Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0640600 | XP_003605955.1 | 93.583 | 935 | 19 | 5 | 1 | 894 | 1 | 935 | 0.0 | 1782 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0640600 | sp|P79051|RHP16_SCHPO | 42.468 | 697 | 294 | 13 | 208 | 892 | 258 | 859 | 4.84e-172 | 524 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0640600 | TR | SNF2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0631380 | Msa0640600 | 0.803288 | 3.744863e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0640600 | MtrunA17_Chr4g0024921 | 93.583 | 935 | 19 | 5 | 1 | 894 | 1 | 935 | 0.0 | 1782 |
Msa0640600 | MtrunA17_Chr2g0320751 | 31.320 | 712 | 356 | 20 | 223 | 892 | 395 | 1015 | 6.47e-94 | 318 |
Msa0640600 | MtrunA17_Chr1g0212331 | 30.893 | 806 | 378 | 25 | 208 | 893 | 293 | 1039 | 1.59e-91 | 312 |
Msa0640600 | MtrunA17_Chr2g0281601 | 30.189 | 848 | 395 | 28 | 177 | 893 | 521 | 1302 | 8.75e-87 | 302 |
Msa0640600 | MtrunA17_Chr7g0255821 | 29.622 | 503 | 280 | 13 | 414 | 892 | 368 | 820 | 7.05e-60 | 219 |
Msa0640600 | MtrunA17_Chr7g0255821 | 33.058 | 121 | 74 | 2 | 225 | 342 | 249 | 365 | 4.78e-14 | 76.6 |
Msa0640600 | MtrunA17_Chr1g0168031 | 38.824 | 255 | 136 | 7 | 640 | 892 | 916 | 1152 | 6.17e-46 | 179 |
Msa0640600 | MtrunA17_Chr1g0168031 | 34.862 | 218 | 103 | 5 | 405 | 618 | 656 | 838 | 3.03e-32 | 135 |
Msa0640600 | MtrunA17_Chr1g0168031 | 28.244 | 262 | 144 | 9 | 90 | 334 | 418 | 652 | 2.14e-12 | 71.2 |
Msa0640600 | MtrunA17_Chr5g0403921 | 41.176 | 119 | 69 | 1 | 743 | 860 | 524 | 642 | 2.47e-23 | 106 |
Msa0640600 | MtrunA17_Chr1g0175191 | 36.667 | 150 | 90 | 2 | 743 | 888 | 1080 | 1228 | 1.59e-22 | 104 |
Msa0640600 | MtrunA17_Chr1g0163011 | 35.417 | 144 | 91 | 1 | 722 | 865 | 569 | 710 | 5.90e-21 | 98.6 |
Msa0640600 | MtrunA17_Chr2g0286291 | 40.769 | 130 | 74 | 2 | 737 | 865 | 506 | 633 | 2.77e-20 | 97.1 |
Msa0640600 | MtrunA17_Chr4g0066741 | 39.394 | 132 | 77 | 2 | 735 | 865 | 501 | 630 | 6.55e-20 | 95.9 |
Msa0640600 | MtrunA17_Chr5g0428401 | 26.623 | 308 | 170 | 11 | 638 | 892 | 1349 | 1653 | 1.50e-19 | 94.7 |
Msa0640600 | MtrunA17_Chr4g0017211 | 31.013 | 158 | 106 | 1 | 740 | 894 | 1827 | 1984 | 1.52e-19 | 95.1 |
Msa0640600 | MtrunA17_Chr7g0257101 | 32.867 | 143 | 91 | 1 | 738 | 875 | 1205 | 1347 | 2.57e-19 | 94.0 |
Msa0640600 | MtrunA17_Chr5g0394201 | 38.462 | 130 | 77 | 2 | 738 | 865 | 685 | 813 | 6.10e-19 | 92.8 |
Msa0640600 | MtrunA17_Chr4g0052341 | 32.121 | 165 | 105 | 4 | 719 | 878 | 1056 | 1218 | 4.20e-18 | 90.1 |
Msa0640600 | MtrunA17_Chr1g0205891 | 36.154 | 130 | 80 | 2 | 738 | 865 | 699 | 827 | 1.13e-17 | 88.6 |
Msa0640600 | MtrunA17_Chr8g0384531 | 32.667 | 150 | 100 | 1 | 743 | 892 | 758 | 906 | 1.47e-17 | 88.2 |
Msa0640600 | MtrunA17_Chr5g0442141 | 35.333 | 150 | 91 | 3 | 743 | 889 | 951 | 1097 | 4.42e-17 | 87.0 |
Msa0640600 | MtrunA17_Chr8g0348721 | 34.416 | 154 | 96 | 3 | 730 | 882 | 1319 | 1468 | 7.33e-17 | 86.3 |
Msa0640600 | MtrunA17_Chr7g0232121 | 30.366 | 191 | 114 | 3 | 720 | 893 | 362 | 550 | 8.92e-17 | 85.5 |
Msa0640600 | MtrunA17_Chr3g0095091 | 35.333 | 150 | 91 | 3 | 743 | 889 | 905 | 1051 | 1.20e-16 | 85.5 |
Msa0640600 | MtrunA17_Chr4g0040301 | 32.353 | 136 | 92 | 0 | 743 | 878 | 398 | 533 | 1.63e-16 | 84.3 |
Msa0640600 | MtrunA17_Chr7g0231521 | 29.843 | 191 | 115 | 3 | 720 | 893 | 283 | 471 | 2.41e-16 | 84.0 |
Msa0640600 | MtrunA17_Chr4g0066651 | 38.400 | 125 | 74 | 2 | 743 | 865 | 1326 | 1449 | 7.88e-16 | 82.8 |
Msa0640600 | MtrunA17_Chr5g0393461 | 33.108 | 148 | 97 | 2 | 720 | 866 | 535 | 681 | 3.20e-15 | 80.5 |
Msa0640600 | MtrunA17_Chr7g0248031 | 32.468 | 154 | 99 | 3 | 730 | 882 | 1327 | 1476 | 6.00e-15 | 80.1 |
Msa0640600 | MtrunA17_Chr3g0137091 | 31.544 | 149 | 99 | 3 | 733 | 879 | 618 | 765 | 7.26e-15 | 79.7 |
Msa0640600 | MtrunA17_Chr4g0069451 | 28.571 | 154 | 106 | 2 | 705 | 858 | 454 | 603 | 8.19e-15 | 79.0 |
Msa0640600 | MtrunA17_Chr1g0183681 | 30.833 | 120 | 83 | 0 | 743 | 862 | 753 | 872 | 7.94e-14 | 76.3 |
Msa0640600 | MtrunA17_Chr3g0083491 | 30.252 | 119 | 81 | 2 | 743 | 861 | 1171 | 1287 | 1.31e-12 | 72.0 |
Msa0640600 | MtrunA17_Chr7g0233001 | 32.911 | 158 | 94 | 4 | 743 | 889 | 339 | 495 | 1.49e-12 | 71.2 |
Msa0640600 | MtrunA17_Chr2g0320781 | 32.911 | 158 | 94 | 5 | 709 | 856 | 75 | 230 | 5.21e-12 | 67.0 |
Msa0640600 | MtrunA17_Chr7g0225791 | 36.232 | 138 | 76 | 4 | 743 | 869 | 1104 | 1240 | 7.99e-12 | 69.7 |
Msa0640600 | MtrunA17_Chr1g0190381 | 33.099 | 142 | 81 | 2 | 739 | 866 | 202 | 343 | 8.45e-12 | 68.9 |
Msa0640600 | MtrunA17_Chr3g0086111 | 26.744 | 172 | 123 | 1 | 723 | 891 | 529 | 700 | 9.70e-12 | 69.3 |
Msa0640600 | MtrunA17_Chr4g0047081 | 35.036 | 137 | 79 | 3 | 743 | 869 | 1054 | 1190 | 1.29e-11 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0640600 | AT1G05120.1 | 64.975 | 788 | 219 | 13 | 147 | 894 | 63 | 833 | 0.0 | 1019 |
Msa0640600 | AT1G05120.2 | 64.975 | 788 | 219 | 13 | 147 | 894 | 106 | 876 | 0.0 | 1019 |
Msa0640600 | AT1G02670.6 | 58.300 | 494 | 155 | 5 | 402 | 892 | 217 | 662 | 0.0 | 572 |
Msa0640600 | AT1G02670.6 | 49.673 | 153 | 51 | 3 | 195 | 335 | 77 | 215 | 4.78e-32 | 134 |
Msa0640600 | AT1G02670.3 | 58.300 | 494 | 155 | 5 | 402 | 892 | 244 | 689 | 0.0 | 571 |
Msa0640600 | AT1G02670.3 | 49.673 | 153 | 51 | 3 | 195 | 335 | 104 | 242 | 5.61e-32 | 134 |
Msa0640600 | AT1G02670.5 | 58.520 | 446 | 135 | 4 | 402 | 845 | 217 | 614 | 4.19e-176 | 523 |
Msa0640600 | AT1G02670.5 | 49.673 | 153 | 51 | 3 | 195 | 335 | 77 | 215 | 4.34e-32 | 133 |
Msa0640600 | AT1G02670.2 | 58.520 | 446 | 135 | 4 | 402 | 845 | 244 | 641 | 1.46e-175 | 523 |
Msa0640600 | AT1G02670.2 | 49.673 | 153 | 51 | 3 | 195 | 335 | 104 | 242 | 4.77e-32 | 133 |
Msa0640600 | AT1G02670.1 | 51.012 | 494 | 168 | 7 | 402 | 892 | 255 | 677 | 5.05e-149 | 456 |
Msa0640600 | AT1G02670.1 | 49.673 | 153 | 51 | 3 | 195 | 335 | 115 | 253 | 5.26e-32 | 134 |
Msa0640600 | AT1G02670.7 | 51.012 | 494 | 168 | 7 | 402 | 892 | 244 | 666 | 8.32e-149 | 454 |
Msa0640600 | AT1G02670.7 | 49.673 | 153 | 51 | 3 | 195 | 335 | 104 | 242 | 4.48e-32 | 134 |
Msa0640600 | AT1G61140.3 | 31.527 | 812 | 396 | 21 | 181 | 893 | 369 | 1119 | 1.69e-99 | 336 |
Msa0640600 | AT1G61140.1 | 31.527 | 812 | 396 | 21 | 181 | 893 | 527 | 1277 | 6.69e-99 | 337 |
Msa0640600 | AT1G02670.4 | 50.760 | 329 | 112 | 4 | 402 | 728 | 244 | 524 | 6.95e-99 | 319 |
Msa0640600 | AT1G02670.4 | 49.673 | 153 | 51 | 3 | 195 | 335 | 104 | 242 | 1.22e-32 | 134 |
Msa0640600 | AT1G50410.2 | 30.108 | 837 | 408 | 23 | 181 | 893 | 197 | 980 | 3.28e-97 | 327 |
Msa0640600 | AT1G50410.1 | 30.108 | 837 | 408 | 23 | 181 | 893 | 197 | 980 | 3.28e-97 | 327 |
Msa0640600 | AT1G50410.3 | 30.108 | 837 | 408 | 23 | 181 | 893 | 197 | 980 | 3.28e-97 | 327 |
Msa0640600 | AT3G20010.3 | 30.488 | 820 | 379 | 22 | 208 | 893 | 18 | 780 | 4.08e-94 | 314 |
Msa0640600 | AT3G20010.2 | 30.500 | 800 | 367 | 21 | 226 | 893 | 13 | 755 | 2.33e-92 | 308 |
Msa0640600 | AT5G22750.1 | 31.862 | 725 | 332 | 22 | 223 | 892 | 411 | 1028 | 5.86e-91 | 311 |
Msa0640600 | AT1G11100.3 | 30.633 | 790 | 379 | 26 | 208 | 893 | 402 | 1126 | 3.20e-89 | 307 |
Msa0640600 | AT1G11100.2 | 30.253 | 790 | 382 | 24 | 208 | 893 | 544 | 1268 | 6.61e-89 | 308 |
Msa0640600 | AT1G11100.4 | 30.253 | 790 | 382 | 24 | 208 | 893 | 545 | 1269 | 7.49e-89 | 308 |
Msa0640600 | AT3G20010.1 | 32.221 | 689 | 339 | 18 | 276 | 893 | 415 | 1046 | 1.64e-87 | 301 |
Msa0640600 | AT3G20010.5 | 32.221 | 689 | 339 | 18 | 276 | 893 | 415 | 1046 | 1.64e-87 | 301 |
Msa0640600 | AT3G20010.7 | 32.221 | 689 | 339 | 18 | 276 | 893 | 415 | 1046 | 1.64e-87 | 301 |
Msa0640600 | AT5G43530.1 | 33.977 | 518 | 260 | 8 | 407 | 892 | 809 | 1276 | 4.66e-84 | 295 |
Msa0640600 | AT5G43530.1 | 34.127 | 126 | 70 | 3 | 223 | 335 | 679 | 804 | 1.34e-12 | 72.4 |
Msa0640600 | AT1G11100.5 | 29.225 | 787 | 350 | 26 | 208 | 893 | 402 | 1082 | 6.21e-80 | 281 |
Msa0640600 | AT1G11100.1 | 28.372 | 786 | 358 | 24 | 208 | 893 | 545 | 1225 | 6.49e-77 | 273 |
Msa0640600 | AT3G16600.1 | 29.812 | 691 | 303 | 26 | 208 | 874 | 56 | 588 | 1.49e-65 | 232 |
Msa0640600 | AT1G50410.4 | 26.954 | 742 | 351 | 21 | 181 | 792 | 197 | 877 | 1.40e-59 | 219 |
Msa0640600 | AT5G05130.1 | 30.435 | 483 | 271 | 11 | 401 | 866 | 418 | 852 | 8.71e-59 | 217 |
Msa0640600 | AT3G20010.4 | 28.718 | 585 | 293 | 16 | 276 | 792 | 415 | 943 | 3.23e-50 | 192 |
Msa0640600 | AT3G20010.6 | 28.718 | 585 | 293 | 16 | 276 | 792 | 415 | 943 | 3.23e-50 | 192 |
Msa0640600 | AT3G20010.8 | 28.718 | 585 | 293 | 16 | 276 | 792 | 415 | 943 | 3.23e-50 | 192 |
Msa0640600 | AT1G61140.2 | 31.020 | 490 | 227 | 12 | 181 | 617 | 534 | 965 | 2.99e-47 | 183 |
Msa0640600 | AT2G02090.1 | 25.227 | 662 | 321 | 24 | 226 | 873 | 234 | 735 | 2.44e-33 | 138 |
Msa0640600 | AT5G66750.1 | 42.857 | 119 | 67 | 1 | 743 | 860 | 542 | 660 | 5.00e-24 | 108 |
Msa0640600 | AT2G40770.2 | 27.338 | 278 | 178 | 7 | 638 | 894 | 1341 | 1615 | 8.60e-24 | 108 |
Msa0640600 | AT2G40770.1 | 27.338 | 278 | 178 | 7 | 638 | 894 | 1341 | 1615 | 8.60e-24 | 108 |
Msa0640600 | AT2G40770.3 | 27.338 | 278 | 178 | 7 | 638 | 894 | 1341 | 1615 | 8.60e-24 | 108 |
Msa0640600 | AT3G12810.1 | 37.984 | 129 | 80 | 0 | 740 | 868 | 1090 | 1218 | 6.28e-23 | 106 |
Msa0640600 | AT3G12810.2 | 37.984 | 129 | 80 | 0 | 740 | 868 | 1086 | 1214 | 6.38e-23 | 106 |
Msa0640600 | AT3G57300.1 | 31.847 | 157 | 106 | 1 | 738 | 893 | 1219 | 1375 | 7.59e-20 | 96.3 |
Msa0640600 | AT3G57300.4 | 31.847 | 157 | 106 | 1 | 738 | 893 | 1219 | 1375 | 7.59e-20 | 96.3 |
Msa0640600 | AT3G57300.2 | 31.847 | 157 | 106 | 1 | 738 | 893 | 1252 | 1408 | 8.19e-20 | 96.3 |
Msa0640600 | AT3G06400.2 | 39.231 | 130 | 76 | 2 | 737 | 865 | 504 | 631 | 1.08e-19 | 95.5 |
Msa0640600 | AT3G06400.3 | 39.231 | 130 | 76 | 2 | 737 | 865 | 504 | 631 | 1.10e-19 | 95.5 |
Msa0640600 | AT3G06400.1 | 39.231 | 130 | 76 | 2 | 737 | 865 | 504 | 631 | 1.11e-19 | 95.5 |
Msa0640600 | AT5G18620.2 | 38.400 | 125 | 76 | 1 | 742 | 865 | 512 | 636 | 1.23e-19 | 95.5 |
Msa0640600 | AT5G18620.1 | 38.400 | 125 | 76 | 1 | 742 | 865 | 512 | 636 | 1.24e-19 | 95.5 |
Msa0640600 | AT2G44980.1 | 35.000 | 160 | 101 | 2 | 720 | 878 | 365 | 522 | 6.91e-19 | 92.8 |
Msa0640600 | AT3G54280.1 | 29.747 | 158 | 108 | 1 | 740 | 894 | 1829 | 1986 | 7.92e-19 | 93.2 |
