AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0635110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0635110 MtrunA17_Chr3g0081941 84.211 38 6 0 90 127 929 966 2.26e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 250 sgRNAs with CRISPR-Local

Find 566 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAAGTTTGTGGAAGTTTC+TGG 0.149680 4_3:-23288270 None:intergenic
CATGGTGAGGCGGTTAAATT+AGG 0.151326 4_3:+23288880 Msa0635110:five_prime_UTR
CATTTCTCGGTACAAGTTTA+AGG 0.180730 4_3:-23289979 None:intergenic
GCTACATTTACTGCTTTAAT+TGG 0.181160 4_3:+23288511 Msa0635110:five_prime_UTR
AATGATTTGGGCTAATTTAT+TGG 0.190068 4_3:+23290538 Msa0635110:five_prime_UTR
GCGTGGAATGTTATGATTTC+TGG 0.199941 4_3:+23288712 Msa0635110:five_prime_UTR
GGGTGGGGTTTGTTGGTTCA+TGG 0.215430 4_3:+23288862 Msa0635110:five_prime_UTR
CTCTTTGTTGGGTATGTATA+TGG 0.218648 4_3:+23289839 Msa0635110:five_prime_UTR
TTGAATGCGTGTGTGAATTT+AGG 0.223356 4_3:+23288631 Msa0635110:five_prime_UTR
GTTGCTGGTTTGGGTGATTT+GGG 0.251260 4_3:+23288841 Msa0635110:five_prime_UTR
CATGGTTGAGTTTGATGAAT+TGG 0.265542 4_3:-23288132 None:intergenic
GGTTGCTGGTTTGGGTGATT+TGG 0.274816 4_3:+23288840 Msa0635110:five_prime_UTR
AGTGAATGAGTTTGGGAAAT+TGG 0.277445 4_3:-23288162 None:intergenic
CAGTGCTTGTGGAAATATTA+AGG 0.281269 4_3:+23289440 Msa0635110:five_prime_UTR
CTGGTTTGGGTGATTTGGGG+TGG 0.282725 4_3:+23288845 Msa0635110:five_prime_UTR
TCTGCATGAGATGCAGATAT+TGG 0.297034 4_3:+23289680 Msa0635110:five_prime_UTR
TCACCTTCAAAATCGATTCT+TGG 0.298139 4_3:-23287843 None:intergenic
AATTTATGAAATTTAATTAG+AGG 0.302289 4_3:+23295977 Msa0635110:three_prime_UTR
TGATTTGGGGTGGGGTTTGT+TGG 0.306510 4_3:+23288855 Msa0635110:five_prime_UTR
ACAACCATCTACAGTCAATT+TGG 0.307079 4_3:-23294403 None:intergenic
TCTTGGCTGAATGCCGTAAT+AGG 0.309811 4_3:-23290417 None:intergenic
AAGGAAGAAGACACTGTTCT+TGG 0.319749 4_3:-23287689 None:intergenic
TTTGAGCAACTAAATTTAAC+TGG 0.324205 4_3:-23290897 None:intergenic
TTATGTGGTAGCGAATTCTT+AGG 0.329408 4_3:+23289813 Msa0635110:five_prime_UTR
AGAATTCGCTACCACATAAA+AGG 0.335066 4_3:-23289809 None:intergenic
TACTCTGCATGCTTGTGTTC+AGG 0.337031 4_3:+23295318 Msa0635110:CDS
GGTTTGGGTGATTTGGGGTG+GGG 0.340292 4_3:+23288847 Msa0635110:five_prime_UTR
AGTTTGATGAATTGGGAAAT+TGG 0.341645 4_3:-23288124 None:intergenic
AACAACATGGTAACCTATTA+CGG 0.342294 4_3:+23290404 Msa0635110:five_prime_UTR
CCCTAAAAGTTGTTGAAAAT+CGG 0.342926 4_3:-23296016 None:intergenic
GGTATTGAAGTGAATGAGTT+TGG 0.346884 4_3:-23288170 None:intergenic
TTGAGTGCGGTTGCTGGTTT+GGG 0.347895 4_3:+23288832 Msa0635110:five_prime_UTR
ATGATTTGGGCTAATTTATT+GGG 0.350877 4_3:+23290539 Msa0635110:five_prime_UTR
TTTGAGTGCGGTTGCTGGTT+TGG 0.353107 4_3:+23288831 Msa0635110:five_prime_UTR
CTTGGAATTCAATGATTGTT+GGG 0.353163 4_3:+23290234 Msa0635110:five_prime_UTR
TGAATGCGTGTGTGAATTTA+GGG 0.355791 4_3:+23288632 Msa0635110:five_prime_UTR
TTGACCAAATTGACTGTAGA+TGG 0.358478 4_3:+23294399 Msa0635110:CDS
AACACCACAATCGGATGAAT+TGG 0.361494 4_3:-23293766 None:intergenic
TCATGGAATGCTATTCTTGT+TGG 0.362070 4_3:+23289318 Msa0635110:five_prime_UTR
CTCACTGCCTGTAGCCATAC+AGG 0.364916 4_3:+23290353 Msa0635110:five_prime_UTR
TCAATGAATGCTCTGATTGC+AGG 0.369509 4_3:+23289621 Msa0635110:five_prime_UTR
ATGATTTGCAGAGAAGGATT+TGG 0.369589 4_3:+23295250 Msa0635110:CDS
TATTATCAAGAGAAGGTTTA+CGG 0.370158 4_3:+23289191 Msa0635110:five_prime_UTR
CTGTGGACAGCTTTAATATC+TGG 0.370640 4_3:+23289927 Msa0635110:five_prime_UTR
ATTCTTAGGTACCTCTTTGT+TGG 0.380841 4_3:+23289827 Msa0635110:five_prime_UTR
TATTGTTGTCACGCATTTCT+CGG 0.383193 4_3:-23289992 None:intergenic
AGTTCATTGATTAATATGTA+TGG 0.385075 4_3:+23288928 Msa0635110:five_prime_UTR
TGGTTGTTTAAGTGATGTTA+TGG 0.387275 4_3:+23289050 Msa0635110:five_prime_UTR
TGGTTTGGGTGATTTGGGGT+GGG 0.387352 4_3:+23288846 Msa0635110:five_prime_UTR
AAAAGTGCTTTCAGCGTGTT+TGG 0.387785 4_3:-23287900 None:intergenic
TGGAACCCAATGCAATGATT+TGG 0.387811 4_3:+23290525 Msa0635110:five_prime_UTR
GTGACATCATCCGGTGAAAC+AGG 0.387816 4_3:-23290317 None:intergenic
GCTTGCATGGTTGATCTACT+TGG 0.388314 4_3:+23290452 Msa0635110:five_prime_UTR
TCAAGGGTAAAATAGACAAA+TGG 0.392049 4_3:+23287760 Msa0635110:five_prime_UTR
CCGGATGATGTCACATTCCT+TGG 0.392550 4_3:+23290326 Msa0635110:five_prime_UTR
TATAATATGCATGCTGGATC+AGG 0.393864 4_3:+23290659 Msa0635110:five_prime_UTR
CTGCATGAGATGCAGATATT+GGG 0.395313 4_3:+23289681 Msa0635110:five_prime_UTR
TTCTTAGGTACCTCTTTGTT+GGG 0.398542 4_3:+23289828 Msa0635110:five_prime_UTR
TGCTAAGGCTGGGGCTTTGA+AGG 0.401302 4_3:+23289251 Msa0635110:five_prime_UTR
CTGGGGTATTGCAGCTCTGA+TGG 0.402263 4_3:+23295904 Msa0635110:CDS
GAATTTGATCGATTTCTCAT+TGG 0.403602 4_3:+23295285 Msa0635110:CDS
CATCTAAGTCAAAACCAGTA+TGG 0.403720 4_3:-23290109 None:intergenic
AATATCGAGATAATATTTCA+TGG 0.404160 4_3:+23289301 Msa0635110:five_prime_UTR
CCATGGCCTTACAGTTAAGT+TGG 0.413190 4_3:+23289485 Msa0635110:five_prime_UTR
ATGGTTGAGTTTGATGAATT+GGG 0.413729 4_3:-23288131 None:intergenic
TTCTCGTGCGGCTGCATTAG+TGG 0.418206 4_3:+23287948 Msa0635110:five_prime_UTR
CATGGCCTTACAGTTAAGTT+GGG 0.419421 4_3:+23289486 Msa0635110:five_prime_UTR
CAATCAATGTCCAGAGGATA+CGG 0.421148 4_3:+23294340 Msa0635110:CDS
TGGTAAGAGAGGTTATTATA+AGG 0.423402 4_3:+23288738 Msa0635110:five_prime_UTR
CTGTTTCATCTTTGCTTGGA+CGG 0.424381 4_3:+23291136 Msa0635110:CDS
GTAACAAATGTTGCTTGGTC+TGG 0.430316 4_3:-23290020 None:intergenic
GTTATGTGGAATACAATTCT+TGG 0.432797 4_3:+23289012 Msa0635110:five_prime_UTR
GATTCTGTTTCATCTTTGCT+TGG 0.433874 4_3:+23291132 Msa0635110:CDS
AATGAGAGACAATAGATTGC+AGG 0.434157 4_3:+23290856 Msa0635110:five_prime_UTR
TGCTTCGAATTCTTAGATAT+CGG 0.434516 4_3:+23289150 Msa0635110:five_prime_UTR
CCATACAGGGTTGGTTTCTG+AGG 0.436268 4_3:+23290367 Msa0635110:five_prime_UTR
ATCTCTTTGCACAACACAAC+AGG 0.438010 4_3:+23292407 Msa0635110:CDS
ATCAATGAGGTGTAAGTTTG+TGG 0.438928 4_3:-23288280 None:intergenic
CTAGAGTACGTAAACTCATC+CGG 0.439078 4_3:-23289108 None:intergenic
GAAGTTTCTGGAATAAGTTT+TGG 0.440253 4_3:-23288258 None:intergenic
ATTTAGTTGCTCAAAACAAT+GGG 0.442146 4_3:+23290905 Msa0635110:exon
ATTAGCCCAAATCATTGCAT+TGG 0.444171 4_3:-23290531 None:intergenic
TTAGCCCAAATCATTGCATT+GGG 0.444691 4_3:-23290530 None:intergenic
AACAACTCCAACACCACAAT+CGG 0.445483 4_3:-23293775 None:intergenic
GGGATGAAGCTAAATCTCTA+AGG 0.447048 4_3:+23290687 Msa0635110:five_prime_UTR
CTCCCTCATAGATTGTTGTA+AGG 0.449932 4_3:+23289731 Msa0635110:five_prime_UTR
AATTCATCCGATTGTGGTGT+TGG 0.450566 4_3:+23293768 Msa0635110:CDS
AATATTTGGCAGAAAATTCA+AGG 0.453495 4_3:-23287708 None:intergenic
GACAATAGATTGCAGGAAGA+TGG 0.454111 4_3:+23290863 Msa0635110:five_prime_UTR
CGGCGGCGGTAAGTTGTTGT+TGG 0.460015 4_3:+23287873 Msa0635110:five_prime_UTR
TCAAAATGATTGCAGTGATC+AGG 0.460998 4_3:+23289956 Msa0635110:five_prime_UTR
GTGGATATGTATGCTAAGGC+TGG 0.461236 4_3:+23289240 Msa0635110:five_prime_UTR
CCTCAGAAACCAACCCTGTA+TGG 0.463275 4_3:-23290367 None:intergenic
TCTTGGAATTCAATGATTGT+TGG 0.465156 4_3:+23290233 Msa0635110:five_prime_UTR
GACTCTATCACCTGTTTCAC+CGG 0.465819 4_3:+23290307 Msa0635110:five_prime_UTR
CAGTTCCACTTGCTCGGCGG+CGG 0.466985 4_3:-23287983 None:intergenic
CATATCTACAAGGGCACTGC+TGG 0.469103 4_3:-23290138 None:intergenic
ATGGTGAGGCGGTTAAATTA+GGG 0.470679 4_3:+23288881 Msa0635110:five_prime_UTR
TTAAAAGGTATGTGAAAGGA+AGG 0.470697 4_3:+23287729 Msa0635110:five_prime_UTR
CAAGGGTAAAATAGACAAAT+GGG 0.470781 4_3:+23287761 Msa0635110:five_prime_UTR
TCCACAAGCACTGAGAATAC+TGG 0.470831 4_3:-23289430 None:intergenic
GGAACCCAATGCAATGATTT+GGG 0.470963 4_3:+23290526 Msa0635110:five_prime_UTR
TTCTGTTGTTATTTCTGAGA+GGG 0.473184 4_3:+23295927 Msa0635110:CDS
TTGGCGGTTATGTTCGTGTT+GGG 0.473590 4_3:+23288530 Msa0635110:five_prime_UTR
AAACTCGAAAACCTCGAGTT+CGG 0.474154 4_3:+23288337 Msa0635110:five_prime_UTR
TTGGGTGCTTGCAGTATACA+TGG 0.475510 4_3:+23290557 Msa0635110:five_prime_UTR
TGTTCACAGTTCCACTTGCT+CGG 0.475763 4_3:-23287989 None:intergenic
GGAGTTGTTCTCTGAGATGA+TGG 0.476653 4_3:+23289071 Msa0635110:five_prime_UTR
TGACAAGAAAGGAGCTGAGA+AGG 0.478770 4_3:-23292329 None:intergenic
TAAGAGAGCTTCCAGCGAAA+AGG 0.483635 4_3:-23289521 None:intergenic
TGTTGTATTCAGTTGGATGA+AGG 0.484156 4_3:-23288032 None:intergenic
CCAAGGAATGTGACATCATC+CGG 0.487112 4_3:-23290326 None:intergenic
