Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0635140 | XP_013455242.1 | 98.581 | 916 | 11 | 1 | 1 | 914 | 1 | 916 | 0.0 | 1882 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0635140 | sp|Q7XZU3|SAC1_ARATH | 75.490 | 918 | 214 | 6 | 1 | 914 | 1 | 911 | 0.0 | 1441 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0635140 | A0A072UJJ8 | 98.581 | 916 | 11 | 1 | 1 | 914 | 1 | 916 | 0.0 | 1882 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0635140 | Msa1425890 | 0.804285 | 2.324204e-49 | -8.615850e-47 |
Msa0539310 | Msa0635140 | 0.913046 | 9.684324e-84 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0635140 | MtrunA17_Chr4g0014511 | 98.581 | 916 | 11 | 1 | 1 | 914 | 1 | 916 | 0.0 | 1882 |
Msa0635140 | MtrunA17_Chr4g0069981 | 47.481 | 794 | 358 | 13 | 21 | 795 | 10 | 763 | 0.0 | 723 |
Msa0635140 | MtrunA17_Chr8g0344911 | 53.895 | 629 | 267 | 6 | 40 | 659 | 32 | 646 | 0.0 | 681 |
Msa0635140 | MtrunA17_Chr5g0406801 | 29.967 | 307 | 187 | 10 | 111 | 409 | 63 | 349 | 3.54e-30 | 127 |
Msa0635140 | MtrunA17_Chr5g0406801 | 35.659 | 129 | 81 | 2 | 511 | 638 | 389 | 516 | 1.91e-14 | 77.4 |
Msa0635140 | MtrunA17_Chr4g0045791 | 25.051 | 487 | 262 | 18 | 128 | 583 | 93 | 507 | 2.27e-24 | 110 |
Msa0635140 | MtrunA17_Chr7g0242661 | 30.052 | 193 | 117 | 4 | 246 | 438 | 10 | 184 | 1.45e-13 | 73.9 |
Msa0635140 | MtrunA17_Chr7g0242661 | 29.197 | 137 | 95 | 2 | 511 | 646 | 196 | 331 | 2.02e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0635140 | AT1G22620.1 | 75.490 | 918 | 214 | 6 | 1 | 914 | 1 | 911 | 0.0 | 1441 |
Msa0635140 | AT3G14205.1 | 53.155 | 634 | 283 | 4 | 32 | 662 | 11 | 633 | 0.0 | 701 |
Msa0635140 | AT3G43220.2 | 52.039 | 613 | 283 | 3 | 36 | 647 | 11 | 613 | 0.0 | 661 |
Msa0635140 | AT3G43220.1 | 52.039 | 613 | 283 | 3 | 36 | 647 | 11 | 613 | 0.0 | 661 |
Msa0635140 | AT3G43220.3 | 52.039 | 613 | 283 | 3 | 36 | 647 | 11 | 613 | 0.0 | 661 |
Msa0635140 | AT5G20840.1 | 45.925 | 773 | 375 | 11 | 39 | 800 | 23 | 763 | 0.0 | 660 |
Msa0635140 | AT1G17340.1 | 42.911 | 790 | 382 | 13 | 39 | 820 | 18 | 746 | 0.0 | 609 |
Msa0635140 | AT3G14205.2 | 53.305 | 469 | 205 | 4 | 197 | 662 | 1 | 458 | 1.19e-169 | 508 |
Msa0635140 | AT3G51830.1 | 28.135 | 327 | 211 | 8 | 102 | 423 | 52 | 359 | 6.03e-32 | 132 |
Msa0635140 | AT3G51830.1 | 34.351 | 131 | 84 | 2 | 511 | 640 | 385 | 514 | 3.25e-14 | 77.0 |
Msa0635140 | AT3G51460.1 | 28.972 | 321 | 200 | 10 | 111 | 423 | 62 | 362 | 4.87e-31 | 130 |
Msa0635140 | AT3G51460.1 | 36.585 | 123 | 76 | 2 | 511 | 632 | 388 | 509 | 6.32e-14 | 76.3 |
Msa0635140 | AT5G66020.1 | 26.620 | 432 | 259 | 15 | 94 | 503 | 44 | 439 | 2.55e-30 | 127 |
Msa0635140 | AT5G66020.1 | 34.959 | 123 | 78 | 2 | 511 | 632 | 386 | 507 | 5.03e-13 | 73.6 |
Msa0635140 | AT3G59770.1 | 24.092 | 523 | 311 | 19 | 53 | 548 | 25 | 488 | 4.01e-22 | 103 |
Msa0635140 | AT3G59770.3 | 24.092 | 523 | 311 | 19 | 53 | 548 | 25 | 488 | 4.34e-22 | 103 |
Msa0635140 | AT3G59770.4 | 24.351 | 308 | 172 | 9 | 260 | 548 | 20 | 285 | 1.89e-14 | 78.6 |
Msa0635140 | AT3G59770.2 | 23.934 | 305 | 171 | 9 | 263 | 548 | 1 | 263 | 2.59e-13 | 75.1 |
Find 222 sgRNAs with CRISPR-Local
Find 765 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGAAGCCAGGTGGAGTTTC+TGG | 0.162709 | 4_3:+23334897 | Msa0635140:CDS |
ATCAAATTAAGAACAATAAT+TGG | 0.188213 | 4_3:-23330593 | None:intergenic |
GAACCAAATCTTAACTCTTC+TGG | 0.212025 | 4_3:+23334738 | Msa0635140:CDS |
ATGATTGGAAGGGTGAATTT+TGG | 0.224147 | 4_3:-23325230 | None:intergenic |
TGTTCCATTGCCAGATTCTT+AGG | 0.232529 | 4_3:+23334103 | Msa0635140:intron |
GGCTCTCTGCTGGTAGAATT+TGG | 0.233290 | 4_3:-23331784 | None:intergenic |
CAGGCTCGCTTATCGATCTT+TGG | 0.233312 | 4_3:+23329861 | Msa0635140:intron |
TGTGGTGGTTGGGAGGGGTT+AGG | 0.247302 | 4_3:-23325077 | None:intergenic |
TTTGCAAACTTTGCATTATA+GGG | 0.252847 | 4_3:-23327585 | None:intergenic |
TGGTTGACGAGGTGGTTAAT+TGG | 0.279765 | 4_3:+23337148 | Msa0635140:CDS |
AATGGATATGTATCAAAGTA+TGG | 0.291152 | 4_3:+23333463 | Msa0635140:CDS |
GTGGTGGTTGGGAGGGGTTA+GGG | 0.300470 | 4_3:-23325076 | None:intergenic |
TCTCAGCAAGGTCTTCAAAA+TGG | 0.305413 | 4_3:-23330559 | None:intergenic |
GATTATTATCTCCATGTATC+TGG | 0.306301 | 4_3:+23334175 | Msa0635140:CDS |
TGGTGGTTGGGAGGGGTTAG+GGG | 0.307137 | 4_3:-23325075 | None:intergenic |
CCCAGGATATGATGAGCTTT+TGG | 0.320073 | 4_3:+23337184 | Msa0635140:exon |
CTCCCAGAAGAGTTAAGATT+TGG | 0.320079 | 4_3:-23334741 | None:intergenic |
GCTTATGGCCTACAAGCTTT+AGG | 0.323564 | 4_3:+23333368 | Msa0635140:CDS |
AGGAAGGAAAACCTGCTCTA+TGG | 0.327309 | 4_3:+23334140 | Msa0635140:CDS |
TTATGTAACACGATAATAAC+TGG | 0.328451 | 4_3:-23337452 | None:intergenic |
TACAGCTTAAAAGCCCAAAT+TGG | 0.331586 | 4_3:+23336041 | Msa0635140:CDS |
TGGACTATAGCTTTGGTTCA+TGG | 0.334779 | 4_3:+23327712 | Msa0635140:CDS |
AAGCAAGTCGGCCAATGTTT+TGG | 0.336471 | 4_3:+23331958 | Msa0635140:intron |
AGAGATCTGACAGCTAGTTC+TGG | 0.339935 | 4_3:+23333161 | Msa0635140:CDS |
TAGTATTGCAGCAGCTCTAA+TGG | 0.348394 | 4_3:+23333445 | Msa0635140:CDS |
GTTTGCCCTCTTTACGATGT+TGG | 0.352529 | 4_3:-23332044 | None:intergenic |
TTAGCATATATATATTAGTT+AGG | 0.352730 | 4_3:+23337385 | Msa0635140:three_prime_UTR |
GTTACTAAGCGCAGACAAAT+TGG | 0.355249 | 4_3:+23327303 | Msa0635140:CDS |
TTCCACTTTCCCTGCCTCTC+TGG | 0.358086 | 4_3:-23333656 | None:intergenic |
GGTTGACGAGGTGGTTAATT+GGG | 0.358437 | 4_3:+23337149 | Msa0635140:CDS |
TTACAAATTATGTCAGGCTT+AGG | 0.358704 | 4_3:-23330399 | None:intergenic |
CTACTGTCAGGATCCACTTT+TGG | 0.359333 | 4_3:-23333425 | None:intergenic |
GAAGACCTTGCTGAGAGATA+TGG | 0.363605 | 4_3:+23330566 | Msa0635140:CDS |
TTTGCCCTCTTTACGATGTT+GGG | 0.369497 | 4_3:-23332043 | None:intergenic |
AACCTTCTTCATACTTTCTC+TGG | 0.369565 | 4_3:-23336072 | None:intergenic |
TGAAAGCTTGCATTAATAAG+AGG | 0.373279 | 4_3:-23337520 | None:intergenic |
GGTTGGTGGTTGAGACTTGT+AGG | 0.377831 | 4_3:-23324999 | None:intergenic |
AACCAAATCTTAACTCTTCT+GGG | 0.378330 | 4_3:+23334739 | Msa0635140:CDS |
AGGCTCGCTTATCGATCTTT+GGG | 0.382228 | 4_3:+23329862 | Msa0635140:intron |
CGGTGTTGTGGTGGTTGGGA+GGG | 0.387749 | 4_3:-23325083 | None:intergenic |
GCCATCTTAGATTTATTCAC+TGG | 0.391372 | 4_3:+23331804 | Msa0635140:CDS |
CACCATATGGACTATAGCTT+TGG | 0.397838 | 4_3:+23327705 | Msa0635140:CDS |
TCGGAGAATTCAATGGGATT+AGG | 0.403901 | 4_3:+23325175 | Msa0635140:CDS |
GGTGGTTGGGAGGGGTTAGG+GGG | 0.404536 | 4_3:-23325074 | None:intergenic |
ACTCCACCTGGCTTCTGATC+AGG | 0.406651 | 4_3:-23334891 | None:intergenic |
TGCGTCGGTGTTGTGGTGGT+TGG | 0.406918 | 4_3:-23325088 | None:intergenic |
TAGGAAGAAGGATCGAGTTC+TGG | 0.407390 | 4_3:-23325256 | None:intergenic |
GCTCTCTTTCATGATCATCT+TGG | 0.409234 | 4_3:-23336967 | None:intergenic |
GGTGGTTGAGACTTGTAGGT+GGG | 0.409935 | 4_3:-23324995 | None:intergenic |
AGCCTGACATCCCTCAATAT+CGG | 0.411203 | 4_3:-23336125 | None:intergenic |
TACCAACTGCATTGACTGCT+TGG | 0.413476 | 4_3:+23333322 | Msa0635140:CDS |
GTGATATCTCATGTCAAAAT+CGG | 0.413861 | 4_3:+23325156 | Msa0635140:exon |
TTGTAGGCCATAAGCATATT+GGG | 0.414917 | 4_3:-23333360 | None:intergenic |
TAGTGAAGGGCTAAATTCTA+TGG | 0.415541 | 4_3:+23333208 | Msa0635140:CDS |
TCATCTCTGCAAGCTGGTAC+AGG | 0.417780 | 4_3:-23334783 | None:intergenic |
CTTGTAGGCCATAAGCATAT+TGG | 0.419524 | 4_3:-23333361 | None:intergenic |
ATCGAGTTCTGGTGGATGAT+TGG | 0.420569 | 4_3:-23325245 | None:intergenic |
GATGCTCTTGCGCAGCAGTA+TGG | 0.421487 | 4_3:+23333488 | Msa0635140:CDS |
TACAAATTATGTCAGGCTTA+GGG | 0.424911 | 4_3:-23330398 | None:intergenic |
TTTGAAATTATTAATGAAGC+TGG | 0.425355 | 4_3:+23337022 | Msa0635140:CDS |
GTCAAAATCGGAGAATTCAA+TGG | 0.427470 | 4_3:+23325168 | Msa0635140:CDS |
GCGTCGGTGTTGTGGTGGTT+GGG | 0.427488 | 4_3:-23325087 | None:intergenic |
GGTGTTGTGGTGGTTGGGAG+GGG | 0.429553 | 4_3:-23325082 | None:intergenic |
CATGTGGAATTGTAATCAAT+TGG | 0.433559 | 4_3:-23327365 | None:intergenic |
GCCAAAAGCTCATCATATCC+TGG | 0.437998 | 4_3:-23337185 | None:intergenic |
TATTGTTCTTAATTTGATCA+AGG | 0.447253 | 4_3:+23330598 | Msa0635140:CDS |
AACCAAAGCTATAGTCCATA+TGG | 0.447803 | 4_3:-23327707 | None:intergenic |
GTTATATACAAAGAGGCATT+GGG | 0.449142 | 4_3:-23337487 | None:intergenic |
AGAGATGGAAGCAGCTCTAA+AGG | 0.450200 | 4_3:+23337054 | Msa0635140:CDS |
ACAGGTGTTTCCAGAGAGGC+AGG | 0.450900 | 4_3:+23333646 | Msa0635140:intron |
AACTTGAATTGGCTTTCCTC+TGG | 0.451572 | 4_3:+23336160 | Msa0635140:CDS |
ATATTCTTACAAATTATGTC+AGG | 0.453480 | 4_3:-23330405 | None:intergenic |
GAGATCTGACAGCTAGTTCT+GGG | 0.455038 | 4_3:+23333162 | Msa0635140:CDS |
CTAGATGCAATAACACCATA+TGG | 0.464838 | 4_3:+23327692 | Msa0635140:CDS |
GGACGCCAGCTTCATGCAAT+GGG | 0.468488 | 4_3:+23333389 | Msa0635140:CDS |
TCTGGGGATCTTGCAAGGCT+TGG | 0.471116 | 4_3:+23333179 | Msa0635140:CDS |
GAGACTTGTAGGTGGGGTGG+AGG | 0.471265 | 4_3:-23324988 | None:intergenic |
TGCCTCTTTGTATATAACTA+AGG | 0.471552 | 4_3:+23337492 | Msa0635140:three_prime_UTR |
AGTTATATACAAAGAGGCAT+TGG | 0.472250 | 4_3:-23337488 | None:intergenic |
GGCCAGAGAAAGTATGAAGA+AGG | 0.472599 | 4_3:+23336070 | Msa0635140:CDS |
TCCTGCTGCGAATACAAAAC+AGG | 0.472860 | 4_3:-23325496 | None:intergenic |
TGGCATCCCTTCTTCTTGAT+CGG | 0.473077 | 4_3:-23327620 | None:intergenic |
ATAAGACATTACGCTGCATC+AGG | 0.476287 | 4_3:-23334936 | None:intergenic |
GCTGGCGTCCTAAAGCTTGT+AGG | 0.481066 | 4_3:-23333376 | None:intergenic |
CATCTCCAATGCCAGATACA+TGG | 0.481497 | 4_3:-23334186 | None:intergenic |
TATCTCCATGTATCTGGCAT+TGG | 0.482294 | 4_3:+23334181 | Msa0635140:CDS |
AATGTCGCCCAATATGCTTA+TGG | 0.485726 | 4_3:+23333353 | Msa0635140:CDS |
TGCGAACCTGATCAGAAGCC+AGG | 0.488033 | 4_3:+23334885 | Msa0635140:CDS |
CTGTTGAATTTCAAATTCGA+TGG | 0.488718 | 4_3:-23325134 | None:intergenic |
TGGTACGGAGGCACCCTCCT+TGG | 0.489699 | 4_3:+23336439 | Msa0635140:CDS |
AGCAGCCAGCTTCTTCATCA+AGG | 0.489817 | 4_3:-23330296 | None:intergenic |
GGAAGGAAAACCTGCTCTAT+GGG | 0.493809 | 4_3:+23334141 | Msa0635140:CDS |
CCCAGTGAATAAATCTAAGA+TGG | 0.495640 | 4_3:-23331805 | None:intergenic |
AACCGATATTGAGGGATGTC+AGG | 0.498474 | 4_3:+23336123 | Msa0635140:CDS |
AGGAGGACTCACAACTTCTC+AGG | 0.498561 | 4_3:-23334217 | None:intergenic |
ACCGGTAGCTCGATTACCTT+CGG | 0.499021 | 4_3:-23325545 | None:intergenic |
AGCGAAGAATTTACAAGATG+AGG | 0.500083 | 4_3:-23337113 | None:intergenic |
TTCTAGTGAAACCGATATTG+AGG | 0.500315 | 4_3:+23336114 | Msa0635140:CDS |
GAAAATGATACTAACCGCTC+TGG | 0.500337 | 4_3:-23325308 | None:intergenic |
AACCACCTCGTCAACCAACT+TGG | 0.501393 | 4_3:-23337142 | None:intergenic |
TCTAGAGCGTCGAGAAATCA+AGG | 0.502908 | 4_3:-23329901 | None:intergenic |
TTCCAGAGAGGCAGGGAAAG+TGG | 0.504412 | 4_3:+23333654 | Msa0635140:CDS |
GTCTCATCCGATCAAGAAGA+AGG | 0.504934 | 4_3:+23327613 | Msa0635140:CDS |
AAATGTAGACAGTTGAGAAA+AGG | 0.505433 | 4_3:+23331708 | Msa0635140:intron |
TTTACTTAATTGGAAGTGAT+CGG | 0.505585 | 4_3:+23325404 | Msa0635140:CDS |
AGGAAGAGAAGGTTGTGGAA+TGG | 0.506785 | 4_3:-23325051 | None:intergenic |
GAAGAAGCTGGCTGCTGCAA+GGG | 0.507584 | 4_3:+23330303 | Msa0635140:CDS |
ACCAAGTTGGTGCTGACCTT+GGG | 0.509470 | 4_3:+23337083 | Msa0635140:CDS |
GTGAATTTGCAAATGCTGTT+GGG | 0.509685 | 4_3:+23331753 | Msa0635140:CDS |
TCAAAATCGGAGAATTCAAT+GGG | 0.511303 | 4_3:+23325169 | Msa0635140:CDS |
AGGACGCCAGCTTCATGCAA+TGG | 0.512786 | 4_3:+23333388 | Msa0635140:CDS |
AATCTAAGATGGCTCTCTGC+TGG | 0.513164 | 4_3:-23331794 | None:intergenic |
TCCCAAGGTCAGCACCAACT+TGG | 0.514716 | 4_3:-23337084 | None:intergenic |