Msa0640600 | AT5G63950.2 | 33.333 | 150 | 99 | 1 | 743 | 892 | 733 | 881 | 8.62e-19 | 92.4 |
Msa0640600 | AT3G54280.2 | 29.747 | 158 | 108 | 1 | 740 | 894 | 1860 | 2017 | 9.16e-19 | 92.8 |
Msa0640600 | AT5G63950.1 | 33.333 | 150 | 99 | 1 | 743 | 892 | 750 | 898 | 1.01e-18 | 92.4 |
Msa0640600 | AT2G44980.3 | 32.941 | 170 | 101 | 2 | 720 | 878 | 373 | 540 | 9.59e-18 | 89.0 |
Msa0640600 | AT2G44980.2 | 32.941 | 170 | 101 | 2 | 720 | 878 | 374 | 541 | 1.00e-17 | 89.0 |
Msa0640600 | AT5G19310.2 | 37.600 | 125 | 75 | 2 | 743 | 865 | 449 | 572 | 2.05e-17 | 87.8 |
Msa0640600 | AT1G03750.1 | 34.307 | 137 | 90 | 0 | 743 | 879 | 546 | 682 | 2.10e-17 | 87.8 |
Msa0640600 | AT5G44800.1 | 36.719 | 128 | 79 | 2 | 743 | 868 | 1022 | 1149 | 2.18e-17 | 88.6 |
Msa0640600 | AT5G19310.1 | 37.600 | 125 | 75 | 2 | 743 | 865 | 713 | 836 | 2.28e-17 | 87.8 |
Msa0640600 | AT3G06010.1 | 35.385 | 130 | 81 | 2 | 738 | 865 | 726 | 854 | 4.96e-17 | 87.0 |
Msa0640600 | AT2G13370.1 | 34.899 | 149 | 91 | 3 | 738 | 883 | 952 | 1097 | 6.80e-17 | 86.7 |
Msa0640600 | AT2G13370.2 | 34.899 | 149 | 91 | 3 | 738 | 883 | 952 | 1097 | 6.80e-17 | 86.7 |
Msa0640600 | AT2G13370.3 | 34.899 | 149 | 91 | 3 | 738 | 883 | 952 | 1097 | 6.80e-17 | 86.7 |
Msa0640600 | AT3G54460.2 | 32.258 | 124 | 83 | 1 | 743 | 866 | 898 | 1020 | 1.44e-16 | 85.5 |
Msa0640600 | AT3G54460.1 | 32.258 | 124 | 83 | 1 | 743 | 866 | 1195 | 1317 | 1.79e-16 | 85.1 |
Msa0640600 | AT3G19210.2 | 32.716 | 162 | 104 | 2 | 736 | 892 | 544 | 705 | 4.87e-16 | 83.6 |
Msa0640600 | AT3G19210.1 | 32.716 | 162 | 104 | 2 | 736 | 892 | 546 | 707 | 4.96e-16 | 83.6 |
Msa0640600 | AT3G19210.3 | 32.716 | 162 | 104 | 2 | 736 | 892 | 546 | 707 | 5.48e-16 | 83.2 |
Msa0640600 | AT2G28290.2 | 37.903 | 124 | 76 | 1 | 743 | 865 | 1091 | 1214 | 8.02e-16 | 83.2 |
Msa0640600 | AT2G28290.5 | 37.903 | 124 | 76 | 1 | 743 | 865 | 1092 | 1215 | 8.03e-16 | 83.2 |
Msa0640600 | AT2G28290.3 | 37.903 | 124 | 76 | 1 | 743 | 865 | 1091 | 1214 | 8.23e-16 | 83.2 |
Msa0640600 | AT2G28290.4 | 37.903 | 124 | 76 | 1 | 743 | 865 | 1091 | 1214 | 8.23e-16 | 83.2 |
Msa0640600 | AT2G28290.6 | 37.903 | 124 | 76 | 1 | 743 | 865 | 1092 | 1215 | 8.23e-16 | 83.2 |
Msa0640600 | AT2G28290.1 | 37.903 | 124 | 76 | 1 | 743 | 865 | 1091 | 1214 | 8.23e-16 | 83.2 |
Msa0640600 | AT2G46020.2 | 33.766 | 154 | 97 | 3 | 730 | 882 | 1314 | 1463 | 9.25e-16 | 83.2 |
Msa0640600 | AT2G46020.3 | 33.766 | 154 | 97 | 3 | 730 | 882 | 1314 | 1463 | 9.25e-16 | 83.2 |
Msa0640600 | AT2G46020.4 | 33.766 | 154 | 97 | 3 | 730 | 882 | 1314 | 1463 | 9.25e-16 | 83.2 |
Msa0640600 | AT2G46020.5 | 33.766 | 154 | 97 | 3 | 730 | 882 | 1313 | 1462 | 9.49e-16 | 83.2 |
Msa0640600 | AT2G46020.1 | 33.766 | 154 | 97 | 3 | 730 | 882 | 1313 | 1462 | 9.49e-16 | 83.2 |
Msa0640600 | AT2G46020.6 | 33.766 | 154 | 97 | 3 | 730 | 882 | 1313 | 1462 | 9.49e-16 | 83.2 |
Msa0640600 | AT2G18760.3 | 31.034 | 145 | 98 | 1 | 718 | 862 | 781 | 923 | 1.80e-15 | 82.0 |
Msa0640600 | AT2G18760.4 | 31.034 | 145 | 98 | 1 | 718 | 862 | 722 | 864 | 1.84e-15 | 82.0 |
Msa0640600 | AT2G18760.1 | 31.034 | 145 | 98 | 1 | 718 | 862 | 722 | 864 | 1.84e-15 | 82.0 |
Msa0640600 | AT2G18760.2 | 31.034 | 145 | 98 | 1 | 718 | 862 | 722 | 864 | 1.84e-15 | 82.0 |
Msa0640600 | AT2G18760.7 | 31.034 | 145 | 98 | 1 | 718 | 862 | 722 | 864 | 1.84e-15 | 82.0 |
Msa0640600 | AT2G18760.5 | 31.034 | 145 | 98 | 1 | 718 | 862 | 722 | 864 | 1.84e-15 | 82.0 |
Msa0640600 | AT2G18760.6 | 31.034 | 145 | 98 | 1 | 718 | 862 | 722 | 864 | 1.84e-15 | 82.0 |
Msa0640600 | AT1G48310.1 | 26.984 | 189 | 134 | 2 | 692 | 880 | 439 | 623 | 1.31e-14 | 78.6 |
Msa0640600 | AT2G25170.1 | 32.414 | 145 | 95 | 3 | 733 | 875 | 602 | 745 | 1.33e-14 | 79.0 |
Msa0640600 | AT2G25170.4 | 32.414 | 145 | 95 | 3 | 733 | 875 | 602 | 745 | 1.33e-14 | 79.0 |
Msa0640600 | AT1G48310.2 | 26.984 | 189 | 134 | 2 | 692 | 880 | 444 | 628 | 1.47e-14 | 78.6 |
Msa0640600 | AT2G25170.2 | 32.414 | 145 | 95 | 3 | 733 | 875 | 619 | 762 | 1.54e-14 | 79.0 |
Msa0640600 | AT2G25170.3 | 32.414 | 145 | 95 | 3 | 733 | 875 | 628 | 771 | 1.68e-14 | 79.0 |
Msa0640600 | AT1G48310.3 | 28.571 | 161 | 111 | 2 | 705 | 865 | 452 | 608 | 1.89e-14 | 78.2 |
Msa0640600 | AT4G31900.3 | 28.472 | 144 | 101 | 2 | 733 | 874 | 531 | 674 | 8.30e-14 | 76.6 |
Msa0640600 | AT4G31900.1 | 28.472 | 144 | 101 | 2 | 733 | 874 | 531 | 674 | 8.39e-14 | 76.6 |
Msa0640600 | AT4G31900.2 | 28.472 | 144 | 101 | 2 | 733 | 874 | 490 | 633 | 1.05e-13 | 76.3 |
Msa0640600 | AT1G08600.4 | 34.507 | 142 | 79 | 2 | 739 | 866 | 1129 | 1270 | 1.90e-12 | 72.0 |
Msa0640600 | AT1G08600.3 | 34.507 | 142 | 79 | 2 | 739 | 866 | 1129 | 1270 | 1.90e-12 | 72.0 |
Msa0640600 | AT1G08600.2 | 34.507 | 142 | 79 | 2 | 739 | 866 | 1129 | 1270 | 1.90e-12 | 72.0 |
Msa0640600 | AT1G08600.1 | 34.507 | 142 | 79 | 2 | 739 | 866 | 1108 | 1249 | 2.08e-12 | 72.0 |
Msa0640600 | AT1G05490.1 | 36.975 | 119 | 69 | 2 | 743 | 855 | 1217 | 1335 | 3.46e-11 | 68.2 |
Find 229 sgRNAs with CRISPR-Local
Find 538 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATTTACTACCTCTCTTTC+TGG | 0.110785 | 4_3:-39723304 | None:intergenic |
AGAGAGAGAAAGTGATAATT+AGG | 0.136697 | 4_3:-39721785 | None:intergenic |
GAGAGAAGAAATTAGATTTA+TGG | 0.174362 | 4_3:+39728324 | Msa0640600:intron |
TGATAAAACAACAACAATTA+AGG | 0.177264 | 4_3:+39727832 | Msa0640600:CDS |
ATCATCAGTAAATTTCTTAA+TGG | 0.256211 | 4_3:-39728561 | None:intergenic |
TAGCCAGTTCACATCATTCT+TGG | 0.257616 | 4_3:+39728381 | Msa0640600:CDS |
TCAGCACTCTTCCATCTCTT+TGG | 0.267531 | 4_3:-39723969 | None:intergenic |
ACAGTCCTTGCACAGGTTAT+AGG | 0.302494 | 4_3:-39725005 | None:intergenic |
GAGAGAGAAAGTGATAATTA+GGG | 0.303768 | 4_3:-39721784 | None:intergenic |
GAAATAATCTTCCACAATAT+TGG | 0.305287 | 4_3:-39724082 | None:intergenic |
GTTACTTAAGCTGGCCTGAT+AGG | 0.306168 | 4_3:+39729801 | Msa0640600:exon |
TGTTAACTAAAATGAAATAA+TGG | 0.312973 | 4_3:+39730027 | Msa0640600:three_prime_UTR |
CCAACTGCAGCAGCACTAAA+AGG | 0.314994 | 4_3:+39727482 | Msa0640600:CDS |
TGTTGGAGAGCTATATTCTT+TGG | 0.317103 | 4_3:+39724796 | Msa0640600:CDS |
TTCTTCGTTCGCTTCGTCAA+TGG | 0.318403 | 4_3:+39721810 | Msa0640600:exon |
ACAGGGCTTTATCAAGAAAA+AGG | 0.322711 | 4_3:+39724232 | Msa0640600:CDS |
GAAAGGTAGCACGAAGGTTC+TGG | 0.327375 | 4_3:+39723935 | Msa0640600:CDS |
CGCATTTATAGGCGTCGTTA+TGG | 0.331440 | 4_3:-39721658 | None:intergenic |
CTTGCACAGGTTATAGGAAT+AGG | 0.339208 | 4_3:-39724999 | None:intergenic |
CCAATTCAATCATCCGGATA+TGG | 0.350323 | 4_3:+39725707 | Msa0640600:CDS |
AGCTGGCCTGATAGGGTAAC+TGG | 0.351704 | 4_3:+39729809 | Msa0640600:exon |
TGCCCTTGTCCTTGCTAAAC+GGG | 0.353806 | 4_3:+39723767 | Msa0640600:CDS |
TGCCATAACAACACTGGTTT+AGG | 0.358363 | 4_3:-39723513 | None:intergenic |
TTCATTGAGGAGGGATAGCC+TGG | 0.360612 | 4_3:+39725930 | Msa0640600:CDS |
TTTCTCTTTGTTACTTAAGC+TGG | 0.361121 | 4_3:+39729792 | Msa0640600:exon |
TTAGCTGTAAGTAGATATAT+TGG | 0.366884 | 4_3:+39729943 | Msa0640600:three_prime_UTR |
GTCTTTCTCCGTTTAGATGA+AGG | 0.368755 | 4_3:-39723276 | None:intergenic |
CCTTAGAGTCTTTCTACAAA+TGG | 0.370131 | 4_3:+39724744 | Msa0640600:CDS |
GGATGAATTAGCGGCTGATA+AGG | 0.375599 | 4_3:+39722706 | Msa0640600:intron |
GCAGTTTGAACATACTTTAG+AGG | 0.379174 | 4_3:-39725510 | None:intergenic |
GCGGGAAGAGACGCATTTAT+AGG | 0.382583 | 4_3:-39721669 | None:intergenic |
CAGGTCTGTAGATTCTATCT+TGG | 0.382698 | 4_3:-39723325 | None:intergenic |
GATAAAACAACAACAATTAA+GGG | 0.383339 | 4_3:+39727833 | Msa0640600:CDS |
GATGAATTAGCGGCTGATAA+GGG | 0.383814 | 4_3:+39722707 | Msa0640600:intron |
GTCTTAAGGCGAACTAAAAT+AGG | 0.384212 | 4_3:+39725785 | Msa0640600:CDS |
TTGCCCTTGTCCTTGCTAAA+CGG | 0.387044 | 4_3:+39723766 | Msa0640600:CDS |
ATAGATTTCTCTGCTTCCTT+AGG | 0.389371 | 4_3:+39727740 | Msa0640600:CDS |
ATCCTAAACCAGTGTTGTTA+TGG | 0.390596 | 4_3:+39723511 | Msa0640600:CDS |
GAACCCTGCTGTGGAGCGTC+AGG | 0.399177 | 4_3:+39729394 | Msa0640600:CDS |
GAATCACTGATGATTATAGT+AGG | 0.405472 | 4_3:-39723210 | None:intergenic |
CGTTAACTGCTCATAGATAC+TGG | 0.406151 | 4_3:-39729912 | None:intergenic |
GCTTCCGATGAAATCGATTC+TGG | 0.406863 | 4_3:+39721856 | Msa0640600:CDS |
CCGTGGTTGCTGTCACTCAA+TGG | 0.407106 | 4_3:+39723886 | Msa0640600:CDS |
ACAGCGAAGTGATGTATGTT+AGG | 0.407388 | 4_3:+39730121 | Msa0640600:three_prime_UTR |
AATTTAGTGTTATACCTGAT+TGG | 0.408661 | 4_3:-39729452 | None:intergenic |
CTTAGAGTCTTTCTACAAAT+GGG | 0.409079 | 4_3:+39724745 | Msa0640600:CDS |
AATTAGATTTATGGTTGAAA+GGG | 0.410682 | 4_3:+39728333 | Msa0640600:CDS |
GGAGAATACACTACAAGATA+TGG | 0.417545 | 4_3:-39727461 | None:intergenic |
CCATATCCGGATGATTGAAT+TGG | 0.418058 | 4_3:-39725707 | None:intergenic |
TTTCCCATCATCACCATATC+CGG | 0.419503 | 4_3:-39725720 | None:intergenic |
TGGAATCCTTGCTGATGAAA+TGG | 0.420074 | 4_3:+39723719 | Msa0640600:CDS |
TGAGCCTGACGCTCCACAGC+AGG | 0.425918 | 4_3:-39729398 | None:intergenic |
CCATTTGTAGAAAGACTCTA+AGG | 0.426209 | 4_3:-39724744 | None:intergenic |
AGGTGTATCTTGCGTTCAAT+TGG | 0.435373 | 4_3:+39728505 | Msa0640600:CDS |
AAACAAGAACTCACGATCCT+AGG | 0.437052 | 4_3:-39725833 | None:intergenic |
CAAGTAAATTTACCTTCTGC+AGG | 0.439021 | 4_3:-39728420 | None:intergenic |
ACGAAGGTTCTGGTTTATCA+TGG | 0.439843 | 4_3:+39723945 | Msa0640600:CDS |
CTGATTCATCTGACTTTAGC+GGG | 0.441027 | 4_3:+39723253 | Msa0640600:CDS |
GAGATGGGATGAGACGAAAA+TGG | 0.443018 | 4_3:-39721737 | None:intergenic |
AACATATTCTACTGTGGAAT+CGG | 0.445190 | 4_3:+39724022 | Msa0640600:CDS |
CGTGGTTGCTGTCACTCAAT+GGG | 0.456424 | 4_3:+39723887 | Msa0640600:CDS |
AAGAAGGAACTGGTATTTGA+AGG | 0.457652 | 4_3:+39729623 | Msa0640600:CDS |
GTTGGATGGAGAGTTGGAAC+AGG | 0.458440 | 4_3:+39724214 | Msa0640600:CDS |
TGAAATAATGGATATAAACT+TGG | 0.458489 | 4_3:+39730039 | Msa0640600:three_prime_UTR |
TGGTGTAGAGAGAGCGCTGC+TGG | 0.459807 | 4_3:+39723383 | Msa0640600:intron |
GTTAGCATGGGCTTTGAAGC+AGG | 0.462620 | 4_3:+39723677 | Msa0640600:CDS |
TTTGTTGTTCTGATAGCGTC+AGG | 0.462935 | 4_3:-39724146 | None:intergenic |
ATCAACCACGGCATCCTTGT+TGG | 0.463766 | 4_3:-39727813 | None:intergenic |
GGGTCTTGATTCAAGTCAAA+GGG | 0.468248 | 4_3:-39723189 | None:intergenic |
TCATCCGGATATGGTGATGA+TGG | 0.469925 | 4_3:+39725716 | Msa0640600:CDS |
AAGAGGTCAGAGTTCAAAGT+TGG | 0.470704 | 4_3:+39724196 | Msa0640600:CDS |
AGGCACACTTTATAAAATCT+AGG | 0.474017 | 4_3:+39724693 | Msa0640600:intron |
