAGCATTTA+GGG + chr4_2:74563339-74563358 None:intergenic 30.0%
! TAAAGTGCTTGTAAGCATTT+AGG + chr4_2:74563340-74563359 None:intergenic 30.0%
! ATCAAGTTGTTTATCCAAAC+AGG - chr4_2:74563359-74563378 Msa0622200:intron 30.0%
CAATGGTTATGATGTTGATA+AGG - chr4_2:74563471-74563490 Msa0622200:intron 30.0%
! CTTAATTGGCAGATTTTTGA+CGG - chr4_2:74563498-74563517 Msa0622200:CDS 30.0%
! TTAATTGGCAGATTTTTGAC+GGG - chr4_2:74563499-74563518 Msa0622200:CDS 30.0%
GACATCTTAATTTCATACAC+AGG - chr4_2:74563737-74563756 Msa0622200:intron 30.0%
CATCTTAATTTCATACACAG+GGG - chr4_2:74563739-74563758 Msa0622200:intron 30.0%
!! GCTACATTTGTTATAGTTGA+TGG - chr4_2:74563779-74563798 Msa0622200:intron 30.0%
!! CATTTGTTATAGTTGATGGA+TGG - chr4_2:74563783-74563802 Msa0622200:intron 30.0%
TAGGACGACTCAATATATTT+GGG - chr4_2:74563945-74563964 Msa0622200:intron 30.0%
TTGTTCGCAAATATGTTTGT+AGG - chr4_2:74564033-74564052 Msa0622200:CDS 30.0%
TGATTGTGAGAAATCTAACT+TGG + chr4_2:74564229-74564248 None:intergenic 30.0%
GGACACTTTATCTAATGATA+TGG - chr4_2:74564319-74564338 Msa0622200:CDS 30.0%
GGGAGAAAAGAAAAGAAAAA+AGG + chr4_2:74564467-74564486 None:intergenic 30.0%
! TTTTTCTTTTCTTTTCTCCC+AGG - chr4_2:74564467-74564486 Msa0622200:intron 30.0%
AATAATATCTACAACAAGGC+AGG + chr4_2:74564529-74564548 None:intergenic 30.0%
TATCTTAACCAACTAGTGAT+TGG - chr4_2:74564818-74564837 Msa0622200:intron 30.0%
ATTTCATTCCAATCACTAGT+TGG + chr4_2:74564829-74564848 None:intergenic 30.0%
TATACACCCAAATAGGAAAA+AGG + chr4_2:74564855-74564874 None:intergenic 30.0%
ACAGAAATATACACCCAAAT+AGG + chr4_2:74564862-74564881 None:intergenic 30.0%
!! TCCATTTTTCTTAAAACTGC+AGG - chr4_2:74564897-74564916 Msa0622200:intron 30.0%
AGATGATTACTATGCTGTAA+CGG + chr4_2:74565128-74565147 None:intergenic 30.0%
GAAATGAGGTTAAGTAAGAT+AGG - chr4_2:74565244-74565263 Msa0622200:intron 30.0%
ACAAATACAAACTGTTAGCT+TGG + chr4_2:74565376-74565395 None:intergenic 30.0%
TTGTAAGTAAACTGAAGCTA+TGG - chr4_2:74565392-74565411 Msa0622200:CDS 30.0%
AAAAGAGACTTTACCATTGA+AGG + chr4_2:74565437-74565456 None:intergenic 30.0%
! TCATGAACAATTTTGTGTTG+GGG + chr4_2:74565525-74565544 None:intergenic 30.0%
!!! CCCTCTATTTTTTATCGTTT+TGG + chr4_2:74565625-74565644 None:intergenic 30.0%
ACTTTGCAATCATAAACATC+CGG + chr4_2:74565690-74565709 None:intergenic 30.0%
GCATCTCTTATATGAACTAT+TGG - chr4_2:74565715-74565734 Msa0622200:intron 30.0%
CTTATATGAACTATTGGATG+CGG - chr4_2:74565721-74565740 Msa0622200:intron 30.0%
! TAGTCTTGGATCTAATAAAG+AGG + chr4_2:74565817-74565836 None:intergenic 30.0%
TCTACCGTTTAATATAGTCT+TGG + chr4_2:74565831-74565850 None:intergenic 30.0%
TGGTACAAAAAGACTATGAG+AGG + chr4_2:74562306-74562325 None:intergenic 35.0%
GATAAACCCTAGAGTAGAAA+CGG + chr4_2:74562413-74562432 None:intergenic 35.0%