AATTTAGTTGCTCAAAACAA+TGG 0.490294 4_3:+23290904 Msa0635110:exon
ACATTTACTGCTTTAATTGG+CGG 0.490678 4_3:+23288514 Msa0635110:five_prime_UTR
GTTGGTCATCCCGTATCCTC+TGG 0.490740 4_3:-23294350 None:intergenic
TGTCTCTCATTAGTGCTGCC+AGG 0.491815 4_3:-23290844 None:intergenic
AGCAAGAATGAGCTAAAAGT+TGG 0.491828 4_3:-23294368 None:intergenic
GAATCGACATGGCGTAGTAC+CGG 0.493484 4_3:+23289392 Msa0635110:five_prime_UTR
GCCAGTATTCTCAGTGCTTG+TGG 0.496199 4_3:+23289429 Msa0635110:five_prime_UTR
TGCATCCCTAAAATCACCTT+AGG 0.496387 4_3:-23289759 None:intergenic
ATATTATAAAGTTGTACATA+TGG 0.497698 4_3:-23290644 None:intergenic
ATTGGCGGTTATGTTCGTGT+TGG 0.501806 4_3:+23288529 Msa0635110:five_prime_UTR
CTTGGAGTTTACGCACAGAA+TGG 0.503857 4_3:+23289030 Msa0635110:five_prime_UTR
TTATGCGGAAAGGGCATTGA+AGG 0.504129 4_3:+23290271 Msa0635110:five_prime_UTR
AAAGGAAGGGATAAGTTTCA+AGG 0.504595 4_3:+23287743 Msa0635110:five_prime_UTR
AACTACAATCCAGCTACACC+CGG 0.505669 4_3:-23290744 None:intergenic
GAAGAAGACACTGTTCTTGG+AGG 0.506972 4_3:-23287686 None:intergenic
GTGTGTGAATTTAGGGAAGT+TGG 0.507420 4_3:+23288639 Msa0635110:five_prime_UTR
GGGTTTGTTGGTTCATGGTG+AGG 0.507458 4_3:+23288867 Msa0635110:five_prime_UTR
GAGAGGTTATTATAAGGAGG+CGG 0.508222 4_3:+23288744 Msa0635110:five_prime_UTR
AATATTAAGGTACTAGAAGC+AGG 0.508237 4_3:+23289453 Msa0635110:five_prime_UTR
ACTCCTTACAACAATCTATG+AGG 0.508399 4_3:-23289734 None:intergenic
GTTCATTGATTAATATGTAT+GGG 0.514781 4_3:+23288929 Msa0635110:five_prime_UTR
TGCATGCTGGATCAGGACAT+TGG 0.515554 4_3:+23290666 Msa0635110:five_prime_UTR
CTGGCCATGCATACCTCGTC+CGG 0.515711 4_3:-23289411 None:intergenic
TCCGCATTTCATCAAACAGT+TGG 0.515895 4_3:-23288570 None:intergenic
CAAGCGTAGTGATCTACTCT+TGG 0.517448 4_3:-23290434 None:intergenic
GTATTGAAGTGAATGAGTTT+GGG 0.518438 4_3:-23288169 None:intergenic
CAACTTTATAATATGCATGC+TGG 0.519196 4_3:+23290653 Msa0635110:five_prime_UTR
CATTGAGACCACACTCCACT+CGG 0.519365 4_3:-23289604 None:intergenic
GAGCTGCAATACCCCAGAAA+AGG 0.521660 4_3:-23295898 None:intergenic
CTAAACCCAACTTAACTGTA+AGG 0.523282 4_3:-23289491 None:intergenic
GTGTGATTTGTTTGATGAGA+TGG 0.524276 4_3:+23288669 Msa0635110:five_prime_UTR
GGTGTGAGTATGTGGAAATG+AGG 0.527669 4_3:-23288237 None:intergenic
GAATCGATTTCAAGAAGCTA+GGG 0.527902 4_3:+23287808 Msa0635110:five_prime_UTR
AAAGAGATGACGGCAGAAAA+CGG 0.529533 4_3:-23292392 None:intergenic
TTCACATGCTTTGAAGCACC+TGG 0.530862 4_3:+23290826 Msa0635110:five_prime_UTR
GATTTGTTTGATGAGATGGA+TGG 0.531104 4_3:+23288673 Msa0635110:five_prime_UTR
GTTTGAGTCGAGTGTTTATG+TGG 0.531232 4_3:+23288903 Msa0635110:five_prime_UTR
CAGGAACATTATGAACAGAT+TGG 0.531891 4_3:+23295875 Msa0635110:intron
CGAGAAAAGAATGTTCGCTT+CGG 0.533131 4_3:-23289877 None:intergenic
AGTTACATGATTTGCAGAGA+AGG 0.533514 4_3:+23295244 Msa0635110:CDS
GCATGCTGGATCAGGACATT+GGG 0.534600 4_3:+23290667 Msa0635110:five_prime_UTR
GACGGCAGAAAACGGTTTCA+CGG 0.534629 4_3:-23292384 None:intergenic
TTGACATGTATTCCAAGTGT+GGG 0.535156 4_3:+23289544 Msa0635110:five_prime_UTR
TTCTCTGAGATGATGGGGTG+TGG 0.535284 4_3:+23289078 Msa0635110:five_prime_UTR
GCATCTATGTTGTATTCAGT+TGG 0.535572 4_3:-23288039 None:intergenic
TAAGAGAGGTTATTATAAGG+AGG 0.535799 4_3:+23288741 Msa0635110:five_prime_UTR
GCAGGAAGATGGAATTTCAC+AGG 0.535985 4_3:+23290874 Msa0635110:five_prime_UTR
GAGGGAATTTGAATTTGAGT+TGG 0.536327 4_3:-23288218 None:intergenic
AAAATCCGCCGCCGAGCAAG+TGG 0.536953 4_3:+23287978 Msa0635110:five_prime_UTR
TGAATTTGAGTTGGTTGCAA+CGG 0.541185 4_3:-23288209 None:intergenic
AACCAACCCTGTATGGCTAC+AGG 0.544294 4_3:-23290360 None:intergenic
TGCCTGTAGCCATACAGGGT+TGG 0.546208 4_3:+23290358 Msa0635110:five_prime_UTR
TTGCTGGTTTGGGTGATTTG+GGG 0.546695 4_3:+23288842 Msa0635110:five_prime_UTR
ACGGCGACAATGAGAGTTGA+CGG 0.548998 4_3:-23292365 None:intergenic
TGGATATGTATGCTAAGGCT+GGG 0.549324 4_3:+23289241 Msa0635110:five_prime_UTR
GACTGTAGATGGTTGTGAAA+GGG 0.551452 4_3:+23294410 Msa0635110:CDS
CATACAGGGTTGGTTTCTGA+GGG 0.551880 4_3:+23290368 Msa0635110:five_prime_UTR
GTATATGGATTCACAAATGT+TGG 0.552149 4_3:+23289854 Msa0635110:five_prime_UTR
AGAATCGATTTCAAGAAGCT+AGG 0.553656 4_3:+23287807 Msa0635110:five_prime_UTR
TGTTCCAATTCATCCGATTG+TGG 0.554980 4_3:+23293762 Msa0635110:CDS
GAGGCAAATGTGATTTCAGA+TGG 0.555283 4_3:-23289711 None:intergenic
CAGGGTTGGTTTCTGAGGGT+CGG 0.555890 4_3:+23290372 Msa0635110:five_prime_UTR
CATTATTCAATTCTGTGTCG+AGG 0.560684 4_3:+23288470 Msa0635110:five_prime_UTR
CAACGGTTTCGAGTGCGACG+TGG 0.561289 4_3:-23288192 None:intergenic
GAGTTGTTCTCTGAGATGAT+GGG 0.562391 4_3:+23289072 Msa0635110:five_prime_UTR
TCACTGCCTGTAGCCATACA+GGG 0.564166 4_3:+23290354 Msa0635110:five_prime_UTR
ATTCAACTATTATCAAGAGA+AGG 0.564873 4_3:+23289184 Msa0635110:five_prime_UTR
GAACGGTAACAAATGTTGCT+TGG 0.568934 4_3:-23290025 None:intergenic
ATGCATGAACAATGCATTGG+TGG 0.569463 4_3:+23289221 Msa0635110:five_prime_UTR
GTTCTGTTGTTATTTCTGAG+AGG 0.570912 4_3:+23295926 Msa0635110:CDS
CAGCGAGGATAAGAGCGCAC+AGG 0.572551 4_3:-23290054 None:intergenic
TGGGAAATTGGTTGAAGACA+TGG 0.572843 4_3:-23288150 None:intergenic
GTGACAGAAATGTTGTTATG+TGG 0.575791 4_3:+23288998 Msa0635110:five_prime_UTR
GTGTGAGTATGTGGAAATGA+GGG 0.575905 4_3:-23288236 None:intergenic
GGGAATCGAAGATGCGCGTA+AGG 0.580301 4_3:+23289566 Msa0635110:five_prime_UTR
GAAGCAGGACTGCAGTTCCA+TGG 0.580496 4_3:+23289468 Msa0635110:five_prime_UTR
TTGTTGTAAGGAGTCTCCTA+AGG 0.581508 4_3:+23289743 Msa0635110:five_prime_UTR
CTTTCTTGTCACTTTCACCA+CGG 0.581982 4_3:+23292341 Msa0635110:CDS
ATTGACATGTATTCCAAGTG+TGG 0.583065 4_3:+23289543 Msa0635110:five_prime_UTR
TTTATGCATGAACAATGCAT+TGG 0.584054 4_3:+23289218 Msa0635110:five_prime_UTR
AATATTAAAAGGTATGTGAA+AGG 0.585967 4_3:+23287725 Msa0635110:five_prime_UTR
TGTGAAATTTCATCAGAACT+AGG 0.586183 4_3:-23290809 None:intergenic
AGTAGATCACTACGCTTGCA+TGG 0.588323 4_3:+23290439 Msa0635110:five_prime_UTR
AATCAATGTCCAGAGGATAC+GGG 0.590039 4_3:+23294341 Msa0635110:CDS
CATATACATACCCAACAAAG+AGG 0.590521 4_3:-23289838 None:intergenic
GACAAGAAAGGAGCTGAGAA+GGG 0.591055 4_3:-23292328 None:intergenic
AATGTTATGATTTCTGGTCA+TGG 0.593707 4_3:+23288718 Msa0635110:five_prime_UTR
ATTTAGCATACATATCTACA+AGG 0.593834 4_3:-23290148 None:intergenic
TGACATGTATTCCAAGTGTG+GGG 0.594190 4_3:+23289545 Msa0635110:five_prime_UTR
GGATATGTATGCTAAGGCTG+GGG 0.596512 4_3:+23289242 Msa0635110:five_prime_UTR
CCAACTTAACTGTAAGGCCA+TGG 0.596722 4_3:-23289485 None:intergenic
CAATGAGAGTTGACGGTCCG+TGG 0.597228 4_3:-23292358 None:intergenic
GAGCGCACAGGCTCGCAGAA+CGG 0.597417 4_3:-23290042 None:intergenic
CTCTTATCCTCGCTGCAAGA+CGG 0.597472 4_3:+23290062 Msa0635110:five_prime_UTR
ATTTCTGGTCATGGTAAGAG+AGG 0.597726 4_3:+23288727 Msa0635110:five_prime_UTR
TGGATACGTGCAAGAAGAAG+AGG 0.600264 4_3:+23289338 Msa0635110:five_prime_UTR
TAGAGTACGTAAACTCATCC+GGG 0.600556 4_3:-23289107 None:intergenic
GATATCGTCGAGGTCTACAT+TGG 0.604596 4_3:+23288801 Msa0635110:five_prime_UTR
ACTAGGATGTGACATATCGC+TGG 0.604946 4_3:-23290792 None:intergenic
GTTCATTGACAAACTAGATG+TGG 0.605666 4_3:+23290505 Msa0635110:five_prime_UTR
CGTGGTGAAAGTGACAAGAA+AGG 0.612507 4_3:-23292340 None:intergenic
TTTGTTGGTTCATGGTGAGG+CGG 0.615436 4_3:+23288870 Msa0635110:five_prime_UTR
TGACTGTAGATGGTTGTGAA+AGG 0.616806 4_3:+23294409 Msa0635110:CDS
TACAGGCAGTGAGCACTCCA+AGG 0.619864 4_3:-23290343 None:intergenic
AAGGAAGGGATAAGTTTCAA+GGG 0.621146 4_3:+23287744 Msa0635110:five_prime_UTR
ATTTCGCGTAGAAATTAATG+AGG 0.621182 4_3:-23288423 None:intergenic
TCCAACTGTTTGATGAAATG+CGG 0.622862 4_3:+23288569 Msa0635110:five_prime_UTR
TAAATCTCTAAGGAGAACAA+TGG 0.627400 4_3:+23290697 Msa0635110:five_prime_UTR
CTCCTTACAACAATCTATGA+GGG 0.627431 4_3:-23289733 None:intergenic
ATTGAGACCACACTCCACTC+GGG 0.628370 4_3:-23289603 None:intergenic
GAACTAACTTACCGAACTCG+AGG 0.629853 4_3:-23288348 None:intergenic
AACGGTTTCGAGTGCGACGT+GGG 0.631364 4_3:-23288191 None:intergenic
GATGGGGTGTGGCAATGACC+CGG 0.632436 4_3:+23289089 Msa0635110:five_prime_UTR
CATTGCGCTATATTAAAGAG+TGG 0.633215 4_3:+23289786 Msa0635110:five_prime_UTR
TTTATTCTTGCATGCCCGAG+TGG 0.633719 4_3:+23289589 Msa0635110:five_prime_UTR
TTGCATGCCCGAGTGGAGTG+TGG 0.634547 4_3:+23289596 Msa0635110:five_prime_UTR
GTTGATCTACTTGGTCGATG+TGG 0.636617 4_3:+23290461 Msa0635110:five_prime_UTR