AGTAGCAAACTTAAAACAGA+AGG | 0.515213 | 4_3:-23337417 | None:intergenic |
CGTGAATTTGCAAATGCTGT+TGG | 0.518951 | 4_3:+23331752 | Msa0635140:CDS |
CATACGATAATATATTTGTC+TGG | 0.519122 | 4_3:+23327641 | Msa0635140:CDS |
GACCAAGTTGGTGCTGACCT+TGG | 0.519445 | 4_3:+23337082 | Msa0635140:CDS |
TGGTGGTTGAGACTTGTAGG+TGG | 0.519759 | 4_3:-23324996 | None:intergenic |
CATCTCTGCAAGCTGGTACA+GGG | 0.520292 | 4_3:-23334782 | None:intergenic |
GTTGAGACTTGTAGGTGGGG+TGG | 0.520583 | 4_3:-23324991 | None:intergenic |
TCGGTGTTGTGGTGGTTGGG+AGG | 0.521542 | 4_3:-23325084 | None:intergenic |
ATCTCTGCAAGCTGGTACAG+GGG | 0.523665 | 4_3:-23334781 | None:intergenic |
ACAAACCCATTGCATGAAGC+TGG | 0.527122 | 4_3:-23333394 | None:intergenic |
ACATTATGCTGAGTTATGTC+AGG | 0.527355 | 4_3:+23336492 | Msa0635140:CDS |
GGGGAGTGAATGATCGAGGG+AGG | 0.530152 | 4_3:+23330241 | Msa0635140:CDS |
CTAGTTCTGGGGATCTTGCA+AGG | 0.531421 | 4_3:+23333174 | Msa0635140:CDS |
CATATTGGGCGACATTTGTA+CGG | 0.533424 | 4_3:-23333346 | None:intergenic |
ATAACTAAAGAAGAAATCCT+TGG | 0.533615 | 4_3:-23327557 | None:intergenic |
AAATTAAGAGTTTGCTTCAG+CGG | 0.533721 | 4_3:+23325518 | Msa0635140:CDS |
CCATCTTAGATTTATTCACT+GGG | 0.535225 | 4_3:+23331805 | Msa0635140:CDS |
CTCGCTTATCGATCTTTGGG+AGG | 0.535512 | 4_3:+23329865 | Msa0635140:CDS |
CTGTTTCCAGAAACTCCACC+TGG | 0.540122 | 4_3:-23334903 | None:intergenic |
AGCTGGTGTTGCAGCAGAGA+TGG | 0.541086 | 4_3:+23337039 | Msa0635140:CDS |
CATTAACTATGACTTTACAT+AGG | 0.542309 | 4_3:-23337256 | None:intergenic |
GGTGCCTCCGTACCAACCAT+TGG | 0.542805 | 4_3:-23336431 | None:intergenic |
GCCGAAGGTAATCGAGCTAC+CGG | 0.545445 | 4_3:+23325544 | Msa0635140:CDS |
TCTTCGCTGATGATCCAAGT+TGG | 0.546523 | 4_3:+23337128 | Msa0635140:CDS |
TGGCTTCTGATCAGGTTCGC+AGG | 0.546559 | 4_3:-23334883 | None:intergenic |
GCGAAGAATTTACAAGATGA+GGG | 0.547756 | 4_3:-23337112 | None:intergenic |
GTTGACGAGGTGGTTAATTG+GGG | 0.547762 | 4_3:+23337150 | Msa0635140:CDS |
GCTGCTGCAATACTACTGTC+AGG | 0.549985 | 4_3:-23333437 | None:intergenic |
AACGAGTCCAATGGTTGGTA+CGG | 0.552073 | 4_3:+23336424 | Msa0635140:CDS |
TACAGTAATGCTTACACGGA+TGG | 0.552145 | 4_3:+23333725 | Msa0635140:CDS |
CGCCTCAGCATCATTTCTCG+AGG | 0.552150 | 4_3:-23331731 | None:intergenic |
CGCCTTAGTTATATACAAAG+AGG | 0.552454 | 4_3:-23337494 | None:intergenic |
TGAAGAAGCTGGCTGCTGCA+AGG | 0.554250 | 4_3:+23330302 | Msa0635140:CDS |
AGACAAATTGGTTCTATATG+TGG | 0.557304 | 4_3:+23327315 | Msa0635140:CDS |
AGCAGTCAATGCAGTTGGTA+CGG | 0.557547 | 4_3:-23333319 | None:intergenic |
GAGAAATCATCTCTGCAAGC+TGG | 0.557758 | 4_3:-23334789 | None:intergenic |
TCTAGTGAAACCGATATTGA+GGG | 0.558413 | 4_3:+23336115 | Msa0635140:CDS |
ATGGATATGTATCAAAGTAT+GGG | 0.559219 | 4_3:+23333464 | Msa0635140:CDS |
AGGCTTGGAATCAGTAGTGA+AGG | 0.560779 | 4_3:+23333194 | Msa0635140:CDS |
AAGAGTAATCGAACAAGCAC+AGG | 0.564418 | 4_3:+23332067 | Msa0635140:CDS |
GAATCAAGCTCCCATAGAGC+AGG | 0.565993 | 4_3:-23334151 | None:intergenic |
ATCATCTTGGAAAAGTTCAA+AGG | 0.567326 | 4_3:-23336954 | None:intergenic |
ATTGTCCTTGATGAAGAAGC+TGG | 0.567639 | 4_3:+23330291 | Msa0635140:CDS |
CCAAAAGCTCATCATATCCT+GGG | 0.567744 | 4_3:-23337184 | None:intergenic |
TCCTAGAACTGCCAAAACAT+TGG | 0.568290 | 4_3:-23331969 | None:intergenic |
TTCATCTTGATCACCAAGGA+GGG | 0.571995 | 4_3:-23336452 | None:intergenic |
CTTAACTCTTCTGGGAGAGA+CGG | 0.573237 | 4_3:+23334747 | Msa0635140:CDS |
TTGCTTCAGCGGATTGCCGA+AGG | 0.574848 | 4_3:+23325529 | Msa0635140:CDS |
TCTTGGAAAAGTTCAAAGGC+AGG | 0.575729 | 4_3:-23336950 | None:intergenic |
GGTTGTGCCACCATGGTTGG+TGG | 0.575949 | 4_3:-23325013 | None:intergenic |
GCAAGCCCAACATCGTAAAG+AGG | 0.576027 | 4_3:+23332038 | Msa0635140:CDS |
CAGACAAATATATTATCGTA+TGG | 0.579113 | 4_3:-23327640 | None:intergenic |
CTCACTCTAAAACTGAGCTA+AGG | 0.579574 | 4_3:+23327409 | Msa0635140:CDS |
GGGAGTGAATGATCGAGGGA+GGG | 0.583263 | 4_3:+23330242 | Msa0635140:CDS |
CCATGCAATTTATAGCATCA+AGG | 0.585778 | 4_3:+23327338 | Msa0635140:CDS |
AGTTCTGGTGGATGATTGGA+AGG | 0.588691 | 4_3:-23325241 | None:intergenic |
GTGGTTGAGACTTGTAGGTG+GGG | 0.588829 | 4_3:-23324994 | None:intergenic |
CCTTGATGCTATAAATTGCA+TGG | 0.589019 | 4_3:-23327338 | None:intergenic |
TTTGTCTGATGTGCCAAAAG+TGG | 0.589966 | 4_3:+23333412 | Msa0635140:CDS |
CTTAGGTTACTTCAAACCAC+AGG | 0.594800 | 4_3:+23334120 | Msa0635140:CDS |
ATCCAAGTTGGTTGACGAGG+TGG | 0.594865 | 4_3:+23337140 | Msa0635140:CDS |
TCGCTTATCGATCTTTGGGA+GGG | 0.596038 | 4_3:+23329866 | Msa0635140:CDS |
AACGGTTGTGCCACCATGGT+TGG | 0.597411 | 4_3:-23325016 | None:intergenic |
ATCCTTGGTCAAATCAACAC+TGG | 0.602824 | 4_3:-23327542 | None:intergenic |
TTCATTCATATCATTACCAG+AGG | 0.602926 | 4_3:-23336176 | None:intergenic |
GTCCAGTGTTGATTTGACCA+AGG | 0.603087 | 4_3:+23327540 | Msa0635140:CDS |
GCTCTTGCGCAGCAGTATGG+TGG | 0.604446 | 4_3:+23333491 | Msa0635140:CDS |
CTAAAGGAGTATGACCAAGT+TGG | 0.607906 | 4_3:+23337070 | Msa0635140:CDS |
GTCCAAGCAGTCAATGCAGT+TGG | 0.608073 | 4_3:-23333324 | None:intergenic |
GTAGCAAACTTAAAACAGAA+GGG | 0.608888 | 4_3:-23337416 | None:intergenic |
CAAGCCCAACATCGTAAAGA+GGG | 0.612195 | 4_3:+23332039 | Msa0635140:CDS |
TGCTTTCATCTTGATCACCA+AGG | 0.612359 | 4_3:-23336456 | None:intergenic |
ACCATTGGACTCGTTTGCTG+AGG | 0.612462 | 4_3:-23336416 | None:intergenic |
TCTCATCCGATCAAGAAGAA+GGG | 0.617230 | 4_3:+23327614 | Msa0635140:CDS |
AAAAGGGGAGTGAATGATCG+AGG | 0.618530 | 4_3:+23330237 | Msa0635140:CDS |
GAGATATGATCCAACATACC+AGG | 0.619966 | 4_3:+23330526 | Msa0635140:CDS |
TCAGATTGAATTGACACATG+TGG | 0.625059 | 4_3:-23327381 | None:intergenic |
GAAGAAGGATCGAGTTCTGG+TGG | 0.630344 | 4_3:-23325253 | None:intergenic |
AGAGAACGGTTGTGCCACCA+TGG | 0.631077 | 4_3:-23325020 | None:intergenic |
AGTTCAGTTGTGCAAATGCG+TGG | 0.631618 | 4_3:+23330333 | Msa0635140:CDS |
GGTTACTTCAAACCACAGGA+AGG | 0.633706 | 4_3:+23334124 | Msa0635140:CDS |
ACCTCAGCAAACGAGTCCAA+TGG | 0.635950 | 4_3:+23336415 | Msa0635140:CDS |
AAAGGGGAGTGAATGATCGA+GGG | 0.636308 | 4_3:+23330238 | Msa0635140:CDS |
GGCTTGGAATCAGTAGTGAA+GGG | 0.636726 | 4_3:+23333195 | Msa0635140:CDS |
GGCCTCGAGAAATGATGCTG+AGG | 0.637737 | 4_3:+23331729 | Msa0635140:CDS |
AGAACTCCACTCTGAAAATG+TGG | 0.638512 | 4_3:-23333296 | None:intergenic |
GCTTCTTGTGACCAGAAAAG+CGG | 0.641494 | 4_3:-23330363 | None:intergenic |
CAAGTCTCAACCACCAACCA+TGG | 0.644479 | 4_3:+23325003 | Msa0635140:five_prime_UTR |
GAGTCCAATGGTTGGTACGG+AGG | 0.650013 | 4_3:+23336427 | Msa0635140:CDS |
GAATGGATGAGAAGAGAGAA+CGG | 0.650858 | 4_3:-23325034 | None:intergenic |
ATATTACAGTAATGCTTACA+CGG | 0.651884 | 4_3:+23333721 | Msa0635140:CDS |
GAAGGTAATCGAGCTACCGG+TGG | 0.653255 | 4_3:+23325547 | Msa0635140:CDS |
GTAATCGAACAAGCACAGGA+AGG | 0.654066 | 4_3:+23332071 | Msa0635140:CDS |
TTTCATCTTGATCACCAAGG+AGG | 0.656507 | 4_3:-23336453 | None:intergenic |
AAGATGAGGGAATGATCCCA+AGG | 0.660336 | 4_3:-23337099 | None:intergenic |
AGCGACGAAAGTAAGTCCAC+CGG | 0.665131 | 4_3:-23325563 | None:intergenic |
GGTGGAGTTTCTGGAAACAG+TGG | 0.666138 | 4_3:+23334906 | Msa0635140:CDS |
CAGGTGTTTCCAGAGAGGCA+GGG | 0.668351 | 4_3:+23333647 | Msa0635140:intron |
TGGTAATGATATGAATGAAG+AGG | 0.677063 | 4_3:+23336180 | Msa0635140:CDS |
ATGATCCAAGTTGGTTGACG+AGG | 0.679713 | 4_3:+23337137 | Msa0635140:CDS |
CAGCAAACGAGTCCAATGGT+TGG | 0.685043 | 4_3:+23336419 | Msa0635140:CDS |
ATTTACAGGTGTTTCCAGAG+AGG | 0.688253 | 4_3:+23333642 | Msa0635140:intron |
GATTGCCATATCTCTCAGCA+AGG | 0.690951 | 4_3:-23330571 | None:intergenic |
GTCTCAACCACCAACCATGG+TGG | 0.707947 | 4_3:+23325006 | Msa0635140:five_prime_UTR |
AGATCTGACAGCTAGTTCTG+GGG | 0.715065 | 4_3:+23333163 | Msa0635140:CDS |
TGAAAGAGAGCAACACTACG+CGG | 0.721313 | 4_3:+23336979 | Msa0635140:CDS |
GAACCTGATCAGAAGCCAGG+TGG | 0.737779 | 4_3:+23334888 | Msa0635140:CDS |
GTTCTGGTGGATGATTGGAA+GGG | 0.742801 | 4_3:-23325240 | None:intergenic |
CAAACTCTACGAAACCAGAG+CGG | 0.807437 | 4_3:+23325294 | Msa0635140:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAAATTTATTTATATATA+TGG | - | chr4_3:23327194-23327213 | None:intergenic | 0.0% |
!!! | TTTTATATTTAAATTTGGAA+AGG | + | chr4_3:23326750-23326769 | Msa0635140:intron | 10.0% |
!!! | CTTTATTTTTAGTTTTTATT+TGG | + | chr4_3:23327078-23327097 | Msa0635140:intron | 10.0% |
!! | AATATATATAGAGATAAAAT+AGG | + | chr4_3:23329103-23329122 | Msa0635140:intron | 10.0% |
!! | ATATATATAGAGATAAAATA+GGG | + | chr4_3:23329104-23329123 | Msa0635140:intron | 10.0% |
!!! | CTTCATTATTATTTTTTATT+AGG | - | chr4_3:23330629-23330648 | None:intergenic | 10.0% |
!!! | ATAATTTCTTTAAGAAAAAA+TGG | + | chr4_3:23331089-23331108 | Msa0635140:intron | 10.0% |
!!! | TAATATGAAAACTAATTTTT+GGG | + | chr4_3:23331425-23331444 | Msa0635140:intron | 10.0% |
!!! | TATTTTACATGATTTTAAAT+TGG | + | chr4_3:23333541-23333560 | Msa0635140:intron | 10.0% |
!!! | ACAATTATTTTACAAATACA+TGG | - | chr4_3:23325745-23325764 | None:intergenic | 15.0% |
!!! | GTTTTACATATATTTTTTCT+AGG | - | chr4_3:23326606-23326625 | None:intergenic | 15.0% |
!! | ATAGGATATAATTAGAAATA+AGG | + | chr4_3:23326653-23326672 | Msa0635140:intron | 15.0% |
!!! | TATATAAATTCTCGTTTTTT+GGG | - | chr4_3:23328910-23328929 | None:intergenic | 15.0% |
!! | ACAATAAAATCAAGTAATTA+CGG | - | chr4_3:23329618-23329637 | None:intergenic | 15.0% |
!!! | ATAATTTGTAAGAATATAGT+TGG | + | chr4_3:23330411-23330430 | Msa0635140:intron | 15.0% |
!!! | TAATTTGTAAGAATATAGTT+GGG | + | chr4_3:23330412-23330431 | Msa0635140:intron | 15.0% |
!! | ATCAAATTAAGAACAATAAT+TGG | - | chr4_3:23330596-23330615 | None:intergenic | 15.0% |
!!! | TTTTATTTAAACATTAGTTG+TGG | - | chr4_3:23330803-23330822 | None:intergenic | 15.0% |
!!! | ATTTTTTTAAATTGGTTTCT+TGG | + | chr4_3:23330960-23330979 | Msa0635140:intron | 15.0% |
!!! | GTAATATGAAAACTAATTTT+TGG | + | chr4_3:23331424-23331443 | Msa0635140:intron | 15.0% |
!! | AAGAAATAAATATGCAAAAA+GGG | - | chr4_3:23331642-23331661 | None:intergenic | 15.0% |
!!! | TATTCTCTTTATAATTTTTG+TGG | + | chr4_3:23331670-23331689 | Msa0635140:intron | 15.0% |
!!! | TAAATCTAATTTTTGCTAAT+CGG | + | chr4_3:23332273-23332292 | Msa0635140:intron | 15.0% |
!! | AATAAAAATAATCATGATGA+TGG | - | chr4_3:23332903-23332922 | None:intergenic | 15.0% |
!! | TATCTCATCTTTAATAATAT+TGG | + | chr4_3:23333816-23333835 | Msa0635140:intron | 15.0% |
!! | ATCTCATCTTTAATAATATT+GGG | + | chr4_3:23333817-23333836 | Msa0635140:intron | 15.0% |
!!! | TTTAAGTTTCTAATATTTAG+AGG | + | chr4_3:23333843-23333862 | Msa0635140:intron | 15.0% |
!! | TTAAGTTTCTAATATTTAGA+GGG | + | chr4_3:23333844-23333863 | Msa0635140:intron | 15.0% |
!! | CAAATCATTAAATAATAAAG+TGG | - | chr4_3:23334269-23334288 | None:intergenic | 15.0% |
!! | AAATAAAAAATAATGAGCAA+AGG | - | chr4_3:23335338-23335357 | None:intergenic | 15.0% |
!!! | GATTTTAACAAACAAATTAA+TGG | - | chr4_3:23335776-23335795 | None:intergenic | 15.0% |
!! | CTTATATGTATAAAAATGAA+GGG | - | chr4_3:23335840-23335859 | None:intergenic | 15.0% |
!! | ACTTATATGTATAAAAATGA+AGG | - | chr4_3:23335841-23335860 | None:intergenic | 15.0% |
!! | ACAAATAAATAATGACATAA+AGG | + | chr4_3:23336812-23336831 | Msa0635140:intron | 15.0% |
!! | TTAGCATATATATATTAGTT+AGG | + | chr4_3:23337385-23337404 | Msa0635140:three_prime_UTR | 15.0% |
!! | AAAATTAATCGATGAATGTT+CGG | - | chr4_3:23325350-23325369 | None:intergenic | 20.0% |
!! | TGTTATACTAGTAGAAAAAT+GGG | + | chr4_3:23326107-23326126 | Msa0635140:intron | 20.0% |