! CGAAAAAATGTACTGACATG+AGG + chr4_2:74562459-74562478 None:intergenic 35.0%
! TTTAGATCTAGAACTGATCG+TGG + chr4_2:74562561-74562580 None:intergenic 35.0%
TGAGTAAACGTGAATTGTCA+AGG - chr4_2:74562700-74562719 Msa0622200:three_prime_UTR 35.0%
TAATCAAAACAGATTGCCAC+AGG - chr4_2:74562847-74562866 Msa0622200:three_prime_UTR 35.0%
AATCAAAACAGATTGCCACA+GGG - chr4_2:74562848-74562867 Msa0622200:three_prime_UTR 35.0%
TGGAAGTTTATTCTGCATAG+TGG - chr4_2:74563056-74563075 Msa0622200:CDS 35.0%
! TTATTCTGCATAGTGGAGAA+TGG - chr4_2:74563063-74563082 Msa0622200:CDS 35.0%
GCATCAATTTATTCCTGCAA+TGG - chr4_2:74563454-74563473 Msa0622200:intron 35.0%
ATCAACATCATAACCATTGC+AGG + chr4_2:74563470-74563489 None:intergenic 35.0%
CTGAGTATCTAATATGCAAC+GGG + chr4_2:74563837-74563856 None:intergenic 35.0%
CCTGAGTATCTAATATGCAA+CGG + chr4_2:74563838-74563857 None:intergenic 35.0%
CGTTGCATATTAGATACTCA+GGG - chr4_2:74563836-74563855 Msa0622200:CDS 35.0%
GTAGGACGACTCAATATATT+TGG - chr4_2:74563944-74563963 Msa0622200:intron 35.0%
AGGACGACTCAATATATTTG+GGG - chr4_2:74563946-74563965 Msa0622200:intron 35.0%
TGTTACTAGAAGGGAAAAAG+TGG + chr4_2:74563991-74564010 None:intergenic 35.0%
TCGCAAATATGTTTGTAGGT+AGG - chr4_2:74564037-74564056 Msa0622200:CDS 35.0%
TTGTGCCTATCTAGATCAAT+TGG - chr4_2:74564085-74564104 Msa0622200:CDS 35.0%
TGTCTCCAATTGATCTAGAT+AGG + chr4_2:74564093-74564112 None:intergenic 35.0%
ACTTGCTTAACATGTGGTAT+TGG + chr4_2:74564139-74564158 None:intergenic 35.0%
ACTTTCACTTGCTTAACATG+TGG + chr4_2:74564145-74564164 None:intergenic 35.0%
!! TCTTTGGTGTCTCTTATATG+TGG - chr4_2:74564191-74564210 Msa0622200:intron 35.0%
TTATAGCCTCTGATGGTATT+TGG - chr4_2:74564297-74564316 Msa0622200:CDS 35.0%
TATAGCCTCTGATGGTATTT+GGG - chr4_2:74564298-74564317 Msa0622200:CDS 35.0%
! GACATTCTTCTCACATTTTC+TGG - chr4_2:74564410-74564429 Msa0622200:CDS 35.0%
!! TCTTCTCACATTTTCTGGAA+TGG - chr4_2:74564415-74564434 Msa0622200:CDS 35.0%
!!! CATTTTCTGGAATGGATGTT+TGG - chr4_2:74564423-74564442 Msa0622200:intron 35.0%
TTGAAGTAGGTGGTAATACA+GGG + chr4_2:74564563-74564582 None:intergenic 35.0%
! TTTGAAGTAGGTGGTAATAC+AGG + chr4_2:74564564-74564583 None:intergenic 35.0%
!!! TGCTTCTTTTTTGAAGTAGG+TGG + chr4_2:74564573-74564592 None:intergenic 35.0%
TTTCTTTCCAAAGAGAAGTG+TGG + chr4_2:74564607-74564626 None:intergenic 35.0%
GTTCTGCAATGCTTATAGAA+AGG - chr4_2:74564700-74564719 Msa0622200:intron 35.0%
GCAATGCTTATAGAAAGGTA+TGG - chr4_2:74564705-74564724 Msa0622200:intron 35.0%
! TGCTTATAGAAAGGTATGGA+TGG - chr4_2:74564709-74564728 Msa0622200:intron 35.0%
!!! GCCTGCAGTTTTAAGAAAAA+TGG + chr4_2:74564901-74564920 None:intergenic 35.0%
! TTTTCTTAAAACTGCAGGCT+TGG - chr4_2:74564902-74564921 Msa0622200:intron 35.0%
TTAGATGCTGGAGAAAAGAA+AGG + chr4_2:74565025-74565044 None:intergenic 35.0%