ATTGCAGGACACTTGATCAT+AGG | 0.475942 | 4_3:+39725029 | Msa0640600:CDS |
CCCATGCTAACCATTCCCTT+TGG | 0.477200 | 4_3:-39723665 | None:intergenic |
GAAGAGTGCTGACAAGTTCT+CGG | 0.477844 | 4_3:+39723980 | Msa0640600:CDS |
TTCACCAGAAGTACTATTGT+GGG | 0.478100 | 4_3:+39724123 | Msa0640600:intron |
ATTTCCAATGGTTGCTGAAG+AGG | 0.478344 | 4_3:+39723422 | Msa0640600:CDS |
AGCACTAAAAGGTGGGAACT+TGG | 0.479590 | 4_3:+39727493 | Msa0640600:CDS |
AAGACAGAATTCACCGGATA+GGG | 0.480304 | 4_3:+39729420 | Msa0640600:CDS |
CTAAAAGGTGGGAACTTGGC+TGG | 0.480995 | 4_3:+39727497 | Msa0640600:CDS |
TGTGCAAGGACTGTGATTGC+AGG | 0.481850 | 4_3:+39725014 | Msa0640600:CDS |
TTCTACAAATGGGCATTAAG+TGG | 0.484146 | 4_3:+39724755 | Msa0640600:CDS |
CTTGAAACTTCAAGAGAAGA+AGG | 0.485345 | 4_3:+39729607 | Msa0640600:CDS |
TTCCTTGGCAGCTTAGGTAA+AGG | 0.488300 | 4_3:-39723459 | None:intergenic |
CCTTGCTGATGAAATGGGTA+TGG | 0.490612 | 4_3:+39723725 | Msa0640600:CDS |
CCTCCTCACACGACTACGTC+AGG | 0.490749 | 4_3:+39726890 | Msa0640600:CDS |
GGCGAATCTGAGTGTTCAAA+TGG | 0.490917 | 4_3:-39723813 | None:intergenic |
AAATTAGATTTATGGTTGAA+AGG | 0.491004 | 4_3:+39728332 | Msa0640600:CDS |
GCCACACCAATTCAATCATC+CGG | 0.492029 | 4_3:+39725701 | Msa0640600:CDS |
TCAGACGAGTACTAAAATAG+AGG | 0.492290 | 4_3:+39727901 | Msa0640600:CDS |
TTAGCGGGCCTTCATCTAAA+CGG | 0.494439 | 4_3:+39723268 | Msa0640600:CDS |
TTAGGTAAAGGTAAATCAAA+TGG | 0.496064 | 4_3:-39723447 | None:intergenic |
GTGGATCGATCAGAATTTGT+TGG | 0.497726 | 4_3:+39723560 | Msa0640600:CDS |
ATCACTATACAATGAAAGTC+AGG | 0.501026 | 4_3:+39725978 | Msa0640600:CDS |
TTACTTAAGCTGGCCTGATA+GGG | 0.501745 | 4_3:+39729802 | Msa0640600:exon |
TAAGGCGAACTAAAATAGGC+AGG | 0.503491 | 4_3:+39725789 | Msa0640600:CDS |
CAGTGTTGTTATGGCATGCT+TGG | 0.503619 | 4_3:+39723520 | Msa0640600:CDS |
ATTGCTCGATTTACTTTGAA+AGG | 0.507867 | 4_3:+39723918 | Msa0640600:CDS |
TTCAAAGTTGGATGGAGAGT+TGG | 0.508987 | 4_3:+39724208 | Msa0640600:CDS |
GAAGTATGACATTGACTGCT+CGG | 0.509109 | 4_3:+39728531 | Msa0640600:CDS |
CTGATCTTGCACTTCCGCCT+AGG | 0.509821 | 4_3:+39725816 | Msa0640600:CDS |
TTGGTTTGTACTGCCCTATC+CGG | 0.512738 | 4_3:-39729433 | None:intergenic |
GTATCTTGCGTTCAATTGGT+TGG | 0.516929 | 4_3:+39728509 | Msa0640600:CDS |
CAAATTCAGAGCAACGCCTC+CGG | 0.518369 | 4_3:-39728618 | None:intergenic |
ACTTCAAGAGAAGAAGGAAC+TGG | 0.518885 | 4_3:+39729613 | Msa0640600:CDS |
GGTGGGAACTTGGCTGGTAA+TGG | 0.518957 | 4_3:+39727503 | Msa0640600:CDS |
ACTGCTCCCACAGTTCTGTT+AGG | 0.520133 | 4_3:+39725528 | Msa0640600:CDS |
TCTGATTCATCTGACTTTAG+CGG | 0.521032 | 4_3:+39723252 | Msa0640600:CDS |
AGATTTATGGTTGAAAGGGA+TGG | 0.521533 | 4_3:+39728337 | Msa0640600:CDS |
TTGCACAGGTTATAGGAATA+GGG | 0.521546 | 4_3:-39724998 | None:intergenic |
CGATGATGAGTTATTTCCAA+TGG | 0.521862 | 4_3:+39723410 | Msa0640600:CDS |
TAGGGCAGTACAAACCAATC+AGG | 0.526743 | 4_3:+39729438 | Msa0640600:CDS |
ACAAGAGTTCCTTTGATCAC+AGG | 0.527283 | 4_3:-39723855 | None:intergenic |
GATCCAAGAATGATGTGAAC+TGG | 0.530325 | 4_3:-39728384 | None:intergenic |
TCCTTTGCCACTTCACAGCA+TGG | 0.533401 | 4_3:-39724289 | None:intergenic |
TACCTTTACCTAAGCTGCCA+AGG | 0.535158 | 4_3:+39723457 | Msa0640600:CDS |
GGCGGTTCTTCAGAGGCTCT+AGG | 0.536140 | 4_3:+39729744 | Msa0640600:CDS |
ACCAAAGGGAATGGTTAGCA+TGG | 0.538231 | 4_3:+39723664 | Msa0640600:CDS |
CTCTCCAACACGATTCTGAA+GGG | 0.541536 | 4_3:-39724783 | None:intergenic |
GGAATCCTTGCTGATGAAAT+GGG | 0.542503 | 4_3:+39723720 | Msa0640600:CDS |
TTTGAACACTCAGATTCGCC+CGG | 0.542748 | 4_3:+39723816 | Msa0640600:CDS |
CGAAGGTTCTGGTTTATCAT+GGG | 0.543237 | 4_3:+39723946 | Msa0640600:CDS |
AAGGAAAAGTGCCAATATTG+TGG | 0.545202 | 4_3:+39724071 | Msa0640600:CDS |
TCCGTTGCTGAGGTACCAAA+GGG | 0.545426 | 4_3:+39723650 | Msa0640600:intron |
GGAGCCTCTTCAGCAACCAT+TGG | 0.547174 | 4_3:-39723426 | None:intergenic |
TCCATGCTGTGAAGTGGCAA+AGG | 0.547473 | 4_3:+39724288 | Msa0640600:CDS |
GCGGTTCTTCAGAGGCTCTA+GGG | 0.548516 | 4_3:+39729745 | Msa0640600:CDS |
TTCCGTTGCTGAGGTACCAA+AGG | 0.548808 | 4_3:+39723649 | Msa0640600:intron |
TTTCTCATGAGCTTGAAAGC+CGG | 0.550380 | 4_3:+39728599 | Msa0640600:CDS |
TTTCACCAGAAGTACTATTG+TGG | 0.550801 | 4_3:+39724122 | Msa0640600:intron |
GAGTGGTGTAGAGAGAGCGC+TGG | 0.552036 | 4_3:+39723347 | Msa0640600:CDS |
AAGTATGACATTGACTGCTC+GGG | 0.552070 | 4_3:+39728532 | Msa0640600:CDS |
AAAGTCCTTCCTGTGATCAA+AGG | 0.552249 | 4_3:+39723846 | Msa0640600:CDS |
TCCTTGGTGGAACCCTGCTG+TGG | 0.554359 | 4_3:+39729385 | Msa0640600:CDS |
CTTGCTGATGAAATGGGTAT+GGG | 0.555958 | 4_3:+39723726 | Msa0640600:CDS |
TCTACTTGCAGGTTTCATTG+AGG | 0.557580 | 4_3:+39725917 | Msa0640600:intron |
AAAGCATGTGATGCCTCCTA+AGG | 0.558209 | 4_3:+39724052 | Msa0640600:CDS |
TTTATCATGGGCCAAAGAGA+TGG | 0.558538 | 4_3:+39723958 | Msa0640600:CDS |
CAAGACAGAATTCACCGGAT+AGG | 0.559118 | 4_3:+39729419 | Msa0640600:CDS |
CTTGCAGGTTTCATTGAGGA+GGG | 0.559645 | 4_3:+39725921 | Msa0640600:intron |
ATAATCATCAGTGATTCTGA+TGG | 0.560233 | 4_3:+39723216 | Msa0640600:CDS |
AGGAAGGACTTTAGAAGACC+CGG | 0.562782 | 4_3:-39723835 | None:intergenic |
CCATACCCATTTCATCAGCA+AGG | 0.563228 | 4_3:-39723725 | None:intergenic |
AGGGTCTTGATTCAAGTCAA+AGG | 0.563864 | 4_3:-39723190 | None:intergenic |
TGCTGAGGTACCAAAGGGAA+TGG | 0.566820 | 4_3:+39723655 | Msa0640600:intron |
GGTCAGAGTTCAAAGTTGGA+TGG | 0.567173 | 4_3:+39724200 | Msa0640600:CDS |
AGAAGGAACTGGTATTTGAA+GGG | 0.570503 | 4_3:+39729624 | Msa0640600:CDS |
ACTTGCAGGTTTCATTGAGG+AGG | 0.570846 | 4_3:+39725920 | Msa0640600:intron |
GAGTACTAAAATAGAGGCAT+TGG | 0.571498 | 4_3:+39727907 | Msa0640600:CDS |
AGAGGCTCTAGGGAAGTTGA+CGG | 0.572439 | 4_3:+39729755 | Msa0640600:CDS |
AATCAGATCTGACGATGCCT+CGG | 0.573266 | 4_3:-39723625 | None:intergenic |
GACTGTAGGCGGTTCTTCAG+AGG | 0.573272 | 4_3:+39729737 | Msa0640600:CDS |
AATGCAGCTGAAGACATTGG+TGG | 0.574476 | 4_3:+39723159 | Msa0640600:intron |
ATGAATTAGCGGCTGATAAG+GGG | 0.576169 | 4_3:+39722708 | Msa0640600:intron |
TTTAATGCAGCTGAAGACAT+TGG | 0.576240 | 4_3:+39723156 | Msa0640600:intron |
AATCACTGATGATTATAGTA+GGG | 0.576661 | 4_3:-39723209 | None:intergenic |
CATTTCTCCATGCTGTGAAG+TGG | 0.576787 | 4_3:+39724282 | Msa0640600:CDS |
CATCCGGATATGGTGATGAT+GGG | 0.576924 | 4_3:+39725717 | Msa0640600:CDS |
TGCAATCACAGTCCTTGCAC+AGG | 0.578969 | 4_3:-39725012 | None:intergenic |
GTTGCAATTCCCGTTTAGCA+AGG | 0.580293 | 4_3:-39723776 | None:intergenic |
CTCATGAGCTTGAAAGCCGG+AGG | 0.580922 | 4_3:+39728602 | Msa0640600:CDS |
GCAAAGGATCATATTGGATG+AGG | 0.582737 | 4_3:+39724304 | Msa0640600:CDS |
GAGCATTCTGTAACTAGAGG+TGG | 0.586266 | 4_3:+39723699 | Msa0640600:CDS |
AGTGAGTAATTTAGAGCATG+AGG | 0.586524 | 4_3:-39727777 | None:intergenic |
GCTCTCCAACACGATTCTGA+AGG | 0.586678 | 4_3:-39724784 | None:intergenic |
CAAGCATGCCATAACAACAC+TGG | 0.586806 | 4_3:-39723519 | None:intergenic |
GACTTCCAACAAGGATGCCG+TGG | 0.587500 | 4_3:+39727808 | Msa0640600:CDS |
GTTACCAGAATCGATTTCAT+CGG | 0.588810 | 4_3:-39721860 | None:intergenic |
AGTGATGAATGAGACGGCCG+AGG | 0.589406 | 4_3:+39723608 | Msa0640600:CDS |
CCCTCCTTTAATAGGACTGT+AGG | 0.590156 | 4_3:+39729723 | Msa0640600:intron |
GGGGCATGATACTTGTCCTA+AGG | 0.591411 | 4_3:-39727756 | None:intergenic |
AACTCTTGTCATCTGTCCCG+TGG | 0.591790 | 4_3:+39723869 | Msa0640600:CDS |
GAAGTGGCAAAGGATCATAT+TGG | 0.591835 | 4_3:+39724298 | Msa0640600:CDS |
CCAAAGGGAATGGTTAGCAT+GGG | 0.594360 | 4_3:+39723665 | Msa0640600:CDS |
AAATCTGATTCTGATTATGA+AGG | 0.599158 | 4_3:+39722803 | Msa0640600:CDS |
AAAATGCCTAACAGAACTGT+GGG | 0.602819 | 4_3:-39725534 | None:intergenic |
TTGAACACTCAGATTCGCCC+GGG | 0.602929 | 4_3:+39723817 | Msa0640600:CDS |
AAGACACGGTCCAGAAAGAG+AGG | 0.603186 | 4_3:+39723294 | Msa0640600:CDS |
TGTTGATTTGACTTCCAACA+AGG | 0.605045 | 4_3:+39727799 | Msa0640600:CDS |
GGAAACATGAACATGAGAAG+TGG | 0.605491 | 4_3:+39723541 | Msa0640600:CDS |
CCATTGAGTGACAGCAACCA+CGG | 0.609926 | 4_3:-39723886 | None:intergenic |
TCATCACTTCACTCTGATCG+AGG | 0.610619 | 4_3:-39723593 | None:intergenic |
ATAGATACTGGTAAGTTACA+TGG | 0.610717 | 4_3:-39729900 | None:intergenic |
CATTGAGTGACAGCAACCAC+GGG | 0.611625 | 4_3:-39723885 | None:intergenic |
AAGTAAATTTACCTTCTGCA+GGG | 0.612205 | 4_3:-39728419 | None:intergenic |
TGAAAGGGATGGTTCTGCAA+AGG | 0.613745 | 4_3:+39728348 | Msa0640600:CDS |
CTGCAGCAGCACTAAAAGGT+GGG | 0.619966 | 4_3:+39727486 | Msa0640600:CDS |
ACACCCCTTCAGAATCGTGT+TGG | 0.620062 | 4_3:+39724779 | Msa0640600:CDS |
GAGCCTGACGCTCCACAGCA+GGG | 0.621083 | 4_3:-39729397 | None:intergenic |
GTGAGTAATTTAGAGCATGA+GGG | 0.622262 | 4_3:-39727776 | None:intergenic |
CATCAACTACTCCCTGCAGA+AGG | 0.623237 | 4_3:+39728408 | Msa0640600:CDS |
ACTGCAGCAGCACTAAAAGG+TGG | 0.623895 | 4_3:+39727485 | Msa0640600:CDS |
ATTCCCGTTTAGCAAGGACA+AGG | 0.625183 | 4_3:-39723770 | None:intergenic |
TGATAAGGGGAAGCAGCCGA+TGG | 0.627163 | 4_3:+39722721 | Msa0640600:CDS |
CATCACTTCACTCTGATCGA+GGG | 0.628521 | 4_3:-39723592 | None:intergenic |
AAGGCGAACTAAAATAGGCA+GGG | 0.631256 | 4_3:+39725790 | Msa0640600:CDS |
CAGGAGCATTCTGTAACTAG+AGG | 0.632955 | 4_3:+39723696 | Msa0640600:CDS |
TGAGTAATTTAGAGCATGAG+GGG | 0.636418 | 4_3:-39727775 | None:intergenic |
TCCTTTAATAGGACTGTAGG+CGG | 0.636419 | 4_3:+39729726 | Msa0640600:intron |
AACGTGAAACATGAATTATG+TGG | 0.638208 | 4_3:+39729988 | Msa0640600:three_prime_UTR |
AACAAAGAGAAATTTCAAGT+CGG | 0.640962 | 4_3:-39729781 | None:intergenic |
TTGGATGGAGAGTTGGAACA+GGG | 0.642656 | 4_3:+39724215 | Msa0640600:CDS |
AGGCTCAAGACAGAATTCAC+CGG | 0.644344 | 4_3:+39729414 | Msa0640600:CDS |
TGATACTGTTGAAGATCCAG+TGG | 0.645228 | 4_3:+39727556 | Msa0640600:CDS |
TGTCATTGAAAACACAATCG+AGG | 0.649039 | 4_3:+39729577 | Msa0640600:CDS |
TAAGGGGAAGCAGCCGATGG+AGG | 0.649205 | 4_3:+39722724 | Msa0640600:CDS |
TTGCTGATGAAATGGGTATG+GGG | 0.649672 | 4_3:+39723727 | Msa0640600:CDS |
CTATTCCTATAACCTGTGCA+AGG | 0.650791 | 4_3:+39725000 | Msa0640600:CDS |
GAGTGAAGTGATGAATGAGA+CGG | 0.651002 | 4_3:+39723602 | Msa0640600:CDS |
TTGAAAACACAATCGAGGAG+AGG | 0.651748 | 4_3:+39729582 | Msa0640600:CDS |
TCACCTGACGTAGTCGTGTG+AGG | 0.653741 | 4_3:-39726893 | None:intergenic |
GCGCTCTCTCTACACCACTC+AGG | 0.656151 | 4_3:-39723344 | None:intergenic |
AATAACAACATATTCTACTG+TGG | 0.657369 | 4_3:+39724016 | Msa0640600:CDS |
GAGTTCCTTTGATCACAGGA+AGG | 0.662792 | 4_3:-39723851 | None:intergenic |