!!! | CAAATTTGTTTTTAACAACA+CGG | - | chr4_3:23326778-23326797 | None:intergenic | 20.0% |
!! | TCATCAAACTCATAATATAA+AGG | - | chr4_3:23326847-23326866 | None:intergenic | 20.0% |
!! | GAAACTTAAACTAAAGATTA+GGG | - | chr4_3:23326902-23326921 | None:intergenic | 20.0% |
!! | TGAAACTTAAACTAAAGATT+AGG | - | chr4_3:23326903-23326922 | None:intergenic | 20.0% |
!! | CATAACAAAAGTTAAAGATA+AGG | - | chr4_3:23327044-23327063 | None:intergenic | 20.0% |
!!! | CTTTAACTTTTGTTATGAAA+TGG | + | chr4_3:23327047-23327066 | Msa0635140:intron | 20.0% |
!! | ACAGTTACAAATGTTATTAA+CGG | + | chr4_3:23327127-23327146 | Msa0635140:intron | 20.0% |
!! | TTGATCTTTATAAATTGAAC+TGG | + | chr4_3:23327469-23327488 | Msa0635140:intron | 20.0% |
!! | TGATCTTTATAAATTGAACT+GGG | + | chr4_3:23327470-23327489 | Msa0635140:intron | 20.0% |
!! | TGTTCAAAATTTAGTACTAT+TGG | + | chr4_3:23327903-23327922 | Msa0635140:intron | 20.0% |
!! | GTTCAAAATTTAGTACTATT+GGG | + | chr4_3:23327904-23327923 | Msa0635140:intron | 20.0% |
!! | AATTTGTACAAAAAATCAAG+AGG | + | chr4_3:23328148-23328167 | Msa0635140:intron | 20.0% |
!! | TCATAGAAAAAAACTTGAAT+TGG | + | chr4_3:23328224-23328243 | Msa0635140:intron | 20.0% |
!!! | ATACAAACATGTTTCTATAT+GGG | + | chr4_3:23328296-23328315 | Msa0635140:intron | 20.0% |
!! | TTCTTCAGTTAATAATAAGA+TGG | + | chr4_3:23328592-23328611 | Msa0635140:intron | 20.0% |
!!! | CTATATAAATTCTCGTTTTT+TGG | - | chr4_3:23328911-23328930 | None:intergenic | 20.0% |
!! | AACACTATAAATATACATCA+TGG | - | chr4_3:23328939-23328958 | None:intergenic | 20.0% |
!! | ATGTATATTTATAGTGTTAG+TGG | + | chr4_3:23328941-23328960 | Msa0635140:intron | 20.0% |
!! | GTTTCAGTTCAAAAAAAAAA+AGG | - | chr4_3:23329081-23329100 | None:intergenic | 20.0% |
!! | AATTGATTATACAATGACAA+AGG | - | chr4_3:23329824-23329843 | None:intergenic | 20.0% |
!!! | TTTAAGATCTATAAAATTGC+AGG | + | chr4_3:23329842-23329861 | Msa0635140:intron | 20.0% |
!! | TATGTTGTAGTAGTTAAATA+TGG | + | chr4_3:23330105-23330124 | Msa0635140:intron | 20.0% |
!! | TTAATCCAACAACTTAATTA+TGG | - | chr4_3:23330182-23330201 | None:intergenic | 20.0% |
!!! | ATTTTTGTAGTTACTTGAAA+AGG | + | chr4_3:23330220-23330239 | Msa0635140:intron | 20.0% |
!!! | TTTTTGTAGTTACTTGAAAA+GGG | + | chr4_3:23330221-23330240 | Msa0635140:intron | 20.0% |
!! | ATATTCTTACAAATTATGTC+AGG | - | chr4_3:23330408-23330427 | None:intergenic | 20.0% |
!!! | TATTGTTCTTAATTTGATCA+AGG | + | chr4_3:23330598-23330617 | Msa0635140:CDS | 20.0% |
!!! | AATACCATAAAATCTTCTTT+TGG | + | chr4_3:23330891-23330910 | Msa0635140:intron | 20.0% |
!!! | TGGTCAGAATTTTTTTAAAT+TGG | + | chr4_3:23330952-23330971 | Msa0635140:intron | 20.0% |
!! | TTCTTAAAGAAATTATTGAG+AGG | - | chr4_3:23331085-23331104 | None:intergenic | 20.0% |
!! | AACAAATCATAGTAATAACT+CGG | + | chr4_3:23331402-23331421 | Msa0635140:intron | 20.0% |
!!! | AATTTTTGGGATATAACTTT+TGG | + | chr4_3:23331438-23331457 | Msa0635140:intron | 20.0% |
!!! | ATTTTTGGGATATAACTTTT+GGG | + | chr4_3:23331439-23331458 | Msa0635140:intron | 20.0% |
!! | GAAGAAATAAATATGCAAAA+AGG | - | chr4_3:23331643-23331662 | None:intergenic | 20.0% |
!!! | TTAACAAGTTTTTACTATAG+TGG | + | chr4_3:23332016-23332035 | Msa0635140:CDS | 20.0% |
!! | TTAGTTAACAATTCAAACAT+TGG | - | chr4_3:23332103-23332122 | None:intergenic | 20.0% |
!!! | GCAAAAATATCAATTTTTTC+CGG | + | chr4_3:23332183-23332202 | Msa0635140:intron | 20.0% |
!!! | ACTATCATATTTTTCATAGA+AGG | + | chr4_3:23332430-23332449 | Msa0635140:intron | 20.0% |
!!! | ATTACTGTAATATCGTTTTA+TGG | - | chr4_3:23333714-23333733 | None:intergenic | 20.0% |
!! | ATGAGATATAAATTCCAATT+AGG | - | chr4_3:23333804-23333823 | None:intergenic | 20.0% |
!! | CATAAATAAAGAAAGTAACA+AGG | - | chr4_3:23334240-23334259 | None:intergenic | 20.0% |
!! | AAGGAAACTAAATCATAAAA+AGG | - | chr4_3:23334312-23334331 | None:intergenic | 20.0% |
!!! | AGGTCGTTTTTTTTTTTTTT+TGG | - | chr4_3:23334574-23334593 | None:intergenic | 20.0% |
!! | ATAAATAACTTCTAACAGAA+GGG | - | chr4_3:23334597-23334616 | None:intergenic | 20.0% |
!!! | TTAACAAATTATAGAAGCAT+CGG | - | chr4_3:23334634-23334653 | None:intergenic | 20.0% |
!! | AAACAGCATATATAAAAGAT+GGG | - | chr4_3:23334673-23334692 | None:intergenic | 20.0% |
!! | TAAACAGCATATATAAAAGA+TGG | - | chr4_3:23334674-23334693 | None:intergenic | 20.0% |
!! | TTGAAAAAGATATTGAAGAT+CGG | - | chr4_3:23334706-23334725 | None:intergenic | 20.0% |
!!! | TACATTTTTAATTGTACTAC+AGG | - | chr4_3:23334856-23334875 | None:intergenic | 20.0% |
!! | GTAGTACAATTAAAAATGTA+AGG | + | chr4_3:23334856-23334875 | Msa0635140:CDS | 20.0% |
!! | ATTGAATTAAAAAGAACCTA+AGG | + | chr4_3:23335074-23335093 | Msa0635140:intron | 20.0% |
!! | AATTTGAATATTTAAAGGGA+TGG | - | chr4_3:23335227-23335246 | None:intergenic | 20.0% |
!!! | TATCAATTTTGCTTAAAAAG+AGG | - | chr4_3:23335529-23335548 | None:intergenic | 20.0% |
!!! | AATGAACTCTATGAATATTT+TGG | - | chr4_3:23335701-23335720 | None:intergenic | 20.0% |
!! | TATTTAAAAACAAGAGAGAT+TGG | - | chr4_3:23335813-23335832 | None:intergenic | 20.0% |
!! | TCTTTATGATTAGAACATTA+TGG | - | chr4_3:23336745-23336764 | None:intergenic | 20.0% |
!! | ATTTCCTTATATTAAAGAGT+TGG | - | chr4_3:23336786-23336805 | None:intergenic | 20.0% |
!!! | TTTGAAATTATTAATGAAGC+TGG | + | chr4_3:23337022-23337041 | Msa0635140:CDS | 20.0% |
!!! | AATGTCACTTTTTTGTTTTT+AGG | + | chr4_3:23337347-23337366 | Msa0635140:three_prime_UTR | 20.0% |
!!! | TTTTTTTTGTGATTGTGTAG+AGG | + | chr4_3:23325380-23325399 | Msa0635140:intron | 25.0% |
! | TTTACTTAATTGGAAGTGAT+CGG | + | chr4_3:23325404-23325423 | Msa0635140:CDS | 25.0% |
! | TAATATACTCGCAGAAAAAT+AGG | + | chr4_3:23325908-23325927 | Msa0635140:intron | 25.0% |
! | TATTGCTAGTTGTGTAAATT+TGG | + | chr4_3:23326031-23326050 | Msa0635140:intron | 25.0% |
! | GTGTTATACTAGTAGAAAAA+TGG | + | chr4_3:23326106-23326125 | Msa0635140:intron | 25.0% |
!! | TCAGAAGAGGAAAATTTTAT+CGG | + | chr4_3:23326281-23326300 | Msa0635140:intron | 25.0% |
! | AGATCTAGAGATTAATTAGT+TGG | + | chr4_3:23326628-23326647 | Msa0635140:intron | 25.0% |
! | GAGATTAATTAGTTGGATAT+AGG | + | chr4_3:23326635-23326654 | Msa0635140:intron | 25.0% |
! | AGGTATATGATTGAACATTA+TGG | + | chr4_3:23326673-23326692 | Msa0635140:intron | 25.0% |
! | TAACTCCGACAAAAATTAAT+AGG | + | chr4_3:23326807-23326826 | Msa0635140:intron | 25.0% |
!! | GAGTACCTATTAATTTTTGT+CGG | - | chr4_3:23326815-23326834 | None:intergenic | 25.0% |
! | CAAAAATTAATAGGTACTCT+TGG | + | chr4_3:23326816-23326835 | Msa0635140:intron | 25.0% |
! | CAGTTACAAATGTTATTAAC+GGG | + | chr4_3:23327128-23327147 | Msa0635140:intron | 25.0% |
! | GATCTTTATAAATTGAACTG+GGG | + | chr4_3:23327471-23327490 | Msa0635140:intron | 25.0% |
! | ATAACTAAAGAAGAAATCCT+TGG | - | chr4_3:23327560-23327579 | None:intergenic | 25.0% |
! | TTTGCAAACTTTGCATTATA+GGG | - | chr4_3:23327588-23327607 | None:intergenic | 25.0% |
!! | TTTTGCAAACTTTGCATTAT+AGG | - | chr4_3:23327589-23327608 | None:intergenic | 25.0% |
! | CAGACAAATATATTATCGTA+TGG | - | chr4_3:23327643-23327662 | None:intergenic | 25.0% |
! | CATACGATAATATATTTGTC+TGG | + | chr4_3:23327641-23327660 | Msa0635140:CDS | 25.0% |
! | TATCATTAAACATCCATGAT+TGG | + | chr4_3:23327836-23327855 | Msa0635140:intron | 25.0% |
! | TATTGGGAATTATGATTCTT+CGG | + | chr4_3:23327920-23327939 | Msa0635140:intron | 25.0% |
! | AATTGATCGTGAATCTTTAA+CGG | - | chr4_3:23328096-23328115 | None:intergenic | 25.0% |
! | TGTCCAAAATTTACTACTAT+TGG | + | chr4_3:23328176-23328195 | Msa0635140:intron | 25.0% |
! | GTCCAAAATTTACTACTATT+GGG | + | chr4_3:23328177-23328196 | Msa0635140:intron | 25.0% |
!! | TTCCCAATAGTAGTAAATTT+TGG | - | chr4_3:23328182-23328201 | None:intergenic | 25.0% |
! | ATTTACTACTATTGGGAATT+AGG | + | chr4_3:23328184-23328203 | Msa0635140:intron | 25.0% |
! | TTTCTATGATTCTATATCTC+AGG | - | chr4_3:23328213-23328232 | None:intergenic | 25.0% |
!! | GATACAAACATGTTTCTATA+TGG | + | chr4_3:23328295-23328314 | Msa0635140:intron | 25.0% |
!! | TGTATGAGGGAAAATAATTT+TGG | + | chr4_3:23328682-23328701 | Msa0635140:intron | 25.0% |
!!! | TAATTTTGGAGAGATACAAA+AGG | + | chr4_3:23328696-23328715 | Msa0635140:intron | 25.0% |
! | TTCAAAAACAATAGTAGTGA+TGG | - | chr4_3:23328866-23328885 | None:intergenic | 25.0% |
! | TAATTACGGAGAAAAGAAAA+AGG | - | chr4_3:23329604-23329623 | None:intergenic | 25.0% |
!! | TTTTGTAGTTACTTGAAAAG+GGG | + | chr4_3:23330222-23330241 | Msa0635140:intron | 25.0% |
!! | ATACTATATGCTGCATTTTT+AGG | - | chr4_3:23330857-23330876 | None:intergenic | 25.0% |
!!! | GATTTTATGGTATTGAATGT+TGG | - | chr4_3:23330885-23330904 | None:intergenic | 25.0% |
!! | CTATCCAAAAGAAGATTTTA+TGG | - | chr4_3:23330898-23330917 | None:intergenic | 25.0% |
!! | CATAAAATCTTCTTTTGGAT+AGG | + | chr4_3:23330896-23330915 | Msa0635140:intron | 25.0% |
! | TTAATTCTTGCTGAAGATAT+GGG | - | chr4_3:23331199-23331218 | None:intergenic | 25.0% |
! | ATTAATTCTTGCTGAAGATA+TGG | - | chr4_3:23331200-23331219 | None:intergenic | 25.0% |
! | AAGAAGATTGAGTATGATAA+CGG | + | chr4_3:23331296-23331315 | Msa0635140:intron | 25.0% |
! | ACAAGATCAATTTCTAATCT+TGG | - | chr4_3:23331600-23331619 | None:intergenic | 25.0% |
! | AAATTCATGTTAAGACATCA+TGG | - | chr4_3:23332234-23332253 | None:intergenic | 25.0% |
! | ATGATGTCTTAACATGAATT+TGG | + | chr4_3:23332233-23332252 | Msa0635140:intron | 25.0% |
!! | TTGAGAATGAAAGATTTTGA+AGG | - | chr4_3:23332469-23332488 | None:intergenic | 25.0% |
! | ATAATGTTATGATACATGAG+TGG | - | chr4_3:23332512-23332531 | None:intergenic | 25.0% |
! | AAATCTTACAACTTCAACAT+AGG | - | chr4_3:23332679-23332698 | None:intergenic | 25.0% |
! | AGAACGTTGAATATTATTGA+TGG | + | chr4_3:23332729-23332748 | Msa0635140:intron | 25.0% |
! | TATTATGTTGAGTAATCACT+TGG | - | chr4_3:23332793-23332812 | None:intergenic | 25.0% |
! | AATGGATATGTATCAAAGTA+TGG | + | chr4_3:23333463-23333482 | Msa0635140:CDS | 25.0% |
! | ATGGATATGTATCAAAGTAT+GGG | + | chr4_3:23333464-23333483 | Msa0635140:CDS | 25.0% |
!! | TGTATTTTCTGTGAATTTAC+AGG | + | chr4_3:23333628-23333647 | Msa0635140:intron | 25.0% |
! | ATATTACAGTAATGCTTACA+CGG | + | chr4_3:23333721-23333740 | Msa0635140:CDS | 25.0% |
! | ATTAGGAAACATAAAATAGG+TGG | - | chr4_3:23333787-23333806 | None:intergenic | 25.0% |
! | CCAATTAGGAAACATAAAAT+AGG | - | chr4_3:23333790-23333809 | None:intergenic | 25.0% |
!! | CCTATTTTATGTTTCCTAAT+TGG | + | chr4_3:23333787-23333806 | Msa0635140:intron | 25.0% |
! | ATTCAAGGCAAAATTAACAA+CGG | - | chr4_3:23334062-23334081 | None:intergenic | 25.0% |
!!! | TCAGTATTTTAGACTATTCA+AGG | - | chr4_3:23334077-23334096 | None:intergenic | 25.0% |
! | AAATAAAGAAAGTAACAAGG+AGG | - | chr4_3:23334237-23334256 | None:intergenic | 25.0% |
! | GTATCATTACATACTCATAA+AGG | + | chr4_3:23334425-23334444 | Msa0635140:intron | 25.0% |
! | TACAAACAAAATACAGGATA+AGG | - | chr4_3:23334548-23334567 | None:intergenic | 25.0% |
! | CATAAATAACTTCTAACAGA+AGG | - | chr4_3:23334598-23334617 | None:intergenic | 25.0% |
!!! | TAACAAATTATAGAAGCATC+GGG | - | chr4_3:23334633-23334652 | None:intergenic | 25.0% |
! | GTATTAAGAAGCAATAACAA+AGG | - | chr4_3:23335466-23335485 | None:intergenic | 25.0% |
! | AAAAACTTTGTAAGTTTCTC+TGG | - | chr4_3:23335613-23335632 | None:intergenic | 25.0% |
!!! | ATGATTTTAACTCATGCAAA+TGG | + | chr4_3:23335637-23335656 | Msa0635140:intron | 25.0% |
!!! | TGATTTTAACTCATGCAAAT+GGG | + | chr4_3:23335638-23335657 | Msa0635140:intron | 25.0% |
! | TTGAACAACATCTAATACAA+AGG | + | chr4_3:23335748-23335767 | Msa0635140:intron | 25.0% |