AACAAAAAAGATGCCATGGA+AGG - chr4_2:74565082-74565101 Msa0622200:intron 35.0%
! GCTTGATTTTGCATTTTCGT+TGG - chr4_2:74565201-74565220 Msa0622200:intron 35.0%
TCTTAGATGTGCAAGAAATG+AGG - chr4_2:74565230-74565249 Msa0622200:intron 35.0%
AAACATGGTGTCTAGTAGAT+AGG - chr4_2:74565341-74565360 Msa0622200:CDS 35.0%
TACCATTGAAGGTCTCAAAT+GGG + chr4_2:74565426-74565445 None:intergenic 35.0%
TTACCATTGAAGGTCTCAAA+TGG + chr4_2:74565427-74565446 None:intergenic 35.0%
!!! AAAGTCTCTTTTGAGACTAG+AGG - chr4_2:74565445-74565464 Msa0622200:CDS 35.0%
GATCACAAAATCCTGATCTT+CGG + chr4_2:74565486-74565505 None:intergenic 35.0%
! CATGAACAATTTTGTGTTGG+GGG + chr4_2:74565524-74565543 None:intergenic 35.0%
GAACAAAGGTTGAAGAAGAA+TGG + chr4_2:74565668-74565687 None:intergenic 35.0%
TTCTTCTTCAACCTTTGTTC+CGG - chr4_2:74565668-74565687 Msa0622200:intron 35.0%
ATCATAAACATCCGGAACAA+AGG + chr4_2:74565682-74565701 None:intergenic 35.0%
TACGTTGCTAACATATGTAC+AGG - chr4_2:74565902-74565921 Msa0622200:five_prime_UTR 35.0%
ACGTTGCTAACATATGTACA+GGG - chr4_2:74565903-74565922 Msa0622200:five_prime_UTR 35.0%
! GTACTGACATGAGGAAAATG+CGG + chr4_2:74562450-74562469 None:intergenic 40.0%
CTTTCTCATTTCGAATCTCG+CGG + chr4_2:74562764-74562783 None:intergenic 40.0%
GCTTGTCCAAACTTGACAAA+AGG + chr4_2:74562795-74562814 None:intergenic 40.0%
TTTGTCAAGTTTGGACAAGC+TGG - chr4_2:74562795-74562814 Msa0622200:three_prime_UTR 40.0%
GTTGAGAGTTGAGTATGAGT+TGG - chr4_2:74563036-74563055 Msa0622200:exon 40.0%
!! GCTGTTTTCATAAGCTAGCT+TGG + chr4_2:74563235-74563254 None:intergenic 40.0%
GACATCTACTAAGTCCTGTT+TGG + chr4_2:74563376-74563395 None:intergenic 40.0%
GATACCGCAAGATATCAACA+GGG - chr4_2:74563584-74563603 Msa0622200:CDS 40.0%
AAGATATCAACAGGGATGCA+TGG - chr4_2:74563592-74563611 Msa0622200:CDS 40.0%
!!! TGGTTTTGTGAAGACTGACA+CGG - chr4_2:74563644-74563663 Msa0622200:CDS 40.0%
ATCCATGAAGCAAGCAAACA+AGG + chr4_2:74563697-74563716 None:intergenic 40.0%
CCGTTGCATATTAGATACTC+AGG - chr4_2:74563835-74563854 Msa0622200:CDS 40.0%
TGCATATTAGATACTCAGGG+AGG - chr4_2:74563839-74563858 Msa0622200:CDS 40.0%
TGGAAGAGAATGTAGAAGAG+AGG - chr4_2:74563894-74563913 Msa0622200:CDS 40.0%
GGAAGAGAATGTAGAAGAGA+GGG - chr4_2:74563895-74563914 Msa0622200:CDS 40.0%
GGACGACTCAATATATTTGG+GGG - chr4_2:74563947-74563966 Msa0622200:intron 40.0%
CAATATATTTGGGGGCAATG+AGG - chr4_2:74563955-74563974 Msa0622200:intron 40.0%
ATCAATTGGAGACACAGATG+TGG - chr4_2:74564099-74564118 Msa0622200:CDS 40.0%
TCAATTGGAGACACAGATGT+GGG - chr4_2:74564100-74564119 Msa0622200:CDS 40.0%
TTAAGCAAGTGAAAGTGAGC+CGG - chr4_2:74564149-74564168 Msa0622200:intron 40.0%
AGGCTTATTATAGCCTCTGA+TGG - chr4_2:74564290-74564309 Msa0622200:CDS 40.0%
TCTAGATCTTAGAGCTTCCT+GGG + chr4_2:74564487-74564506 None:intergenic 40.0%