TACTTTGAAAGGTAGCACGA+AGG | 0.662814 | 4_3:+39723929 | Msa0640600:CDS |
TCTCCAACACGATTCTGAAG+GGG | 0.662928 | 4_3:-39724782 | None:intergenic |
TCCGGATGATTGAATTGGTG+TGG | 0.666969 | 4_3:-39725702 | None:intergenic |
CATCTAAACGGAGAAAGACA+CGG | 0.667229 | 4_3:+39723280 | Msa0640600:CDS |
GGAAGGACTTTAGAAGACCC+GGG | 0.667648 | 4_3:-39723834 | None:intergenic |
TCCACAGCAGGGTTCCACCA+AGG | 0.675941 | 4_3:-39729386 | None:intergenic |
GGTGATGTTGAACAAGAATG+TGG | 0.687600 | 4_3:+39727524 | Msa0640600:CDS |
GCGCTGGAGTTCGATCTGAG+TGG | 0.688599 | 4_3:+39723363 | Msa0640600:CDS |
TTCCCGTTTAGCAAGGACAA+GGG | 0.690886 | 4_3:-39723769 | None:intergenic |
CCTGACGTAGTCGTGTGAGG+AGG | 0.691578 | 4_3:-39726890 | None:intergenic |
GGCTCTAGGGAAGTTGACGG+TGG | 0.703347 | 4_3:+39729758 | Msa0640600:CDS |
GGTCTTGATTCAAGTCAAAG+GGG | 0.711736 | 4_3:-39723188 | None:intergenic |
CAAGAACTCACGATCCTAGG+CGG | 0.713689 | 4_3:-39725830 | None:intergenic |
ATAGAATCTACAGACCTGAG+TGG | 0.729278 | 4_3:+39723330 | Msa0640600:CDS |
GGTTCCACCAAGGATCCATG+AGG | 0.748488 | 4_3:-39729376 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGGTTATTTTTTATTTATAT+TGG | + | chr4_3:39726600-39726619 | Msa0640600:intron | 10.0% |
!! | TAAGAAATAAGAAATAATTA+TGG | + | chr4_3:39726959-39726978 | Msa0640600:intron | 10.0% |
!!! | ATATATTTTACTAGAAAATA+AGG | - | chr4_3:39727349-39727368 | None:intergenic | 10.0% |
!!! | CATAATTTTTTTTTGTAATA+TGG | + | chr4_3:39728194-39728213 | Msa0640600:intron | 10.0% |
!!! | TCATTTTCATTAATTATTAG+TGG | + | chr4_3:39722248-39722267 | Msa0640600:intron | 15.0% |
!! | TTTAATATAATTGCATGTTT+CGG | - | chr4_3:39722274-39722293 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTTTTTTTTGCG+TGG | + | chr4_3:39722388-39722407 | Msa0640600:intron | 15.0% |
!!! | TATTTGTTTTCAATGTTTTA+TGG | + | chr4_3:39722685-39722704 | Msa0640600:intron | 15.0% |
!!! | TTTAGTGATAAATTTCATTT+TGG | + | chr4_3:39723102-39723121 | Msa0640600:intron | 15.0% |
!! | TAGAAAAATAAAGAAAACAA+TGG | + | chr4_3:39724508-39724527 | Msa0640600:intron | 15.0% |
!! | ATTATTACGAATATTATGTT+AGG | + | chr4_3:39724594-39724613 | Msa0640600:intron | 15.0% |
!! | ATGACATTATATTTATTTAG+TGG | + | chr4_3:39726098-39726117 | Msa0640600:intron | 15.0% |
!! | TGACATTATATTTATTTAGT+GGG | + | chr4_3:39726099-39726118 | Msa0640600:intron | 15.0% |
!!! | TTTTATCTTCTTTTTTTTGT+TGG | + | chr4_3:39726382-39726401 | Msa0640600:intron | 15.0% |
!!! | TCATTTTTGTAAAGTTAAAA+TGG | - | chr4_3:39726435-39726454 | None:intergenic | 15.0% |
!! | TATATAAAAAAAATCATGCA+AGG | - | chr4_3:39726786-39726805 | None:intergenic | 15.0% |
!!! | AGAAATCAGAATTTATTTTA+TGG | + | chr4_3:39726932-39726951 | Msa0640600:intron | 15.0% |
!!! | GAAATCAGAATTTATTTTAT+GGG | + | chr4_3:39726933-39726952 | Msa0640600:intron | 15.0% |
!!! | TTTTTCTGTTTGTTAAATAT+AGG | + | chr4_3:39728848-39728867 | Msa0640600:intron | 15.0% |
!! | TGTTAACTAAAATGAAATAA+TGG | + | chr4_3:39730027-39730046 | Msa0640600:three_prime_UTR | 15.0% |
!!! | ATTTTTTTTCTTCTGTTGTT+TGG | + | chr4_3:39721956-39721975 | Msa0640600:intron | 20.0% |
!!! | ATACTTGATTGTTTTGATTT+AGG | + | chr4_3:39722100-39722119 | Msa0640600:intron | 20.0% |
!!! | TACTTGATTGTTTTGATTTA+GGG | + | chr4_3:39722101-39722120 | Msa0640600:intron | 20.0% |
!! | TTTCTGTTAAGATGAAAAAT+TGG | + | chr4_3:39723060-39723079 | Msa0640600:intron | 20.0% |
!! | ACTAAATTTGCAGTATAAAA+GGG | - | chr4_3:39723088-39723107 | None:intergenic | 20.0% |
!!! | TTTTCCATTAATTTGAAAAC+AGG | + | chr4_3:39724673-39724692 | Msa0640600:intron | 20.0% |
!! | ATCTTGTGTATAAAATTACA+AGG | - | chr4_3:39725631-39725650 | None:intergenic | 20.0% |
!! | GACATTATATTTATTTAGTG+GGG | + | chr4_3:39726100-39726119 | Msa0640600:intron | 20.0% |
!! | TAAAAATTAATTAAGCGTGA+AGG | - | chr4_3:39726360-39726379 | None:intergenic | 20.0% |
!!! | TTTTGTAAAGTTAAAATGGT+GGG | - | chr4_3:39726431-39726450 | None:intergenic | 20.0% |
!!! | TTTTTGTAAAGTTAAAATGG+TGG | - | chr4_3:39726432-39726451 | None:intergenic | 20.0% |
!! | TAACTTTACAAAAATGAAGA+TGG | + | chr4_3:39726438-39726457 | Msa0640600:intron | 20.0% |
!! | AAAAATAAATTACAGCAAGA+AGG | + | chr4_3:39726549-39726568 | Msa0640600:intron | 20.0% |
!!! | ACTTTTTTCAAATTAGAAAC+TGG | + | chr4_3:39727206-39727225 | Msa0640600:intron | 20.0% |
!! | CAAGAACAATAATCATAAAT+CGG | + | chr4_3:39727232-39727251 | Msa0640600:intron | 20.0% |
!! | ACTTATATTATATACAAGCA+CGG | - | chr4_3:39727617-39727636 | None:intergenic | 20.0% |
!!! | TTCTTTTACTATATTGATTC+AGG | + | chr4_3:39727679-39727698 | Msa0640600:intron | 20.0% |
!! | TGATAAAACAACAACAATTA+AGG | + | chr4_3:39727832-39727851 | Msa0640600:CDS | 20.0% |
!! | GATAAAACAACAACAATTAA+GGG | + | chr4_3:39727833-39727852 | Msa0640600:CDS | 20.0% |
!! | ATTGGTATGTATAAATTTGT+TGG | + | chr4_3:39727925-39727944 | Msa0640600:intron | 20.0% |
!!! | AAAATAATGCTTTTATCAGT+TGG | + | chr4_3:39728221-39728240 | Msa0640600:intron | 20.0% |
!! | AAATTAGATTTATGGTTGAA+AGG | + | chr4_3:39728332-39728351 | Msa0640600:CDS | 20.0% |
!! | AATTAGATTTATGGTTGAAA+GGG | + | chr4_3:39728333-39728352 | Msa0640600:CDS | 20.0% |
!! | ATCATCAGTAAATTTCTTAA+TGG | - | chr4_3:39728564-39728583 | None:intergenic | 20.0% |
!!! | GTCAATATTTTGGTTTTTTA+CGG | + | chr4_3:39728683-39728702 | Msa0640600:intron | 20.0% |
!! | TAGAATTGAAAGTCAATTAA+AGG | - | chr4_3:39728997-39729016 | None:intergenic | 20.0% |
!! | ATTGGATAAAATTATAAAGC+AGG | - | chr4_3:39729069-39729088 | None:intergenic | 20.0% |
!!! | GTTTGAATATGTTACTTATT+CGG | + | chr4_3:39729138-39729157 | Msa0640600:intron | 20.0% |
!!! | CTAAATTTTTAAAACAGAGT+AGG | + | chr4_3:39729468-39729487 | Msa0640600:intron | 20.0% |
!! | AAGTTAATAGAAAAACATGT+AGG | + | chr4_3:39729499-39729518 | Msa0640600:intron | 20.0% |
!! | TGAAGCTATAATTAAATTGA+AGG | + | chr4_3:39729653-39729672 | Msa0640600:intron | 20.0% |
!!! | GATACTTGATATACATTTTT+TGG | + | chr4_3:39729842-39729861 | Msa0640600:three_prime_UTR | 20.0% |
!!! | TGAAATAATGGATATAAACT+TGG | + | chr4_3:39730039-39730058 | Msa0640600:three_prime_UTR | 20.0% |
! | AATGATAAATGAGAGAGTAA+AGG | - | chr4_3:39721901-39721920 | None:intergenic | 25.0% |
!! | TTATGAAACGTTTGTGTTTT+TGG | + | chr4_3:39722011-39722030 | Msa0640600:intron | 25.0% |
! | AAATCTGAATTGTGATAGTA+AGG | + | chr4_3:39722073-39722092 | Msa0640600:intron | 25.0% |
! | AATCTGAATTGTGATAGTAA+GGG | + | chr4_3:39722074-39722093 | Msa0640600:intron | 25.0% |
!! | ATGTTTTATGGATGAATTAG+CGG | + | chr4_3:39722697-39722716 | Msa0640600:intron | 25.0% |
! | AAATCTGATTCTGATTATGA+AGG | + | chr4_3:39722803-39722822 | Msa0640600:CDS | 25.0% |
!! | TGTTATCTAGTTTATCACAA+AGG | + | chr4_3:39722898-39722917 | Msa0640600:intron | 25.0% |
!!! | GATTCTAGTTAATTTGTGAT+TGG | + | chr4_3:39722996-39723015 | Msa0640600:intron | 25.0% |
! | CACTAAATTTGCAGTATAAA+AGG | - | chr4_3:39723089-39723108 | None:intergenic | 25.0% |
! | AATCACTGATGATTATAGTA+GGG | - | chr4_3:39723212-39723231 | None:intergenic | 25.0% |
! | TTAGGTAAAGGTAAATCAAA+TGG | - | chr4_3:39723450-39723469 | None:intergenic | 25.0% |
! | AAAAGCAAAGAAGACAAAAA+AGG | + | chr4_3:39723485-39723504 | Msa0640600:CDS | 25.0% |
! | AAAGCAAAGAAGACAAAAAA+GGG | + | chr4_3:39723486-39723505 | Msa0640600:CDS | 25.0% |
! | AATAACAACATATTCTACTG+TGG | + | chr4_3:39724016-39724035 | Msa0640600:CDS | 25.0% |
! | GAAATAATCTTCCACAATAT+TGG | - | chr4_3:39724085-39724104 | None:intergenic | 25.0% |
! | CTATAACAGTAGTTAAACAA+GGG | - | chr4_3:39724491-39724510 | None:intergenic | 25.0% |
! | TCTATAACAGTAGTTAAACA+AGG | - | chr4_3:39724492-39724511 | None:intergenic | 25.0% |
! | GCATTGTATTTGAATTATGT+TGG | - | chr4_3:39724944-39724963 | None:intergenic | 25.0% |
! | GCTAAATTAGATTCCAAAAA+GGG | - | chr4_3:39725082-39725101 | None:intergenic | 25.0% |
! | TGCTAAATTAGATTCCAAAA+AGG | - | chr4_3:39725083-39725102 | None:intergenic | 25.0% |
!!! | TTTTTGGAATCTAATTTAGC+AGG | + | chr4_3:39725082-39725101 | Msa0640600:intron | 25.0% |
! | AAAAACTACTACAATCTTGA+AGG | + | chr4_3:39725219-39725238 | Msa0640600:intron | 25.0% |
!!! | ATATGATATGCCTTCTTTTT+TGG | + | chr4_3:39725291-39725310 | Msa0640600:intron | 25.0% |
!!! | TTTTAAAGAGCATAGTCTTA+AGG | + | chr4_3:39725771-39725790 | Msa0640600:CDS | 25.0% |
! | AGAAATTCATACTTAGTCAT+CGG | - | chr4_3:39725860-39725879 | None:intergenic | 25.0% |
! | TTATATTTATTTAGTGGGGT+TGG | + | chr4_3:39726104-39726123 | Msa0640600:intron | 25.0% |
!! | TTTATTGTTGATTGTTGGTT+AGG | + | chr4_3:39726202-39726221 | Msa0640600:intron | 25.0% |
!!! | CTTCTTTTTTTTGTTGGTAT+AGG | + | chr4_3:39726388-39726407 | Msa0640600:intron | 25.0% |
! | CAAAAATGAAGATGGAAAAT+TGG | + | chr4_3:39726446-39726465 | Msa0640600:intron | 25.0% |
! | ATTGGAAGGAAAATAAATGA+TGG | + | chr4_3:39726464-39726483 | Msa0640600:intron | 25.0% |
!! | TTTGTCACAGTTATCTTTTT+CGG | + | chr4_3:39726524-39726543 | Msa0640600:intron | 25.0% |
!!! | CTCTATAATTACTTTTACTG+AGG | - | chr4_3:39726582-39726601 | None:intergenic | 25.0% |
! | CTCAGTAAAAGTAATTATAG+AGG | + | chr4_3:39726580-39726599 | Msa0640600:intron | 25.0% |
!! | TAATGTTAATAGCAGGTTTT+GGG | - | chr4_3:39726664-39726683 | None:intergenic | 25.0% |
!! | ATAATGTTAATAGCAGGTTT+TGG | - | chr4_3:39726665-39726684 | None:intergenic | 25.0% |
! | CTATCTATAATGTTAATAGC+AGG | - | chr4_3:39726671-39726690 | None:intergenic | 25.0% |
!!! | GATTTTTTTTATATAAGCCC+TGG | + | chr4_3:39726791-39726810 | Msa0640600:intron | 25.0% |
! | AAAGCAAATTCATAAAACCA+GGG | - | chr4_3:39726811-39726830 | None:intergenic | 25.0% |
! | ATTATGGACACTCTAAATAT+TGG | + | chr4_3:39726975-39726994 | Msa0640600:intron | 25.0% |
!!! | TTTTTTTAGTTTTTCCTTGC+TGG | + | chr4_3:39727060-39727079 | Msa0640600:intron | 25.0% |
!! | ATTCATTTAGAATCCAACAT+TGG | + | chr4_3:39727086-39727105 | Msa0640600:intron | 25.0% |
! | ACAATAATCATAAATCGGAA+AGG | + | chr4_3:39727237-39727256 | Msa0640600:intron | 25.0% |
! | AGTAGTACATTAAAATTAGC+AGG | - | chr4_3:39727644-39727663 | None:intergenic | 25.0% |
! | ATATTAAGCATCTTTATTCC+TGG | + | chr4_3:39727963-39727982 | Msa0640600:intron | 25.0% |
! | GAGAGAAGAAATTAGATTTA+TGG | + | chr4_3:39728324-39728343 | Msa0640600:intron | 25.0% |
! | TATTGACATAAACATGCAAA+AGG | - | chr4_3:39728670-39728689 | None:intergenic | 25.0% |
!! | GCATGTTTATGTCAATATTT+TGG | + | chr4_3:39728673-39728692 | Msa0640600:intron | 25.0% |