! | CGTAGGAAAAATAACAAAAT+GGG | - | chr4_3:23336269-23336288 | None:intergenic | 25.0% |
! | ACGTAGGAAAAATAACAAAA+TGG | - | chr4_3:23336270-23336289 | None:intergenic | 25.0% |
!! | TAAAGTACCTAAAAAGTCAA+AGG | - | chr4_3:23336390-23336409 | None:intergenic | 25.0% |
! | TGAAGGTTAATAAATATCCT+TGG | + | chr4_3:23336610-23336629 | Msa0635140:intron | 25.0% |
! | TAAAGACATAAACCATATTC+TGG | + | chr4_3:23336759-23336778 | Msa0635140:intron | 25.0% |
! | TAATAGATAACAGAACATGT+AGG | + | chr4_3:23336838-23336857 | Msa0635140:intron | 25.0% |
! | ATACTAGTAAAACTACATCT+TGG | - | chr4_3:23336898-23336917 | None:intergenic | 25.0% |
! | CATTAACTATGACTTTACAT+AGG | - | chr4_3:23337259-23337278 | None:intergenic | 25.0% |
! | AAAAAAGTGACATTCTTGTA+TGG | - | chr4_3:23337341-23337360 | None:intergenic | 25.0% |
! | TTATGTAACACGATAATAAC+TGG | - | chr4_3:23337455-23337474 | None:intergenic | 25.0% |
!! | ATGGTTCTTCGTTTTGAATT+GGG | - | chr4_3:23325118-23325137 | None:intergenic | 30.0% |
CTGTTGAATTTCAAATTCGA+TGG | - | chr4_3:23325137-23325156 | None:intergenic | 30.0% | |
GTGATATCTCATGTCAAAAT+CGG | + | chr4_3:23325156-23325175 | Msa0635140:exon | 30.0% | |
TCAAAATCGGAGAATTCAAT+GGG | + | chr4_3:23325169-23325188 | Msa0635140:CDS | 30.0% | |
!!! | TTTGAATTTTTCAAGAGCGT+AGG | - | chr4_3:23325278-23325297 | None:intergenic | 30.0% |
! | GTGTAGAGGTTTTACTTAAT+TGG | + | chr4_3:23325394-23325413 | Msa0635140:intron | 30.0% |
! | AAATTAAGAGTTTGCTTCAG+CGG | + | chr4_3:23325518-23325537 | Msa0635140:CDS | 30.0% |
! | GACTTTTAGTATAACCAACT+CGG | + | chr4_3:23325807-23325826 | Msa0635140:intron | 30.0% |
TTTCTGCGAGTATATTACAA+CGG | - | chr4_3:23325905-23325924 | None:intergenic | 30.0% | |
! | TTTGATAGTTGTTTGTGATG+TGG | + | chr4_3:23325962-23325981 | Msa0635140:intron | 30.0% |
TTTGCAGTTTATATCATGAG+TGG | + | chr4_3:23326167-23326186 | Msa0635140:intron | 30.0% | |
!! | CTATAAGTTGTTTTCAGAAG+AGG | + | chr4_3:23326268-23326287 | Msa0635140:intron | 30.0% |
AGCACCTATTGTAGTAAATA+TGG | + | chr4_3:23326470-23326489 | Msa0635140:intron | 30.0% | |
ACCTATTGTAGTAAATATGG+TGG | + | chr4_3:23326473-23326492 | Msa0635140:intron | 30.0% | |
TCCACCATATTTACTACAAT+AGG | - | chr4_3:23326477-23326496 | None:intergenic | 30.0% | |
!! | CATTATGGCATTGTTTTATC+TGG | + | chr4_3:23326688-23326707 | Msa0635140:intron | 30.0% |
! | TTTTGTCAATTATGATCCCA+AGG | + | chr4_3:23326955-23326974 | Msa0635140:intron | 30.0% |
ACAAATGTTATTAACGGGAT+TGG | + | chr4_3:23327133-23327152 | Msa0635140:intron | 30.0% | |
CAAATGTTATTAACGGGATT+GGG | + | chr4_3:23327134-23327153 | Msa0635140:intron | 30.0% | |
!! | AGACAAATTGGTTCTATATG+TGG | + | chr4_3:23327315-23327334 | Msa0635140:CDS | 30.0% |
CATGTGGAATTGTAATCAAT+TGG | - | chr4_3:23327368-23327387 | None:intergenic | 30.0% | |
!!! | AAAGTTTTTTGTATCTGCAG+TGG | - | chr4_3:23327519-23327538 | None:intergenic | 30.0% |
AAAAACAAACCTGCCTAAAA+TGG | - | chr4_3:23327738-23327757 | None:intergenic | 30.0% | |
CAAATACTGAAAACCAATCA+TGG | - | chr4_3:23327852-23327871 | None:intergenic | 30.0% | |
GATAGAATAGACAGTTGATT+TGG | + | chr4_3:23327942-23327961 | Msa0635140:intron | 30.0% | |
CAAATTTGCCTAAAATGAAC+AGG | - | chr4_3:23327983-23328002 | None:intergenic | 30.0% | |
! | TGGTAATAATTGTTGCTTGA+AGG | - | chr4_3:23328358-23328377 | None:intergenic | 30.0% |
AACAATTATTACCAAGTGCT+AGG | + | chr4_3:23328364-23328383 | Msa0635140:intron | 30.0% | |
ACAATTATTACCAAGTGCTA+GGG | + | chr4_3:23328365-23328384 | Msa0635140:intron | 30.0% | |
CTGAAAACAGAATATGATGT+CGG | + | chr4_3:23328400-23328419 | Msa0635140:intron | 30.0% | |
ATTTACTAGAATACCACTAG+GGG | - | chr4_3:23328628-23328647 | None:intergenic | 30.0% | |
GATTTACTAGAATACCACTA+GGG | - | chr4_3:23328629-23328648 | None:intergenic | 30.0% | |
ACTCTCTATAATCTGTATGA+GGG | + | chr4_3:23328669-23328688 | Msa0635140:intron | 30.0% | |
AACAACTCTAAACATTGTGT+CGG | - | chr4_3:23328726-23328745 | None:intergenic | 30.0% | |
CAAAAAAAAAAAGGTCAACC+TGG | - | chr4_3:23329072-23329091 | None:intergenic | 30.0% | |
AAAATAGGGATAGTACTGTT+TGG | + | chr4_3:23329118-23329137 | Msa0635140:intron | 30.0% | |
AAATAGGGATAGTACTGTTT+GGG | + | chr4_3:23329119-23329138 | Msa0635140:intron | 30.0% | |
! | TCTCAATCAAAAGTCTTGTA+TGG | - | chr4_3:23329238-23329257 | None:intergenic | 30.0% |
! | ACAATCAAATAGCTCTTTTG+AGG | - | chr4_3:23329273-23329292 | None:intergenic | 30.0% |
!! | AGAGTATCTTATAGCTTGTT+TGG | + | chr4_3:23329349-23329368 | Msa0635140:intron | 30.0% |
!! | TTATAGCTTGTTTGGAATAG+CGG | + | chr4_3:23329357-23329376 | Msa0635140:intron | 30.0% |
! | TTTTCACGTTAAATCTGTCT+CGG | - | chr4_3:23329404-23329423 | None:intergenic | 30.0% |
! | GTTCCATATTTCTGAACTAA+CGG | + | chr4_3:23329515-23329534 | Msa0635140:intron | 30.0% |
TTACCGTTAGTTCAGAAATA+TGG | - | chr4_3:23329521-23329540 | None:intergenic | 30.0% | |
! | ATGTAGTAAGCTTTAGTTAC+TGG | - | chr4_3:23329544-23329563 | None:intergenic | 30.0% |
TACAACATAAACTGATTGAC+AGG | - | chr4_3:23329641-23329660 | None:intergenic | 30.0% | |
ATAGGCTATTCTAACCTAAT+GGG | - | chr4_3:23329726-23329745 | None:intergenic | 30.0% | |
TATAGGCTATTCTAACCTAA+TGG | - | chr4_3:23329727-23329746 | None:intergenic | 30.0% | |
AACCACTGATGTGTTTATAT+AGG | - | chr4_3:23329744-23329763 | None:intergenic | 30.0% | |
ATCAGATGTCATGAAATCAT+TGG | + | chr4_3:23329997-23330016 | Msa0635140:intron | 30.0% | |
TCAGATGTCATGAAATCATT+GGG | + | chr4_3:23329998-23330017 | Msa0635140:intron | 30.0% | |
CATATTCCAATTCATTTAGC+AGG | - | chr4_3:23330089-23330108 | None:intergenic | 30.0% | |
TACAAATTATGTCAGGCTTA+GGG | - | chr4_3:23330401-23330420 | None:intergenic | 30.0% | |
TTACAAATTATGTCAGGCTT+AGG | - | chr4_3:23330402-23330421 | None:intergenic | 30.0% | |
!! | TTTCCCATGGTTTTACAAAA+TGG | + | chr4_3:23330730-23330749 | Msa0635140:intron | 30.0% |
!! | AAGCCATTTTGTAAAACCAT+GGG | - | chr4_3:23330736-23330755 | None:intergenic | 30.0% |
TTTACAAAATGGCTTCTCAT+TGG | + | chr4_3:23330741-23330760 | Msa0635140:intron | 30.0% | |
TTACAAAATGGCTTCTCATT+GGG | + | chr4_3:23330742-23330761 | Msa0635140:intron | 30.0% | |
! | AATGCTGAAAGTTTCCTTTT+TGG | + | chr4_3:23331017-23331036 | Msa0635140:intron | 30.0% |
TAAACATGACCTCATTATCA+GGG | - | chr4_3:23331059-23331078 | None:intergenic | 30.0% | |
TTAAACATGACCTCATTATC+AGG | - | chr4_3:23331060-23331079 | None:intergenic | 30.0% | |
! | TTTTCATGAAATTGTTGTCG+TGG | - | chr4_3:23331135-23331154 | None:intergenic | 30.0% |
! | GATATGGGTTTAAGATAACA+CGG | - | chr4_3:23331184-23331203 | None:intergenic | 30.0% |
!!! | TTGATCCTTCATTTTTTCTC+TGG | + | chr4_3:23331221-23331240 | Msa0635140:intron | 30.0% |
!!! | TGATCCTTCATTTTTTCTCT+GGG | + | chr4_3:23331222-23331241 | Msa0635140:intron | 30.0% |
TAAACCCAGAGAAAAAATGA+AGG | - | chr4_3:23331229-23331248 | None:intergenic | 30.0% | |
TCTCACATTGAATAGAGATA+AGG | + | chr4_3:23331473-23331492 | Msa0635140:intron | 30.0% | |
ACATTCCTCAATTTACAAGT+CGG | + | chr4_3:23331520-23331539 | Msa0635140:intron | 30.0% | |
!! | AAAAACCGACTTGTAAATTG+AGG | - | chr4_3:23331528-23331547 | None:intergenic | 30.0% |
!! | ATTTACAAGTCGGTTTTTGA+AGG | + | chr4_3:23331530-23331549 | Msa0635140:intron | 30.0% |
TTCTAATCTTGGAATATCTC+AGG | - | chr4_3:23331589-23331608 | None:intergenic | 30.0% | |
AAATGTAGACAGTTGAGAAA+AGG | + | chr4_3:23331708-23331727 | Msa0635140:intron | 30.0% | |
CCATCTTAGATTTATTCACT+GGG | + | chr4_3:23331805-23331824 | Msa0635140:CDS | 30.0% | |
! | ACTGGTATTGAAGAACAATA+TGG | - | chr4_3:23331872-23331891 | None:intergenic | 30.0% |
! | CAGATTTAAAATAGAACTGC+AGG | - | chr4_3:23331908-23331927 | None:intergenic | 30.0% |
TTAACATGAATTTGGTCCAA+TGG | + | chr4_3:23332241-23332260 | Msa0635140:intron | 30.0% | |
AGATTTAAATGAGATGCCAT+TGG | - | chr4_3:23332260-23332279 | None:intergenic | 30.0% | |
!!! | TAATCGGTTTGACCTTTTTA+CGG | + | chr4_3:23332289-23332308 | Msa0635140:intron | 30.0% |
!! | ATGAAAGATTTTGAAGGAGT+CGG | - | chr4_3:23332463-23332482 | None:intergenic | 30.0% |
! | TATTAAGCTTACTTTGCTGT+TGG | + | chr4_3:23332543-23332562 | Msa0635140:intron | 30.0% |
AACAGAGGATAATGCATTAA+AGG | + | chr4_3:23332619-23332638 | Msa0635140:intron | 30.0% | |
GGTTATAAATATCGAGTATC+AGG | - | chr4_3:23332772-23332791 | None:intergenic | 30.0% | |
ATTTCAACATCTCCTTGTAT+AGG | + | chr4_3:23333126-23333145 | Msa0635140:intron | 30.0% | |
TTTCAACATCTCCTTGTATA+GGG | + | chr4_3:23333127-23333146 | Msa0635140:intron | 30.0% | |
TTTAAATTGGCGTAATCTGT+AGG | + | chr4_3:23333554-23333573 | Msa0635140:intron | 30.0% | |
TTCAAGGCAAAATTAACAAC+GGG | - | chr4_3:23334061-23334080 | None:intergenic | 30.0% | |
! | TTTGAAGTAACCTAAGAATC+TGG | - | chr4_3:23334116-23334135 | None:intergenic | 30.0% |
GATTATTATCTCCATGTATC+TGG | + | chr4_3:23334175-23334194 | Msa0635140:CDS | 30.0% | |
TATGAATCTACTCTCTCTAA+AGG | - | chr4_3:23334331-23334350 | None:intergenic | 30.0% | |
!! | AAGGTTTTGATCTAGCAAAT+TGG | + | chr4_3:23334483-23334502 | Msa0635140:intron | 30.0% |
!! | AGGTTTTGATCTAGCAAATT+GGG | + | chr4_3:23334484-23334503 | Msa0635140:intron | 30.0% |
! | TGGAAGTACAAACAAAATAC+AGG | - | chr4_3:23334554-23334573 | None:intergenic | 30.0% |
!! | AACAAATTATAGAAGCATCG+GGG | - | chr4_3:23334632-23334651 | None:intergenic | 30.0% |
AAAGATATTGAAGATCGGAA+AGG | - | chr4_3:23334701-23334720 | None:intergenic | 30.0% | |
AACCAAATCTTAACTCTTCT+GGG | + | chr4_3:23334739-23334758 | Msa0635140:CDS | 30.0% | |
GACAACTCTCATTATTCTAA+TGG | + | chr4_3:23335098-23335117 | Msa0635140:intron | 30.0% | |
AGTAAAAATAAATGGGAGCA+GGG | - | chr4_3:23335292-23335311 | None:intergenic | 30.0% | |
TAGTAAAAATAAATGGGAGC+AGG | - | chr4_3:23335293-23335312 | None:intergenic | 30.0% | |
!!! | GTATTATTTTTACATCGCAC+AGG | - | chr4_3:23335954-23335973 | None:intergenic | 30.0% |
! | ATGACTTTTGCAACTTGAAT+TGG | + | chr4_3:23336149-23336168 | Msa0635140:CDS | 30.0% |
TTCATTCATATCATTACCAG+AGG | - | chr4_3:23336179-23336198 | None:intergenic | 30.0% | |
! | TGGTAATGATATGAATGAAG+AGG | + | chr4_3:23336180-23336199 | Msa0635140:CDS | 30.0% |
!! | ATGAAGAGGATGTTTTTCAA+AGG | + | chr4_3:23336194-23336213 | Msa0635140:CDS | 30.0% |
ACAATGCACTAAATATACAG+AGG | - | chr4_3:23336316-23336335 | None:intergenic | 30.0% | |
!! | GTCATATCCTTTGACTTTTT+AGG | + | chr4_3:23336380-23336399 | Msa0635140:intron | 30.0% |
CAAATCTTATCCCACTAAAT+GGG | + | chr4_3:23336695-23336714 | Msa0635140:intron | 30.0% | |
AAATCTTATCCCACTAAATG+GGG | + | chr4_3:23336696-23336715 | Msa0635140:intron | 30.0% | |
TGGTCCAACTCTTTAATATA+AGG | + | chr4_3:23336779-23336798 | Msa0635140:intron | 30.0% | |
ATCATCTTGGAAAAGTTCAA+AGG | - | chr4_3:23336957-23336976 | None:intergenic | 30.0% | |
GTAGCAAACTTAAAACAGAA+GGG | - | chr4_3:23337419-23337438 | None:intergenic | 30.0% | |
AGTAGCAAACTTAAAACAGA+AGG | - | chr4_3:23337420-23337439 | None:intergenic | 30.0% | |
!! | GTTATATACAAAGAGGCATT+GGG | - | chr4_3:23337490-23337509 | None:intergenic | 30.0% |
! | AGTTATATACAAAGAGGCAT+TGG | - | chr4_3:23337491-23337510 | None:intergenic | 30.0% |
TGCCTCTTTGTATATAACTA+AGG | + | chr4_3:23337492-23337511 | Msa0635140:three_prime_UTR | 30.0% | |
! | TTTGAATTGGGATTTTGCGT+CGG | - | chr4_3:23325106-23325125 | None:intergenic | 35.0% |
!! | GATGGTTCTTCGTTTTGAAT+TGG | - | chr4_3:23325119-23325138 | None:intergenic | 35.0% |
GTCAAAATCGGAGAATTCAA+TGG | + | chr4_3:23325168-23325187 | Msa0635140:CDS | 35.0% | |
! | ATGATTGGAAGGGTGAATTT+TGG | - | chr4_3:23325233-23325252 | None:intergenic | 35.0% |