TAAAAGGTATGTGAAAGGAA+GGG 0.638917 4_3:+23287730 Msa0635110:five_prime_UTR
GTTGTAGTAATGTTGTTGCG+TGG 0.641669 4_3:+23288695 Msa0635110:five_prime_UTR
AGTACCGGACGAGGTATGCA+TGG 0.642327 4_3:+23289407 Msa0635110:five_prime_UTR
TGAGAGTGAGTTTATCAATG+AGG 0.649589 4_3:-23288293 None:intergenic
GTAGATATGTATGCTAAATG+TGG 0.651416 4_3:+23290152 Msa0635110:five_prime_UTR
GACATGTATTCCAAGTGTGG+GGG 0.651481 4_3:+23289546 Msa0635110:five_prime_UTR
TGTGTTGTGCAAAGAGATGA+CGG 0.658947 4_3:-23292402 None:intergenic
AGTTGTTCTCTGAGATGATG+GGG 0.663808 4_3:+23289073 Msa0635110:five_prime_UTR
CTGTTTGATGAAATGCGGAG+TGG 0.673199 4_3:+23288574 Msa0635110:five_prime_UTR
ACTACAATCCAGCTACACCC+GGG 0.675625 4_3:-23290743 None:intergenic
TTTCGGAGAATGAATCGACA+TGG 0.678966 4_3:+23289381 Msa0635110:five_prime_UTR
ACCTTAAAAGCATTGTACTG+TGG 0.679123 4_3:+23289910 Msa0635110:five_prime_UTR
TAATAGTTGAATGCAACTGA+CGG 0.680162 4_3:-23289173 None:intergenic
TTTAGCATACATATCTACAA+GGG 0.682680 4_3:-23290147 None:intergenic
CTCTTGACCGTCTTGCAGCG+AGG 0.684878 4_3:-23290069 None:intergenic
TGGAGGAGAGAAGACACTGA+CGG 0.689210 4_3:-23287669 None:intergenic
CTTACAACAATCTATGAGGG+AGG 0.692723 4_3:-23289730 None:intergenic
ACATGGCGTAGTACCGGACG+AGG 0.698181 4_3:+23289398 Msa0635110:five_prime_UTR
TCACAGTTCCACTTGCTCGG+CGG 0.698603 4_3:-23287986 None:intergenic
ATTGGTGGATATGTATGCTA+AGG 0.701324 4_3:+23289236 Msa0635110:five_prime_UTR
TGAATGGTGTGATATCGTCG+AGG 0.745167 4_3:+23288791 Msa0635110:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATAAGTTATAGAATTA+TGG + chr4_3:23292555-23292574 Msa0635110:intron 10.0%
!! ATAATAAGTTATAGAATTAT+GGG + chr4_3:23292556-23292575 Msa0635110:intron 10.0%
!! TAATCCATAAATATATTTAT+GGG - chr4_3:23293472-23293491 None:intergenic 10.0%
!!! TAATTTTTATGTTACATTTT+AGG + chr4_3:23293678-23293697 Msa0635110:intron 10.0%
!!! AATTTTTATGTTACATTTTA+GGG + chr4_3:23293679-23293698 Msa0635110:intron 10.0%
!!! TTTAATTGTAATTGATATTT+TGG + chr4_3:23294866-23294885 Msa0635110:intron 10.0%
!! AATTTATGAAATTTAATTAG+AGG + chr4_3:23295977-23295996 Msa0635110:three_prime_UTR 10.0%
!! ATATTATAAAGTTGTACATA+TGG - chr4_3:23290647-23290666 None:intergenic 15.0%
!!! ATAGCTTTTTTATTGTAAAT+AGG + chr4_3:23291053-23291072 Msa0635110:intron 15.0%
!! TTAATTTAAGCTTGTAATTT+AGG + chr4_3:23291334-23291353 Msa0635110:intron 15.0%
!!! TTTGAGAATTTTTCTTATAT+TGG + chr4_3:23292088-23292107 Msa0635110:intron 15.0%
!!! TGATTATGTTTTGAATTAAT+TGG + chr4_3:23292212-23292231 Msa0635110:intron 15.0%
!! TAAACTATATCAAAATTCAA+TGG - chr4_3:23292463-23292482 None:intergenic 15.0%
!! CAGACAAAAAAATTATATTT+GGG - chr4_3:23293420-23293439 None:intergenic 15.0%
!! TCAGACAAAAAAATTATATT+TGG - chr4_3:23293421-23293440 None:intergenic 15.0%
!! GTAATCCATAAATATATTTA+TGG - chr4_3:23293473-23293492 None:intergenic 15.0%
!!! TTCCAATTTTTTCTATTTTT+TGG + chr4_3:23293578-23293597 Msa0635110:intron 15.0%
!! TACCAAAAAATAGAAAAAAT+TGG - chr4_3:23293583-23293602 None:intergenic 15.0%
!!! ATTTTGCTGTATTTTTATTT+AGG + chr4_3:23293888-23293907 Msa0635110:intron 15.0%
!!! TTTTGCTGTATTTTTATTTA+GGG + chr4_3:23293889-23293908 Msa0635110:intron 15.0%
!! TATTACTTATGAGTTAAATA+TGG + chr4_3:23294002-23294021 Msa0635110:intron 15.0%
!! CAAAAAAATTAATAAAGTGA+AGG - chr4_3:23295520-23295539 None:intergenic 15.0%
!!! TTTAACATAAGATTTTGAAA+TGG - chr4_3:23295565-23295584 None:intergenic 15.0%
!! ATTCTTTATAATTTACTACA+TGG + chr4_3:23295777-23295796 Msa0635110:intron 15.0%
!!! ATTTTCTGCCAAATATTAAA+AGG + chr4_3:23287714-23287733 Msa0635110:five_prime_UTR 20.0%
!!! TTCACATACCTTTTAATATT+TGG - chr4_3:23287725-23287744 None:intergenic 20.0%
!!! AATATTAAAAGGTATGTGAA+AGG + chr4_3:23287725-23287744 Msa0635110:five_prime_UTR 20.0%
!!! TTGAATTTTATCGAAAAATG+AGG + chr4_3:23288767-23288786 Msa0635110:five_prime_UTR 20.0%
!!! AGTTCATTGATTAATATGTA+TGG + chr4_3:23288928-23288947 Msa0635110:five_prime_UTR 20.0%
!!! GTTCATTGATTAATATGTAT+GGG + chr4_3:23288929-23288948 Msa0635110:five_prime_UTR 20.0%
!! AATATCGAGATAATATTTCA+TGG + chr4_3:23289301-23289320 Msa0635110:five_prime_UTR 20.0%
!!! GAAATCACATCTTTTTTTAT+AGG - chr4_3:23290215-23290234 None:intergenic 20.0%
!! TAAAAAAAGATGTGATTTCT+TGG + chr4_3:23290216-23290235 Msa0635110:five_prime_UTR 20.0%
!! AAATTAATAACCATTTGCAA+AGG + chr4_3:23291011-23291030 Msa0635110:intron 20.0%
!!! TACTTATTTGAATTTTGAAC+AGG + chr4_3:23291108-23291127 Msa0635110:intron 20.0%
!!! TACATTTTGATAGTTATCAT+TGG + chr4_3:23291257-23291276 Msa0635110:intron 20.0%
!! TGAATTCAGAGTTAAATTTA+TGG - chr4_3:23291407-23291426 None:intergenic 20.0%
!!! TGAATGTTTGATTTTTTGTT+TGG + chr4_3:23291998-23292017 Msa0635110:intron 20.0%
!!! GAATGTTTGATTTTTTGTTT+GGG + chr4_3:23291999-23292018 Msa0635110:intron 20.0%
!!! AATGTTTGATTTTTTGTTTG+GGG + chr4_3:23292000-23292019 Msa0635110:intron 20.0%
!!! AAATGTTTTTTGAAACAACT+TGG - chr4_3:23292961-23292980 None:intergenic 20.0%
!!! TTATTTTCTGTTTTTTGAAC+TGG + chr4_3:23293106-23293125 Msa0635110:intron 20.0%
!! AAAAAAATTATATTTGGGTG+AGG - chr4_3:23293415-23293434 None:intergenic 20.0%
!! AGAACCCATAAATATATTTA+TGG + chr4_3:23293465-23293484 Msa0635110:intron 20.0%
!!! TTTCTGGTAACATATATTTA+TGG + chr4_3:23293554-23293573 Msa0635110:intron 20.0%
!! GTATTCATAATTTCTTGATT+TGG + chr4_3:23293600-23293619 Msa0635110:intron 20.0%
!!! CAATTTTGATGTTACATTTT+AGG + chr4_3:23293716-23293735 Msa0635110:intron 20.0%
!!! TTTGCTGTATTTTTATTTAG+GGG + chr4_3:23293890-23293909 Msa0635110:intron 20.0%
!! TTAGCATCTTATATTAGTTA+GGG + chr4_3:23293936-23293955 Msa0635110:intron 20.0%
!! TTAATTAGTTGTTAGACTTA+GGG + chr4_3:23294492-23294511 Msa0635110:intron 20.0%
!! ATTTATATGAGCTTATCTAT+TGG + chr4_3:23294527-23294546 Msa0635110:intron 20.0%
!! CTTATTTCCATAAATTCTTT+AGG + chr4_3:23294624-23294643 Msa0635110:intron 20.0%
!! TGATCATTGAAAATATGAAA+AGG - chr4_3:23294894-23294913 None:intergenic 20.0%
! AATATTTGGCAGAAAATTCA+AGG - chr4_3:23287711-23287730 None:intergenic 25.0%
! CATACCTCCATAATTAAAAA+CGG + chr4_3:23288370-23288389 Msa0635110:five_prime_UTR 25.0%
!!! TTCGAATCCGTTTTTAATTA+TGG - chr4_3:23288380-23288399 None:intergenic 25.0%
! ATTCAACTATTATCAAGAGA+AGG + chr4_3:23289184-23289203 Msa0635110:five_prime_UTR 25.0%
! TATTATCAAGAGAAGGTTTA+CGG + chr4_3:23289191-23289210 Msa0635110:five_prime_UTR 25.0%
! TTTAGCATACATATCTACAA+GGG - chr4_3:23290150-23290169 None:intergenic 25.0%
! ATTTAGCATACATATCTACA+AGG - chr4_3:23290151-23290170 None:intergenic 25.0%
!! AATGATTTGGGCTAATTTAT+TGG + chr4_3:23290538-23290557 Msa0635110:five_prime_UTR 25.0%
!! ATGATTTGGGCTAATTTATT+GGG + chr4_3:23290539-23290558 Msa0635110:five_prime_UTR 25.0%
! TATACATGGAGATGAAAAAA+GGG + chr4_3:23290571-23290590 Msa0635110:five_prime_UTR 25.0%
! TTTGAGCAACTAAATTTAAC+TGG - chr4_3:23290900-23290919 None:intergenic 25.0%
! AATTTAGTTGCTCAAAACAA+TGG + chr4_3:23290904-23290923 Msa0635110:exon 25.0%
! ATTTAGTTGCTCAAAACAAT+GGG + chr4_3:23290905-23290924 Msa0635110:exon 25.0%
! TTTCTAATTGTTTGTGGAAA+GGG + chr4_3:23290979-23290998 Msa0635110:intron 25.0%
!! CATTTGTTGATATCAATGAA+TGG + chr4_3:23291206-23291225 Msa0635110:intron 25.0%
!!! ATTTGTTTTTTTGGCACTTA+TGG - chr4_3:23291443-23291462 None:intergenic 25.0%
!! GAATATTTGGTGAAATCAAT+GGG - chr4_3:23291707-23291726 None:intergenic 25.0%
!! AGAATATTTGGTGAAATCAA+TGG - chr4_3:23291708-23291727 None:intergenic 25.0%
!!! TTGTTGTTTGAAAGTGATTA+TGG + chr4_3:23292048-23292067 Msa0635110:intron 25.0%
!!! TACTGTATAAGGTTTTGAAT+TGG + chr4_3:23292167-23292186 Msa0635110:intron 25.0%
! CAAATAGGTCTATCAAATTA+AGG - chr4_3:23292712-23292731 None:intergenic 25.0%
! AAACAACTTGGTAAGATTTA+AGG - chr4_3:23292949-23292968 None:intergenic 25.0%
!!! GAAAATAACTTGTTTAACCA+TGG - chr4_3:23293094-23293113 None:intergenic 25.0%
!! TTTATGGATTACTGAAGAAT+CGG + chr4_3:23293481-23293500 Msa0635110:intron 25.0%
! GTTAGCATCTTATATTAGTT+AGG + chr4_3:23293935-23293954 Msa0635110:intron 25.0%
! GTTAATTAGTTGTTAGACTT+AGG + chr4_3:23294491-23294510 Msa0635110:intron 25.0%
!!! GTTTAAGCTTTGTTCAAAAA+TGG + chr4_3:23295422-23295441 Msa0635110:intron 25.0%
! TTAAAAGGTATGTGAAAGGA+AGG + chr4_3:23287729-23287748 Msa0635110:five_prime_UTR 30.0%
! TAAAAGGTATGTGAAAGGAA+GGG + chr4_3:23287730-23287749 Msa0635110:five_prime_UTR 30.0%