! | TATGTTCTACAATTCTATTC+AGG | + | chr4_3:39728803-39728822 | Msa0640600:intron | 25.0% |
!!! | AATAGCAAATAGTTGATAAG+CGG | + | chr4_3:39728886-39728905 | Msa0640600:intron | 25.0% |
! | TCAATTAAAGGACAAACTAT+GGG | - | chr4_3:39728985-39729004 | None:intergenic | 25.0% |
! | AATACTCATTGAATGTTTGA+TGG | + | chr4_3:39729115-39729134 | Msa0640600:intron | 25.0% |
! | ATACTCATTGAATGTTTGAT+GGG | + | chr4_3:39729116-39729135 | Msa0640600:intron | 25.0% |
! | TACATCAAAGGTTTAAATAG+CGG | - | chr4_3:39729245-39729264 | None:intergenic | 25.0% |
! | AATTTAGTGTTATACCTGAT+TGG | - | chr4_3:39729455-39729474 | None:intergenic | 25.0% |
! | TAATAGAAAAACATGTAGGT+TGG | + | chr4_3:39729503-39729522 | Msa0640600:intron | 25.0% |
! | GGAAATGTCATTGTTTATTA+TGG | - | chr4_3:39729695-39729714 | None:intergenic | 25.0% |
!! | AACAAAGAGAAATTTCAAGT+CGG | - | chr4_3:39729784-39729803 | None:intergenic | 25.0% |
! | TTAGCTGTAAGTAGATATAT+TGG | + | chr4_3:39729943-39729962 | Msa0640600:three_prime_UTR | 25.0% |
!!! | TTTTTGGTTATGTTGATTGA+CGG | + | chr4_3:39730089-39730108 | Msa0640600:three_prime_UTR | 25.0% |
!!! | CACACTGTTGTTTTATGAAT+CGG | - | chr4_3:39721694-39721713 | None:intergenic | 30.0% |
GAGAGAGAAAGTGATAATTA+GGG | - | chr4_3:39721787-39721806 | None:intergenic | 30.0% | |
AGAGAGAGAAAGTGATAATT+AGG | - | chr4_3:39721788-39721807 | None:intergenic | 30.0% | |
TTGAATGTAATTGCATGTGT+CGG | - | chr4_3:39722223-39722242 | None:intergenic | 30.0% | |
! | TCATTTTCAGTGATAATTGC+CGG | + | chr4_3:39722508-39722527 | Msa0640600:intron | 30.0% |
!!! | TTTTTATTTCTAATGCAGCG+CGG | + | chr4_3:39722630-39722649 | Msa0640600:intron | 30.0% |
! | TTTTCATCAATATCCTCCAT+CGG | - | chr4_3:39722740-39722759 | None:intergenic | 30.0% |
GACTTCAAACACATGAATAA+AGG | - | chr4_3:39722840-39722859 | None:intergenic | 30.0% | |
!! | TGTTTGTTGTCTTAAACTTG+AGG | + | chr4_3:39722944-39722963 | Msa0640600:intron | 30.0% |
AATGAGGAGTGAAATTTACT+TGG | + | chr4_3:39723025-39723044 | Msa0640600:intron | 30.0% | |
GAATCACTGATGATTATAGT+AGG | - | chr4_3:39723213-39723232 | None:intergenic | 30.0% | |
ATAATCATCAGTGATTCTGA+TGG | + | chr4_3:39723216-39723235 | Msa0640600:CDS | 30.0% | |
!!! | TTCTTTGCTTTTTTCTTCCT+TGG | - | chr4_3:39723477-39723496 | None:intergenic | 30.0% |
ATTGCTCGATTTACTTTGAA+AGG | + | chr4_3:39723918-39723937 | Msa0640600:CDS | 30.0% | |
AACATATTCTACTGTGGAAT+CGG | + | chr4_3:39724022-39724041 | Msa0640600:CDS | 30.0% | |
TTCTGGTGAAAAACTAAACT+GGG | - | chr4_3:39724113-39724132 | None:intergenic | 30.0% | |
CAAACCAAGAAAAAGAAAAG+AGG | + | chr4_3:39724179-39724198 | Msa0640600:CDS | 30.0% | |
! | GTTGTGATAATGTAGCATTA+TGG | + | chr4_3:39724330-39724349 | Msa0640600:intron | 30.0% |
! | TACTTTTCAGAAAGACAAAG+TGG | - | chr4_3:39724377-39724396 | None:intergenic | 30.0% |
! | TGTGCCTGTTTTCAAATTAA+TGG | - | chr4_3:39724680-39724699 | None:intergenic | 30.0% |
AGGCACACTTTATAAAATCT+AGG | + | chr4_3:39724693-39724712 | Msa0640600:intron | 30.0% | |
CTTAGAGTCTTTCTACAAAT+GGG | + | chr4_3:39724745-39724764 | Msa0640600:CDS | 30.0% | |
! | TGGTAAATTACCAGTCTTTT+TGG | + | chr4_3:39724816-39724835 | Msa0640600:intron | 30.0% |
TATATTACTGCCAAAAAGAC+TGG | - | chr4_3:39724829-39724848 | None:intergenic | 30.0% | |
!! | CAAAAAGGGCATTGAATATA+CGG | - | chr4_3:39725068-39725087 | None:intergenic | 30.0% |
TGAATATCCTCCAAAAAAGA+AGG | - | chr4_3:39725304-39725323 | None:intergenic | 30.0% | |
TTCAAACAGAGTAAACACTT+CGG | - | chr4_3:39725383-39725402 | None:intergenic | 30.0% | |
TTCTCTCATTCTCTCTAATA+TGG | - | chr4_3:39725600-39725619 | None:intergenic | 30.0% | |
GAAATTCATACTTAGTCATC+GGG | - | chr4_3:39725859-39725878 | None:intergenic | 30.0% | |
ATCACTATACAATGAAAGTC+AGG | + | chr4_3:39725978-39725997 | Msa0640600:CDS | 30.0% | |
! | ACATTTTAGGCAGTAAGATA+AGG | - | chr4_3:39726029-39726048 | None:intergenic | 30.0% |
TTATCTTACTGCCTAAAATG+TGG | + | chr4_3:39726028-39726047 | Msa0640600:intron | 30.0% | |
! | TCAGGTTTATTGTTGATTGT+TGG | + | chr4_3:39726197-39726216 | Msa0640600:intron | 30.0% |
AATGAAAGGAAATAAACCAG+AGG | - | chr4_3:39726254-39726273 | None:intergenic | 30.0% | |
ATACTTCCTCTTTGAATTGA+CGG | + | chr4_3:39726310-39726329 | Msa0640600:intron | 30.0% | |
AATGAAGATGGAAAATTGGA+AGG | + | chr4_3:39726450-39726469 | Msa0640600:intron | 30.0% | |
AAAAGATAACTGTGACAAAC+AGG | - | chr4_3:39726523-39726542 | None:intergenic | 30.0% | |
TAAATTACAGCAAGAAGGAA+AGG | + | chr4_3:39726554-39726573 | Msa0640600:intron | 30.0% | |
! | AATGTTAATAGCAGGTTTTG+GGG | - | chr4_3:39726663-39726682 | None:intergenic | 30.0% |
!! | ACAGCTATTTAATTTGAGCA+TGG | - | chr4_3:39726724-39726743 | None:intergenic | 30.0% |
GAAAGCAAATTCATAAAACC+AGG | - | chr4_3:39726812-39726831 | None:intergenic | 30.0% | |
!! | ATTGGTGTGGAAATTAGTTT+TGG | + | chr4_3:39727104-39727123 | Msa0640600:intron | 30.0% |
ACTATTGAATTGCTATCCTA+TGG | - | chr4_3:39727265-39727284 | None:intergenic | 30.0% | |
AGAAAATATGTACTAACCAC+TGG | - | chr4_3:39727575-39727594 | None:intergenic | 30.0% | |
AGTACATTAAAATTAGCAGG+AGG | - | chr4_3:39727641-39727660 | None:intergenic | 30.0% | |
!!! | TGTTGTTGTTTTATCAACCA+CGG | - | chr4_3:39727828-39727847 | None:intergenic | 30.0% |
! | GATCTTCAAGCATTTTAAAC+AGG | + | chr4_3:39727861-39727880 | Msa0640600:CDS | 30.0% |
ATTTATCAATTGCATCTTGC+AGG | - | chr4_3:39728034-39728053 | None:intergenic | 30.0% | |
!!! | ACATTTTGATTATCTGCAAG+TGG | + | chr4_3:39728074-39728093 | Msa0640600:intron | 30.0% |
!!! | CATTTTGATTATCTGCAAGT+GGG | + | chr4_3:39728075-39728094 | Msa0640600:intron | 30.0% |
!!! | ATTTTGATTATCTGCAAGTG+GGG | + | chr4_3:39728076-39728095 | Msa0640600:intron | 30.0% |
TATGTGACTAAGTAAGGTTT+GGG | + | chr4_3:39728127-39728146 | Msa0640600:intron | 30.0% | |
CGTAAAATATATGCACTTGA+CGG | - | chr4_3:39728257-39728276 | None:intergenic | 30.0% | |
AAGTAAATTTACCTTCTGCA+GGG | - | chr4_3:39728422-39728441 | None:intergenic | 30.0% | |
TGAAAATAAGGATGATGACA+TGG | + | chr4_3:39728466-39728485 | Msa0640600:intron | 30.0% | |
! | ATGAGAAAAATTTTGCAGTC+TGG | - | chr4_3:39728587-39728606 | None:intergenic | 30.0% |
TTCTACAATTCTATTCAGGA+TGG | + | chr4_3:39728807-39728826 | Msa0640600:intron | 30.0% | |
TCTACAATTCTATTCAGGAT+GGG | + | chr4_3:39728808-39728827 | Msa0640600:intron | 30.0% | |
TGTTAAATATAGGCTCTGTT+TGG | + | chr4_3:39728858-39728877 | Msa0640600:intron | 30.0% | |
GTCAATTAAAGGACAAACTA+TGG | - | chr4_3:39728986-39729005 | None:intergenic | 30.0% | |
AAATTATAAAGCAGGATAGC+AGG | - | chr4_3:39729061-39729080 | None:intergenic | 30.0% | |
TATTCAACAAGTAGTCTGTT+TGG | - | chr4_3:39729099-39729118 | None:intergenic | 30.0% | |
!! | TTATTTTGCCATTCGTAAGT+TGG | + | chr4_3:39729299-39729318 | Msa0640600:intron | 30.0% |
! | TATTTTGCCATTCGTAAGTT+GGG | + | chr4_3:39729300-39729319 | Msa0640600:intron | 30.0% |
! | TTTCTCTTTGTTACTTAAGC+TGG | + | chr4_3:39729792-39729811 | Msa0640600:exon | 30.0% |
ATAGATACTGGTAAGTTACA+TGG | - | chr4_3:39729903-39729922 | None:intergenic | 30.0% | |
AACGTGAAACATGAATTATG+TGG | + | chr4_3:39729988-39730007 | Msa0640600:three_prime_UTR | 30.0% | |
!!! | ACTGTTGTTTTATGAATCGG+CGG | - | chr4_3:39721691-39721710 | None:intergenic | 35.0% |
! | TAATTAGGGTTTTGCGAATG+AGG | - | chr4_3:39721773-39721792 | None:intergenic | 35.0% |
! | GTTACCAGAATCGATTTCAT+CGG | - | chr4_3:39721863-39721882 | None:intergenic | 35.0% |
GTGCTACAGAAAATCAAACA+TGG | - | chr4_3:39722146-39722165 | None:intergenic | 35.0% | |
TTGAGGAAATGTTTGTGATG+TGG | + | chr4_3:39722961-39722980 | Msa0640600:intron | 35.0% | |
TGAGGAAATGTTTGTGATGT+GGG | + | chr4_3:39722962-39722981 | Msa0640600:intron | 35.0% | |
TTGTGATTGGACTTTGAATG+AGG | + | chr4_3:39723009-39723028 | Msa0640600:intron | 35.0% | |
TTTAATGCAGCTGAAGACAT+TGG | + | chr4_3:39723156-39723175 | Msa0640600:intron | 35.0% | |
TCTGATTCATCTGACTTTAG+CGG | + | chr4_3:39723252-39723271 | Msa0640600:CDS | 35.0% | |
! | CGATGATGAGTTATTTCCAA+TGG | + | chr4_3:39723410-39723429 | Msa0640600:CDS | 35.0% |
! | ATCCTAAACCAGTGTTGTTA+TGG | + | chr4_3:39723511-39723530 | Msa0640600:CDS | 35.0% |
! | CAATATTGGCACTTTTCCTT+AGG | - | chr4_3:39724071-39724090 | None:intergenic | 35.0% |
!! | AAGGAAAAGTGCCAATATTG+TGG | + | chr4_3:39724071-39724090 | Msa0640600:CDS | 35.0% |
CTTCTGGTGAAAAACTAAAC+TGG | - | chr4_3:39724114-39724133 | None:intergenic | 35.0% | |
!! | TTTCACCAGAAGTACTATTG+TGG | + | chr4_3:39724122-39724141 | Msa0640600:intron | 35.0% |
!! | TTCACCAGAAGTACTATTGT+GGG | + | chr4_3:39724123-39724142 | Msa0640600:intron | 35.0% |
! | CTGACCTCTTTTCTTTTTCT+TGG | - | chr4_3:39724186-39724205 | None:intergenic | 35.0% |
! | ACAGGGCTTTATCAAGAAAA+AGG | + | chr4_3:39724232-39724251 | Msa0640600:CDS | 35.0% |
AAAAAGGAAGACGATCAAGA+AGG | + | chr4_3:39724248-39724267 | Msa0640600:CDS | 35.0% | |
! | CTTGCGTTAGTTTAGAAACA+GGG | - | chr4_3:39724456-39724475 | None:intergenic | 35.0% |
! | ACTTGCGTTAGTTTAGAAAC+AGG | - | chr4_3:39724457-39724476 | None:intergenic | 35.0% |
CCATTTGTAGAAAGACTCTA+AGG | - | chr4_3:39724747-39724766 | None:intergenic | 35.0% | |
CCTTAGAGTCTTTCTACAAA+TGG | + | chr4_3:39724744-39724763 | Msa0640600:CDS | 35.0% | |
TTCTACAAATGGGCATTAAG+TGG | + | chr4_3:39724755-39724774 | Msa0640600:CDS | 35.0% | |
TGTTGGAGAGCTATATTCTT+TGG | + | chr4_3:39724796-39724815 | Msa0640600:CDS | 35.0% | |
ATACAATGCCATGTTTATGC+AGG | + | chr4_3:39724955-39724974 | Msa0640600:intron | 35.0% | |
AAATCGTACCTGCATAAACA+TGG | - | chr4_3:39724966-39724985 | None:intergenic | 35.0% | |
TTGCACAGGTTATAGGAATA+GGG | - | chr4_3:39725001-39725020 | None:intergenic | 35.0% | |
! | CGTATATTCAATGCCCTTTT+TGG | + | chr4_3:39725066-39725085 | Msa0640600:intron | 35.0% |
TTGATGTATTTAATGCCGTC+TGG | + | chr4_3:39725244-39725263 | Msa0640600:intron | 35.0% | |
TGATGTATTTAATGCCGTCT+GGG | + | chr4_3:39725245-39725264 | Msa0640600:intron | 35.0% | |
!!! | TGATATGCCTTCTTTTTTGG+AGG | + | chr4_3:39725294-39725313 | Msa0640600:intron | 35.0% |
GCAGTTTGAACATACTTTAG+AGG | - | chr4_3:39725513-39725532 | None:intergenic | 35.0% | |
AAAATGCCTAACAGAACTGT+GGG | - | chr4_3:39725537-39725556 | None:intergenic | 35.0% | |
AAAAATGCCTAACAGAACTG+TGG | - | chr4_3:39725538-39725557 | None:intergenic | 35.0% | |
! | GTTCTGTTAGGCATTTTTGT+TGG | + | chr4_3:39725540-39725559 | Msa0640600:CDS | 35.0% |