! | ACTTTCGTCGCTAAAGTTTT+TGG | + | chr4_3:23325574-23325593 | Msa0635140:CDS | 35.0% |
!!! | GCTAAAGTTTTTGGAATTGC+AGG | + | chr4_3:23325583-23325602 | Msa0635140:CDS | 35.0% |
TGCTTATTCATTAGTTGACG+TGG | + | chr4_3:23325707-23325726 | Msa0635140:intron | 35.0% | |
TTAGTATAACCAACTCGGAA+CGG | + | chr4_3:23325812-23325831 | Msa0635140:intron | 35.0% | |
! | GTTTGTGTTGACAGTGTAAT+AGG | + | chr4_3:23326004-23326023 | Msa0635140:intron | 35.0% |
TGCTAGTTGTGTAAATTTGG+TGG | + | chr4_3:23326034-23326053 | Msa0635140:intron | 35.0% | |
! | AAATGGGCACATTAGTTTAG+AGG | + | chr4_3:23326123-23326142 | Msa0635140:intron | 35.0% |
TAGCTTCCATACAACATTGT+CGG | - | chr4_3:23326319-23326338 | None:intergenic | 35.0% | |
TGTTGTATGGAAGCTAGTAT+TGG | + | chr4_3:23326323-23326342 | Msa0635140:intron | 35.0% | |
GTTGTATGGAAGCTAGTATT+GGG | + | chr4_3:23326324-23326343 | Msa0635140:intron | 35.0% | |
!! | AACTTTAGAGCGAGAAAGTT+AGG | + | chr4_3:23326445-23326464 | Msa0635140:intron | 35.0% |
!! | ACTTTAGAGCGAGAAAGTTA+GGG | + | chr4_3:23326446-23326465 | Msa0635140:intron | 35.0% |
GAAAGTAGTCAAATCACTAG+AGG | + | chr4_3:23326570-23326589 | Msa0635140:intron | 35.0% | |
ATTGACAAAAATGACCGATC+TGG | - | chr4_3:23326945-23326964 | None:intergenic | 35.0% | |
CTTTATGCGACAGTATTTGT+TGG | - | chr4_3:23327105-23327124 | None:intergenic | 35.0% | |
! | CGATTCTCTTGTGTTTTTCT+AGG | + | chr4_3:23327243-23327262 | Msa0635140:intron | 35.0% |
CCTTGATGCTATAAATTGCA+TGG | - | chr4_3:23327341-23327360 | None:intergenic | 35.0% | |
CCATGCAATTTATAGCATCA+AGG | + | chr4_3:23327338-23327357 | Msa0635140:CDS | 35.0% | |
TCAGATTGAATTGACACATG+TGG | - | chr4_3:23327384-23327403 | None:intergenic | 35.0% | |
CTAGATGCAATAACACCATA+TGG | + | chr4_3:23327692-23327711 | Msa0635140:CDS | 35.0% | |
AACCAAAGCTATAGTCCATA+TGG | - | chr4_3:23327710-23327729 | None:intergenic | 35.0% | |
!! | GTTGATTTGGAGTAAAGCTT+TGG | + | chr4_3:23327955-23327974 | Msa0635140:intron | 35.0% |
!! | CTTTGGTTCCTGTTCATTTT+AGG | + | chr4_3:23327972-23327991 | Msa0635140:intron | 35.0% |
!! | TTTCTTAGTCTTGTGTGTCA+AGG | + | chr4_3:23328005-23328024 | Msa0635140:intron | 35.0% |
AAAGGAACCTGAAATTCTGT+CGG | - | chr4_3:23328327-23328346 | None:intergenic | 35.0% | |
TGCTTGAAGGTAAACAGTAA+AGG | - | chr4_3:23328345-23328364 | None:intergenic | 35.0% | |
GGATTTACTAGAATACCACT+AGG | - | chr4_3:23328630-23328649 | None:intergenic | 35.0% | |
GATTATAGAGAGTGAGCAAA+GGG | - | chr4_3:23328662-23328681 | None:intergenic | 35.0% | |
AGATTATAGAGAGTGAGCAA+AGG | - | chr4_3:23328663-23328682 | None:intergenic | 35.0% | |
CACTCTCTATAATCTGTATG+AGG | + | chr4_3:23328668-23328687 | Msa0635140:intron | 35.0% | |
ACAACTCTAAACATTGTGTC+GGG | - | chr4_3:23328725-23328744 | None:intergenic | 35.0% | |
TTATGTGACTACGAAGTTGT+AGG | + | chr4_3:23328744-23328763 | Msa0635140:intron | 35.0% | |
! | AACAATAGTAGTGATGGAGT+GGG | - | chr4_3:23328860-23328879 | None:intergenic | 35.0% |
! | AAACAATAGTAGTGATGGAG+TGG | - | chr4_3:23328861-23328880 | None:intergenic | 35.0% |
GTAAAACATGCAAAGCAAGA+AGG | + | chr4_3:23329164-23329183 | Msa0635140:intron | 35.0% | |
GGATGAACTAAATTTCCCAA+TGG | - | chr4_3:23329217-23329236 | None:intergenic | 35.0% | |
!!! | AAAGCTCCTGTTTGTTTTTG+CGG | - | chr4_3:23329481-23329500 | None:intergenic | 35.0% |
AGCCTATATAAACACATCAG+TGG | + | chr4_3:23329739-23329758 | Msa0635140:intron | 35.0% | |
TTATACAATGACAAAGGCTC+TGG | - | chr4_3:23329818-23329837 | None:intergenic | 35.0% | |
CATTTAGCAGGACAATGTTA+AGG | - | chr4_3:23330077-23330096 | None:intergenic | 35.0% | |
CATTGTCCTGCTAAATGAAT+TGG | + | chr4_3:23330080-23330099 | Msa0635140:intron | 35.0% | |
! | TCTGGCCATAATTAAGTTGT+TGG | + | chr4_3:23330174-23330193 | Msa0635140:intron | 35.0% |
! | AATTTTGTTGCCTGGTATGT+TGG | - | chr4_3:23330539-23330558 | None:intergenic | 35.0% |
! | CAAAATGGAATTTTGTTGCC+TGG | - | chr4_3:23330547-23330566 | None:intergenic | 35.0% |
!! | GAAAGTGCTATTCTGAAATG+GGG | - | chr4_3:23330714-23330733 | None:intergenic | 35.0% |
!! | GGAAAGTGCTATTCTGAAAT+GGG | - | chr4_3:23330715-23330734 | None:intergenic | 35.0% |
!! | GAAGCCATTTTGTAAAACCA+TGG | - | chr4_3:23330737-23330756 | None:intergenic | 35.0% |
GACCAAAGATCTGAATGAAA+TGG | + | chr4_3:23330825-23330844 | Msa0635140:intron | 35.0% | |
GTCCATTTCATTCAGATCTT+TGG | - | chr4_3:23330830-23330849 | None:intergenic | 35.0% | |
TAGGATTCTTTGCTTTGCTT+TGG | + | chr4_3:23330915-23330934 | Msa0635140:intron | 35.0% | |
AATTCTGACCATAAACTGCT+AGG | - | chr4_3:23330943-23330962 | None:intergenic | 35.0% | |
! | AGTGCTGTTGTGAAGAAATA+AGG | + | chr4_3:23331370-23331389 | Msa0635140:intron | 35.0% |
CTCTATTCAATGTGAGACTT+TGG | - | chr4_3:23331470-23331489 | None:intergenic | 35.0% | |
GTGAATTTGCAAATGCTGTT+GGG | + | chr4_3:23331753-23331772 | Msa0635140:CDS | 35.0% | |
GCCATCTTAGATTTATTCAC+TGG | + | chr4_3:23331804-23331823 | Msa0635140:CDS | 35.0% | |
CCCAGTGAATAAATCTAAGA+TGG | - | chr4_3:23331808-23331827 | None:intergenic | 35.0% | |
GCAGGAAAAAATGAAAAGAC+TGG | - | chr4_3:23331890-23331909 | None:intergenic | 35.0% | |
TATAAGCACCAGCAAAATGA+GGG | - | chr4_3:23332362-23332381 | None:intergenic | 35.0% | |
!! | TGAAAGATTTTGAAGGAGTC+GGG | - | chr4_3:23332462-23332481 | None:intergenic | 35.0% |
CAATTCTATCTTGTCTTGTG+TGG | + | chr4_3:23332486-23332505 | Msa0635140:intron | 35.0% | |
AAAGTTGTCTTGTGACTCAA+AGG | - | chr4_3:23332569-23332588 | None:intergenic | 35.0% | |
GTGTGATTAGTGTTAAGTCT+GGG | + | chr4_3:23333012-23333031 | Msa0635140:intron | 35.0% | |
AAAGAGCAATATGTTGCTCA+AGG | + | chr4_3:23333084-23333103 | Msa0635140:intron | 35.0% | |
AAGAGCAATATGTTGCTCAA+GGG | + | chr4_3:23333085-23333104 | Msa0635140:intron | 35.0% | |
TAGTGAAGGGCTAAATTCTA+TGG | + | chr4_3:23333208-23333227 | Msa0635140:CDS | 35.0% | |
TTGTAGGCCATAAGCATATT+GGG | - | chr4_3:23333363-23333382 | None:intergenic | 35.0% | |
GGAAACATAAAATAGGTGGA+AGG | - | chr4_3:23333783-23333802 | None:intergenic | 35.0% | |
TTCTTTAACACGTGCACTTT+GGG | + | chr4_3:23333995-23334014 | Msa0635140:intron | 35.0% | |
AATAACTTCTAACAGAAGGG+AGG | - | chr4_3:23334594-23334613 | None:intergenic | 35.0% | |
GAACCAAATCTTAACTCTTC+TGG | + | chr4_3:23334738-23334757 | Msa0635140:CDS | 35.0% | |
TCTGTTAGAAACCTTGAAAC+AGG | + | chr4_3:23334986-23335005 | Msa0635140:intron | 35.0% | |
! | CTTGAAACAGGATTTTCAGA+GGG | + | chr4_3:23334998-23335017 | Msa0635140:intron | 35.0% |
GAGAAAAACAGAGAAAGGAA+AGG | + | chr4_3:23335027-23335046 | Msa0635140:intron | 35.0% | |
ATAATGAGAGTTGTCTCCTT+AGG | - | chr4_3:23335093-23335112 | None:intergenic | 35.0% | |
!!! | CTGCCATTTGTTTTAACACT+GGG | + | chr4_3:23335391-23335410 | Msa0635140:intron | 35.0% |
GAACCCAGTGTTAAAACAAA+TGG | - | chr4_3:23335397-23335416 | None:intergenic | 35.0% | |
TCATGCAAATGGGAAAATGT+TGG | + | chr4_3:23335648-23335667 | Msa0635140:intron | 35.0% | |
!!! | AACCATGTGTAGTTTTAGGT+GGG | + | chr4_3:23335907-23335926 | Msa0635140:intron | 35.0% |
!!! | TAGTTTTAGGTGGGAAATAG+TGG | + | chr4_3:23335916-23335935 | Msa0635140:intron | 35.0% |
!!! | AGTTTTAGGTGGGAAATAGT+GGG | + | chr4_3:23335917-23335936 | Msa0635140:intron | 35.0% |
TACAGCTTAAAAGCCCAAAT+TGG | + | chr4_3:23336041-23336060 | Msa0635140:CDS | 35.0% | |
!!! | AAAAGCCCAAATTGGCTTTT+TGG | + | chr4_3:23336049-23336068 | Msa0635140:CDS | 35.0% |
AACCTTCTTCATACTTTCTC+TGG | - | chr4_3:23336075-23336094 | None:intergenic | 35.0% | |
TTCTAGTGAAACCGATATTG+AGG | + | chr4_3:23336114-23336133 | Msa0635140:CDS | 35.0% | |
TCTAGTGAAACCGATATTGA+GGG | + | chr4_3:23336115-23336134 | Msa0635140:CDS | 35.0% | |
ATATGCGGATGTTATTACGT+AGG | - | chr4_3:23336286-23336305 | None:intergenic | 35.0% | |
TACAGAGGTTATCTGATATG+CGG | - | chr4_3:23336301-23336320 | None:intergenic | 35.0% | |
! | TTAGTGCATTGTGATTTGTG+AGG | + | chr4_3:23336324-23336343 | Msa0635140:intron | 35.0% |
ACATTATGCTGAGTTATGTC+AGG | + | chr4_3:23336492-23336511 | Msa0635140:CDS | 35.0% | |
!!! | AATTTTTTTCAGGTAGGCGT+AGG | - | chr4_3:23336551-23336570 | None:intergenic | 35.0% |
!!! | CACGGAAATTTTTTTCAGGT+AGG | - | chr4_3:23336557-23336576 | None:intergenic | 35.0% |
CTACCTGAAAAAAATTTCCG+TGG | + | chr4_3:23336555-23336574 | Msa0635140:intron | 35.0% | |
!!! | ACACCACGGAAATTTTTTTC+AGG | - | chr4_3:23336561-23336580 | None:intergenic | 35.0% |
TGAAAAAAATTTCCGTGGTG+TGG | + | chr4_3:23336560-23336579 | Msa0635140:intron | 35.0% | |
GTTGTACATTTCTTGCATGT+TGG | - | chr4_3:23336666-23336685 | None:intergenic | 35.0% | |
CCATTTAGTGGGATAAGATT+TGG | - | chr4_3:23336697-23336716 | None:intergenic | 35.0% | |
CCAAATCTTATCCCACTAAA+TGG | + | chr4_3:23336694-23336713 | Msa0635140:intron | 35.0% | |
TAAAGAGTTGGACCAGAATA+TGG | - | chr4_3:23336774-23336793 | None:intergenic | 35.0% | |
GCGAAGAATTTACAAGATGA+GGG | - | chr4_3:23337115-23337134 | None:intergenic | 35.0% | |
AGCGAAGAATTTACAAGATG+AGG | - | chr4_3:23337116-23337135 | None:intergenic | 35.0% | |
! | ATGAGCTTTTGGCATGTATT+TGG | + | chr4_3:23337195-23337214 | Msa0635140:exon | 35.0% |
CGCCTTAGTTATATACAAAG+AGG | - | chr4_3:23337497-23337516 | None:intergenic | 35.0% | |
GAATGGATGAGAAGAGAGAA+CGG | - | chr4_3:23325037-23325056 | None:intergenic | 40.0% | |
TCGGAGAATTCAATGGGATT+AGG | + | chr4_3:23325175-23325194 | Msa0635140:CDS | 40.0% | |
!! | TTTTCAAGAGCGTAGGAAGA+AGG | - | chr4_3:23325271-23325290 | None:intergenic | 40.0% |
GAAAATGATACTAACCGCTC+TGG | - | chr4_3:23325311-23325330 | None:intergenic | 40.0% | |
ACGGAAGTCATGCACATAAT+TGG | + | chr4_3:23325831-23325850 | Msa0635140:intron | 40.0% | |
GTAAGACCGACAATGTTGTA+TGG | + | chr4_3:23326310-23326329 | Msa0635140:intron | 40.0% | |
CGCTTACTTTATTCTCGTGT+TGG | - | chr4_3:23326360-23326379 | None:intergenic | 40.0% | |
TGGATGTGTGGTAAAACTAG+AGG | + | chr4_3:23326403-23326422 | Msa0635140:intron | 40.0% | |
GGATGTGTGGTAAAACTAGA+GGG | + | chr4_3:23326404-23326423 | Msa0635140:intron | 40.0% | |
GATGTGTGGTAAAACTAGAG+GGG | + | chr4_3:23326405-23326424 | Msa0635140:intron | 40.0% | |
! | ATATGGTGGAAACTCTGCTT+AGG | + | chr4_3:23326487-23326506 | Msa0635140:intron | 40.0% |
GCTTTGTAGATTCTGTCGTA+AGG | + | chr4_3:23326532-23326551 | Msa0635140:intron | 40.0% | |
CGTAAGGAGAGTAGATAAGA+TGG | + | chr4_3:23326548-23326567 | Msa0635140:intron | 40.0% | |
AGTCAAATCACTAGAGGTAG+AGG | + | chr4_3:23326576-23326595 | Msa0635140:intron | 40.0% | |
GTCTCGCTTATATACCAGAT+CGG | + | chr4_3:23326928-23326947 | Msa0635140:intron | 40.0% | |
ATGTCACAGTTAACAGCCTT+GGG | - | chr4_3:23326974-23326993 | None:intergenic | 40.0% | |
AATGTCACAGTTAACAGCCT+TGG | - | chr4_3:23326975-23326994 | None:intergenic | 40.0% | |
GTTACTAAGCGCAGACAAAT+TGG | + | chr4_3:23327303-23327322 | Msa0635140:CDS | 40.0% | |
!! | CTCACTCTAAAACTGAGCTA+AGG | + | chr4_3:23327409-23327428 | Msa0635140:CDS | 40.0% |
ATCCTTGGTCAAATCAACAC+TGG | - | chr4_3:23327545-23327564 | None:intergenic | 40.0% | |
TCTCATCCGATCAAGAAGAA+GGG | + | chr4_3:23327614-23327633 | Msa0635140:CDS | 40.0% | |
! | CACCATATGGACTATAGCTT+TGG | + | chr4_3:23327705-23327724 | Msa0635140:CDS | 40.0% |
!! | TGGACTATAGCTTTGGTTCA+TGG | + | chr4_3:23327712-23327731 | Msa0635140:CDS | 40.0% |
!! | CTTTGGTTCATGGCCATTTT+AGG | + | chr4_3:23327722-23327741 | Msa0635140:CDS | 40.0% |
CAATGCTCATTGTCTCTTCT+TGG | + | chr4_3:23328249-23328268 | Msa0635140:intron | 40.0% | |
ATATGATGTCGGTAGATGAG+TGG | + | chr4_3:23328411-23328430 | Msa0635140:intron | 40.0% | |
ATACCACTAGGGGAATCTAA+AGG | - | chr4_3:23328618-23328637 | None:intergenic | 40.0% | |