TCAAGGGTAAAATAGACAAA+TGG + chr4_3:23287760-23287779 Msa0635110:five_prime_UTR 30.0%
CAAGGGTAAAATAGACAAAT+GGG + chr4_3:23287761-23287780 Msa0635110:five_prime_UTR 30.0%
!! ATTTTGAAGGTGAAAAAGTG+CGG + chr4_3:23287853-23287872 Msa0635110:five_prime_UTR 30.0%
AGTTTGATGAATTGGGAAAT+TGG - chr4_3:23288127-23288146 None:intergenic 30.0%
ATGGTTGAGTTTGATGAATT+GGG - chr4_3:23288134-23288153 None:intergenic 30.0%
GTATTGAAGTGAATGAGTTT+GGG - chr4_3:23288172-23288191 None:intergenic 30.0%
!!! GAAGTTTCTGGAATAAGTTT+TGG - chr4_3:23288261-23288280 None:intergenic 30.0%
!! GAATCCGTTTTTAATTATGG+AGG - chr4_3:23288377-23288396 None:intergenic 30.0%
ATTTCGCGTAGAAATTAATG+AGG - chr4_3:23288426-23288445 None:intergenic 30.0%
GCTACATTTACTGCTTTAAT+TGG + chr4_3:23288511-23288530 Msa0635110:five_prime_UTR 30.0%
ACATTTACTGCTTTAATTGG+CGG + chr4_3:23288514-23288533 Msa0635110:five_prime_UTR 30.0%
!!! TGGTTTTGTTTTGGATGAAT+TGG + chr4_3:23288594-23288613 Msa0635110:five_prime_UTR 30.0%
!! AATGTTATGATTTCTGGTCA+TGG + chr4_3:23288718-23288737 Msa0635110:five_prime_UTR 30.0%
TGGTAAGAGAGGTTATTATA+AGG + chr4_3:23288738-23288757 Msa0635110:five_prime_UTR 30.0%
TAAGAGAGGTTATTATAAGG+AGG + chr4_3:23288741-23288760 Msa0635110:five_prime_UTR 30.0%
TATCGAAAAATGAGGATGAA+TGG + chr4_3:23288775-23288794 Msa0635110:five_prime_UTR 30.0%
GTTATGTGGAATACAATTCT+TGG + chr4_3:23289012-23289031 Msa0635110:five_prime_UTR 30.0%
TGGTTGTTTAAGTGATGTTA+TGG + chr4_3:23289050-23289069 Msa0635110:five_prime_UTR 30.0%
TGCTTCGAATTCTTAGATAT+CGG + chr4_3:23289150-23289169 Msa0635110:five_prime_UTR 30.0%
TAATAGTTGAATGCAACTGA+CGG - chr4_3:23289176-23289195 None:intergenic 30.0%
TTTATGCATGAACAATGCAT+TGG + chr4_3:23289218-23289237 Msa0635110:five_prime_UTR 30.0%
! CTGAAGCTTTTAACATGTTT+CGG + chr4_3:23289364-23289383 Msa0635110:five_prime_UTR 30.0%
! AATATTAAGGTACTAGAAGC+AGG + chr4_3:23289453-23289472 Msa0635110:five_prime_UTR 30.0%
GTATATGGATTCACAAATGT+TGG + chr4_3:23289854-23289873 Msa0635110:five_prime_UTR 30.0%
GTAGATATGTATGCTAAATG+TGG + chr4_3:23290152-23290171 Msa0635110:five_prime_UTR 30.0%
TCTTGGAATTCAATGATTGT+TGG + chr4_3:23290233-23290252 Msa0635110:five_prime_UTR 30.0%
CTTGGAATTCAATGATTGTT+GGG + chr4_3:23290234-23290253 Msa0635110:five_prime_UTR 30.0%
AACAACATGGTAACCTATTA+CGG + chr4_3:23290404-23290423 Msa0635110:five_prime_UTR 30.0%
GTATACATGGAGATGAAAAA+AGG + chr4_3:23290570-23290589 Msa0635110:five_prime_UTR 30.0%
ATACATGGAGATGAAAAAAG+GGG + chr4_3:23290572-23290591 Msa0635110:five_prime_UTR 30.0%
! ACATATGGAGAAGAATTTTG+CGG - chr4_3:23290632-23290651 None:intergenic 30.0%
CAACTTTATAATATGCATGC+TGG + chr4_3:23290653-23290672 Msa0635110:five_prime_UTR 30.0%
! TAAATCTCTAAGGAGAACAA+TGG + chr4_3:23290697-23290716 Msa0635110:five_prime_UTR 30.0%
TGTGAAATTTCATCAGAACT+AGG - chr4_3:23290812-23290831 None:intergenic 30.0%
! GAAGTGTTTCTAATTGTTTG+TGG + chr4_3:23290973-23290992 Msa0635110:intron 30.0%
GTTTCTAATTGTTTGTGGAA+AGG + chr4_3:23290978-23290997 Msa0635110:intron 30.0%
TTCTATTCAACCTTTGCAAA+TGG - chr4_3:23291024-23291043 None:intergenic 30.0%
!!! TTTTTTTGGCACTTATGGTT+TGG - chr4_3:23291438-23291457 None:intergenic 30.0%
!!! TGGAGCAGAATTTGTTTTTT+TGG - chr4_3:23291452-23291471 None:intergenic 30.0%
AAAGAGAAAGAGAACTAAAG+CGG - chr4_3:23291500-23291519 None:intergenic 30.0%
!!! TCTACTCTTTTTTCACTTCA+AGG + chr4_3:23291823-23291842 Msa0635110:intron 30.0%
!!! CTACTCTTTTTTCACTTCAA+GGG + chr4_3:23291824-23291843 Msa0635110:intron 30.0%
TGTATGAACTTAGTGTTATC+TGG + chr4_3:23291958-23291977 Msa0635110:intron 30.0%
GTATGAACTTAGTGTTATCT+GGG + chr4_3:23291959-23291978 Msa0635110:intron 30.0%
!! AAAGTGATTATGGAAGTGTT+AGG + chr4_3:23292058-23292077 Msa0635110:intron 30.0%
AGTGTTCTGATTACTGTATA+AGG + chr4_3:23292156-23292175 Msa0635110:intron 30.0%
AATTGGATTCAGTTACTTGT+AGG + chr4_3:23292229-23292248 Msa0635110:intron 30.0%
TAGAATTATGGGACCAAAAT+AGG + chr4_3:23292567-23292586 Msa0635110:intron 30.0%
AGAATTATGGGACCAAAATA+GGG + chr4_3:23292568-23292587 Msa0635110:intron 30.0%
TCTGTGAGAAGAAAACTAAA+TGG + chr4_3:23292683-23292702 Msa0635110:intron 30.0%
CTGTGAGAAGAAAACTAAAT+GGG + chr4_3:23292684-23292703 Msa0635110:intron 30.0%
AATAAGGTGAAAACATCTCA+TGG - chr4_3:23292784-23292803 None:intergenic 30.0%
ATGTAGAGTTCATGGAAATA+AGG - chr4_3:23292800-23292819 None:intergenic 30.0%
AGATTATCATGTAGAGTTCA+TGG - chr4_3:23292808-23292827 None:intergenic 30.0%
GTAAGATTTAAGGACCAATT+TGG - chr4_3:23292939-23292958 None:intergenic 30.0%
GCAACAATTGATAGGAAATA+CGG - chr4_3:23293180-23293199 None:intergenic 30.0%
! TCTGATTTCGGTCAATTTTA+TGG + chr4_3:23293208-23293227 Msa0635110:intron 30.0%
! CTGATTTCGGTCAATTTTAT+GGG + chr4_3:23293209-23293228 Msa0635110:intron 30.0%
!!! AAAAAAGTGCTGTTTTCACA+GGG + chr4_3:23293245-23293264 Msa0635110:intron 30.0%
ATAACCCTTGACAAATTGAA+AGG + chr4_3:23293359-23293378 Msa0635110:intron 30.0%
TAACCCTTGACAAATTGAAA+GGG + chr4_3:23293360-23293379 Msa0635110:intron 30.0%
! ATTTGTGATTTTCACCTACT+AGG + chr4_3:23293637-23293656 Msa0635110:intron 30.0%
! TTTGTGATTTTCACCTACTA+GGG + chr4_3:23293638-23293657 Msa0635110:intron 30.0%
TGAAAAATCAAATCCCTAGT+AGG - chr4_3:23293654-23293673 None:intergenic 30.0%
!! GATGTTACATTTTAGGAGAA+TGG + chr4_3:23293723-23293742 Msa0635110:intron 30.0%
! GGAGTTGTTGAAAATTTTGT+TGG + chr4_3:23293789-23293808 Msa0635110:CDS 30.0%
! AAAATTTTGTTGGAGAATGC+TGG + chr4_3:23293799-23293818 Msa0635110:CDS 30.0%
! AAAGAGTGTATCAATACAGA+AGG - chr4_3:23293859-23293878 None:intergenic 30.0%
!! TGAGATATGTATTGGTTTAG+TGG + chr4_3:23293962-23293981 Msa0635110:intron 30.0%
GGTGTTCAAATATAACTTCT+AGG + chr4_3:23294047-23294066 Msa0635110:intron 30.0%
AGTTAATTACGATCATTGGA+TGG - chr4_3:23294141-23294160 None:intergenic 30.0%
ATGCAGTTAATTACGATCAT+TGG - chr4_3:23294145-23294164 None:intergenic 30.0%
AATCATCTAGTTGAAACACA+TGG + chr4_3:23294179-23294198 Msa0635110:intron 30.0%
TTAGAGAGAACAAATGCATA+TGG - chr4_3:23294210-23294229 None:intergenic 30.0%
AAACTTTCATAACTGTTGAC+AGG + chr4_3:23294281-23294300 Msa0635110:intron 30.0%
!!! ACAGGTTGAATTTTCAAGTT+TGG + chr4_3:23294299-23294318 Msa0635110:intron 30.0%
AAGCTCTCCTAAAGAATTTA+TGG - chr4_3:23294634-23294653 None:intergenic 30.0%
ACGATAAACACTTATGCTAA+AGG + chr4_3:23294693-23294712 Msa0635110:intron 30.0%
CGATAAACACTTATGCTAAA+GGG + chr4_3:23294694-23294713 Msa0635110:intron 30.0%
ATTTGTTTAGCACATGACTT+AGG - chr4_3:23294772-23294791 None:intergenic 30.0%
! CAATGATCAGTACTAAGTTT+TGG + chr4_3:23294905-23294924 Msa0635110:intron 30.0%
!!! TTTTGGTTTTGCAATCCTTT+AGG + chr4_3:23294922-23294941 Msa0635110:intron 30.0%
! TCTTAAGCATAGTTTGTAGT+AGG + chr4_3:23294946-23294965 Msa0635110:intron 30.0%
ATTAACTTAGCTATGCAAGT+TGG + chr4_3:23294970-23294989 Msa0635110:intron 30.0%
TTAATGAAGCCATTATAGGA+GGG - chr4_3:23295088-23295107 None:intergenic 30.0%
ATTAATGAAGCCATTATAGG+AGG - chr4_3:23295089-23295108 None:intergenic 30.0%
AGGATTAATGAAGCCATTAT+AGG - chr4_3:23295092-23295111 None:intergenic 30.0%
ATTAGAATTGAGAACAGTCA+AGG - chr4_3:23295147-23295166 None:intergenic 30.0%
CTATCAAATTCCTGAAATGT+AGG - chr4_3:23295223-23295242 None:intergenic 30.0%
! GAATTTGATCGATTTCTCAT+TGG + chr4_3:23295285-23295304 Msa0635110:CDS 30.0%
GAGTGTAATGCTAGTATTAA+TGG + chr4_3:23295829-23295848 Msa0635110:intron 30.0%
TTCAAACATAACCAACATGT+GGG - chr4_3:23295855-23295874 None:intergenic 30.0%
!! TTCTGTTGTTATTTCTGAGA+GGG + chr4_3:23295927-23295946 Msa0635110:CDS 30.0%
AAAGGAAGGGATAAGTTTCA+AGG + chr4_3:23287743-23287762 Msa0635110:five_prime_UTR 35.0%
AAGGAAGGGATAAGTTTCAA+GGG + chr4_3:23287744-23287763 Msa0635110:five_prime_UTR 35.0%
! AGAATCGATTTCAAGAAGCT+AGG + chr4_3:23287807-23287826 Msa0635110:five_prime_UTR 35.0%
! GAATCGATTTCAAGAAGCTA+GGG + chr4_3:23287808-23287827 Msa0635110:five_prime_UTR 35.0%
!! TCTCCAAGAATCGATTTTGA+AGG + chr4_3:23287840-23287859 Msa0635110:five_prime_UTR 35.0%
! TCACCTTCAAAATCGATTCT+TGG - chr4_3:23287846-23287865 None:intergenic 35.0%
TGTTGTATTCAGTTGGATGA+AGG - chr4_3:23288035-23288054 None:intergenic 35.0%
GCATCTATGTTGTATTCAGT+TGG - chr4_3:23288042-23288061 None:intergenic 35.0%
CATGGTTGAGTTTGATGAAT+TGG - chr4_3:23288135-23288154 None:intergenic 35.0%
AGTGAATGAGTTTGGGAAAT+TGG - chr4_3:23288165-23288184 None:intergenic 35.0%
! GGTATTGAAGTGAATGAGTT+TGG - chr4_3:23288173-23288192 None:intergenic 35.0%