ATGCTAACCACACTTCTCTT+TGG - chr4_2:74564597-74564616 Msa0622200:CDS 40.0%
!! TGTGGAAGAGCTTTTTGAAG+AGG - chr4_2:74564677-74564696 Msa0622200:intron 40.0%
!! GTGGAAGAGCTTTTTGAAGA+GGG - chr4_2:74564678-74564697 Msa0622200:intron 40.0%
! ATAGAAAGGTATGGATGGCA+TGG - chr4_2:74564714-74564733 Msa0622200:intron 40.0%
! TTAAAACTGCAGGCTTGGTA+AGG - chr4_2:74564907-74564926 Msa0622200:intron 40.0%
GACAGTTTGTGCAGAGAAAT+GGG + chr4_2:74565060-74565079 None:intergenic 40.0%
CATTTCTCTGCACAAACTGT+CGG - chr4_2:74565059-74565078 Msa0622200:intron 40.0%
TCGGAACAAAAAAGATGCCA+TGG - chr4_2:74565078-74565097 Msa0622200:intron 40.0%
GATTACTATGCTGTAACGGT+AGG + chr4_2:74565124-74565143 None:intergenic 40.0%
AAATCAAGCATGCTCACTGT+CGG + chr4_2:74565190-74565209 None:intergenic 40.0%
!! ATTTGATTCTGGCTTGTGCT+CGG - chr4_2:74565296-74565315 Msa0622200:CDS 40.0%
ACTGACTGATAGGACAAACA+TGG - chr4_2:74565326-74565345 Msa0622200:CDS 40.0%
! AACAATTTTGTGTTGGGGGT+GGG + chr4_2:74565520-74565539 None:intergenic 40.0%
GTTACTCATTGTCGTCAAGA+AGG - chr4_2:74565577-74565596 Msa0622200:intron 40.0%
AATGGCACAGCGAAAAATCT+GGG + chr4_2:74565650-74565669 None:intergenic 40.0%
CGTTGCTAACATATGTACAG+GGG - chr4_2:74565904-74565923 Msa0622200:five_prime_UTR 40.0%
CGGAGGATGAGATTGAGAAT+GGG + chr4_2:74562393-74562412 None:intergenic 45.0%
ACGGAGGATGAGATTGAGAA+TGG + chr4_2:74562394-74562413 None:intergenic 45.0%
TCATCCTCCGTTTCTACTCT+AGG - chr4_2:74562403-74562422 Msa0622200:three_prime_UTR 45.0%
CATCCTCCGTTTCTACTCTA+GGG - chr4_2:74562404-74562423 Msa0622200:three_prime_UTR 45.0%
AAACCCTAGAGTAGAAACGG+AGG + chr4_2:74562410-74562429 None:intergenic 45.0%
ATCAAAGTGGCCAATGGAAC+TGG + chr4_2:74562738-74562757 None:intergenic 45.0%
! GTTCCATTGGCCACTTTGAT+TGG - chr4_2:74562738-74562757 Msa0622200:three_prime_UTR 45.0%
CAAGTTTGGACAAGCTGGAT+TGG - chr4_2:74562800-74562819 Msa0622200:three_prime_UTR 45.0%
!! CAGATTTTTGACGGGCACAA+CGG - chr4_2:74563507-74563526 Msa0622200:CDS 45.0%
CGATACCGCAAGATATCAAC+AGG - chr4_2:74563583-74563602 Msa0622200:CDS 45.0%
GCATCCCTGTTGATATCTTG+CGG + chr4_2:74563591-74563610 None:intergenic 45.0%
TGACACGGAGTTTCAGAAGA+AGG - chr4_2:74563659-74563678 Msa0622200:CDS 45.0%
GACACGGAGTTTCAGAAGAA+GGG - chr4_2:74563660-74563679 Msa0622200:CDS 45.0%
!! AGCCTTGTTTGCTTGCTTCA+TGG - chr4_2:74563692-74563711 Msa0622200:intron 45.0%
TCATACACAGGGGAAACTTC+TGG - chr4_2:74563749-74563768 Msa0622200:intron 45.0%
ACTGTCACTGTTGCATCTGT+TGG - chr4_2:74563806-74563825 Msa0622200:CDS 45.0%
CTGTCACTGTTGCATCTGTT+GGG - chr4_2:74563807-74563826 Msa0622200:CDS 45.0%
TGTCACTGTTGCATCTGTTG+GGG - chr4_2:74563808-74563827 Msa0622200:CDS 45.0%
CCAGTCTATGATCAACTGTC+AGG + chr4_2:74563877-74563896 None:intergenic 45.0%