!! | GAAGTTGTAGGTTCAAGTTG+TGG | + | chr4_3:23328756-23328775 | Msa0635140:intron | 40.0% |
CCTTATCTTGCATTTGCAAG+AGG | - | chr4_3:23328788-23328807 | None:intergenic | 40.0% | |
CCTCTTGCAAATGCAAGATA+AGG | + | chr4_3:23328785-23328804 | Msa0635140:intron | 40.0% | |
AACAGGATTTAAGCCACTGA+GGG | - | chr4_3:23328825-23328844 | None:intergenic | 40.0% | |
AAACAGGATTTAAGCCACTG+AGG | - | chr4_3:23328826-23328845 | None:intergenic | 40.0% | |
! | GATTTTTATGCGCGCTTATG+TGG | + | chr4_3:23328990-23329009 | Msa0635140:intron | 40.0% |
! | TGATGGACCTAGAAAGTTGT+GGG | - | chr4_3:23329020-23329039 | None:intergenic | 40.0% |
! | GTGCTATTAAGTTCACACCA+TGG | - | chr4_3:23329050-23329069 | None:intergenic | 40.0% |
TTGACAACGCTGAAACCATT+GGG | + | chr4_3:23329199-23329218 | Msa0635140:intron | 40.0% | |
CATTCACCGCAAAAACAAAC+AGG | + | chr4_3:23329472-23329491 | Msa0635140:intron | 40.0% | |
TGTCCCATTAGTCATTAGTC+AGG | + | chr4_3:23329700-23329719 | Msa0635140:intron | 40.0% | |
TATTGTGTGCAGTGTCTATC+TGG | + | chr4_3:23330156-23330175 | Msa0635140:intron | 40.0% | |
ATTGTCCTTGATGAAGAAGC+TGG | + | chr4_3:23330291-23330310 | Msa0635140:CDS | 40.0% | |
GAGATATGATCCAACATACC+AGG | + | chr4_3:23330526-23330545 | Msa0635140:CDS | 40.0% | |
TCTCAGCAAGGTCTTCAAAA+TGG | - | chr4_3:23330562-23330581 | None:intergenic | 40.0% | |
!! | TGCTATTCTGAAATGGGGAT+GGG | - | chr4_3:23330709-23330728 | None:intergenic | 40.0% |
!! | GGGAAAGTGCTATTCTGAAA+TGG | - | chr4_3:23330716-23330735 | None:intergenic | 40.0% |
TTCAGAATAGCACTTTCCCA+TGG | + | chr4_3:23330717-23330736 | Msa0635140:intron | 40.0% | |
! | CTTTGGTTCCTAGCAGTTTA+TGG | + | chr4_3:23330932-23330951 | Msa0635140:intron | 40.0% |
CCTAACATCAGCAACCAAAA+AGG | - | chr4_3:23331034-23331053 | None:intergenic | 40.0% | |
!!! | CCTTTTTGGTTGCTGATGTT+AGG | + | chr4_3:23331031-23331050 | Msa0635140:intron | 40.0% |
! | TGTTAGGATCCCTGATAATG+AGG | + | chr4_3:23331047-23331066 | Msa0635140:intron | 40.0% |
TTTCTCTGGGTTTAGTAGTG+TGG | + | chr4_3:23331235-23331254 | Msa0635140:intron | 40.0% | |
CGTGAATTTGCAAATGCTGT+TGG | + | chr4_3:23331752-23331771 | Msa0635140:CDS | 40.0% | |
CACAAGTTTGCAAAAACGTG+AGG | + | chr4_3:23331833-23331852 | Msa0635140:intron | 40.0% | |
!! | GACTTGCTTTGAAAACAGCA+GGG | - | chr4_3:23331947-23331966 | None:intergenic | 40.0% |
!!! | CTGCTGTTTTCAAAGCAAGT+CGG | + | chr4_3:23331946-23331965 | Msa0635140:intron | 40.0% |
TCCTAGAACTGCCAAAACAT+TGG | - | chr4_3:23331972-23331991 | None:intergenic | 40.0% | |
TTTGCCCTCTTTACGATGTT+GGG | - | chr4_3:23332046-23332065 | None:intergenic | 40.0% | |
AAGAGTAATCGAACAAGCAC+AGG | + | chr4_3:23332067-23332086 | Msa0635140:CDS | 40.0% | |
GGAGAAACAGAACCGTAAAA+AGG | - | chr4_3:23332304-23332323 | None:intergenic | 40.0% | |
AATAGTCCAATCATCCAAGG+CGG | - | chr4_3:23332325-23332344 | None:intergenic | 40.0% | |
GAGAATAGTCCAATCATCCA+AGG | - | chr4_3:23332328-23332347 | None:intergenic | 40.0% | |
GTATAAGCACCAGCAAAATG+AGG | - | chr4_3:23332363-23332382 | None:intergenic | 40.0% | |
TACACTACCATAGGTGGTTT+GGG | - | chr4_3:23332404-23332423 | None:intergenic | 40.0% | |
TTACACTACCATAGGTGGTT+TGG | - | chr4_3:23332405-23332424 | None:intergenic | 40.0% | |
! | AAACCACCTATGGTAGTGTA+AGG | + | chr4_3:23332404-23332423 | Msa0635140:intron | 40.0% |
AGTCTACCTTACACTACCAT+AGG | - | chr4_3:23332413-23332432 | None:intergenic | 40.0% | |
!! | GAAAGATTTTGAAGGAGTCG+GGG | - | chr4_3:23332461-23332480 | None:intergenic | 40.0% |
TTGTCATGTGTACTGTATCG+TGG | + | chr4_3:23332587-23332606 | Msa0635140:intron | 40.0% | |
! | GATTGGTGGTAGTTTGTCAA+TGG | + | chr4_3:23332987-23333006 | Msa0635140:intron | 40.0% |
GGTGTGATTAGTGTTAAGTC+TGG | + | chr4_3:23333011-23333030 | Msa0635140:intron | 40.0% | |
! | GATACACCACATTTTCAGAG+TGG | + | chr4_3:23333290-23333309 | Msa0635140:CDS | 40.0% |
! | AGAACTCCACTCTGAAAATG+TGG | - | chr4_3:23333299-23333318 | None:intergenic | 40.0% |
CATATTGGGCGACATTTGTA+CGG | - | chr4_3:23333349-23333368 | None:intergenic | 40.0% | |
AATGTCGCCCAATATGCTTA+TGG | + | chr4_3:23333353-23333372 | Msa0635140:CDS | 40.0% | |
CTTGTAGGCCATAAGCATAT+TGG | - | chr4_3:23333364-23333383 | None:intergenic | 40.0% | |
TTTGTCTGATGTGCCAAAAG+TGG | + | chr4_3:23333412-23333431 | Msa0635140:CDS | 40.0% | |
! | TAGTATTGCAGCAGCTCTAA+TGG | + | chr4_3:23333445-23333464 | Msa0635140:CDS | 40.0% |
ATTTACAGGTGTTTCCAGAG+AGG | + | chr4_3:23333642-23333661 | Msa0635140:intron | 40.0% | |
TACAGTAATGCTTACACGGA+TGG | + | chr4_3:23333725-23333744 | Msa0635140:CDS | 40.0% | |
TCTTGCAACTTGTGCACTAA+TGG | + | chr4_3:23333867-23333886 | Msa0635140:intron | 40.0% | |
GTTCTTTAACACGTGCACTT+TGG | + | chr4_3:23333994-23334013 | Msa0635140:intron | 40.0% | |
AGAATCTGGCAATGGAACAA+TGG | - | chr4_3:23334102-23334121 | None:intergenic | 40.0% | |
TGTTCCATTGCCAGATTCTT+AGG | + | chr4_3:23334103-23334122 | Msa0635140:intron | 40.0% | |
GTAACCTAAGAATCTGGCAA+TGG | - | chr4_3:23334110-23334129 | None:intergenic | 40.0% | |
CTTAGGTTACTTCAAACCAC+AGG | + | chr4_3:23334120-23334139 | Msa0635140:CDS | 40.0% | |
TATCTCCATGTATCTGGCAT+TGG | + | chr4_3:23334181-23334200 | Msa0635140:CDS | 40.0% | |
CGGAGATTTCCCTATATGTA+CGG | + | chr4_3:23334378-23334397 | Msa0635140:intron | 40.0% | |
ACTGTAGTGCCGTACATATA+GGG | - | chr4_3:23334390-23334409 | None:intergenic | 40.0% | |
CAGGATAAGGACAACTTGAA+GGG | - | chr4_3:23334535-23334554 | None:intergenic | 40.0% | |
ACAGGATAAGGACAACTTGA+AGG | - | chr4_3:23334536-23334555 | None:intergenic | 40.0% | |
!! | AATTATAGAAGCATCGGGGA+TGG | - | chr4_3:23334628-23334647 | None:intergenic | 40.0% |
CTCCCAGAAGAGTTAAGATT+TGG | - | chr4_3:23334744-23334763 | None:intergenic | 40.0% | |
ATAAGACATTACGCTGCATC+AGG | - | chr4_3:23334939-23334958 | None:intergenic | 40.0% | |
! | CCTCTGAAAATCCTGTTTCA+AGG | - | chr4_3:23335000-23335019 | None:intergenic | 40.0% |
! | CCTTGAAACAGGATTTTCAG+AGG | + | chr4_3:23334997-23335016 | Msa0635140:intron | 40.0% |
! | TGGTTTCCCCTTTTATAGCA+CGG | + | chr4_3:23335118-23335137 | Msa0635140:intron | 40.0% |
CATATGCCGTGCTATAAAAG+GGG | - | chr4_3:23335127-23335146 | None:intergenic | 40.0% | |
GCATATGCCGTGCTATAAAA+GGG | - | chr4_3:23335128-23335147 | None:intergenic | 40.0% | |
AGCATATGCCGTGCTATAAA+AGG | - | chr4_3:23335129-23335148 | None:intergenic | 40.0% | |
ATAGGAGCAAGATAGAAGGA+AGG | - | chr4_3:23335179-23335198 | None:intergenic | 40.0% | |
CGTAATAGGAGCAAGATAGA+AGG | - | chr4_3:23335183-23335202 | None:intergenic | 40.0% | |
AGTACAGTGGTCTACGTAAT+AGG | - | chr4_3:23335197-23335216 | None:intergenic | 40.0% | |
CCAGTGTTAAAACAAATGGC+AGG | - | chr4_3:23335393-23335412 | None:intergenic | 40.0% | |
!!! | CCTGCCATTTGTTTTAACAC+TGG | + | chr4_3:23335390-23335409 | Msa0635140:intron | 40.0% |
CATCATAAATCACCAAGCAG+AGG | - | chr4_3:23335425-23335444 | None:intergenic | 40.0% | |
TGACCAATACAACTCGGTAA+TGG | - | chr4_3:23335491-23335510 | None:intergenic | 40.0% | |
TCATGCTGACCAATACAACT+CGG | - | chr4_3:23335497-23335516 | None:intergenic | 40.0% | |
AAAACTACACATGGTTGGCA+GGG | - | chr4_3:23335903-23335922 | None:intergenic | 40.0% | |
TAAAACTACACATGGTTGGC+AGG | - | chr4_3:23335904-23335923 | None:intergenic | 40.0% | |
! | TGCCAACCATGTGTAGTTTT+AGG | + | chr4_3:23335903-23335922 | Msa0635140:intron | 40.0% |
CACCTAAAACTACACATGGT+TGG | - | chr4_3:23335908-23335927 | None:intergenic | 40.0% | |
!!! | CAACCATGTGTAGTTTTAGG+TGG | + | chr4_3:23335906-23335925 | Msa0635140:intron | 40.0% |
TTCCCACCTAAAACTACACA+TGG | - | chr4_3:23335912-23335931 | None:intergenic | 40.0% | |
! | GCTTTTAAGCTGTATCTCAC+TGG | - | chr4_3:23336035-23336054 | None:intergenic | 40.0% |
TCTGGCCAAAAAGCCAATTT+GGG | - | chr4_3:23336057-23336076 | None:intergenic | 40.0% | |
!! | AACTTGAATTGGCTTTCCTC+TGG | + | chr4_3:23336160-23336179 | Msa0635140:CDS | 40.0% |
TTCATCTTGATCACCAAGGA+GGG | - | chr4_3:23336455-23336474 | None:intergenic | 40.0% | |
TTTCATCTTGATCACCAAGG+AGG | - | chr4_3:23336456-23336475 | None:intergenic | 40.0% | |
TGCTTTCATCTTGATCACCA+AGG | - | chr4_3:23336459-23336478 | None:intergenic | 40.0% | |
! | GGATCTTGGTGTAGTAATGA+CGG | + | chr4_3:23336581-23336600 | Msa0635140:intron | 40.0% |
! | GATCTTGGTGTAGTAATGAC+GGG | + | chr4_3:23336582-23336601 | Msa0635140:intron | 40.0% |
ATATAACGCGAGTAAGACCA+AGG | - | chr4_3:23336630-23336649 | None:intergenic | 40.0% | |
! | GTAGAAGTAGATGAAGGTGT+GGG | - | chr4_3:23336925-23336944 | None:intergenic | 40.0% |
TGTAGAAGTAGATGAAGGTG+TGG | - | chr4_3:23336926-23336945 | None:intergenic | 40.0% | |
ACACCTTCATCTACTTCTAC+AGG | + | chr4_3:23336925-23336944 | Msa0635140:intron | 40.0% | |
CACCTTCATCTACTTCTACA+GGG | + | chr4_3:23336926-23336945 | Msa0635140:intron | 40.0% | |
TCTTGGAAAAGTTCAAAGGC+AGG | - | chr4_3:23336953-23336972 | None:intergenic | 40.0% | |
GCTCTCTTTCATGATCATCT+TGG | - | chr4_3:23336970-23336989 | None:intergenic | 40.0% | |
! | CTAAAGGAGTATGACCAAGT+TGG | + | chr4_3:23337070-23337089 | Msa0635140:CDS | 40.0% |
CCAAAAGCTCATCATATCCT+GGG | - | chr4_3:23337187-23337206 | None:intergenic | 40.0% | |
AGGAAGAGAAGGTTGTGGAA+TGG | - | chr4_3:23325054-23325073 | None:intergenic | 45.0% | |
! | GTTCTGGTGGATGATTGGAA+GGG | - | chr4_3:23325243-23325262 | None:intergenic | 45.0% |
! | AGTTCTGGTGGATGATTGGA+AGG | - | chr4_3:23325244-23325263 | None:intergenic | 45.0% |
! | ATCGAGTTCTGGTGGATGAT+TGG | - | chr4_3:23325248-23325267 | None:intergenic | 45.0% |
TAGGAAGAAGGATCGAGTTC+TGG | - | chr4_3:23325259-23325278 | None:intergenic | 45.0% | |
CAAACTCTACGAAACCAGAG+CGG | + | chr4_3:23325294-23325313 | Msa0635140:CDS | 45.0% | |
! | TCCTGTTTTGTATTCGCAGC+AGG | + | chr4_3:23325495-23325514 | Msa0635140:CDS | 45.0% |
TCCTGCTGCGAATACAAAAC+AGG | - | chr4_3:23325499-23325518 | None:intergenic | 45.0% | |
AAGTAAGCGTAGCAGAGATG+AGG | + | chr4_3:23326371-23326390 | Msa0635140:intron | 45.0% | |
GTGGTAAAACTAGAGGGGAT+AGG | + | chr4_3:23326410-23326429 | Msa0635140:intron | 45.0% | |
! | GGATTGGGAGCTGATCATTT+TGG | + | chr4_3:23327149-23327168 | Msa0635140:intron | 45.0% |
!! | GTCCAGTGTTGATTTGACCA+AGG | + | chr4_3:23327540-23327559 | Msa0635140:CDS | 45.0% |
GTCTCATCCGATCAAGAAGA+AGG | + | chr4_3:23327613-23327632 | Msa0635140:CDS | 45.0% | |
TGGCATCCCTTCTTCTTGAT+CGG | - | chr4_3:23327623-23327642 | None:intergenic | 45.0% | |
TGCTCATTGTCTCTTCTTGG+TGG | + | chr4_3:23328252-23328271 | Msa0635140:intron | 45.0% | |
! | TCTTGGTGGCTGTGCAATAA+TGG | + | chr4_3:23328266-23328285 | Msa0635140:intron | 45.0% |
! | CTTGGTGGCTGTGCAATAAT+GGG | + | chr4_3:23328267-23328286 | Msa0635140:intron | 45.0% |
GGTCTATCCGACAGAATTTC+AGG | + | chr4_3:23328317-23328336 | Msa0635140:intron | 45.0% | |
GTGAGCAAAGGGAGAGAAAT+GGG | - | chr4_3:23328651-23328670 | None:intergenic | 45.0% | |
AGTGAGCAAAGGGAGAGAAA+TGG | - | chr4_3:23328652-23328671 | None:intergenic | 45.0% | |
! | AATAGTAGTGATGGAGTGGG+AGG | - | chr4_3:23328857-23328876 | None:intergenic | 45.0% |
!! | GTGATGGACCTAGAAAGTTG+TGG | - | chr4_3:23329021-23329040 | None:intergenic | 45.0% |
GGTGTGAACTTAATAGCACC+AGG | + | chr4_3:23329051-23329070 | Msa0635140:intron | 45.0% | |
GTTGACAACGCTGAAACCAT+TGG | + | chr4_3:23329198-23329217 | Msa0635140:intron | 45.0% | |
!! | TAGCTTGTTTGGAATAGCGG+TGG | + | chr4_3:23329360-23329379 | Msa0635140:intron | 45.0% |
GGGCCTGACTAATGACTAAT+GGG | - | chr4_3:23329706-23329725 | None:intergenic | 45.0% | |
TGGGCCTGACTAATGACTAA+TGG | - | chr4_3:23329707-23329726 | None:intergenic | 45.0% | |