GTCTTAAGGCGAACTAAAAT+AGG | + | chr4_3:39725785-39725804 | Msa0640600:CDS | 35.0% | |
TCTACAACATTTCTACTTGC+AGG | + | chr4_3:39725906-39725925 | Msa0640600:intron | 35.0% | |
! | AGTCTTGCTCTTTTATATCC+AGG | - | chr4_3:39725951-39725970 | None:intergenic | 35.0% |
! | ACTGCACTTTACCACATTTT+AGG | - | chr4_3:39726042-39726061 | None:intergenic | 35.0% |
ATCCTGTAAATTGAGCACAA+AGG | - | chr4_3:39726283-39726302 | None:intergenic | 35.0% | |
TACTTCCTCTTTGAATTGAC+GGG | + | chr4_3:39726311-39726330 | Msa0640600:intron | 35.0% | |
!! | GAATTTGCTTTCTCTTTTGC+AGG | + | chr4_3:39726820-39726839 | Msa0640600:intron | 35.0% |
CAAAATACAATAGCGATGCA+TGG | - | chr4_3:39727001-39727020 | None:intergenic | 35.0% | |
TCTAAATGAATTCACCAGCA+AGG | - | chr4_3:39727077-39727096 | None:intergenic | 35.0% | |
! | TTTAGAATCCAACATTGGTG+TGG | + | chr4_3:39727091-39727110 | Msa0640600:intron | 35.0% |
ACTAATTTCCACACCAATGT+TGG | - | chr4_3:39727102-39727121 | None:intergenic | 35.0% | |
CATTTGACCATATTTCAGAC+GGG | - | chr4_3:39727307-39727326 | None:intergenic | 35.0% | |
GCATTTGACCATATTTCAGA+CGG | - | chr4_3:39727308-39727327 | None:intergenic | 35.0% | |
! | CATCTCTGGCTTAAATATAC+AGG | + | chr4_3:39727427-39727446 | Msa0640600:intron | 35.0% |
GGAGAATACACTACAAGATA+TGG | - | chr4_3:39727464-39727483 | None:intergenic | 35.0% | |
!! | TTGTGAGCATACTTTTTGCA+AGG | + | chr4_3:39727709-39727728 | Msa0640600:CDS | 35.0% |
!! | TGTGAGCATACTTTTTGCAA+GGG | + | chr4_3:39727710-39727729 | Msa0640600:CDS | 35.0% |
ATAGATTTCTCTGCTTCCTT+AGG | + | chr4_3:39727740-39727759 | Msa0640600:CDS | 35.0% | |
! | TGAGTAATTTAGAGCATGAG+GGG | - | chr4_3:39727778-39727797 | None:intergenic | 35.0% |
! | GTGAGTAATTTAGAGCATGA+GGG | - | chr4_3:39727779-39727798 | None:intergenic | 35.0% |
! | AGTGAGTAATTTAGAGCATG+AGG | - | chr4_3:39727780-39727799 | None:intergenic | 35.0% |
!! | TGTTGATTTGACTTCCAACA+AGG | + | chr4_3:39727799-39727818 | Msa0640600:CDS | 35.0% |
TCAGACGAGTACTAAAATAG+AGG | + | chr4_3:39727901-39727920 | Msa0640600:CDS | 35.0% | |
! | GAGTACTAAAATAGAGGCAT+TGG | + | chr4_3:39727907-39727926 | Msa0640600:CDS | 35.0% |
TAGAACTATTCATACTTGCC+AGG | - | chr4_3:39727984-39728003 | None:intergenic | 35.0% | |
AATTGCATCTTGCAGGTAAA+AGG | - | chr4_3:39728027-39728046 | None:intergenic | 35.0% | |
CTATGTGACTAAGTAAGGTT+TGG | + | chr4_3:39728126-39728145 | Msa0640600:intron | 35.0% | |
ATGTGACTAAGTAAGGTTTG+GGG | + | chr4_3:39728128-39728147 | Msa0640600:intron | 35.0% | |
AGATTTATGGTTGAAAGGGA+TGG | + | chr4_3:39728337-39728356 | Msa0640600:CDS | 35.0% | |
CAAGTAAATTTACCTTCTGC+AGG | - | chr4_3:39728423-39728442 | None:intergenic | 35.0% | |
! | AAGTTGAGTTGTGAAAGATC+TGG | + | chr4_3:39728717-39728736 | Msa0640600:intron | 35.0% |
TATGTTCTACTAGTCGCATT+TGG | + | chr4_3:39728743-39728762 | Msa0640600:intron | 35.0% | |
CATATGATGAGCTCAGAAAA+TGG | - | chr4_3:39728787-39728806 | None:intergenic | 35.0% | |
CAGGATGGGAGTTTAATTAT+TGG | + | chr4_3:39728822-39728841 | Msa0640600:intron | 35.0% | |
AGTCTGTTTGGATCAAACAT+TGG | - | chr4_3:39729087-39729106 | None:intergenic | 35.0% | |
ACTGTCACAATCTACATCAA+AGG | - | chr4_3:39729257-39729276 | None:intergenic | 35.0% | |
TGTCATTGAAAACACAATCG+AGG | + | chr4_3:39729577-39729596 | Msa0640600:CDS | 35.0% | |
CTTGAAACTTCAAGAGAAGA+AGG | + | chr4_3:39729607-39729626 | Msa0640600:CDS | 35.0% | |
AAGAAGGAACTGGTATTTGA+AGG | + | chr4_3:39729623-39729642 | Msa0640600:CDS | 35.0% | |
AGAAGGAACTGGTATTTGAA+GGG | + | chr4_3:39729624-39729643 | Msa0640600:CDS | 35.0% | |
TATTAAAGGAGGGACAACAA+AGG | - | chr4_3:39729716-39729735 | None:intergenic | 35.0% | |
! | TTTGTTGTCCCTCCTTTAAT+AGG | + | chr4_3:39729715-39729734 | Msa0640600:intron | 35.0% |
! | AATTTTCCAGTTACCCTATC+AGG | - | chr4_3:39729818-39729837 | None:intergenic | 35.0% |
!!! | CTGTTGTTTTATGAATCGGC+GGG | - | chr4_3:39721690-39721709 | None:intergenic | 40.0% |
!!! | TGAGGAACGGTTTTTGAGAT+GGG | - | chr4_3:39721755-39721774 | None:intergenic | 40.0% |
!! | ATGAGGAACGGTTTTTGAGA+TGG | - | chr4_3:39721756-39721775 | None:intergenic | 40.0% |
CTGAATTGTGATAGTAAGGG+TGG | + | chr4_3:39722077-39722096 | Msa0640600:intron | 40.0% | |
!! | TAATTGCATGTGTCGGTTGT+CGG | - | chr4_3:39722216-39722235 | None:intergenic | 40.0% |
GTGCTTCATAGGTTCGATTT+GGG | + | chr4_3:39722571-39722590 | Msa0640600:intron | 40.0% | |
! | TGCTTCATAGGTTCGATTTG+GGG | + | chr4_3:39722572-39722591 | Msa0640600:intron | 40.0% |
GATGAATTAGCGGCTGATAA+GGG | + | chr4_3:39722707-39722726 | Msa0640600:intron | 40.0% | |
ATGAATTAGCGGCTGATAAG+GGG | + | chr4_3:39722708-39722727 | Msa0640600:intron | 40.0% | |
GGTCTTGATTCAAGTCAAAG+GGG | - | chr4_3:39723191-39723210 | None:intergenic | 40.0% | |
GGGTCTTGATTCAAGTCAAA+GGG | - | chr4_3:39723192-39723211 | None:intergenic | 40.0% | |
AGGGTCTTGATTCAAGTCAA+AGG | - | chr4_3:39723193-39723212 | None:intergenic | 40.0% | |
CTGATTCATCTGACTTTAGC+GGG | + | chr4_3:39723253-39723272 | Msa0640600:CDS | 40.0% | |
GTCTTTCTCCGTTTAGATGA+AGG | - | chr4_3:39723279-39723298 | None:intergenic | 40.0% | |
CATCTAAACGGAGAAAGACA+CGG | + | chr4_3:39723280-39723299 | Msa0640600:CDS | 40.0% | |
GGATTTACTACCTCTCTTTC+TGG | - | chr4_3:39723307-39723326 | None:intergenic | 40.0% | |
CAGGTCTGTAGATTCTATCT+TGG | - | chr4_3:39723328-39723347 | None:intergenic | 40.0% | |
ATAGAATCTACAGACCTGAG+TGG | + | chr4_3:39723330-39723349 | Msa0640600:CDS | 40.0% | |
ATTTCCAATGGTTGCTGAAG+AGG | + | chr4_3:39723422-39723441 | Msa0640600:CDS | 40.0% | |
! | TTTTTCTTCCTTGGCAGCTT+AGG | - | chr4_3:39723468-39723487 | None:intergenic | 40.0% |
!! | TGCCATAACAACACTGGTTT+AGG | - | chr4_3:39723516-39723535 | None:intergenic | 40.0% |
GGAAACATGAACATGAGAAG+TGG | + | chr4_3:39723541-39723560 | Msa0640600:CDS | 40.0% | |
GTGGATCGATCAGAATTTGT+TGG | + | chr4_3:39723560-39723579 | Msa0640600:CDS | 40.0% | |
GAGTGAAGTGATGAATGAGA+CGG | + | chr4_3:39723602-39723621 | Msa0640600:CDS | 40.0% | |
TGGAATCCTTGCTGATGAAA+TGG | + | chr4_3:39723719-39723738 | Msa0640600:CDS | 40.0% | |
GGAATCCTTGCTGATGAAAT+GGG | + | chr4_3:39723720-39723739 | Msa0640600:CDS | 40.0% | |
CTTGCTGATGAAATGGGTAT+GGG | + | chr4_3:39723726-39723745 | Msa0640600:CDS | 40.0% | |
TTGCTGATGAAATGGGTATG+GGG | + | chr4_3:39723727-39723746 | Msa0640600:CDS | 40.0% | |
AAAGTCCTTCCTGTGATCAA+AGG | + | chr4_3:39723846-39723865 | Msa0640600:CDS | 40.0% | |
ACAAGAGTTCCTTTGATCAC+AGG | - | chr4_3:39723858-39723877 | None:intergenic | 40.0% | |
! | TACTTTGAAAGGTAGCACGA+AGG | + | chr4_3:39723929-39723948 | Msa0640600:CDS | 40.0% |
!! | ACGAAGGTTCTGGTTTATCA+TGG | + | chr4_3:39723945-39723964 | Msa0640600:CDS | 40.0% |
!! | CGAAGGTTCTGGTTTATCAT+GGG | + | chr4_3:39723946-39723965 | Msa0640600:CDS | 40.0% |
TTTATCATGGGCCAAAGAGA+TGG | + | chr4_3:39723958-39723977 | Msa0640600:CDS | 40.0% | |
! | TATTGGCACTTTTCCTTAGG+AGG | - | chr4_3:39724068-39724087 | None:intergenic | 40.0% |
TGGTGAAAAACTAAACTGGG+CGG | - | chr4_3:39724110-39724129 | None:intergenic | 40.0% | |
!! | TTTGTTGTTCTGATAGCGTC+AGG | - | chr4_3:39724149-39724168 | None:intergenic | 40.0% |
AAGAGGTCAGAGTTCAAAGT+TGG | + | chr4_3:39724196-39724215 | Msa0640600:CDS | 40.0% | |
TTCAAAGTTGGATGGAGAGT+TGG | + | chr4_3:39724208-39724227 | Msa0640600:CDS | 40.0% | |
GAAGTGGCAAAGGATCATAT+TGG | + | chr4_3:39724298-39724317 | Msa0640600:CDS | 40.0% | |
GCAAAGGATCATATTGGATG+AGG | + | chr4_3:39724304-39724323 | Msa0640600:CDS | 40.0% | |
AACACTTCCTAAAAGCTGCT+AGG | + | chr4_3:39724880-39724899 | Msa0640600:intron | 40.0% | |
CTTGCACAGGTTATAGGAAT+AGG | - | chr4_3:39725002-39725021 | None:intergenic | 40.0% | |
CTATTCCTATAACCTGTGCA+AGG | + | chr4_3:39725000-39725019 | Msa0640600:CDS | 40.0% | |
ATTGCAGGACACTTGATCAT+AGG | + | chr4_3:39725029-39725048 | Msa0640600:CDS | 40.0% | |
AGGACACTTGATCATAGGTA+TGG | + | chr4_3:39725034-39725053 | Msa0640600:intron | 40.0% | |
!! | GCAGGCAGTGATTTTAATCA+AGG | + | chr4_3:39725100-39725119 | Msa0640600:intron | 40.0% |
AGAGTAAACACTTCGGTAGA+CGG | - | chr4_3:39725376-39725395 | None:intergenic | 40.0% | |
! | CTGTTAGGCATTTTTGTTGG+TGG | + | chr4_3:39725543-39725562 | Msa0640600:CDS | 40.0% |
!! | GCATTTTTGTTGGTGGAACA+AGG | + | chr4_3:39725550-39725569 | Msa0640600:CDS | 40.0% |
GAACAAGGTAAGTTCCTTGT+TGG | + | chr4_3:39725565-39725584 | Msa0640600:intron | 40.0% | |
AAGGTAAGTTCCTTGTTGGT+TGG | + | chr4_3:39725569-39725588 | Msa0640600:intron | 40.0% | |
! | AGGTAAGTTCCTTGTTGGTT+GGG | + | chr4_3:39725570-39725589 | Msa0640600:intron | 40.0% |
CCATATCCGGATGATTGAAT+TGG | - | chr4_3:39725710-39725729 | None:intergenic | 40.0% | |
CCAATTCAATCATCCGGATA+TGG | + | chr4_3:39725707-39725726 | Msa0640600:CDS | 40.0% | |
TTTCCCATCATCACCATATC+CGG | - | chr4_3:39725723-39725742 | None:intergenic | 40.0% | |
TAAGGCGAACTAAAATAGGC+AGG | + | chr4_3:39725789-39725808 | Msa0640600:CDS | 40.0% | |
AAGGCGAACTAAAATAGGCA+GGG | + | chr4_3:39725790-39725809 | Msa0640600:CDS | 40.0% | |
AAACAAGAACTCACGATCCT+AGG | - | chr4_3:39725836-39725855 | None:intergenic | 40.0% | |
TCTACTTGCAGGTTTCATTG+AGG | + | chr4_3:39725917-39725936 | Msa0640600:intron | 40.0% | |
ATTTAGTGGGGTTGGATTTG+TGG | + | chr4_3:39726112-39726131 | Msa0640600:intron | 40.0% | |
TAATCACCAAACTGTCAGTG+AGG | + | chr4_3:39726138-39726157 | Msa0640600:intron | 40.0% | |
AATCACCAAACTGTCAGTGA+GGG | + | chr4_3:39726139-39726158 | Msa0640600:intron | 40.0% | |
CACAAAGGCTCTACAATGAA+AGG | - | chr4_3:39726268-39726287 | None:intergenic | 40.0% | |
AGCCTTTGTGCTCAATTTAC+AGG | + | chr4_3:39726278-39726297 | Msa0640600:intron | 40.0% | |
ACTTCCTCTTTGAATTGACG+GGG | + | chr4_3:39726312-39726331 | Msa0640600:intron | 40.0% | |
ACTCAAGTCAAGCGTTAAAC+TGG | + | chr4_3:39726623-39726642 | Msa0640600:intron | 40.0% | |
ACTACGTCAGGTGAATGATA+AGG | + | chr4_3:39726902-39726921 | Msa0640600:intron | 40.0% | |
CTACGTCAGGTGAATGATAA+GGG | + | chr4_3:39726903-39726922 | Msa0640600:intron | 40.0% | |
GTTTGTGTAAGCTGAAGTTC+AGG | - | chr4_3:39727144-39727163 | None:intergenic | 40.0% | |
!! | ATAAATCGGAAAGGCACCAT+AGG | + | chr4_3:39727246-39727265 | Msa0640600:intron | 40.0% |
! | TGTTTGTACTCTTTTGCCTC+TGG | + | chr4_3:39727370-39727389 | Msa0640600:intron | 40.0% |
AAATCACATACACCTTCCAG+AGG | - | chr4_3:39727389-39727408 | None:intergenic | 40.0% | |
TAAGCCAGAGATGTGTAAGA+CGG | - | chr4_3:39727420-39727439 | None:intergenic | 40.0% | |