CCTGACAGTTGATCATAGAC+TGG - chr4_2:74563874-74563893 Msa0622200:CDS 45.0%
TCTAGATAGGCACAATCCAC+CGG + chr4_2:74564080-74564099 None:intergenic 45.0%
CAATTGGAGACACAGATGTG+GGG - chr4_2:74564101-74564120 Msa0622200:CDS 45.0%
AATTGGAGACACAGATGTGG+GGG - chr4_2:74564102-74564121 Msa0622200:CDS 45.0%
! TTTCCTCAGCTTTCAAGTGC+TGG - chr4_2:74564263-74564282 Msa0622200:CDS 45.0%
AGTGTCCCAAATACCATCAG+AGG + chr4_2:74564306-74564325 None:intergenic 45.0%
CTCTAGATCTTAGAGCTTCC+TGG + chr4_2:74564488-74564507 None:intergenic 45.0%
!! CAGGAAGCTCTAAGATCTAG+AGG - chr4_2:74564486-74564505 Msa0622200:intron 45.0%
! TCTAAGATCTAGAGGCCTGA+AGG - chr4_2:74564494-74564513 Msa0622200:intron 45.0%
AAGTAGGTGGTAATACAGGG+TGG + chr4_2:74564560-74564579 None:intergenic 45.0%
!! AAGCTTGCTAGTGGCTTTGT+TGG + chr4_2:74564643-74564662 None:intergenic 45.0%
!! AACTGCAGAAAGCTTGCTAG+TGG + chr4_2:74564652-74564671 None:intergenic 45.0%
ACTAGCAAGCTTTCTGCAGT+TGG - chr4_2:74564651-74564670 Msa0622200:CDS 45.0%
TCACCGATAGACCATTACCA+GGG + chr4_2:74564994-74565013 None:intergenic 45.0%
TTCACCGATAGACCATTACC+AGG + chr4_2:74564995-74565014 None:intergenic 45.0%
AATGGTCTATCGGTGAACTC+TGG - chr4_2:74564998-74565017 Msa0622200:intron 45.0%
TTTCTCCAGCATCTAAGCCA+TGG - chr4_2:74565029-74565048 Msa0622200:intron 45.0%
TTCTCCAGCATCTAAGCCAT+GGG - chr4_2:74565030-74565049 Msa0622200:intron 45.0%
CGACAGTTTGTGCAGAGAAA+TGG + chr4_2:74565061-74565080 None:intergenic 45.0%
AAGATGCCATGGAAGGAAAG+AGG - chr4_2:74565089-74565108 Msa0622200:intron 45.0%
CATGGTGTCTAGTAGATAGG+TGG - chr4_2:74565344-74565363 Msa0622200:CDS 45.0%
! CTCCCATTTGAGACCTTCAA+TGG - chr4_2:74565421-74565440 Msa0622200:CDS 45.0%
! ACAATTTTGTGTTGGGGGTG+GGG + chr4_2:74565519-74565538 None:intergenic 45.0%
! GAACAATTTTGTGTTGGGGG+TGG + chr4_2:74565521-74565540 None:intergenic 45.0%
!!! TCGTTTTGGTGTTAGTGTGC+TGG + chr4_2:74565611-74565630 None:intergenic 45.0%
GAATGGCACAGCGAAAAATC+TGG + chr4_2:74565651-74565670 None:intergenic 45.0%
TGCTAACATATGTACAGGGG+CGG - chr4_2:74565907-74565926 Msa0622200:five_prime_UTR 45.0%
!! TATGTACAGGGGCGGATTAT+AGG - chr4_2:74565915-74565934 Msa0622200:five_prime_UTR 45.0%
GAAGCCATCACCAGTTCCAT+TGG - chr4_2:74562725-74562744 Msa0622200:three_prime_UTR 50.0%
AATCTCGCGGCCAATCAAAG+TGG + chr4_2:74562751-74562770 None:intergenic 50.0%
!! CAAGCTGGATTGGCCAAGAA+AGG - chr4_2:74562810-74562829 Msa0622200:three_prime_UTR 50.0%
AAGACGGAAAACGCGGTTGA+TGG + chr4_2:74562885-74562904 None:intergenic 50.0%
! AACCGCGTTTTCCGTCTTTG+CGG - chr4_2:74562887-74562906 Msa0622200:three_prime_UTR 50.0%
TACCGCAAAGACGGAAAACG+CGG + chr4_2:74562892-74562911 None:intergenic 50.0%
AACAACTAGAGCGCGAGGAA+GGG + chr4_2:74563625-74563644 None:intergenic 50.0%