AGTCATTAGTCAGGCCCATT+AGG | + | chr4_3:23329709-23329728 | Msa0635140:intron | 45.0% | |
AGGCTCGCTTATCGATCTTT+GGG | + | chr4_3:23329862-23329881 | Msa0635140:intron | 45.0% | |
! | TCGCTTATCGATCTTTGGGA+GGG | + | chr4_3:23329866-23329885 | Msa0635140:CDS | 45.0% |
!! | GACGCTCTAGACATTTTGCA+GGG | + | chr4_3:23329913-23329932 | Msa0635140:CDS | 45.0% |
! | CTAGACATTTTGCAGGGACA+CGG | + | chr4_3:23329919-23329938 | Msa0635140:CDS | 45.0% |
AAAAGGGGAGTGAATGATCG+AGG | + | chr4_3:23330237-23330256 | Msa0635140:CDS | 45.0% | |
AAAGGGGAGTGAATGATCGA+GGG | + | chr4_3:23330238-23330257 | Msa0635140:CDS | 45.0% | |
AGTTCAGTTGTGCAAATGCG+TGG | + | chr4_3:23330333-23330352 | Msa0635140:CDS | 45.0% | |
GCTTCTTGTGACCAGAAAAG+CGG | - | chr4_3:23330366-23330385 | None:intergenic | 45.0% | |
TGCACTGGAAGTCAAAACAG+GGG | - | chr4_3:23330506-23330525 | None:intergenic | 45.0% | |
CTGCACTGGAAGTCAAAACA+GGG | - | chr4_3:23330507-23330526 | None:intergenic | 45.0% | |
TCTGCACTGGAAGTCAAAAC+AGG | - | chr4_3:23330508-23330527 | None:intergenic | 45.0% | |
GTTGGATCATATCTCTGCAC+TGG | - | chr4_3:23330521-23330540 | None:intergenic | 45.0% | |
GAAGACCTTGCTGAGAGATA+TGG | + | chr4_3:23330566-23330585 | Msa0635140:CDS | 45.0% | |
GATTGCCATATCTCTCAGCA+AGG | - | chr4_3:23330574-23330593 | None:intergenic | 45.0% | |
!! | GCTATTCTGAAATGGGGATG+GGG | - | chr4_3:23330708-23330727 | None:intergenic | 45.0% |
!! | GTGCTATTCTGAAATGGGGA+TGG | - | chr4_3:23330710-23330729 | None:intergenic | 45.0% |
! | AATCTAAGATGGCTCTCTGC+TGG | - | chr4_3:23331797-23331816 | None:intergenic | 45.0% |
!! | CGACTTGCTTTGAAAACAGC+AGG | - | chr4_3:23331948-23331967 | None:intergenic | 45.0% |
! | AAGCAAGTCGGCCAATGTTT+TGG | + | chr4_3:23331958-23331977 | Msa0635140:intron | 45.0% |
!!! | GCCAATGTTTTGGCAGTTCT+AGG | + | chr4_3:23331968-23331987 | Msa0635140:CDS | 45.0% |
CAAGCCCAACATCGTAAAGA+GGG | + | chr4_3:23332039-23332058 | Msa0635140:CDS | 45.0% | |
GTTTGCCCTCTTTACGATGT+TGG | - | chr4_3:23332047-23332066 | None:intergenic | 45.0% | |
GTAATCGAACAAGCACAGGA+AGG | + | chr4_3:23332071-23332090 | Msa0635140:CDS | 45.0% | |
GTGATCTGTGTAGACAACAC+CGG | - | chr4_3:23332205-23332224 | None:intergenic | 45.0% | |
CAAAATGAGGGTGGATGAGA+TGG | - | chr4_3:23332350-23332369 | None:intergenic | 45.0% | |
CTACCTTACACTACCATAGG+TGG | - | chr4_3:23332410-23332429 | None:intergenic | 45.0% | |
GGAAGAGTTAGAGCTCTTGT+AGG | - | chr4_3:23332844-23332863 | None:intergenic | 45.0% | |
!! | ACTCTTCCCTTGACTTGTCA+TGG | + | chr4_3:23332856-23332875 | Msa0635140:intron | 45.0% |
!! | TTCCCTTGACTTGTCATGGT+GGG | + | chr4_3:23332860-23332879 | Msa0635140:intron | 45.0% |
! | TCATGGTGGGAGACAACATT+GGG | + | chr4_3:23332873-23332892 | Msa0635140:intron | 45.0% |
AATCCGTATGTCACTAGGCA+CGG | - | chr4_3:23332971-23332990 | None:intergenic | 45.0% | |
! | TGGTGGTAGTTTGTCAATGG+TGG | + | chr4_3:23332990-23333009 | Msa0635140:intron | 45.0% |
! | CAACGAAGCATCCCTATACA+AGG | - | chr4_3:23333141-23333160 | None:intergenic | 45.0% |
AGAGATCTGACAGCTAGTTC+TGG | + | chr4_3:23333161-23333180 | Msa0635140:CDS | 45.0% | |
! | GAGATCTGACAGCTAGTTCT+GGG | + | chr4_3:23333162-23333181 | Msa0635140:CDS | 45.0% |
!! | AGATCTGACAGCTAGTTCTG+GGG | + | chr4_3:23333163-23333182 | Msa0635140:CDS | 45.0% |
AGGCTTGGAATCAGTAGTGA+AGG | + | chr4_3:23333194-23333213 | Msa0635140:CDS | 45.0% | |
GGCTTGGAATCAGTAGTGAA+GGG | + | chr4_3:23333195-23333214 | Msa0635140:CDS | 45.0% | |
! | AGCAGTCAATGCAGTTGGTA+CGG | - | chr4_3:23333322-23333341 | None:intergenic | 45.0% |
!! | TACCAACTGCATTGACTGCT+TGG | + | chr4_3:23333322-23333341 | Msa0635140:CDS | 45.0% |
GCTTATGGCCTACAAGCTTT+AGG | + | chr4_3:23333368-23333387 | Msa0635140:CDS | 45.0% | |
ACAAACCCATTGCATGAAGC+TGG | - | chr4_3:23333397-23333416 | None:intergenic | 45.0% | |
! | CTACTGTCAGGATCCACTTT+TGG | - | chr4_3:23333428-23333447 | None:intergenic | 45.0% |
GGTTACTTCAAACCACAGGA+AGG | + | chr4_3:23334124-23334143 | Msa0635140:CDS | 45.0% | |
AGGAAGGAAAACCTGCTCTA+TGG | + | chr4_3:23334140-23334159 | Msa0635140:CDS | 45.0% | |
GGAAGGAAAACCTGCTCTAT+GGG | + | chr4_3:23334141-23334160 | Msa0635140:CDS | 45.0% | |
CATCTCCAATGCCAGATACA+TGG | - | chr4_3:23334189-23334208 | None:intergenic | 45.0% | |
TTATTCTCAATCCCCACGTG+CGG | + | chr4_3:23334358-23334377 | Msa0635140:intron | 45.0% | |
CACTGTAGTGCCGTACATAT+AGG | - | chr4_3:23334391-23334410 | None:intergenic | 45.0% | |
CAAGTTGTCATCAGAGCACA+AGG | + | chr4_3:23334464-23334483 | Msa0635140:intron | 45.0% | |
GATAAGGACAACTTGAAGGG+AGG | - | chr4_3:23334532-23334551 | None:intergenic | 45.0% | |
! | CTTAACTCTTCTGGGAGAGA+CGG | + | chr4_3:23334747-23334766 | Msa0635140:CDS | 45.0% |
GAGAAATCATCTCTGCAAGC+TGG | - | chr4_3:23334792-23334811 | None:intergenic | 45.0% | |
! | AACAGGATTTTCAGAGGGAG+CGG | + | chr4_3:23335003-23335022 | Msa0635140:intron | 45.0% |
GCGGTGAGAAAAACAGAGAA+AGG | + | chr4_3:23335022-23335041 | Msa0635140:intron | 45.0% | |
GGATGGATAGTTCAGTACAG+TGG | - | chr4_3:23335210-23335229 | None:intergenic | 45.0% | |
AAATCACCAAGCAGAGGTAG+AGG | - | chr4_3:23335419-23335438 | None:intergenic | 45.0% | |
! | CCAATACAACTCGGTAATGG+AGG | - | chr4_3:23335488-23335507 | None:intergenic | 45.0% |
CCTCCATTACCGAGTTGTAT+TGG | + | chr4_3:23335485-23335504 | Msa0635140:intron | 45.0% | |
! | TTTAGGTGGGAAATAGTGGG+TGG | + | chr4_3:23335920-23335939 | Msa0635140:intron | 45.0% |
TACGTGCTCTTGATATCGAG+AGG | + | chr4_3:23335971-23335990 | Msa0635140:intron | 45.0% | |
CTCTGGCCAAAAAGCCAATT+TGG | - | chr4_3:23336058-23336077 | None:intergenic | 45.0% | |
! | GGCCAGAGAAAGTATGAAGA+AGG | + | chr4_3:23336070-23336089 | Msa0635140:CDS | 45.0% |
! | AGAAGCAACTTTTGCAGCAG+AGG | - | chr4_3:23336098-23336117 | None:intergenic | 45.0% |
AACCGATATTGAGGGATGTC+AGG | + | chr4_3:23336123-23336142 | Msa0635140:CDS | 45.0% | |
AGCCTGACATCCCTCAATAT+CGG | - | chr4_3:23336128-23336147 | None:intergenic | 45.0% | |
GAACGTGCATTATCCTCACA+AGG | + | chr4_3:23336227-23336246 | Msa0635140:intron | 45.0% | |
! | GTGAACATCTAAGCCTTGTG+AGG | - | chr4_3:23336243-23336262 | None:intergenic | 45.0% |
! | AACGAGTCCAATGGTTGGTA+CGG | + | chr4_3:23336424-23336443 | Msa0635140:CDS | 45.0% |
AATTTCCGTGGTGTGGATCT+TGG | + | chr4_3:23336567-23336586 | Msa0635140:intron | 45.0% | |
CTTATCCCACTAAATGGGGT+CGG | + | chr4_3:23336700-23336719 | Msa0635140:intron | 45.0% | |
GTCCCTGTAGAAGTAGATGA+AGG | - | chr4_3:23336931-23336950 | None:intergenic | 45.0% | |
TGAAAGAGAGCAACACTACG+CGG | + | chr4_3:23336979-23336998 | Msa0635140:CDS | 45.0% | |
! | AGAGATGGAAGCAGCTCTAA+AGG | + | chr4_3:23337054-23337073 | Msa0635140:CDS | 45.0% |
AAGATGAGGGAATGATCCCA+AGG | - | chr4_3:23337102-23337121 | None:intergenic | 45.0% | |
TCTTCGCTGATGATCCAAGT+TGG | + | chr4_3:23337128-23337147 | Msa0635140:CDS | 45.0% | |
!! | ATGATCCAAGTTGGTTGACG+AGG | + | chr4_3:23337137-23337156 | Msa0635140:CDS | 45.0% |
TGGTTGACGAGGTGGTTAAT+TGG | + | chr4_3:23337148-23337167 | Msa0635140:CDS | 45.0% | |
GGTTGACGAGGTGGTTAATT+GGG | + | chr4_3:23337149-23337168 | Msa0635140:CDS | 45.0% | |
GTTGACGAGGTGGTTAATTG+GGG | + | chr4_3:23337150-23337169 | Msa0635140:CDS | 45.0% | |
! | CCCAGGATATGATGAGCTTT+TGG | + | chr4_3:23337184-23337203 | Msa0635140:exon | 45.0% |
GCCAAAAGCTCATCATATCC+TGG | - | chr4_3:23337188-23337207 | None:intergenic | 45.0% | |
!!! | TATCTTTTTATATTTAAATT+TGG | + | chr4_3:23326745-23326764 | Msa0635140:intron | 5.0% |
!!! | AAAGTATTTAAATTTAAATA+TGG | - | chr4_3:23334036-23334055 | None:intergenic | 5.0% |
!! | TTATAATTTGAATATTTAAA+GGG | - | chr4_3:23335231-23335250 | None:intergenic | 5.0% |
!! | TTTATAATTTGAATATTTAA+AGG | - | chr4_3:23335232-23335251 | None:intergenic | 5.0% |
!! | TTAATATAGTAAAAATAAAT+GGG | - | chr4_3:23335299-23335318 | None:intergenic | 5.0% |
!! | TTTAATATAGTAAAAATAAA+TGG | - | chr4_3:23335300-23335319 | None:intergenic | 5.0% |
GTGGTTGAGACTTGTAGGTG+GGG | - | chr4_3:23324997-23325016 | None:intergenic | 50.0% | |
GGTGGTTGAGACTTGTAGGT+GGG | - | chr4_3:23324998-23325017 | None:intergenic | 50.0% | |
TGGTGGTTGAGACTTGTAGG+TGG | - | chr4_3:23324999-23325018 | None:intergenic | 50.0% | |
!! | GGTTGGTGGTTGAGACTTGT+AGG | - | chr4_3:23325002-23325021 | None:intergenic | 50.0% |
CAAGTCTCAACCACCAACCA+TGG | + | chr4_3:23325003-23325022 | Msa0635140:five_prime_UTR | 50.0% | |
!!! | ATTTTGCGTCGGTGTTGTGG+TGG | - | chr4_3:23325095-23325114 | None:intergenic | 50.0% |
! | GAAGAAGGATCGAGTTCTGG+TGG | - | chr4_3:23325256-23325275 | None:intergenic | 50.0% |
ACCGGTAGCTCGATTACCTT+CGG | - | chr4_3:23325548-23325567 | None:intergenic | 50.0% | |
AGCGACGAAAGTAAGTCCAC+CGG | - | chr4_3:23325566-23325585 | None:intergenic | 50.0% | |
CGTAGCAGAGATGAGGATGT+TGG | + | chr4_3:23326378-23326397 | Msa0635140:intron | 50.0% | |
CAGAGATGAGGATGTTGGAC+TGG | + | chr4_3:23326383-23326402 | Msa0635140:intron | 50.0% | |
! | AGGATGTTGGACTGGATGTG+TGG | + | chr4_3:23326391-23326410 | Msa0635140:intron | 50.0% |
TGGTGGAAACTCTGCTTAGG+TGG | + | chr4_3:23326490-23326509 | Msa0635140:intron | 50.0% | |
GAAACTCTGCTTAGGTGGTC+TGG | + | chr4_3:23326495-23326514 | Msa0635140:intron | 50.0% | |
CTACAAAGCTTCTCTCCACG+TGG | - | chr4_3:23326521-23326540 | None:intergenic | 50.0% | |
!! | GGTTCATGGCCATTTTAGGC+AGG | + | chr4_3:23327726-23327745 | Msa0635140:CDS | 50.0% |
TGGCCTTTAGATTCCCCTAG+TGG | + | chr4_3:23328612-23328631 | Msa0635140:intron | 50.0% | |
GTGGGAGGTTGACTAGAAAC+AGG | - | chr4_3:23328842-23328861 | None:intergenic | 50.0% | |
TGGTGCTCCCACAACTTTCT+AGG | + | chr4_3:23329010-23329029 | Msa0635140:intron | 50.0% | |
AGGTCCATCACTACTAGCCA+TGG | + | chr4_3:23329030-23329049 | Msa0635140:intron | 50.0% | |
CACACCATGGCTAGTAGTGA+TGG | - | chr4_3:23329037-23329056 | None:intergenic | 50.0% | |
CAGGCTCGCTTATCGATCTT+TGG | + | chr4_3:23329861-23329880 | Msa0635140:intron | 50.0% | |
CTCGCTTATCGATCTTTGGG+AGG | + | chr4_3:23329865-23329884 | Msa0635140:CDS | 50.0% | |
!! | CGACGCTCTAGACATTTTGC+AGG | + | chr4_3:23329912-23329931 | Msa0635140:CDS | 50.0% |
AGCAGCCAGCTTCTTCATCA+AGG | - | chr4_3:23330299-23330318 | None:intergenic | 50.0% | |
!! | GTGGATCGATACCGCTTTTC+TGG | + | chr4_3:23330352-23330371 | Msa0635140:CDS | 50.0% |
GGGGGAGACAAAAGATCGAA+AGG | - | chr4_3:23330487-23330506 | None:intergenic | 50.0% | |
GCACTGGAAGTCAAAACAGG+GGG | - | chr4_3:23330505-23330524 | None:intergenic | 50.0% | |
CTGAAATGGGGATGGGGAAA+TGG | - | chr4_3:23330702-23330721 | None:intergenic | 50.0% | |
GGCTCTCTGCTGGTAGAATT+TGG | - | chr4_3:23331787-23331806 | None:intergenic | 50.0% | |
GCAAGCCCAACATCGTAAAG+AGG | + | chr4_3:23332038-23332057 | Msa0635140:CDS | 50.0% | |
TCGAACAAGCACAGGAAGGT+AGG | + | chr4_3:23332075-23332094 | Msa0635140:intron | 50.0% | |
GTTTCTCCGCCTTGGATGAT+TGG | + | chr4_3:23332316-23332335 | Msa0635140:intron | 50.0% | |
! | CTCATCCACCCTCATTTTGC+TGG | + | chr4_3:23332351-23332370 | Msa0635140:intron | 50.0% |
AAGCACCAGCAAAATGAGGG+TGG | - | chr4_3:23332359-23332378 | None:intergenic | 50.0% | |
! | TAGGTGGTTTGGGCAACGAT+GGG | - | chr4_3:23332394-23332413 | None:intergenic | 50.0% |
! | ATAGGTGGTTTGGGCAACGA+TGG | - | chr4_3:23332395-23332414 | None:intergenic | 50.0% |
ATCGTTGCCCAAACCACCTA+TGG | + | chr4_3:23332394-23332413 | Msa0635140:intron | 50.0% | |
TCGTGGAGAGTGAACAACAG+AGG | + | chr4_3:23332604-23332623 | Msa0635140:intron | 50.0% | |
!! | CTTCCCTTGACTTGTCATGG+TGG | + | chr4_3:23332859-23332878 | Msa0635140:intron | 50.0% |
CTCCCACCATGACAAGTCAA+GGG | - | chr4_3:23332865-23332884 | None:intergenic | 50.0% | |