!! TGAATTTGAGTTGGTTGCAA+CGG - chr4_3:23288212-23288231 None:intergenic 35.0%
GAGGGAATTTGAATTTGAGT+TGG - chr4_3:23288221-23288240 None:intergenic 35.0%
!! TAAGTTTTGGTGTGAGTATG+TGG - chr4_3:23288248-23288267 None:intergenic 35.0%
TGTAAGTTTGTGGAAGTTTC+TGG - chr4_3:23288273-23288292 None:intergenic 35.0%
ATCAATGAGGTGTAAGTTTG+TGG - chr4_3:23288283-23288302 None:intergenic 35.0%
TGAGAGTGAGTTTATCAATG+AGG - chr4_3:23288296-23288315 None:intergenic 35.0%
CATTATTCAATTCTGTGTCG+AGG + chr4_3:23288470-23288489 Msa0635110:five_prime_UTR 35.0%
TCCAACTGTTTGATGAAATG+CGG + chr4_3:23288569-23288588 Msa0635110:five_prime_UTR 35.0%
TTGAATGCGTGTGTGAATTT+AGG + chr4_3:23288631-23288650 Msa0635110:five_prime_UTR 35.0%
TGAATGCGTGTGTGAATTTA+GGG + chr4_3:23288632-23288651 Msa0635110:five_prime_UTR 35.0%
!! GTGTGATTTGTTTGATGAGA+TGG + chr4_3:23288669-23288688 Msa0635110:five_prime_UTR 35.0%
! GATTTGTTTGATGAGATGGA+TGG + chr4_3:23288673-23288692 Msa0635110:five_prime_UTR 35.0%
GTGACAGAAATGTTGTTATG+TGG + chr4_3:23288998-23289017 Msa0635110:five_prime_UTR 35.0%
! ATTGGTGGATATGTATGCTA+AGG + chr4_3:23289236-23289255 Msa0635110:five_prime_UTR 35.0%
TCATGGAATGCTATTCTTGT+TGG + chr4_3:23289318-23289337 Msa0635110:five_prime_UTR 35.0%
CAGTGCTTGTGGAAATATTA+AGG + chr4_3:23289440-23289459 Msa0635110:five_prime_UTR 35.0%
CTAAACCCAACTTAACTGTA+AGG - chr4_3:23289494-23289513 None:intergenic 35.0%
ATTGACATGTATTCCAAGTG+TGG + chr4_3:23289543-23289562 Msa0635110:five_prime_UTR 35.0%
TTGACATGTATTCCAAGTGT+GGG + chr4_3:23289544-23289563 Msa0635110:five_prime_UTR 35.0%
CTCCTTACAACAATCTATGA+GGG - chr4_3:23289736-23289755 None:intergenic 35.0%
ACTCCTTACAACAATCTATG+AGG - chr4_3:23289737-23289756 None:intergenic 35.0%
! AGTCTCCTAAGGTGATTTTA+GGG + chr4_3:23289754-23289773 Msa0635110:five_prime_UTR 35.0%
CATTGCGCTATATTAAAGAG+TGG + chr4_3:23289786-23289805 Msa0635110:five_prime_UTR 35.0%
! TTAAAGAGTGGCCTTTTATG+TGG + chr4_3:23289798-23289817 Msa0635110:five_prime_UTR 35.0%
AGAATTCGCTACCACATAAA+AGG - chr4_3:23289812-23289831 None:intergenic 35.0%
! TTATGTGGTAGCGAATTCTT+AGG + chr4_3:23289813-23289832 Msa0635110:five_prime_UTR 35.0%
ATTCTTAGGTACCTCTTTGT+TGG + chr4_3:23289827-23289846 Msa0635110:five_prime_UTR 35.0%
TTCTTAGGTACCTCTTTGTT+GGG + chr4_3:23289828-23289847 Msa0635110:five_prime_UTR 35.0%
CATATACATACCCAACAAAG+AGG - chr4_3:23289841-23289860 None:intergenic 35.0%
CTCTTTGTTGGGTATGTATA+TGG + chr4_3:23289839-23289858 Msa0635110:five_prime_UTR 35.0%
!! ACCTTAAAAGCATTGTACTG+TGG + chr4_3:23289910-23289929 Msa0635110:five_prime_UTR 35.0%
! TCCACAGTACAATGCTTTTA+AGG - chr4_3:23289914-23289933 None:intergenic 35.0%
TCAAAATGATTGCAGTGATC+AGG + chr4_3:23289956-23289975 Msa0635110:five_prime_UTR 35.0%
CATTTCTCGGTACAAGTTTA+AGG - chr4_3:23289982-23290001 None:intergenic 35.0%
TATTGTTGTCACGCATTTCT+CGG - chr4_3:23289995-23290014 None:intergenic 35.0%
CATCTAAGTCAAAACCAGTA+TGG - chr4_3:23290112-23290131 None:intergenic 35.0%
ATTGTTGGGTTTGCGAAAAA+TGG + chr4_3:23290248-23290267 Msa0635110:five_prime_UTR 35.0%
GTTTGCGAAAAATGGTTATG+CGG + chr4_3:23290256-23290275 Msa0635110:five_prime_UTR 35.0%
GAAAAATGGTTATGCGGAAA+GGG + chr4_3:23290262-23290281 Msa0635110:five_prime_UTR 35.0%
! TCGGCAAATTTTCAACAACA+TGG + chr4_3:23290391-23290410 Msa0635110:five_prime_UTR 35.0%
GTTCATTGACAAACTAGATG+TGG + chr4_3:23290505-23290524 Msa0635110:five_prime_UTR 35.0%
TTAGCCCAAATCATTGCATT+GGG - chr4_3:23290533-23290552 None:intergenic 35.0%
ATTAGCCCAAATCATTGCAT+TGG - chr4_3:23290534-23290553 None:intergenic 35.0%
TATAATATGCATGCTGGATC+AGG + chr4_3:23290659-23290678 Msa0635110:five_prime_UTR 35.0%
AATGAAGTCCAAAAAAAGCC+CGG + chr4_3:23290725-23290744 Msa0635110:five_prime_UTR 35.0%
AATGAGAGACAATAGATTGC+AGG + chr4_3:23290856-23290875 Msa0635110:five_prime_UTR 35.0%
GATTCTGTTTCATCTTTGCT+TGG + chr4_3:23291132-23291151 Msa0635110:CDS 35.0%
!! ATTTGGGTATCGAATTGGTT+TGG - chr4_3:23291472-23291491 None:intergenic 35.0%
!! GATAGATTTGGGTATCGAAT+TGG - chr4_3:23291477-23291496 None:intergenic 35.0%
AACTAAAGCGGGATAGATTT+GGG - chr4_3:23291488-23291507 None:intergenic 35.0%
AAGAGAAAGAGAACTAAAGC+GGG - chr4_3:23291499-23291518 None:intergenic 35.0%
AAGGGTTTACGGTCAAATTT+GGG - chr4_3:23291582-23291601 None:intergenic 35.0%
! TTTGGTGAAATCAATGGGTT+TGG - chr4_3:23291702-23291721 None:intergenic 35.0%
ACTTAGTGTTATCTGGGTAT+TGG + chr4_3:23291965-23291984 Msa0635110:intron 35.0%
GTAGGAATTAGAACTGAAAG+AGG + chr4_3:23292247-23292266 Msa0635110:intron 35.0%
!!! TAATGCAGAGCTGTTTTTGA+CGG + chr4_3:23292276-23292295 Msa0635110:intron 35.0%
GAATTATGGGACCAAAATAG+GGG + chr4_3:23292569-23292588 Msa0635110:intron 35.0%
CACTTAGTATTGCTGAATTG+AGG + chr4_3:23292606-23292625 Msa0635110:intron 35.0%
TGAAACCACTTAGAGCTTAT+AGG + chr4_3:23292829-23292848 Msa0635110:intron 35.0%
TAGAGCTTATAGGAAAGCAA+TGG + chr4_3:23292839-23292858 Msa0635110:intron 35.0%
AAAGACCAAAGCTACCAAAT+TGG + chr4_3:23292922-23292941 Msa0635110:intron 35.0%
ATCGAGATAGAGAATACAGA+GGG - chr4_3:23293005-23293024 None:intergenic 35.0%
AATACGAACTTAAGGAAACG+CGG - chr4_3:23293065-23293084 None:intergenic 35.0%
GTTCATGATTTCCAACTGTT+TGG + chr4_3:23293132-23293151 Msa0635110:intron 35.0%
TGATTTCCAACTGTTTGGTT+TGG + chr4_3:23293137-23293156 Msa0635110:intron 35.0%
! TTCGGTCAATTTTATGGGAT+TGG + chr4_3:23293214-23293233 Msa0635110:intron 35.0%
!!! CAAAAAAGTGCTGTTTTCAC+AGG + chr4_3:23293244-23293263 Msa0635110:intron 35.0%
TAGCAAAGGCCAAAAAGTAA+GGG - chr4_3:23293388-23293407 None:intergenic 35.0%
ATAGCAAAGGCCAAAAAGTA+AGG - chr4_3:23293389-23293408 None:intergenic 35.0%
GATTACTGAAGAATCGGAAA+AGG + chr4_3:23293487-23293506 Msa0635110:intron 35.0%
!! GTTACATTTTAGGAGAATGG+AGG + chr4_3:23293726-23293745 Msa0635110:intron 35.0%
! CTGTTTTCAGAACTAGTGAA+AGG + chr4_3:23293824-23293843 Msa0635110:CDS 35.0%
GCATCTTATATTAGTTAGGG+TGG + chr4_3:23293939-23293958 Msa0635110:intron 35.0%
CTTGAAGCTCATAAACTTCT+AGG + chr4_3:23294026-23294045 Msa0635110:intron 35.0%
GTGGTTACTTGTTTAATGCA+TGG + chr4_3:23294081-23294100 Msa0635110:intron 35.0%
GATGGTTAGTGACTATAACA+AGG - chr4_3:23294123-23294142 None:intergenic 35.0%
! TTTTCTCAATCAATGTCCAG+AGG + chr4_3:23294334-23294353 Msa0635110:CDS 35.0%
AGCAAGAATGAGCTAAAAGT+TGG - chr4_3:23294371-23294390 None:intergenic 35.0%
TTGACCAAATTGACTGTAGA+TGG + chr4_3:23294399-23294418 Msa0635110:CDS 35.0%
ACAACCATCTACAGTCAATT+TGG - chr4_3:23294406-23294425 None:intergenic 35.0%
AACTATGCTTAAGAGCCTAA+AGG - chr4_3:23294940-23294959 None:intergenic 35.0%
TTGAAGTAGGAAAACCTTGT+TGG - chr4_3:23295003-23295022 None:intergenic 35.0%
AATTCTCGTTGTCTTGAAGT+AGG - chr4_3:23295016-23295035 None:intergenic 35.0%
ACTAATACTCCCTCCTATAA+TGG + chr4_3:23295076-23295095 Msa0635110:intron 35.0%
GACTGTTCTCAATTCTAATG+TGG + chr4_3:23295148-23295167 Msa0635110:intron 35.0%
ATGCTATTGACCTACATTTC+AGG + chr4_3:23295210-23295229 Msa0635110:intron 35.0%
! AGTTACATGATTTGCAGAGA+AGG + chr4_3:23295244-23295263 Msa0635110:CDS 35.0%
! ATGATTTGCAGAGAAGGATT+TGG + chr4_3:23295250-23295269 Msa0635110:CDS 35.0%
GTTCAAACATAACCAACATG+TGG - chr4_3:23295856-23295875 None:intergenic 35.0%
! CATGTTGGTTATGTTTGAAC+AGG + chr4_3:23295856-23295875 Msa0635110:intron 35.0%
CAGGAACATTATGAACAGAT+TGG + chr4_3:23295875-23295894 Msa0635110:intron 35.0%
!! GTTCTGTTGTTATTTCTGAG+AGG + chr4_3:23295926-23295945 Msa0635110:CDS 35.0%
AAGGAAGAAGACACTGTTCT+TGG - chr4_3:23287692-23287711 None:intergenic 40.0%
!! AAAAGTGCTTTCAGCGTGTT+TGG - chr4_3:23287903-23287922 None:intergenic 40.0%
!!! TGAAAGCACTTTTCATGGAC+AGG + chr4_3:23287910-23287929 Msa0635110:five_prime_UTR 40.0%
TGGGAAATTGGTTGAAGACA+TGG - chr4_3:23288153-23288172 None:intergenic 40.0%
GTGTGAGTATGTGGAAATGA+GGG - chr4_3:23288239-23288258 None:intergenic 40.0%
AAACTCGAAAACCTCGAGTT+CGG + chr4_3:23288337-23288356 Msa0635110:five_prime_UTR 40.0%
TCCGCATTTCATCAAACAGT+TGG - chr4_3:23288573-23288592 None:intergenic 40.0%
!!! AATGCGGAGTGGTTTTGTTT+TGG + chr4_3:23288585-23288604 Msa0635110:five_prime_UTR 40.0%
GTGTGTGAATTTAGGGAAGT+TGG + chr4_3:23288639-23288658 Msa0635110:five_prime_UTR 40.0%
GTTGTAGTAATGTTGTTGCG+TGG + chr4_3:23288695-23288714 Msa0635110:five_prime_UTR 40.0%
GCGTGGAATGTTATGATTTC+TGG + chr4_3:23288712-23288731 Msa0635110:five_prime_UTR 40.0%