TGGCTTAAATATACAGGCTG+TGG | + | chr4_3:39727433-39727452 | Msa0640600:intron | 40.0% | |
GGTGATGTTGAACAAGAATG+TGG | + | chr4_3:39727524-39727543 | Msa0640600:CDS | 40.0% | |
TGATACTGTTGAAGATCCAG+TGG | + | chr4_3:39727556-39727575 | Msa0640600:CDS | 40.0% | |
TGCTGCTATGTGACTAAGTA+AGG | + | chr4_3:39728121-39728140 | Msa0640600:intron | 40.0% | |
TGTGACTAAGTAAGGTTTGG+GGG | + | chr4_3:39728129-39728148 | Msa0640600:intron | 40.0% | |
TAGCCAGTTCACATCATTCT+TGG | + | chr4_3:39728381-39728400 | Msa0640600:CDS | 40.0% | |
GATCCAAGAATGATGTGAAC+TGG | - | chr4_3:39728387-39728406 | None:intergenic | 40.0% | |
AGGTGTATCTTGCGTTCAAT+TGG | + | chr4_3:39728505-39728524 | Msa0640600:CDS | 40.0% | |
GTATCTTGCGTTCAATTGGT+TGG | + | chr4_3:39728509-39728528 | Msa0640600:CDS | 40.0% | |
! | GAAGTATGACATTGACTGCT+CGG | + | chr4_3:39728531-39728550 | Msa0640600:CDS | 40.0% |
! | AAGTATGACATTGACTGCTC+GGG | + | chr4_3:39728532-39728551 | Msa0640600:CDS | 40.0% |
TTTCTCATGAGCTTGAAAGC+CGG | + | chr4_3:39728599-39728618 | Msa0640600:CDS | 40.0% | |
TAAGCGGAAAAACTAGCTGA+TGG | + | chr4_3:39728902-39728921 | Msa0640600:intron | 40.0% | |
CGAGACATGTAGGCATTAAA+TGG | + | chr4_3:39729182-39729201 | Msa0640600:intron | 40.0% | |
AGAGAAACCCAACTTACGAA+TGG | - | chr4_3:39729310-39729329 | None:intergenic | 40.0% | |
! | TAAGTTGGGTTTCTCTCACA+TGG | + | chr4_3:39729314-39729333 | Msa0640600:intron | 40.0% |
ACCTGAGATTGTGCAATGAA+CGG | - | chr4_3:39729353-39729372 | None:intergenic | 40.0% | |
! | ACAATCTCAGGTTTTCCTCA+TGG | + | chr4_3:39729361-39729380 | Msa0640600:intron | 40.0% |
AAGACAGAATTCACCGGATA+GGG | + | chr4_3:39729420-39729439 | Msa0640600:CDS | 40.0% | |
TTGAAAACACAATCGAGGAG+AGG | + | chr4_3:39729582-39729601 | Msa0640600:CDS | 40.0% | |
ACTTCAAGAGAAGAAGGAAC+TGG | + | chr4_3:39729613-39729632 | Msa0640600:CDS | 40.0% | |
CCTACAGTCCTATTAAAGGA+GGG | - | chr4_3:39729726-39729745 | None:intergenic | 40.0% | |
TCCTTTAATAGGACTGTAGG+CGG | + | chr4_3:39729726-39729745 | Msa0640600:intron | 40.0% | |
! | TTACTTAAGCTGGCCTGATA+GGG | + | chr4_3:39729802-39729821 | Msa0640600:exon | 40.0% |
CGTTAACTGCTCATAGATAC+TGG | - | chr4_3:39729915-39729934 | None:intergenic | 40.0% | |
ACAGCGAAGTGATGTATGTT+AGG | + | chr4_3:39730121-39730140 | Msa0640600:three_prime_UTR | 40.0% | |
! | CGCATTTATAGGCGTCGTTA+TGG | - | chr4_3:39721661-39721680 | None:intergenic | 45.0% |
GAGATGGGATGAGACGAAAA+TGG | - | chr4_3:39721740-39721759 | None:intergenic | 45.0% | |
! | AGGGTTTTGCGAATGAGGAA+CGG | - | chr4_3:39721768-39721787 | None:intergenic | 45.0% |
TTCTTCGTTCGCTTCGTCAA+TGG | + | chr4_3:39721810-39721829 | Msa0640600:exon | 45.0% | |
! | GCTTCCGATGAAATCGATTC+TGG | + | chr4_3:39721856-39721875 | Msa0640600:CDS | 45.0% |
ATTGTCCGTGTTCGACATGT+TGG | + | chr4_3:39722314-39722333 | Msa0640600:intron | 45.0% | |
AGACACCAACATGTCGAACA+CGG | - | chr4_3:39722322-39722341 | None:intergenic | 45.0% | |
GTCTCCTGTGTCTGTGTAAT+CGG | + | chr4_3:39722338-39722357 | Msa0640600:intron | 45.0% | |
GTGCTTCGTAGGTTCGATTT+GGG | + | chr4_3:39722360-39722379 | Msa0640600:intron | 45.0% | |
! | TGCTTCGTAGGTTCGATTTG+GGG | + | chr4_3:39722361-39722380 | Msa0640600:intron | 45.0% |
CTTCTAATCGAAGCTGTGTC+CGG | + | chr4_3:39722451-39722470 | Msa0640600:intron | 45.0% | |
TTGCATACTGACACAGACAC+CGG | - | chr4_3:39722473-39722492 | None:intergenic | 45.0% | |
GGTGTCAGTGTCTTTGTAGT+CGG | + | chr4_3:39722549-39722568 | Msa0640600:intron | 45.0% | |
! | CTTTGTAGTCGGTGCTTCAT+AGG | + | chr4_3:39722560-39722579 | Msa0640600:intron | 45.0% |
GGTGCTTCATAGGTTCGATT+TGG | + | chr4_3:39722570-39722589 | Msa0640600:intron | 45.0% | |
GGATGAATTAGCGGCTGATA+AGG | + | chr4_3:39722706-39722725 | Msa0640600:intron | 45.0% | |
AATGCAGCTGAAGACATTGG+TGG | + | chr4_3:39723159-39723178 | Msa0640600:intron | 45.0% | |
! | TTAGCGGGCCTTCATCTAAA+CGG | + | chr4_3:39723268-39723287 | Msa0640600:CDS | 45.0% |
TACCTTTACCTAAGCTGCCA+AGG | + | chr4_3:39723457-39723476 | Msa0640600:CDS | 45.0% | |
TTCCTTGGCAGCTTAGGTAA+AGG | - | chr4_3:39723462-39723481 | None:intergenic | 45.0% | |
CAAGCATGCCATAACAACAC+TGG | - | chr4_3:39723522-39723541 | None:intergenic | 45.0% | |
! | CAGTGTTGTTATGGCATGCT+TGG | + | chr4_3:39723520-39723539 | Msa0640600:CDS | 45.0% |
CATCACTTCACTCTGATCGA+GGG | - | chr4_3:39723595-39723614 | None:intergenic | 45.0% | |
TCATCACTTCACTCTGATCG+AGG | - | chr4_3:39723596-39723615 | None:intergenic | 45.0% | |
AATCAGATCTGACGATGCCT+CGG | - | chr4_3:39723628-39723647 | None:intergenic | 45.0% | |
ATCTGATTGTTCCGTTGCTG+AGG | + | chr4_3:39723640-39723659 | Msa0640600:intron | 45.0% | |
ACCAAAGGGAATGGTTAGCA+TGG | + | chr4_3:39723664-39723683 | Msa0640600:CDS | 45.0% | |
CCAAAGGGAATGGTTAGCAT+GGG | + | chr4_3:39723665-39723684 | Msa0640600:CDS | 45.0% | |
!! | CAGGAGCATTCTGTAACTAG+AGG | + | chr4_3:39723696-39723715 | Msa0640600:CDS | 45.0% |
GAGCATTCTGTAACTAGAGG+TGG | + | chr4_3:39723699-39723718 | Msa0640600:CDS | 45.0% | |
CCATACCCATTTCATCAGCA+AGG | - | chr4_3:39723728-39723747 | None:intergenic | 45.0% | |
CCTTGCTGATGAAATGGGTA+TGG | + | chr4_3:39723725-39723744 | Msa0640600:CDS | 45.0% | |
TTGCCCTTGTCCTTGCTAAA+CGG | + | chr4_3:39723766-39723785 | Msa0640600:CDS | 45.0% | |
TTCCCGTTTAGCAAGGACAA+GGG | - | chr4_3:39723772-39723791 | None:intergenic | 45.0% | |
ATTCCCGTTTAGCAAGGACA+AGG | - | chr4_3:39723773-39723792 | None:intergenic | 45.0% | |
GTTGCAATTCCCGTTTAGCA+AGG | - | chr4_3:39723779-39723798 | None:intergenic | 45.0% | |
GGCGAATCTGAGTGTTCAAA+TGG | - | chr4_3:39723816-39723835 | None:intergenic | 45.0% | |
TTTGAACACTCAGATTCGCC+CGG | + | chr4_3:39723816-39723835 | Msa0640600:CDS | 45.0% | |
! | AGGAAGGACTTTAGAAGACC+CGG | - | chr4_3:39723838-39723857 | None:intergenic | 45.0% |
GAGTTCCTTTGATCACAGGA+AGG | - | chr4_3:39723854-39723873 | None:intergenic | 45.0% | |
TCAGCACTCTTCCATCTCTT+TGG | - | chr4_3:39723972-39723991 | None:intergenic | 45.0% | |
!! | GAAGAGTGCTGACAAGTTCT+CGG | + | chr4_3:39723980-39723999 | Msa0640600:CDS | 45.0% |
AAAGCATGTGATGCCTCCTA+AGG | + | chr4_3:39724052-39724071 | Msa0640600:CDS | 45.0% | |
GGTGAAAAACTAAACTGGGC+GGG | - | chr4_3:39724109-39724128 | None:intergenic | 45.0% | |
GGTCAGAGTTCAAAGTTGGA+TGG | + | chr4_3:39724200-39724219 | Msa0640600:CDS | 45.0% | |
TTGGATGGAGAGTTGGAACA+GGG | + | chr4_3:39724215-39724234 | Msa0640600:CDS | 45.0% | |
CATTTCTCCATGCTGTGAAG+TGG | + | chr4_3:39724282-39724301 | Msa0640600:CDS | 45.0% | |
! | TCTCCAACACGATTCTGAAG+GGG | - | chr4_3:39724785-39724804 | None:intergenic | 45.0% |
CTCTCCAACACGATTCTGAA+GGG | - | chr4_3:39724786-39724805 | None:intergenic | 45.0% | |
TCCTAAAAGCTGCTAGGTGA+AGG | + | chr4_3:39724886-39724905 | Msa0640600:intron | 45.0% | |
! | TCCTTCACCTAGCAGCTTTT+AGG | - | chr4_3:39724890-39724909 | None:intergenic | 45.0% |
AAGCTGCTAGGTGAAGGATA+AGG | + | chr4_3:39724892-39724911 | Msa0640600:intron | 45.0% | |
ACAGTCCTTGCACAGGTTAT+AGG | - | chr4_3:39725008-39725027 | None:intergenic | 45.0% | |
TATGGAGAACCCAACCAACA+AGG | - | chr4_3:39725582-39725601 | None:intergenic | 45.0% | |
GCCACACCAATTCAATCATC+CGG | + | chr4_3:39725701-39725720 | Msa0640600:CDS | 45.0% | |
TCCGGATGATTGAATTGGTG+TGG | - | chr4_3:39725705-39725724 | None:intergenic | 45.0% | |
! | TCATCCGGATATGGTGATGA+TGG | + | chr4_3:39725716-39725735 | Msa0640600:CDS | 45.0% |
! | CATCCGGATATGGTGATGAT+GGG | + | chr4_3:39725717-39725736 | Msa0640600:CDS | 45.0% |
ACTTGCAGGTTTCATTGAGG+AGG | + | chr4_3:39725920-39725939 | Msa0640600:intron | 45.0% | |
CTTGCAGGTTTCATTGAGGA+GGG | + | chr4_3:39725921-39725940 | Msa0640600:intron | 45.0% | |
ATCACCAAACTGTCAGTGAG+GGG | + | chr4_3:39726140-39726159 | Msa0640600:intron | 45.0% | |
TATTCCCCTCACTGACAGTT+TGG | - | chr4_3:39726147-39726166 | None:intergenic | 45.0% | |
TGTCAGTGAGGGGAATATCA+GGG | + | chr4_3:39726150-39726169 | Msa0640600:intron | 45.0% | |
!! | GGTTAGGAGAGTATTCTCTC+TGG | + | chr4_3:39726218-39726237 | Msa0640600:intron | 45.0% |
TAGACCCCGTCAATTCAAAG+AGG | - | chr4_3:39726319-39726338 | None:intergenic | 45.0% | |
! | CATGCAAGGCTTTGTCTTGT+TGG | - | chr4_3:39726772-39726791 | None:intergenic | 45.0% |
! | TCTCTTTTGCAGGTATGTCG+AGG | + | chr4_3:39726830-39726849 | Msa0640600:intron | 45.0% |
! | TGTACTCTTTTGCCTCTGGA+AGG | + | chr4_3:39727374-39727393 | Msa0640600:intron | 45.0% |
AGCACTAAAAGGTGGGAACT+TGG | + | chr4_3:39727493-39727512 | Msa0640600:CDS | 45.0% | |
GTGACTAAGTAAGGTTTGGG+GGG | + | chr4_3:39728130-39728149 | Msa0640600:intron | 45.0% | |
TGACTAAGTAAGGTTTGGGG+GGG | + | chr4_3:39728131-39728150 | Msa0640600:intron | 45.0% | |
! | TGAAAGGGATGGTTCTGCAA+AGG | + | chr4_3:39728348-39728367 | Msa0640600:CDS | 45.0% |
ATGGTGAGCTAATTGCAGTC+AGG | + | chr4_3:39728485-39728504 | Msa0640600:intron | 45.0% | |
TGAGATTGTGCAATGAACGG+AGG | - | chr4_3:39729350-39729369 | None:intergenic | 45.0% | |
TCCGTTCATTGCACAATCTC+AGG | + | chr4_3:39729349-39729368 | Msa0640600:intron | 45.0% | |
! | AGGTTTTCCTCATGGATCCT+TGG | + | chr4_3:39729369-39729388 | Msa0640600:intron | 45.0% |
! | TTTTCCTCATGGATCCTTGG+TGG | + | chr4_3:39729372-39729391 | Msa0640600:CDS | 45.0% |
AGGCTCAAGACAGAATTCAC+CGG | + | chr4_3:39729414-39729433 | Msa0640600:CDS | 45.0% | |
CAAGACAGAATTCACCGGAT+AGG | + | chr4_3:39729419-39729438 | Msa0640600:CDS | 45.0% | |
!! | TTGGTTTGTACTGCCCTATC+CGG | - | chr4_3:39729436-39729455 | None:intergenic | 45.0% |
TAGGGCAGTACAAACCAATC+AGG | + | chr4_3:39729438-39729457 | Msa0640600:CDS | 45.0% | |
CCCTCCTTTAATAGGACTGT+AGG | + | chr4_3:39729723-39729742 | Msa0640600:intron | 45.0% | |
GCCTACAGTCCTATTAAAGG+AGG | - | chr4_3:39729727-39729746 | None:intergenic | 45.0% | |
ACCGCCTACAGTCCTATTAA+AGG | - | chr4_3:39729730-39729749 | None:intergenic | 45.0% | |
! | GTTACTTAAGCTGGCCTGAT+AGG | + | chr4_3:39729801-39729820 | Msa0640600:exon | 45.0% |
!! | TTTATTAATAAATGAAAATA+AGG | + | chr4_3:39728454-39728473 | Msa0640600:intron | 5.0% |
!! | AAAAATTAAAATTAAGTATT+TGG | - | chr4_3:39730070-39730089 | None:intergenic | 5.0% |
!!! | ACTTAATTTTAATTTTTTTT+TGG | + | chr4_3:39730073-39730092 | Msa0640600:three_prime_UTR | 5.0% |
GCGGGAAGAGACGCATTTAT+AGG | - | chr4_3:39721672-39721691 | None:intergenic | 50.0% | |
!! | AGCACCGATTACACAGACAC+AGG | - | chr4_3:39722345-39722364 | None:intergenic | 50.0% |
! | CTGTGTAATCGGTGCTTCGT+AGG | + | chr4_3:39722349-39722368 | Msa0640600:intron | 50.0% |