AAACCAACAACTAGAGCGCG+AGG + chr4_2:74563630-74563649 None:intergenic 50.0%
CTAGATAGGCACAATCCACC+GGG + chr4_2:74564079-74564098 None:intergenic 50.0%
!! AGCTTTCAAGTGCTGGTGGA+AGG - chr4_2:74564270-74564289 Msa0622200:CDS 50.0%
ATATGGCCGCCATGTCATGT+CGG - chr4_2:74564336-74564355 Msa0622200:CDS 50.0%
TGCTGCAAAGCTGGTGGTTA+AGG - chr4_2:74564376-74564395 Msa0622200:CDS 50.0%
GGCAGGTTGTATCATCCTTC+AGG + chr4_2:74564512-74564531 None:intergenic 50.0%
GGTAATACAGGGTGGTCAGA+AGG + chr4_2:74564552-74564571 None:intergenic 50.0%
!! GCTTTCTGCAGTTGGTGTTG+TGG - chr4_2:74564659-74564678 Msa0622200:CDS 50.0%
CCACTTGGCAAATAGCACAG+CGG + chr4_2:74564964-74564983 None:intergenic 50.0%
!! ACCCCCTGGTAATGGTCTAT+CGG - chr4_2:74564988-74565007 Msa0622200:intron 50.0%
ACCGATAGACCATTACCAGG+GGG + chr4_2:74564992-74565011 None:intergenic 50.0%
CACCGATAGACCATTACCAG+GGG + chr4_2:74564993-74565012 None:intergenic 50.0%
CTCTAACGTCTCCGAAGATC+AGG - chr4_2:74565472-74565491 Msa0622200:CDS 50.0%
! AATTTTGTGTTGGGGGTGGG+GGG + chr4_2:74565517-74565536 None:intergenic 50.0%
! CAATTTTGTGTTGGGGGTGG+GGG + chr4_2:74565518-74565537 None:intergenic 50.0%
!! TTTGGTGTTAGTGTGCTGGC+AGG + chr4_2:74565607-74565626 None:intergenic 50.0%
GTGGCCAATGGAACTGGTGA+TGG + chr4_2:74562732-74562751 None:intergenic 55.0%
CGGCCAATCAAAGTGGCCAA+TGG + chr4_2:74562744-74562763 None:intergenic 55.0%
ACAGATTGCCACAGGGTTCC+CGG - chr4_2:74562855-74562874 Msa0622200:three_prime_UTR 55.0%
!! AAACGCGGTTGATGGATCCC+CGG + chr4_2:74562877-74562896 None:intergenic 55.0%
CAACAGGGATGCATGGCTAC+AGG - chr4_2:74563599-74563618 Msa0622200:CDS 55.0%
CAACAACTAGAGCGCGAGGA+AGG + chr4_2:74563626-74563645 None:intergenic 55.0%
CTTCCTCGCGCTCTAGTTGT+TGG - chr4_2:74563624-74563643 Msa0622200:CDS 55.0%
CCACCAGCACTTGAAAGCTG+AGG + chr4_2:74564269-74564288 None:intergenic 55.0%
!! CCTCAGCTTTCAAGTGCTGG+TGG - chr4_2:74564266-74564285 Msa0622200:CDS 55.0%
TATGGCCGCCATGTCATGTC+GGG - chr4_2:74564337-74564356 Msa0622200:CDS 55.0%
TAGACCCCGACATGACATGG+CGG + chr4_2:74564345-74564364 None:intergenic 55.0%
AGGTAGACCCCGACATGACA+TGG + chr4_2:74564348-74564367 None:intergenic 55.0%
!! CCGCTGTGCTATTTGCCAAG+TGG - chr4_2:74564961-74564980 Msa0622200:intron 55.0%
! TACCAGGGGGTTGATCCACT+TGG + chr4_2:74564979-74564998 None:intergenic 55.0%
GTGGATCAACCCCCTGGTAA+TGG - chr4_2:74564980-74564999 Msa0622200:intron 55.0%
CCTTCCCATGGCTTAGATGC+TGG + chr4_2:74565037-74565056 None:intergenic 55.0%
CCAGCATCTAAGCCATGGGA+AGG - chr4_2:74565034-74565053 Msa0622200:intron 55.0%
CAGAGAAATGGGCCTTCCCA+TGG + chr4_2:74565049-74565068 None:intergenic 55.0%
GCTTGGCCTCTTTCCTTCCA+TGG + chr4_2:74565098-74565117 None:intergenic 55.0%
GCTGTAACGGTAGGTCTGCT+TGG + chr4_2:74565115-74565134 None:intergenic 55.0%
CGGCTGTTGGACTGACTGAT+AGG - chr4_2:74565316-74565335 Msa0622200:CDS 55.0%