!! ATTTCTGGTCATGGTAAGAG+AGG + chr4_3:23288727-23288746 Msa0635110:five_prime_UTR 40.0%
GAGAGGTTATTATAAGGAGG+CGG + chr4_3:23288744-23288763 Msa0635110:five_prime_UTR 40.0%
ATGGTGAGGCGGTTAAATTA+GGG + chr4_3:23288881-23288900 Msa0635110:five_prime_UTR 40.0%
GTTTGAGTCGAGTGTTTATG+TGG + chr4_3:23288903-23288922 Msa0635110:five_prime_UTR 40.0%
!! GAGTTGTTCTCTGAGATGAT+GGG + chr4_3:23289072-23289091 Msa0635110:five_prime_UTR 40.0%
!! AGTTGTTCTCTGAGATGATG+GGG + chr4_3:23289073-23289092 Msa0635110:five_prime_UTR 40.0%
TAGAGTACGTAAACTCATCC+GGG - chr4_3:23289110-23289129 None:intergenic 40.0%
CTAGAGTACGTAAACTCATC+CGG - chr4_3:23289111-23289130 None:intergenic 40.0%
ATGCATGAACAATGCATTGG+TGG + chr4_3:23289221-23289240 Msa0635110:five_prime_UTR 40.0%
TGGATATGTATGCTAAGGCT+GGG + chr4_3:23289241-23289260 Msa0635110:five_prime_UTR 40.0%
TTTCGGAGAATGAATCGACA+TGG + chr4_3:23289381-23289400 Msa0635110:five_prime_UTR 40.0%
! CATGGCCTTACAGTTAAGTT+GGG + chr4_3:23289486-23289505 Msa0635110:five_prime_UTR 40.0%
! TTAGACACAAACCTTTTCGC+TGG + chr4_3:23289510-23289529 Msa0635110:five_prime_UTR 40.0%
TGACATGTATTCCAAGTGTG+GGG + chr4_3:23289545-23289564 Msa0635110:five_prime_UTR 40.0%
TCAATGAATGCTCTGATTGC+AGG + chr4_3:23289621-23289640 Msa0635110:five_prime_UTR 40.0%
TCTGCATGAGATGCAGATAT+TGG + chr4_3:23289680-23289699 Msa0635110:five_prime_UTR 40.0%
CTGCATGAGATGCAGATATT+GGG + chr4_3:23289681-23289700 Msa0635110:five_prime_UTR 40.0%
GAGGCAAATGTGATTTCAGA+TGG - chr4_3:23289714-23289733 None:intergenic 40.0%
CTTACAACAATCTATGAGGG+AGG - chr4_3:23289733-23289752 None:intergenic 40.0%
CTCCCTCATAGATTGTTGTA+AGG + chr4_3:23289731-23289750 Msa0635110:five_prime_UTR 40.0%
TTGTTGTAAGGAGTCTCCTA+AGG + chr4_3:23289743-23289762 Msa0635110:five_prime_UTR 40.0%
! GAGTCTCCTAAGGTGATTTT+AGG + chr4_3:23289753-23289772 Msa0635110:five_prime_UTR 40.0%
TGCATCCCTAAAATCACCTT+AGG - chr4_3:23289762-23289781 None:intergenic 40.0%
CGAGAAAAGAATGTTCGCTT+CGG - chr4_3:23289880-23289899 None:intergenic 40.0%
! CGAAGCGAACATTCTTTTCT+CGG + chr4_3:23289878-23289897 Msa0635110:five_prime_UTR 40.0%
! CTGTGGACAGCTTTAATATC+TGG + chr4_3:23289927-23289946 Msa0635110:five_prime_UTR 40.0%
! GTAACAAATGTTGCTTGGTC+TGG - chr4_3:23290023-23290042 None:intergenic 40.0%
GAACGGTAACAAATGTTGCT+TGG - chr4_3:23290028-23290047 None:intergenic 40.0%
! CACTCTCTGATTTTCCATAC+TGG + chr4_3:23290095-23290114 Msa0635110:five_prime_UTR 40.0%
CGAAAAATGGTTATGCGGAA+AGG + chr4_3:23290261-23290280 Msa0635110:five_prime_UTR 40.0%
TGGAACCCAATGCAATGATT+TGG + chr4_3:23290525-23290544 Msa0635110:five_prime_UTR 40.0%
GGAACCCAATGCAATGATTT+GGG + chr4_3:23290526-23290545 Msa0635110:five_prime_UTR 40.0%
GGGATGAAGCTAAATCTCTA+AGG + chr4_3:23290687-23290706 Msa0635110:five_prime_UTR 40.0%
ATGAAGTCCAAAAAAAGCCC+GGG + chr4_3:23290726-23290745 Msa0635110:five_prime_UTR 40.0%
GACAATAGATTGCAGGAAGA+TGG + chr4_3:23290863-23290882 Msa0635110:five_prime_UTR 40.0%
GTTTGTGGAAAGGGAAAGAA+AGG + chr4_3:23290988-23291007 Msa0635110:intron 40.0%
CTGTTTCATCTTTGCTTGGA+CGG + chr4_3:23291136-23291155 Msa0635110:CDS 40.0%
!! TTGGCACTTATGGTTTGGTT+TGG - chr4_3:23291433-23291452 None:intergenic 40.0%
GAACTAAAGCGGGATAGATT+TGG - chr4_3:23291489-23291508 None:intergenic 40.0%
!! GAACTGAGATTGGTTTGGTT+TGG - chr4_3:23291546-23291565 None:intergenic 40.0%
! AGAGAGAACTGAGATTGGTT+TGG - chr4_3:23291551-23291570 None:intergenic 40.0%
GAAGGGTTTACGGTCAAATT+TGG - chr4_3:23291583-23291602 None:intergenic 40.0%
! GATGGGAAATTTGGGTTTCA+CGG - chr4_3:23291627-23291646 None:intergenic 40.0%
TGGAGATGGATGGGAAATTT+GGG - chr4_3:23291635-23291654 None:intergenic 40.0%
TGGGTTTGGCTGAGAATATT+TGG - chr4_3:23291720-23291739 None:intergenic 40.0%
!!! AATGCAGAGCTGTTTTTGAC+GGG + chr4_3:23292277-23292296 Msa0635110:intron 40.0%
!! CTTTCTTGTCACTTTCACCA+CGG + chr4_3:23292341-23292360 Msa0635110:CDS 40.0%
! AAAGAGATGACGGCAGAAAA+CGG - chr4_3:23292395-23292414 None:intergenic 40.0%
TGTGTTGTGCAAAGAGATGA+CGG - chr4_3:23292405-23292424 None:intergenic 40.0%
ATCTCTTTGCACAACACAAC+AGG + chr4_3:23292407-23292426 Msa0635110:CDS 40.0%
! ACTACCAGAATCCCCTATTT+TGG - chr4_3:23292583-23292602 None:intergenic 40.0%
GACCTATTTGAGCTTATCTC+TGG + chr4_3:23292722-23292741 Msa0635110:intron 40.0%
AGCCAGAGATAAGCTCAAAT+AGG - chr4_3:23292727-23292746 None:intergenic 40.0%
!! GCTTTCCTATAAGCTCTAAG+TGG - chr4_3:23292837-23292856 None:intergenic 40.0%
! AAGGACCAATTTGGTAGCTT+TGG - chr4_3:23292930-23292949 None:intergenic 40.0%
TCGAGATAGAGAATACAGAG+GGG - chr4_3:23293004-23293023 None:intergenic 40.0%
CATCGAGATAGAGAATACAG+AGG - chr4_3:23293006-23293025 None:intergenic 40.0%
! AAGACTGAGGGTACAAAAGA+CGG - chr4_3:23293029-23293048 None:intergenic 40.0%
GGCAAGACAATACGAACTTA+AGG - chr4_3:23293073-23293092 None:intergenic 40.0%
AAGTTCGTATTGTCTTGCCA+TGG + chr4_3:23293074-23293093 Msa0635110:intron 40.0%
!! TTCCAACTGTTTGGTTTGGT+TGG + chr4_3:23293141-23293160 Msa0635110:intron 40.0%
TTCCAACCAAACCAAACAGT+TGG - chr4_3:23293146-23293165 None:intergenic 40.0%
!! CTGTTTGGTTTGGTTGGAAA+AGG + chr4_3:23293147-23293166 Msa0635110:intron 40.0%
TGACTCGTGCAACAATTGAT+AGG - chr4_3:23293188-23293207 None:intergenic 40.0%
TTGCACGAGTCATCTGATTT+CGG + chr4_3:23293196-23293215 Msa0635110:intron 40.0%
! TTTTCACAGGGATATTTCCC+TGG + chr4_3:23293257-23293276 Msa0635110:intron 40.0%
TTTCACAGGGATATTTCCCT+GGG + chr4_3:23293258-23293277 Msa0635110:intron 40.0%
AAATCCCTGGTAAATTTGCC+AGG + chr4_3:23293285-23293304 Msa0635110:intron 40.0%
TACTCCTGGCAAATTTACCA+GGG - chr4_3:23293292-23293311 None:intergenic 40.0%
TTACTCCTGGCAAATTTACC+AGG - chr4_3:23293293-23293312 None:intergenic 40.0%
GGGTTATGATATATTGCTCC+TGG - chr4_3:23293346-23293365 None:intergenic 40.0%
AGCAAAGGCCAAAAAGTAAG+GGG - chr4_3:23293387-23293406 None:intergenic 40.0%
TTGGGTGAGGTTAATAGCAA+AGG - chr4_3:23293402-23293421 None:intergenic 40.0%
AGGGGAACTTACTGAAGAAT+CGG + chr4_3:23293518-23293537 Msa0635110:intron 40.0%
TGTTCCAATTCATCCGATTG+TGG + chr4_3:23293762-23293781 Msa0635110:CDS 40.0%
AACACCACAATCGGATGAAT+TGG - chr4_3:23293769-23293788 None:intergenic 40.0%
AATTCATCCGATTGTGGTGT+TGG + chr4_3:23293768-23293787 Msa0635110:CDS 40.0%
AACAACTCCAACACCACAAT+CGG - chr4_3:23293778-23293797 None:intergenic 40.0%
TAGGGTGGTGAGATATGTAT+TGG + chr4_3:23293954-23293973 Msa0635110:intron 40.0%
CTTCTAGGTGTTCAAAATCG+TGG + chr4_3:23294062-23294081 Msa0635110:intron 40.0%
CAATCAATGTCCAGAGGATA+CGG + chr4_3:23294340-23294359 Msa0635110:CDS 40.0%
AATCAATGTCCAGAGGATAC+GGG + chr4_3:23294341-23294360 Msa0635110:CDS 40.0%
TGACTGTAGATGGTTGTGAA+AGG + chr4_3:23294409-23294428 Msa0635110:CDS 40.0%
GACTGTAGATGGTTGTGAAA+GGG + chr4_3:23294410-23294429 Msa0635110:CDS 40.0%
TTGTTAGACTTAGGGTCAGT+TGG + chr4_3:23294500-23294519 Msa0635110:intron 40.0%
TAAAATTTGTCGCACGTGCT+AGG - chr4_3:23294850-23294869 None:intergenic 40.0%
AAGTAGGAAAACCTTGTTGG+TGG - chr4_3:23295000-23295019 None:intergenic 40.0%
TCTTCCCTTGAGCTAAGTTT+GGG + chr4_3:23295111-23295130 Msa0635110:intron 40.0%
TCAACCCAAACTTAGCTCAA+GGG - chr4_3:23295118-23295137 None:intergenic 40.0%
!! AGCTAAGTTTGGGTTGAGAT+AGG + chr4_3:23295121-23295140 Msa0635110:intron 40.0%
ATGTAGGTCAATAGCATGTG+AGG - chr4_3:23295207-23295226 None:intergenic 40.0%
TTGAATGACACGATTAGCGT+AGG - chr4_3:23295665-23295684 None:intergenic 40.0%
AGTATTAATGGCCCACATGT+TGG + chr4_3:23295841-23295860 Msa0635110:intron 40.0%
!!! ATGAACAGATTGGCCTTTTC+TGG + chr4_3:23295885-23295904 Msa0635110:CDS 40.0%
!!! TGAACAGATTGGCCTTTTCT+GGG + chr4_3:23295886-23295905 Msa0635110:CDS 40.0%
GAAGAAGACACTGTTCTTGG+AGG - chr4_3:23287689-23287708 None:intergenic 45.0%
! TTGAAGGTGAAAAAGTGCGG+CGG + chr4_3:23287856-23287875 Msa0635110:five_prime_UTR 45.0%
!!! CACGCTGAAAGCACTTTTCA+TGG + chr4_3:23287905-23287924 Msa0635110:five_prime_UTR 45.0%
TGTTCACAGTTCCACTTGCT+CGG - chr4_3:23287992-23288011 None:intergenic 45.0%
GGTGTGAGTATGTGGAAATG+AGG - chr4_3:23288240-23288259 None:intergenic 45.0%
GAACTAACTTACCGAACTCG+AGG - chr4_3:23288351-23288370 None:intergenic 45.0%
ATTGGCGGTTATGTTCGTGT+TGG + chr4_3:23288529-23288548 Msa0635110:five_prime_UTR 45.0%
TTGGCGGTTATGTTCGTGTT+GGG + chr4_3:23288530-23288549 Msa0635110:five_prime_UTR 45.0%
CTGTTTGATGAAATGCGGAG+TGG + chr4_3:23288574-23288593 Msa0635110:five_prime_UTR 45.0%