TCTCCCACCATGACAAGTCA+AGG | - | chr4_3:23332866-23332885 | None:intergenic | 50.0% | |
! | GTCATGGTGGGAGACAACAT+TGG | + | chr4_3:23332872-23332891 | Msa0635140:intron | 50.0% |
TGACCGTGCCTAGTGACATA+CGG | + | chr4_3:23332965-23332984 | Msa0635140:intron | 50.0% | |
GTGCCTAGTGACATACGGAT+TGG | + | chr4_3:23332970-23332989 | Msa0635140:intron | 50.0% | |
CCACCAATCCGTATGTCACT+AGG | - | chr4_3:23332976-23332995 | None:intergenic | 50.0% | |
!! | CCTAGTGACATACGGATTGG+TGG | + | chr4_3:23332973-23332992 | Msa0635140:intron | 50.0% |
!! | CTAGTTCTGGGGATCTTGCA+AGG | + | chr4_3:23333174-23333193 | Msa0635140:CDS | 50.0% |
GTCCAAGCAGTCAATGCAGT+TGG | - | chr4_3:23333327-23333346 | None:intergenic | 50.0% | |
GCTGCTGCAATACTACTGTC+AGG | - | chr4_3:23333440-23333459 | None:intergenic | 50.0% | |
! | AGAGCAGGTTTTCCTTCCTG+TGG | - | chr4_3:23334139-23334158 | None:intergenic | 50.0% |
GAATCAAGCTCCCATAGAGC+AGG | - | chr4_3:23334154-23334173 | None:intergenic | 50.0% | |
AGGAGGACTCACAACTTCTC+AGG | - | chr4_3:23334220-23334239 | None:intergenic | 50.0% | |
ATAGGGAAATCTCCGCACGT+GGG | - | chr4_3:23334373-23334392 | None:intergenic | 50.0% | |
TATAGGGAAATCTCCGCACG+TGG | - | chr4_3:23334374-23334393 | None:intergenic | 50.0% | |
ATCTCTGCAAGCTGGTACAG+GGG | - | chr4_3:23334784-23334803 | None:intergenic | 50.0% | |
CATCTCTGCAAGCTGGTACA+GGG | - | chr4_3:23334785-23334804 | None:intergenic | 50.0% | |
TCATCTCTGCAAGCTGGTAC+AGG | - | chr4_3:23334786-23334805 | None:intergenic | 50.0% | |
! | GGTGGAGTTTCTGGAAACAG+TGG | + | chr4_3:23334906-23334925 | Msa0635140:CDS | 50.0% |
ACCTCAGCAAACGAGTCCAA+TGG | + | chr4_3:23336415-23336434 | Msa0635140:CDS | 50.0% | |
! | ACCATTGGACTCGTTTGCTG+AGG | - | chr4_3:23336419-23336438 | None:intergenic | 50.0% |
CAGCAAACGAGTCCAATGGT+TGG | + | chr4_3:23336419-23336438 | Msa0635140:CDS | 50.0% | |
CTACACCAAGATCCACACCA+CGG | - | chr4_3:23336575-23336594 | None:intergenic | 50.0% | |
!! | TTGGTGTAGTAATGACGGGC+AGG | + | chr4_3:23336586-23336605 | Msa0635140:intron | 50.0% |
!! | AGTAATGACGGGCAGGTTGA+AGG | + | chr4_3:23336593-23336612 | Msa0635140:intron | 50.0% |
TGTAGCCGACCCCATTTAGT+GGG | - | chr4_3:23336708-23336727 | None:intergenic | 50.0% | |
ATGTAGCCGACCCCATTTAG+TGG | - | chr4_3:23336709-23336728 | None:intergenic | 50.0% | |
ACTAAATGGGGTCGGCTACA+TGG | + | chr4_3:23336708-23336727 | Msa0635140:intron | 50.0% | |
!! | ACCAAGTTGGTGCTGACCTT+GGG | + | chr4_3:23337083-23337102 | Msa0635140:CDS | 50.0% |
!! | ATCCAAGTTGGTTGACGAGG+TGG | + | chr4_3:23337140-23337159 | Msa0635140:CDS | 50.0% |
AACCACCTCGTCAACCAACT+TGG | - | chr4_3:23337145-23337164 | None:intergenic | 50.0% | |
!! | TTGGGGACGAAAAAGTACCC+AGG | + | chr4_3:23337167-23337186 | Msa0635140:CDS | 50.0% |
GTTGAGACTTGTAGGTGGGG+TGG | - | chr4_3:23324994-23325013 | None:intergenic | 55.0% | |
GTCTCAACCACCAACCATGG+TGG | + | chr4_3:23325006-23325025 | Msa0635140:five_prime_UTR | 55.0% | |
AACGGTTGTGCCACCATGGT+TGG | - | chr4_3:23325019-23325038 | None:intergenic | 55.0% | |
AGAGAACGGTTGTGCCACCA+TGG | - | chr4_3:23325023-23325042 | None:intergenic | 55.0% | |
!!! | GGGATTTTGCGTCGGTGTTG+TGG | - | chr4_3:23325098-23325117 | None:intergenic | 55.0% |
!! | TTGCTTCAGCGGATTGCCGA+AGG | + | chr4_3:23325529-23325548 | Msa0635140:CDS | 55.0% |
GCCGAAGGTAATCGAGCTAC+CGG | + | chr4_3:23325544-23325563 | Msa0635140:CDS | 55.0% | |
GAAGGTAATCGAGCTACCGG+TGG | + | chr4_3:23325547-23325566 | Msa0635140:CDS | 55.0% | |
GCATGACTTCCGTTCCGAGT+TGG | - | chr4_3:23325824-23325843 | None:intergenic | 55.0% | |
CTTGCTCTCACCCTAGCACT+TGG | - | chr4_3:23328378-23328397 | None:intergenic | 55.0% | |
CAAGTGCTAGGGTGAGAGCA+AGG | + | chr4_3:23328376-23328395 | Msa0635140:intron | 55.0% | |
TGCTCAGAGTAGACCCTCAG+TGG | + | chr4_3:23328809-23328828 | Msa0635140:intron | 55.0% | |
GGGAGTGAATGATCGAGGGA+GGG | + | chr4_3:23330242-23330261 | Msa0635140:CDS | 55.0% | |
TGAAGAAGCTGGCTGCTGCA+AGG | + | chr4_3:23330302-23330321 | Msa0635140:CDS | 55.0% | |
GAAGAAGCTGGCTGCTGCAA+GGG | + | chr4_3:23330303-23330322 | Msa0635140:CDS | 55.0% | |
GGCCTCGAGAAATGATGCTG+AGG | + | chr4_3:23331729-23331748 | Msa0635140:CDS | 55.0% | |
CGCCTCAGCATCATTTCTCG+AGG | - | chr4_3:23331734-23331753 | None:intergenic | 55.0% | |
! | ACGGTTCTGTTTCTCCGCCT+TGG | + | chr4_3:23332308-23332327 | Msa0635140:intron | 55.0% |
GTATGTCACTAGGCACGGTC+AGG | - | chr4_3:23332966-23332985 | None:intergenic | 55.0% | |
TCTGGGGATCTTGCAAGGCT+TGG | + | chr4_3:23333179-23333198 | Msa0635140:CDS | 55.0% | |
GCTGGCGTCCTAAAGCTTGT+AGG | - | chr4_3:23333379-23333398 | None:intergenic | 55.0% | |
AGGACGCCAGCTTCATGCAA+TGG | + | chr4_3:23333388-23333407 | Msa0635140:CDS | 55.0% | |
GGACGCCAGCTTCATGCAAT+GGG | + | chr4_3:23333389-23333408 | Msa0635140:CDS | 55.0% | |
GATGCTCTTGCGCAGCAGTA+TGG | + | chr4_3:23333488-23333507 | Msa0635140:CDS | 55.0% | |
ACAGGTGTTTCCAGAGAGGC+AGG | + | chr4_3:23333646-23333665 | Msa0635140:intron | 55.0% | |
CAGGTGTTTCCAGAGAGGCA+GGG | + | chr4_3:23333647-23333666 | Msa0635140:intron | 55.0% | |
TTCCAGAGAGGCAGGGAAAG+TGG | + | chr4_3:23333654-23333673 | Msa0635140:CDS | 55.0% | |
TTCCACTTTCCCTGCCTCTC+TGG | - | chr4_3:23333659-23333678 | None:intergenic | 55.0% | |
TAGGGAAATCTCCGCACGTG+GGG | - | chr4_3:23334372-23334391 | None:intergenic | 55.0% | |
TGGCTTCTGATCAGGTTCGC+AGG | - | chr4_3:23334886-23334905 | None:intergenic | 55.0% | |
TGGGTTCCTCTACCTCTGCT+TGG | + | chr4_3:23335410-23335429 | Msa0635140:intron | 55.0% | |
ACACATGGTTGGCAGGGAAG+TGG | - | chr4_3:23335897-23335916 | None:intergenic | 55.0% | |
! | GAGTCCAATGGTTGGTACGG+AGG | + | chr4_3:23336427-23336446 | Msa0635140:CDS | 55.0% |
!! | AGCTGGTGTTGCAGCAGAGA+TGG | + | chr4_3:23337039-23337058 | Msa0635140:CDS | 55.0% |
!! | GACCAAGTTGGTGCTGACCT+TGG | + | chr4_3:23337082-23337101 | Msa0635140:CDS | 55.0% |
TCCCAAGGTCAGCACCAACT+TGG | - | chr4_3:23337087-23337106 | None:intergenic | 55.0% | |
GAGACTTGTAGGTGGGGTGG+AGG | - | chr4_3:23324991-23325010 | None:intergenic | 60.0% | |
GGTTGTGCCACCATGGTTGG+TGG | - | chr4_3:23325016-23325035 | None:intergenic | 60.0% | |
GGGGGAGGAAGAGAAGGTTG+TGG | - | chr4_3:23325059-23325078 | None:intergenic | 60.0% | |
GGGTTAGGGGGAGGAAGAGA+AGG | - | chr4_3:23325065-23325084 | None:intergenic | 60.0% | |
TGGTGGTTGGGAGGGGTTAG+GGG | - | chr4_3:23325078-23325097 | None:intergenic | 60.0% | |
GTGGTGGTTGGGAGGGGTTA+GGG | - | chr4_3:23325079-23325098 | None:intergenic | 60.0% | |
TGTGGTGGTTGGGAGGGGTT+AGG | - | chr4_3:23325080-23325099 | None:intergenic | 60.0% | |
! | GGTGTTGTGGTGGTTGGGAG+GGG | - | chr4_3:23325085-23325104 | None:intergenic | 60.0% |
!! | CGGTGTTGTGGTGGTTGGGA+GGG | - | chr4_3:23325086-23325105 | None:intergenic | 60.0% |
!! | TCGGTGTTGTGGTGGTTGGG+AGG | - | chr4_3:23325087-23325106 | None:intergenic | 60.0% |
!! | GCGTCGGTGTTGTGGTGGTT+GGG | - | chr4_3:23325090-23325109 | None:intergenic | 60.0% |
!! | TGCGTCGGTGTTGTGGTGGT+TGG | - | chr4_3:23325091-23325110 | None:intergenic | 60.0% |
GGGGAGTGAATGATCGAGGG+AGG | + | chr4_3:23330241-23330260 | Msa0635140:CDS | 60.0% | |
GCTCTTGCGCAGCAGTATGG+TGG | + | chr4_3:23333491-23333510 | Msa0635140:CDS | 60.0% | |
GGTGCCTCCGTACCAACCAT+TGG | - | chr4_3:23336434-23336453 | None:intergenic | 60.0% | |
GGTGGTTGGGAGGGGTTAGG+GGG | - | chr4_3:23325077-23325096 | None:intergenic | 65.0% | |
GCTTAGGTGGTCTGGCCACG+TGG | + | chr4_3:23326503-23326522 | Msa0635140:intron | 65.0% | |
!! | TGGTACGGAGGCACCCTCCT+TGG | + | chr4_3:23336439-23336458 | Msa0635140:CDS | 65.0% |
GGTTGGGAGGGGTTAGGGGG+AGG | - | chr4_3:23325074-23325093 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 23324906 | 23337531 | 23324906 | ID=Msa0635140;Name=Msa0635140 |
chr4_3 | mRNA | 23324906 | 23337531 | 23324906 | ID=Msa0635140-mRNA-1;Parent=Msa0635140;Name=Msa0635140-mRNA-1;_AED=0.10;_eAED=0.10;_QI=260|1|1|1|1|1|16|336|914 |
chr4_3 | exon | 23324906 | 23325315 | 23324906 | ID=Msa0635140-mRNA-1:exon:6011;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23325400 | 23325604 | 23325400 | ID=Msa0635140-mRNA-1:exon:6012;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23327265 | 23327430 | 23327265 | ID=Msa0635140-mRNA-1:exon:6013;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23327525 | 23327747 | 23327525 | ID=Msa0635140-mRNA-1:exon:6014;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23329864 | 23329940 | 23329864 | ID=Msa0635140-mRNA-1:exon:6015;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23330230 | 23330417 | 23330230 | ID=Msa0635140-mRNA-1:exon:6016;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23330522 | 23330619 | 23330522 | ID=Msa0635140-mRNA-1:exon:6017;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23331716 | 23331849 | 23331716 | ID=Msa0635140-mRNA-1:exon:6018;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23331961 | 23332092 | 23331961 | ID=Msa0635140-mRNA-1:exon:6019;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23333148 | 23333532 | 23333148 | ID=Msa0635140-mRNA-1:exon:6020;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23333650 | 23333771 | 23333650 | ID=Msa0635140-mRNA-1:exon:6021;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23334117 | 23334227 | 23334117 | ID=Msa0635140-mRNA-1:exon:6022;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23334734 | 23334946 | 23334734 | ID=Msa0635140-mRNA-1:exon:6023;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23336036 | 23336215 | 23336036 | ID=Msa0635140-mRNA-1:exon:6024;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23336402 | 23336513 | 23336402 | ID=Msa0635140-mRNA-1:exon:6025;Parent=Msa0635140-mRNA-1 |
chr4_3 | exon | 23336947 | 23337531 | 23336947 | ID=Msa0635140-mRNA-1:exon:6026;Parent=Msa0635140-mRNA-1 |
chr4_3 | five_prime_UTR | 23324906 | 23325165 | 23324906 | ID=Msa0635140-mRNA-1:five_prime_utr;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23325166 | 23325315 | 23325166 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23325400 | 23325604 | 23325400 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23327265 | 23327430 | 23327265 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23327525 | 23327747 | 23327525 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23329864 | 23329940 | 23329864 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23330230 | 23330417 | 23330230 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23330522 | 23330619 | 23330522 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23331716 | 23331849 | 23331716 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23331961 | 23332092 | 23331961 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23333148 | 23333532 | 23333148 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23333650 | 23333771 | 23333650 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23334117 | 23334227 | 23334117 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23334734 | 23334946 | 23334734 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23336036 | 23336215 | 23336036 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23336402 | 23336513 | 23336402 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | CDS | 23336947 | 23337195 | 23336947 | ID=Msa0635140-mRNA-1:cds;Parent=Msa0635140-mRNA-1 |
chr4_3 | three_prime_UTR | 23337196 | 23337531 | 23337196 | ID=Msa0635140-mRNA-1:three_prime_utr;Parent=Msa0635140-mRNA-1 |
Gene Sequence |
Protein sequence |