! GTGTTAGTGTGCTGGCAGGT+GGG + chr4_2:74565603-74565622 None:intergenic 55.0%
CAGATTGCCACAGGGTTCCC+GGG - chr4_2:74562856-74562875 Msa0622200:three_prime_UTR 60.0%
AGATTGCCACAGGGTTCCCG+GGG - chr4_2:74562857-74562876 Msa0622200:three_prime_UTR 60.0%
!! AACGCGGTTGATGGATCCCC+GGG + chr4_2:74562876-74562895 None:intergenic 60.0%
! AGGGAGCGTGTTACTGCCAG+TGG - chr4_2:74563914-74563933 Msa0622200:intron 60.0%
! GAGCGTGTTACTGCCAGTGG+TGG - chr4_2:74563917-74563936 Msa0622200:intron 60.0%
! ACTGCCAGTGGTGGCGAAGT+AGG - chr4_2:74563926-74563945 Msa0622200:intron 60.0%
TCGTCCTACTTCGCCACCAC+TGG + chr4_2:74563933-74563952 None:intergenic 60.0%
AGGTAGGTCCTCTTCGCTGC+TGG - chr4_2:74564053-74564072 Msa0622200:CDS 60.0%
ATGGCCGCCATGTCATGTCG+GGG - chr4_2:74564338-74564357 Msa0622200:CDS 60.0%
GTCATGTCGGGGTCTACCTG+CGG - chr4_2:74564349-74564368 Msa0622200:CDS 60.0%
AGCTTTGCAGCAAGCTCCGC+AGG + chr4_2:74564368-74564387 None:intergenic 60.0%
!! TGCGGAGCTTGCTGCAAAGC+TGG - chr4_2:74564367-74564386 Msa0622200:CDS 60.0%
!! GGAGCTTGCTGCAAAGCTGG+TGG - chr4_2:74564370-74564389 Msa0622200:CDS 60.0%
TGCCAAGTGGATCAACCCCC+TGG - chr4_2:74564974-74564993 Msa0622200:intron 60.0%
! TCTGGCTTGTGCTCGGCTGT+TGG - chr4_2:74565303-74565322 Msa0622200:CDS 60.0%
! GGTGTTAGTGTGCTGGCAGG+TGG + chr4_2:74565604-74565623 None:intergenic 60.0%
ATGGATCCCCGGGAACCCTG+TGG + chr4_2:74562866-74562885 None:intergenic 65.0%
GGTCCTCTTCGCTGCTGGCC+CGG - chr4_2:74564058-74564077 Msa0622200:CDS 70.0%
CCACCGGGCCAGCAGCGAAG+AGG + chr4_2:74564064-74564083 None:intergenic 75.0%
CCTCTTCGCTGCTGGCCCGG+TGG - chr4_2:74564061-74564080 Msa0622200:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 74562250 74565943 74562250 ID=Msa0622200;Name=Msa0622200
chr4_2 mRNA 74562250 74565943 74562250 ID=Msa0622200-mRNA-1;Parent=Msa0622200;Name=Msa0622200-mRNA-1;_AED=0.04;_eAED=0.04;_QI=257|1|1|1|0.85|0.75|8|805|428
chr4_2 exon 74562250 74563274 74562250 ID=Msa0622200-mRNA-1:exon:22516;Parent=Msa0622200-mRNA-1
chr4_2 exon 74563472 74563704 74563472 ID=Msa0622200-mRNA-1:exon:22515;Parent=Msa0622200-mRNA-1
chr4_2 exon 74563796 74563921 74563796 ID=Msa0622200-mRNA-1:exon:22514;Parent=Msa0622200-mRNA-1
chr4_2 exon 74564031 74564138 74564031 ID=Msa0622200-mRNA-1:exon:22513;Parent=Msa0622200-mRNA-1
chr4_2 exon 74564217 74564434 74564217 ID=Msa0622200-mRNA-1:exon:22512;Parent=Msa0622200-mRNA-1
chr4_2 exon 74564512 74564683 74564512 ID=Msa0622200-mRNA-1:exon:22511;Parent=Msa0622200-mRNA-1
chr4_2 exon 74565285 74565539 74565285 ID=Msa0622200-mRNA-1:exon:22510;Parent=Msa0622200-mRNA-1
chr4_2 exon 74565732 74565943 74565732 ID=Msa0622200-mRNA-1:exon:22509;Parent=Msa0622200-mRNA-1