TGAATGGTGTGATATCGTCG+AGG + chr4_3:23288791-23288810 Msa0635110:five_prime_UTR 45.0%
GATATCGTCGAGGTCTACAT+TGG + chr4_3:23288801-23288820 Msa0635110:five_prime_UTR 45.0%
!! ATTGGCGAGTGTTTTGAGTG+CGG + chr4_3:23288819-23288838 Msa0635110:five_prime_UTR 45.0%
!! GTTGCTGGTTTGGGTGATTT+GGG + chr4_3:23288841-23288860 Msa0635110:five_prime_UTR 45.0%
!! TTGCTGGTTTGGGTGATTTG+GGG + chr4_3:23288842-23288861 Msa0635110:five_prime_UTR 45.0%
!! TTTGTTGGTTCATGGTGAGG+CGG + chr4_3:23288870-23288889 Msa0635110:five_prime_UTR 45.0%
CATGGTGAGGCGGTTAAATT+AGG + chr4_3:23288880-23288899 Msa0635110:five_prime_UTR 45.0%
CTTGGAGTTTACGCACAGAA+TGG + chr4_3:23289030-23289049 Msa0635110:five_prime_UTR 45.0%
!! GGAGTTGTTCTCTGAGATGA+TGG + chr4_3:23289071-23289090 Msa0635110:five_prime_UTR 45.0%
GTGGATATGTATGCTAAGGC+TGG + chr4_3:23289240-23289259 Msa0635110:five_prime_UTR 45.0%
GGATATGTATGCTAAGGCTG+GGG + chr4_3:23289242-23289261 Msa0635110:five_prime_UTR 45.0%
TGGATACGTGCAAGAAGAAG+AGG + chr4_3:23289338-23289357 Msa0635110:five_prime_UTR 45.0%
!! TCCACAAGCACTGAGAATAC+TGG - chr4_3:23289433-23289452 None:intergenic 45.0%
CCAACTTAACTGTAAGGCCA+TGG - chr4_3:23289488-23289507 None:intergenic 45.0%
! CCATGGCCTTACAGTTAAGT+TGG + chr4_3:23289485-23289504 Msa0635110:five_prime_UTR 45.0%
TAAGAGAGCTTCCAGCGAAA+AGG - chr4_3:23289524-23289543 None:intergenic 45.0%
GACATGTATTCCAAGTGTGG+GGG + chr4_3:23289546-23289565 Msa0635110:five_prime_UTR 45.0%
TTTATTCTTGCATGCCCGAG+TGG + chr4_3:23289589-23289608 Msa0635110:five_prime_UTR 45.0%
!! TTATGCGGAAAGGGCATTGA+AGG + chr4_3:23290271-23290290 Msa0635110:five_prime_UTR 45.0%
GACTCTATCACCTGTTTCAC+CGG + chr4_3:23290307-23290326 Msa0635110:five_prime_UTR 45.0%
CCAAGGAATGTGACATCATC+CGG - chr4_3:23290329-23290348 None:intergenic 45.0%
!! CATACAGGGTTGGTTTCTGA+GGG + chr4_3:23290368-23290387 Msa0635110:five_prime_UTR 45.0%
TCTTGGCTGAATGCCGTAAT+AGG - chr4_3:23290420-23290439 None:intergenic 45.0%
CAAGCGTAGTGATCTACTCT+TGG - chr4_3:23290437-23290456 None:intergenic 45.0%
AGTAGATCACTACGCTTGCA+TGG + chr4_3:23290439-23290458 Msa0635110:five_prime_UTR 45.0%
GCTTGCATGGTTGATCTACT+TGG + chr4_3:23290452-23290471 Msa0635110:five_prime_UTR 45.0%
GTTGATCTACTTGGTCGATG+TGG + chr4_3:23290461-23290480 Msa0635110:five_prime_UTR 45.0%
TTGGGTGCTTGCAGTATACA+TGG + chr4_3:23290557-23290576 Msa0635110:five_prime_UTR 45.0%
TGAAAAAAGGGGACTGAGAG+CGG + chr4_3:23290583-23290602 Msa0635110:five_prime_UTR 45.0%
AACTACAATCCAGCTACACC+CGG - chr4_3:23290747-23290766 None:intergenic 45.0%
ACTAGGATGTGACATATCGC+TGG - chr4_3:23290795-23290814 None:intergenic 45.0%
!! TTCACATGCTTTGAAGCACC+TGG + chr4_3:23290826-23290845 Msa0635110:five_prime_UTR 45.0%
GCAGGAAGATGGAATTTCAC+AGG + chr4_3:23290874-23290893 Msa0635110:five_prime_UTR 45.0%
TTGCTTGGACGGTTTCTTTC+AGG + chr4_3:23291147-23291166 Msa0635110:intron 45.0%
! GTTTGGCGCTGAATTGGTTT+GGG - chr4_3:23291529-23291548 None:intergenic 45.0%
GAGAGAGAGAGAACTGAGAT+TGG - chr4_3:23291556-23291575 None:intergenic 45.0%
AAGCTGTGACGAAGGGTTTA+CGG - chr4_3:23291593-23291612 None:intergenic 45.0%
! GGAAATTTGGGTTTCACGGT+GGG - chr4_3:23291623-23291642 None:intergenic 45.0%
GTGGAGATGGATGGGAAATT+TGG - chr4_3:23291636-23291655 None:intergenic 45.0%
GGTGAAATCGAAGGGTTTCA+CGG - chr4_3:23291661-23291680 None:intergenic 45.0%
GGTGGTGAAGCTTCTAACAA+CGG - chr4_3:23291772-23291791 None:intergenic 45.0%
!! CGAAGTTAGCTTTGCTCGAT+GGG - chr4_3:23291801-23291820 None:intergenic 45.0%
!! TCGAAGTTAGCTTTGCTCGA+TGG - chr4_3:23291802-23291821 None:intergenic 45.0%
ATTCATGTGATCTCCAGCGT+TGG + chr4_3:23292300-23292319 Msa0635110:intron 45.0%
TTCATGTGATCTCCAGCGTT+GGG + chr4_3:23292301-23292320 Msa0635110:intron 45.0%
GACAAGAAAGGAGCTGAGAA+GGG - chr4_3:23292331-23292350 None:intergenic 45.0%
TGACAAGAAAGGAGCTGAGA+AGG - chr4_3:23292332-23292351 None:intergenic 45.0%
CGTGGTGAAAGTGACAAGAA+AGG - chr4_3:23292343-23292362 None:intergenic 45.0%
TTCACAGGGATATTTCCCTG+GGG + chr4_3:23293259-23293278 Msa0635110:intron 45.0%
ATATGACAGGGTCTTACTCC+TGG - chr4_3:23293306-23293325 None:intergenic 45.0%
GGGCCCTTTCAATTTGTCAA+GGG - chr4_3:23293366-23293385 None:intergenic 45.0%
GCAAAGGCCAAAAAGTAAGG+GGG - chr4_3:23293386-23293405 None:intergenic 45.0%
! AATCGGAAAAGGCGAGTTGA+AGG + chr4_3:23293498-23293517 Msa0635110:intron 45.0%
! ATCGGAAAAGGCGAGTTGAA+GGG + chr4_3:23293499-23293518 Msa0635110:intron 45.0%
TCGCACGTGCTAGGATAATT+TGG - chr4_3:23294841-23294860 None:intergenic 45.0%
CAAACTTAGCTCAAGGGAAG+AGG - chr4_3:23295112-23295131 None:intergenic 45.0%
CTCTTCCCTTGAGCTAAGTT+TGG + chr4_3:23295110-23295129 Msa0635110:intron 45.0%
CTCAACCCAAACTTAGCTCA+AGG - chr4_3:23295119-23295138 None:intergenic 45.0%
TACTCTGCATGCTTGTGTTC+AGG + chr4_3:23295318-23295337 Msa0635110:CDS 45.0%
!!! GAACAGATTGGCCTTTTCTG+GGG + chr4_3:23295887-23295906 Msa0635110:CDS 45.0%
!!! AAATGATTTTTTAATAATAT+TGG - chr4_3:23295453-23295472 None:intergenic 5.0%
TGGAGGAGAGAAGACACTGA+CGG - chr4_3:23287672-23287691 None:intergenic 50.0%
!! CGCTTTTGAGTGTTCTCGTG+CGG + chr4_3:23287936-23287955 Msa0635110:five_prime_UTR 50.0%
!! AGTGTTTTGAGTGCGGTTGC+TGG + chr4_3:23288826-23288845 Msa0635110:five_prime_UTR 50.0%
! TTTGAGTGCGGTTGCTGGTT+TGG + chr4_3:23288831-23288850 Msa0635110:five_prime_UTR 50.0%
!! TTGAGTGCGGTTGCTGGTTT+GGG + chr4_3:23288832-23288851 Msa0635110:five_prime_UTR 50.0%
!! GGTTGCTGGTTTGGGTGATT+TGG + chr4_3:23288840-23288859 Msa0635110:five_prime_UTR 50.0%
! TGGTTTGGGTGATTTGGGGT+GGG + chr4_3:23288846-23288865 Msa0635110:five_prime_UTR 50.0%
! TGATTTGGGGTGGGGTTTGT+TGG + chr4_3:23288855-23288874 Msa0635110:five_prime_UTR 50.0%
!! GGGTTTGTTGGTTCATGGTG+AGG + chr4_3:23288867-23288886 Msa0635110:five_prime_UTR 50.0%
!! TTCTCTGAGATGATGGGGTG+TGG + chr4_3:23289078-23289097 Msa0635110:five_prime_UTR 50.0%
GAATCGACATGGCGTAGTAC+CGG + chr4_3:23289392-23289411 Msa0635110:five_prime_UTR 50.0%
GCCAGTATTCTCAGTGCTTG+TGG + chr4_3:23289429-23289448 Msa0635110:five_prime_UTR 50.0%
ATCTTCGATTCCCCCACACT+TGG - chr4_3:23289559-23289578 None:intergenic 50.0%
ATTGAGACCACACTCCACTC+GGG - chr4_3:23289606-23289625 None:intergenic 50.0%
CATTGAGACCACACTCCACT+CGG - chr4_3:23289607-23289626 None:intergenic 50.0%
CTCTTATCCTCGCTGCAAGA+CGG + chr4_3:23290062-23290081 Msa0635110:five_prime_UTR 50.0%
!! CATATCTACAAGGGCACTGC+TGG - chr4_3:23290141-23290160 None:intergenic 50.0%
GTGACATCATCCGGTGAAAC+AGG - chr4_3:23290320-23290339 None:intergenic 50.0%
CCGGATGATGTCACATTCCT+TGG + chr4_3:23290326-23290345 Msa0635110:five_prime_UTR 50.0%
TCACTGCCTGTAGCCATACA+GGG + chr4_3:23290354-23290373 Msa0635110:five_prime_UTR 50.0%
AACCAACCCTGTATGGCTAC+AGG - chr4_3:23290363-23290382 None:intergenic 50.0%
CCTCAGAAACCAACCCTGTA+TGG - chr4_3:23290370-23290389 None:intergenic 50.0%
!! CCATACAGGGTTGGTTTCTG+AGG + chr4_3:23290367-23290386 Msa0635110:five_prime_UTR 50.0%
TGCATGCTGGATCAGGACAT+TGG + chr4_3:23290666-23290685 Msa0635110:five_prime_UTR 50.0%
GCATGCTGGATCAGGACATT+GGG + chr4_3:23290667-23290686 Msa0635110:five_prime_UTR 50.0%
!!! AGCTACACCCGGGCTTTTTT+TGG - chr4_3:23290736-23290755 None:intergenic 50.0%
AAAAAAAGCCCGGGTGTAGC+TGG + chr4_3:23290735-23290754 Msa0635110:five_prime_UTR 50.0%
ACTACAATCCAGCTACACCC+GGG - chr4_3:23290746-23290765 None:intergenic 50.0%
TGTCTCTCATTAGTGCTGCC+AGG - chr4_3:23290847-23290866 None:intergenic 50.0%
CGGTTTCTTTCAGGCTTGTG+AGG + chr4_3:23291156-23291175 Msa0635110:intron 50.0%
TCTTTCAGGCTTGTGAGGTC+AGG + chr4_3:23291161-23291180 Msa0635110:intron 50.0%
! GGTTTGGCGCTGAATTGGTT+TGG - chr4_3:23291530-23291549 None:intergenic 50.0%
!! GGTTTGGTTTGGCGCTGAAT+TGG - chr4_3:23291422-23291441 None:intergenic 50.0%
CAAGGAGAAGCTGTGACGAA+GGG - chr4_3:23291600-23291619 None:intergenic 50.0%
! GGGAAATTTGGGTTTCACGG+TGG - chr4_3:23291624-23291643 None:intergenic 50.0%
GAAATCGAAGGGTTTCACGG+TGG - chr4_3:23291658-23291677 None:intergenic 50.0%
GTGACGGTGGTGAAATCGAA+GGG - chr4_3:23291669-23291688 None:intergenic 50.0%
TGTGACGGTGGTGAAATCGA+AGG - chr4_3:23291670-23291689 None:intergenic 50.0%
GTTTGGCTGAGAAGCTGTGA+CGG - chr4_3:23291685-23291704 None:intergenic 50.0%
! ACGGTAGTGATCGATGGGTT+TGG - chr4_3:23291734-23291753 None:intergenic 50.0%
GAAGCACGGTAGTGATCGAT+GGG - chr4_3:23291739-23291758 None:intergenic 50.0%
! AGAAGCACGGTAGTGATCGA+TGG - chr4_3:23291740-23291759 None:intergenic 50.0%
GCTTCTAACAACGGTGGTGA+CGG - chr4_3:23291763-23291782 None:intergenic 50.0%
GGTGAAGCTTCTAACAACGG+TGG - chr4_3:23291769-23291788 None:intergenic 50.0%
ACGGCGACAATGAGAGTTGA+CGG - chr4_3:23292368-23292387 None:intergenic 50.0%
GACGGCAGAAAACGGTTTCA+CGG - chr4_3:23292387-23292406 None:intergenic 50.0%
GGGACCAAAATAGGGGATTC+TGG + chr4_3:23292576-23292595 Msa0635110:intron 50.0%
! CTCTGGCTTATGCACTTGTG+AGG + chr4_3:23292739-23292758 Msa0635110:intron 50.0%
!! GAATACAGAGGGGAGCATCA+CGG - chr4_3:23292994-23293013 None:intergenic 50.0%
TTCGAGGTGGAGAAGACTGA+GGG - chr4_3:23293041-23293060 None:intergenic 50.0%
TAAGACCCTGTCATATCCCC+TGG + chr4_3:23293310-23293329 Msa0635110:intron 50.0%
GCAAACCAGGGGATATGACA+GGG - chr4_3:23293318-23293337 None:intergenic 50.0%
TGCAAACCAGGGGATATGAC+AGG - chr4_3:23293319-23293338 None:intergenic 50.0%
TCCTGGCAAATGCAAACCAG+GGG - chr4_3:23293329-23293348 None:intergenic 50.0%
CTCCTGGCAAATGCAAACCA+GGG - chr4_3:23293330-23293349 None:intergenic 50.0%
GGGGCCCTTTCAATTTGTCA+AGG - chr4_3:23293367-23293386 None:intergenic 50.0%
!! GAAAGGGCCCCCTTACTTTT+TGG + chr4_3:23293376-23293395 Msa0635110:intron 50.0%
! TCGGAAAAGGCGAGTTGAAG+GGG + chr4_3:23293500-23293519 Msa0635110:intron 50.0%
ATGTGAGGCACGTCAACATC+AGG - chr4_3:23295192-23295211 None:intergenic 50.0%
GACACGATTAGCGTAGGTAC+TGG - chr4_3:23295659-23295678 None:intergenic 50.0%
GAGCTGCAATACCCCAGAAA+AGG - chr4_3:23295901-23295920 None:intergenic 50.0%
! AAGGTGAAAAAGTGCGGCGG+CGG + chr4_3:23287859-23287878 Msa0635110:five_prime_UTR 55.0%
TTCTCGTGCGGCTGCATTAG+TGG + chr4_3:23287948-23287967 Msa0635110:five_prime_UTR 55.0%
TCACAGTTCCACTTGCTCGG+CGG - chr4_3:23287989-23288008 None:intergenic 55.0%
! AACGGTTTCGAGTGCGACGT+GGG - chr4_3:23288194-23288213 None:intergenic 55.0%
!! CTGGTTTGGGTGATTTGGGG+TGG + chr4_3:23288845-23288864 Msa0635110:five_prime_UTR 55.0%
! GGTTTGGGTGATTTGGGGTG+GGG + chr4_3:23288847-23288866 Msa0635110:five_prime_UTR 55.0%
!! GGGTGGGGTTTGTTGGTTCA+TGG + chr4_3:23288862-23288881 Msa0635110:five_prime_UTR 55.0%
! TGCTAAGGCTGGGGCTTTGA+AGG + chr4_3:23289251-23289270 Msa0635110:five_prime_UTR 55.0%
! AGTACCGGACGAGGTATGCA+TGG + chr4_3:23289407-23289426 Msa0635110:five_prime_UTR 55.0%
GAAGCAGGACTGCAGTTCCA+TGG + chr4_3:23289468-23289487 Msa0635110:five_prime_UTR 55.0%
GGGAATCGAAGATGCGCGTA+AGG + chr4_3:23289566-23289585 Msa0635110:five_prime_UTR 55.0%
TACAGGCAGTGAGCACTCCA+AGG - chr4_3:23290346-23290365 None:intergenic 55.0%
CTCACTGCCTGTAGCCATAC+AGG + chr4_3:23290353-23290372 Msa0635110:five_prime_UTR 55.0%
TGCCTGTAGCCATACAGGGT+TGG + chr4_3:23290358-23290377 Msa0635110:five_prime_UTR 55.0%
!! CAGGGTTGGTTTCTGAGGGT+CGG + chr4_3:23290372-23290391 Msa0635110:five_prime_UTR 55.0%
GCAAGGAGAAGCTGTGACGA+AGG - chr4_3:23291601-23291620 None:intergenic 55.0%
! TTTGGGTTTCACGGTGGGCA+AGG - chr4_3:23291618-23291637 None:intergenic 55.0%
!! TCACGGTGGTGGAGATGGAT+GGG - chr4_3:23291644-23291663 None:intergenic 55.0%
!! TTCACGGTGGTGGAGATGGA+TGG - chr4_3:23291645-23291664 None:intergenic 55.0%
ATCGAAGGGTTTCACGGTGG+TGG - chr4_3:23291655-23291674 None:intergenic 55.0%
GCTTTGCTCGATGGGTGTGA+CGG - chr4_3:23291793-23291812 None:intergenic 55.0%
! GAGAAGGGTTTTCCCAACGC+TGG - chr4_3:23292316-23292335 None:intergenic 55.0%
CAATGAGAGTTGACGGTCCG+TGG - chr4_3:23292361-23292380 None:intergenic 55.0%
CTTCGAGGTGGAGAAGACTG+AGG - chr4_3:23293042-23293061 None:intergenic 55.0%
CTTAAGGAAACGCGGCTTCG+AGG - chr4_3:23293057-23293076 None:intergenic 55.0%
TACCAGGGATTTCTGCCCCA+GGG - chr4_3:23293277-23293296 None:intergenic 55.0%
TTACCAGGGATTTCTGCCCC+AGG - chr4_3:23293278-23293297 None:intergenic 55.0%
! TCCCCTGGTTTGCATTTGCC+AGG + chr4_3:23293325-23293344 Msa0635110:intron 55.0%
GCTCCTGGCAAATGCAAACC+AGG - chr4_3:23293331-23293350 None:intergenic 55.0%
!! CGGTGACTAGAGCGCTTTTC+TGG + chr4_3:23293538-23293557 Msa0635110:intron 55.0%
GTTGGTCATCCCGTATCCTC+TGG - chr4_3:23294353-23294372 None:intergenic 55.0%
!! AAGTTGGTGCGCCACCAACA+AGG + chr4_3:23294986-23295005 Msa0635110:intron 55.0%
AGGCACGTCAACATCAGGTG+TGG - chr4_3:23295187-23295206 None:intergenic 55.0%
!! CTGGGGTATTGCAGCTCTGA+TGG + chr4_3:23295904-23295923 Msa0635110:CDS 55.0%
CGGCGGCGGTAAGTTGTTGT+TGG + chr4_3:23287873-23287892 Msa0635110:five_prime_UTR 60.0%
AAAATCCGCCGCCGAGCAAG+TGG + chr4_3:23287978-23287997 Msa0635110:five_prime_UTR 60.0%
! CAACGGTTTCGAGTGCGACG+TGG - chr4_3:23288195-23288214 None:intergenic 60.0%
GATGGGGTGTGGCAATGACC+CGG + chr4_3:23289089-23289108 Msa0635110:five_prime_UTR 60.0%
! ACATGGCGTAGTACCGGACG+AGG + chr4_3:23289398-23289417 Msa0635110:five_prime_UTR 60.0%
CTGGCCATGCATACCTCGTC+CGG - chr4_3:23289414-23289433 None:intergenic 60.0%
TTGCATGCCCGAGTGGAGTG+TGG + chr4_3:23289596-23289615 Msa0635110:five_prime_UTR 60.0%
! CAGCGAGGATAAGAGCGCAC+AGG - chr4_3:23290057-23290076 None:intergenic 60.0%
CTCTTGACCGTCTTGCAGCG+AGG - chr4_3:23290072-23290091 None:intergenic 60.0%
!! GGGTTTCACGGTGGTGGAGA+TGG - chr4_3:23291649-23291668 None:intergenic 60.0%
TGGCTGAGAAGCTGTGACGG+TGG - chr4_3:23291682-23291701 None:intergenic 60.0%
!! ACGGTGGTGACGGAGAAGCA+CGG - chr4_3:23291753-23291772 None:intergenic 60.0%
TTGCTCGATGGGTGTGACGG+TGG - chr4_3:23291790-23291809 None:intergenic 60.0%
AAGGAAACGCGGCTTCGAGG+TGG - chr4_3:23293054-23293073 None:intergenic 60.0%
TTCCCTGGGGCAGAAATCCC+TGG + chr4_3:23293272-23293291 Msa0635110:intron 60.0%
CAGTTCCACTTGCTCGGCGG+CGG - chr4_3:23287986-23288005 None:intergenic 65.0%
GAGCGCACAGGCTCGCAGAA+CGG - chr4_3:23290045-23290064 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 23287661 23296037 23287661 ID=Msa0635110;Name=Msa0635110
chr4_3 mRNA 23287661 23296037 23287661 ID=Msa0635110-mRNA-1;Parent=Msa0635110;Name=Msa0635110-mRNA-1;_AED=0.07;_eAED=0.07;_QI=3262|0.66|0.57|1|0.5|0.57|7|67|194
chr4_3 exon 23287661 23290943 23287661 ID=Msa0635110-mRNA-1:exon:6004;Parent=Msa0635110-mRNA-1
chr4_3 exon 23291130 23291157 23291130 ID=Msa0635110-mRNA-1:exon:6005;Parent=Msa0635110-mRNA-1
chr4_3 exon 23292317 23292428 23292317 ID=Msa0635110-mRNA-1:exon:6006;Parent=Msa0635110-mRNA-1
chr4_3 exon 23293738 23293845 23293738 ID=Msa0635110-mRNA-1:exon:6007;Parent=Msa0635110-mRNA-1
chr4_3 exon 23294317 23294431 23294317 ID=Msa0635110-mRNA-1:exon:6008;Parent=Msa0635110-mRNA-1
chr4_3 exon 23295232 23295339 23295232 ID=Msa0635110-mRNA-1:exon:6009;Parent=Msa0635110-mRNA-1
chr4_3 exon 23295878 23296037 23295878 ID=Msa0635110-mRNA-1:exon:6010;Parent=Msa0635110-mRNA-1
chr4_3 five_prime_UTR 23287661 23290922 23287661 ID=Msa0635110-mRNA-1:five_prime_utr;Parent=Msa0635110-mRNA-1
chr4_3 CDS 23290923 23290943 23290923 ID=Msa0635110-mRNA-1:cds;Parent=Msa0635110-mRNA-1
chr4_3 CDS 23291130 23291157 23291130 ID=Msa0635110-mRNA-1:cds;Parent=Msa0635110-mRNA-1
chr4_3 CDS 23292317 23292428 23292317 ID=Msa0635110-mRNA-1:cds;Parent=Msa0635110-mRNA-1
chr4_3 CDS 23293738 23293845 23293738 ID=Msa0635110-mRNA-1:cds;Parent=Msa0635110-mRNA-1
chr4_3 CDS 23294317 23294431 23294317 ID=Msa0635110-mRNA-1:cds;Parent=Msa0635110-mRNA-1
chr4_3 CDS 23295232 23295339 23295232 ID=Msa0635110-mRNA-1:cds;Parent=Msa0635110-mRNA-1
chr4_3 CDS 23295878 23295970 23295878 ID=Msa0635110-mRNA-1:cds;Parent=Msa0635110-mRNA-1
chr4_3 three_prime_UTR 23295971 23296037 23295971 ID=Msa0635110-mRNA-1:three_prime_utr;Parent=Msa0635110-mRNA-1
Gene Sequence

>Msa0635110

ATGGGAACAGAGAGAAAAGATGAGATTCTGTTTCATCTTTGCTTGGACGCGTTGGGAAAACCCTTCTCAGCTCCTTTCTTGTCACTTTCACCACGGACCGTCAACTCTCATTGTCGCCGTGAAACCGTTTTCTGCCGTCATCTCTTTGCACAACACAACAGGAGAATGGAGGCAGATTCATCAACTGTTCCAATTCATCCGATTGTGGTGTTGGAGTTGTTGAAAATTTTGTTGGAGAATGCTGGAGCTGTTTTCAGAACTAGTGAAAGTTTGGAGACATTGAAACTTTTCTCAATCAATGTCCAGAGGATACGGGATGACCAACTTTTAGCTCATTCTTGCTTTCAAAATTTGACCAAATTGACTGTAGATGGTTGTGAAAGGGAATTTGATAGAAGTTACATGATTTGCAGAGAAGGATTTGGTCGATTGTCACTGAATTTGATCGATTTCTCATTGGATTTTGTCGATACTCTGCATGCTTGTGTTCAGGAACATTATGAACAGATTGGCCTTTTCTGGGGTATTGCAGCTCTGATGGTTCTGTTGTTATTTCTGAGAGGGTCAAACATTTTAACGAGTTAA
Protein sequence

>Msa0635110

MGTERKDEILFHLCLDALGKPFSAPFLSLSPRTVNSHCRRETVFCRHLFAQHNRRMEADSSTVPIHPIVVLELLKILLENAGAVFRTSESLETLKLFSINVQRIRDDQLLAHSCFQNLTKLTVDGCEREFDRSYMICREGFGRLSLNLIDFSLDFVDTLHACVQEHYEQIGLFWGIAALMVLLLFLRGSNILTS*