chr4_2 five_prime_UTR 74565732 74565943 74565732 ID=Msa0622200-mRNA-1:five_prime_utr;Parent=Msa0622200-mRNA-1
chr4_2 five_prime_UTR 74565495 74565539 74565495 ID=Msa0622200-mRNA-1:five_prime_utr;Parent=Msa0622200-mRNA-1
chr4_2 CDS 74565285 74565494 74565285 ID=Msa0622200-mRNA-1:cds;Parent=Msa0622200-mRNA-1
chr4_2 CDS 74564512 74564683 74564512 ID=Msa0622200-mRNA-1:cds;Parent=Msa0622200-mRNA-1
chr4_2 CDS 74564217 74564434 74564217 ID=Msa0622200-mRNA-1:cds;Parent=Msa0622200-mRNA-1
chr4_2 CDS 74564031 74564138 74564031 ID=Msa0622200-mRNA-1:cds;Parent=Msa0622200-mRNA-1
chr4_2 CDS 74563796 74563921 74563796 ID=Msa0622200-mRNA-1:cds;Parent=Msa0622200-mRNA-1
chr4_2 CDS 74563472 74563704 74563472 ID=Msa0622200-mRNA-1:cds;Parent=Msa0622200-mRNA-1
chr4_2 CDS 74563055 74563274 74563055 ID=Msa0622200-mRNA-1:cds;Parent=Msa0622200-mRNA-1
chr4_2 three_prime_UTR 74562250 74563054 74562250 ID=Msa0622200-mRNA-1:three_prime_utr;Parent=Msa0622200-mRNA-1
Gene Sequence

>Msa0622200

ATGAGTAAACGTGAATTGTCAAGGATGAAGCCATCACCAGTTCCATTGGCCACTTTGATTGGCCGCGAGATTCGAAATGAGAAAGTTGAAAAACCTTTTGTCAAGTTTGGACAAGCTGGATTGGCCAAGAAAGGAGAAGATTACTTTTTAATCAAAACAGATTGCCACAGGGTTCCCGGGGATCCATCAACCGCGTTTTCCGTCTTTGCGATTTTTGACGGGCACAACGGTATATCAGCTGCTATTTATACAAAAGAAAACTTGCTTAATAATGTTTTGAGTGCGATACCGCAAGATATCAACAGGGATGCATGGCTACAGGCCCTTCCTCGCGCTCTAGTTGTTGGTTTTGTGAAGACTGACACGGAGTTTCAGAAGAAGGGGGAAACTTCTGGAACAACAGCTACATTTGTTATAGTTGATGGATGGACTGTCACTGTTGCATCTGTTGGGGATTCCCGTTGCATATTAGATACTCAGGGAGGTGTAGTTTCTCTCCTGACAGTTGATCATAGACTGGAAGAGAATGTAGAAGAGAGGGAGCGTGTTACTGCCAGTGGTGGCGAAGTAGGACGACTCAATATATTTGGGGGCAATGAGGTAGGTCCTCTTCGCTGCTGGCCCGGTGGATTGTGCCTATCTAGATCAATTGGAGACACAGATGTGGGGGAATATATCGTACCAATACCACATGTTAAGCAAGTGAAACTTTCAAGTGCTGGTGGAAGGCTTATTATAGCCTCTGATGGTATTTGGGACACTTTATCTAATGATATGGCCGCCATGTCATGTCGGGGTCTACCTGCGGAGCTTGCTGCAAAGCTGGTGGTTAAGGAAGCTCTAAGATCTAGAGGCCTGAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCTGACCACCCTGTATTACCACCTACTTCAAAAAAGAAGCATAATATGCTAACCACACTTCTCTTTGGAAAGAAATCTGAGAACTCTACCAACAAAGCCACTAGCAAGCTTTCTGCAGTTGGTGTTGTGGAAGAGCTTTTTGAAGAGGGTTCTGCAATGCTTATAGAAAGGCTTGGTAAGGATTTTCCATTTGATAAGAATTCTGAGATTTTCCGCTGTGCTATTTGCCAAGTGGATCAACCCCCTGGTAATGGTCTATCGGTGAACTCTGGACCTTTCTTTTCTCCAGCATCTAAGCCATGGGAAGGCCCATTTCTCTGCACAAACTGTCGGAACAAAAAAGATGCCATGGAAGGAAAGAGGCCAAGCAGACCTACCGTTACAGCATAG
Protein sequence

>Msa0622200

MSKRELSRMKPSPVPLATLIGREIRNEKVEKPFVKFGQAGLAKKGEDYFLIKTDCHRVPGDPSTAFSVFAIFDGHNGISAAIYTKENLLNNVLSAIPQDINRDAWLQALPRALVVGFVKTDTEFQKKGETSGTTATFVIVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNIFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSSAGGRLIIASDGIWDTLSNDMAAMSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPPTSKKKHNMLTTLLFGKKSENSTNKATSKLSAVGVVEELFEEGSAMLIERLGKDFPFDKNSEIFRCAICQVDQPPGNGLSVNSGPFFSPASKPWEGPFLCTNCRNKKDAMEGKRPSRPTVTA*