GGTGCTTCGTAGGTTCGATT+TGG | + | chr4_3:39722359-39722378 | Msa0640600:intron | 50.0% | |
CTGACACACTAACACGACAC+CGG | - | chr4_3:39722530-39722549 | None:intergenic | 50.0% | |
AAGACACGGTCCAGAAAGAG+AGG | + | chr4_3:39723294-39723313 | Msa0640600:CDS | 50.0% | |
! | TTCCGTTGCTGAGGTACCAA+AGG | + | chr4_3:39723649-39723668 | Msa0640600:intron | 50.0% |
! | TCCGTTGCTGAGGTACCAAA+GGG | + | chr4_3:39723650-39723669 | Msa0640600:intron | 50.0% |
TCCCTTTGGTACCTCAGCAA+CGG | - | chr4_3:39723654-39723673 | None:intergenic | 50.0% | |
! | TGCTGAGGTACCAAAGGGAA+TGG | + | chr4_3:39723655-39723674 | Msa0640600:intron | 50.0% |
CCCATGCTAACCATTCCCTT+TGG | - | chr4_3:39723668-39723687 | None:intergenic | 50.0% | |
!! | GTTAGCATGGGCTTTGAAGC+AGG | + | chr4_3:39723677-39723696 | Msa0640600:CDS | 50.0% |
TGCCCTTGTCCTTGCTAAAC+GGG | + | chr4_3:39723767-39723786 | Msa0640600:CDS | 50.0% | |
TTGAACACTCAGATTCGCCC+GGG | + | chr4_3:39723817-39723836 | Msa0640600:CDS | 50.0% | |
! | GGAAGGACTTTAGAAGACCC+GGG | - | chr4_3:39723837-39723856 | None:intergenic | 50.0% |
AACTCTTGTCATCTGTCCCG+TGG | + | chr4_3:39723869-39723888 | Msa0640600:CDS | 50.0% | |
CATTGAGTGACAGCAACCAC+GGG | - | chr4_3:39723888-39723907 | None:intergenic | 50.0% | |
CCATTGAGTGACAGCAACCA+CGG | - | chr4_3:39723889-39723908 | None:intergenic | 50.0% | |
CGTGGTTGCTGTCACTCAAT+GGG | + | chr4_3:39723887-39723906 | Msa0640600:CDS | 50.0% | |
GAAAGGTAGCACGAAGGTTC+TGG | + | chr4_3:39723935-39723954 | Msa0640600:CDS | 50.0% | |
CAGGCCCACAATAGTACTTC+TGG | - | chr4_3:39724130-39724149 | None:intergenic | 50.0% | |
GTTGGATGGAGAGTTGGAAC+AGG | + | chr4_3:39724214-39724233 | Msa0640600:CDS | 50.0% | |
TCCATGCTGTGAAGTGGCAA+AGG | + | chr4_3:39724288-39724307 | Msa0640600:CDS | 50.0% | |
! | TCCTTTGCCACTTCACAGCA+TGG | - | chr4_3:39724292-39724311 | None:intergenic | 50.0% |
ACACCCCTTCAGAATCGTGT+TGG | + | chr4_3:39724779-39724798 | Msa0640600:CDS | 50.0% | |
GCTCTCCAACACGATTCTGA+AGG | - | chr4_3:39724787-39724806 | None:intergenic | 50.0% | |
TGCAATCACAGTCCTTGCAC+AGG | - | chr4_3:39725015-39725034 | None:intergenic | 50.0% | |
TGTGCAAGGACTGTGATTGC+AGG | + | chr4_3:39725014-39725033 | Msa0640600:CDS | 50.0% | |
ACTGCTCCCACAGTTCTGTT+AGG | + | chr4_3:39725528-39725547 | Msa0640600:CDS | 50.0% | |
CAAGAACTCACGATCCTAGG+CGG | - | chr4_3:39725833-39725852 | None:intergenic | 50.0% | |
TTCATTGAGGAGGGATAGCC+TGG | + | chr4_3:39725930-39725949 | Msa0640600:CDS | 50.0% | |
CTGTCAGTGAGGGGAATATC+AGG | + | chr4_3:39726149-39726168 | Msa0640600:intron | 50.0% | |
AGGGGAATATCAGGGTAGCA+AGG | + | chr4_3:39726158-39726177 | Msa0640600:intron | 50.0% | |
GGGGAATATCAGGGTAGCAA+GGG | + | chr4_3:39726159-39726178 | Msa0640600:intron | 50.0% | |
GGGAATATCAGGGTAGCAAG+GGG | + | chr4_3:39726160-39726179 | Msa0640600:intron | 50.0% | |
AATATCAGGGTAGCAAGGGG+AGG | + | chr4_3:39726163-39726182 | Msa0640600:intron | 50.0% | |
ATATCAGGGTAGCAAGGGGA+GGG | + | chr4_3:39726164-39726183 | Msa0640600:intron | 50.0% | |
CTCTGGTAGTAGCTTTCCTC+TGG | + | chr4_3:39726235-39726254 | Msa0640600:intron | 50.0% | |
CCATATTTCAGACGGGCACT+CGG | - | chr4_3:39727300-39727319 | None:intergenic | 50.0% | |
CCAGAGATGTGTAAGACGGA+GGG | - | chr4_3:39727416-39727435 | None:intergenic | 50.0% | |
!! | CCTTTTAGTGCTGCTGCAGT+TGG | - | chr4_3:39727485-39727504 | None:intergenic | 50.0% |
CCAACTGCAGCAGCACTAAA+AGG | + | chr4_3:39727482-39727501 | Msa0640600:CDS | 50.0% | |
ACTGCAGCAGCACTAAAAGG+TGG | + | chr4_3:39727485-39727504 | Msa0640600:CDS | 50.0% | |
CTGCAGCAGCACTAAAAGGT+GGG | + | chr4_3:39727486-39727505 | Msa0640600:CDS | 50.0% | |
CTAAAAGGTGGGAACTTGGC+TGG | + | chr4_3:39727497-39727516 | Msa0640600:CDS | 50.0% | |
GGGGCATGATACTTGTCCTA+AGG | - | chr4_3:39727759-39727778 | None:intergenic | 50.0% | |
ATCAACCACGGCATCCTTGT+TGG | - | chr4_3:39727816-39727835 | None:intergenic | 50.0% | |
CATCAACTACTCCCTGCAGA+AGG | + | chr4_3:39728408-39728427 | Msa0640600:CDS | 50.0% | |
CAAATTCAGAGCAACGCCTC+CGG | - | chr4_3:39728621-39728640 | None:intergenic | 50.0% | |
CACCATTGAGCGAGACATGT+AGG | + | chr4_3:39729172-39729191 | Msa0640600:intron | 50.0% | |
TGCCTACATGTCTCGCTCAA+TGG | - | chr4_3:39729177-39729196 | None:intergenic | 50.0% | |
!! | AGAGGCTCTAGGGAAGTTGA+CGG | + | chr4_3:39729755-39729774 | Msa0640600:CDS | 50.0% |
!! | CGGTGTCGTGTTAGTGTGTC+AGG | + | chr4_3:39722528-39722547 | Msa0640600:intron | 55.0% |
TGATAAGGGGAAGCAGCCGA+TGG | + | chr4_3:39722721-39722740 | Msa0640600:CDS | 55.0% | |
GGAGCCTCTTCAGCAACCAT+TGG | - | chr4_3:39723429-39723448 | None:intergenic | 55.0% | |
AGTGATGAATGAGACGGCCG+AGG | + | chr4_3:39723608-39723627 | Msa0640600:CDS | 55.0% | |
CCGTGGTTGCTGTCACTCAA+TGG | + | chr4_3:39723886-39723905 | Msa0640600:CDS | 55.0% | |
AGAGGAGCTGCACAAGAGCA+CGG | - | chr4_3:39725495-39725514 | None:intergenic | 55.0% | |
CTGATCTTGCACTTCCGCCT+AGG | + | chr4_3:39725816-39725835 | Msa0640600:CDS | 55.0% | |
GGGGAGGGAGGAAATCATTC+AGG | + | chr4_3:39726179-39726198 | Msa0640600:intron | 55.0% | |
TCACCTGACGTAGTCGTGTG+AGG | - | chr4_3:39726896-39726915 | None:intergenic | 55.0% | |
! | CCGAGTGCCCGTCTGAAATA+TGG | + | chr4_3:39727297-39727316 | Msa0640600:intron | 55.0% |
CCCTCCGTCTTACACATCTC+TGG | + | chr4_3:39727413-39727432 | Msa0640600:intron | 55.0% | |
GCCAGAGATGTGTAAGACGG+AGG | - | chr4_3:39727417-39727436 | None:intergenic | 55.0% | |
GGTGGGAACTTGGCTGGTAA+TGG | + | chr4_3:39727503-39727522 | Msa0640600:CDS | 55.0% | |
GACTTCCAACAAGGATGCCG+TGG | + | chr4_3:39727808-39727827 | Msa0640600:CDS | 55.0% | |
CTAAGTAAGGTTTGGGGGGG+CGG | + | chr4_3:39728134-39728153 | Msa0640600:intron | 55.0% | |
TAAGTAAGGTTTGGGGGGGC+GGG | + | chr4_3:39728135-39728154 | Msa0640600:intron | 55.0% | |
CTCATGAGCTTGAAAGCCGG+AGG | + | chr4_3:39728602-39728621 | Msa0640600:CDS | 55.0% | |
GGTTCCACCAAGGATCCATG+AGG | - | chr4_3:39729379-39729398 | None:intergenic | 55.0% | |
GACTGTAGGCGGTTCTTCAG+AGG | + | chr4_3:39729737-39729756 | Msa0640600:CDS | 55.0% | |
GCGGTTCTTCAGAGGCTCTA+GGG | + | chr4_3:39729745-39729764 | Msa0640600:CDS | 55.0% | |
! | AGCTGGCCTGATAGGGTAAC+TGG | + | chr4_3:39729809-39729828 | Msa0640600:exon | 55.0% |
TAAGGGGAAGCAGCCGATGG+AGG | + | chr4_3:39722724-39722743 | Msa0640600:CDS | 60.0% | |
GCGCTCTCTCTACACCACTC+AGG | - | chr4_3:39723347-39723366 | None:intergenic | 60.0% | |
! | GAGTGGTGTAGAGAGAGCGC+TGG | + | chr4_3:39723347-39723366 | Msa0640600:CDS | 60.0% |
GCGCTGGAGTTCGATCTGAG+TGG | + | chr4_3:39723363-39723382 | Msa0640600:CDS | 60.0% | |
!! | TGGTGTAGAGAGAGCGCTGC+TGG | + | chr4_3:39723383-39723402 | Msa0640600:intron | 60.0% |
CCTGACGTAGTCGTGTGAGG+AGG | - | chr4_3:39726893-39726912 | None:intergenic | 60.0% | |
CCTCCTCACACGACTACGTC+AGG | + | chr4_3:39726890-39726909 | Msa0640600:CDS | 60.0% | |
AAGTAAGGTTTGGGGGGGCG+GGG | + | chr4_3:39728136-39728155 | Msa0640600:intron | 60.0% | |
TCCTTGGTGGAACCCTGCTG+TGG | + | chr4_3:39729385-39729404 | Msa0640600:CDS | 60.0% | |
TCCACAGCAGGGTTCCACCA+AGG | - | chr4_3:39729389-39729408 | None:intergenic | 60.0% | |
GGCGGTTCTTCAGAGGCTCT+AGG | + | chr4_3:39729744-39729763 | Msa0640600:CDS | 60.0% | |
!! | GGCTCTAGGGAAGTTGACGG+TGG | + | chr4_3:39729758-39729777 | Msa0640600:CDS | 60.0% |
CCACATGAGCAGCGCCCAGA+CGG | - | chr4_3:39725262-39725281 | None:intergenic | 65.0% | |
TCAGGGTAGCAAGGGGAGGG+AGG | + | chr4_3:39726167-39726186 | Msa0640600:intron | 65.0% | |
! | GAACCCTGCTGTGGAGCGTC+AGG | + | chr4_3:39729394-39729413 | Msa0640600:CDS | 65.0% |
GAGCCTGACGCTCCACAGCA+GGG | - | chr4_3:39729400-39729419 | None:intergenic | 65.0% | |
TGAGCCTGACGCTCCACAGC+AGG | - | chr4_3:39729401-39729420 | None:intergenic | 65.0% | |
! | CCGTCTGGGCGCTGCTCATG+TGG | + | chr4_3:39725259-39725278 | Msa0640600:intron | 70.0% |
TTTGGGGGGGCGGGGCTTGT+AGG | + | chr4_3:39728144-39728163 | Msa0640600:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 39721653 | 39730200 | 39721653 | ID=Msa0640600;Name=Msa0640600 |
chr4_3 | mRNA | 39721653 | 39730200 | 39721653 | ID=Msa0640600-mRNA-1;Parent=Msa0640600;Name=Msa0640600-mRNA-1;_AED=0.09;_eAED=0.09;_QI=176|0.78|0.75|1|0.73|0.75|20|391|894 |
chr4_3 | exon | 39721653 | 39721877 | 39721653 | ID=Msa0640600-mRNA-1:exon:8905;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39722717 | 39722824 | 39722717 | ID=Msa0640600-mRNA-1:exon:8906;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39723166 | 39723384 | 39723166 | ID=Msa0640600-mRNA-1:exon:8907;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39723391 | 39723634 | 39723391 | ID=Msa0640600-mRNA-1:exon:8908;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39723662 | 39723908 | 39723662 | ID=Msa0640600-mRNA-1:exon:8909;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39723918 | 39724118 | 39723918 | ID=Msa0640600-mRNA-1:exon:8910;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39724131 | 39724325 | 39724131 | ID=Msa0640600-mRNA-1:exon:8911;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39724695 | 39724817 | 39724695 | ID=Msa0640600-mRNA-1:exon:8912;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39724977 | 39725050 | 39724977 | ID=Msa0640600-mRNA-1:exon:8913;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39725508 | 39725571 | 39725508 | ID=Msa0640600-mRNA-1:exon:8914;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39725695 | 39725841 | 39725695 | ID=Msa0640600-mRNA-1:exon:8915;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39725928 | 39726013 | 39725928 | ID=Msa0640600-mRNA-1:exon:8916;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39726842 | 39726911 | 39726842 | ID=Msa0640600-mRNA-1:exon:8917;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39727449 | 39727577 | 39727449 | ID=Msa0640600-mRNA-1:exon:8918;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39727701 | 39727928 | 39727701 | ID=Msa0640600-mRNA-1:exon:8919;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39728325 | 39728429 | 39728325 | ID=Msa0640600-mRNA-1:exon:8920;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39728503 | 39728655 | 39728503 | ID=Msa0640600-mRNA-1:exon:8921;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39729371 | 39729459 | 39729371 | ID=Msa0640600-mRNA-1:exon:8922;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39729565 | 39729645 | 39729565 | ID=Msa0640600-mRNA-1:exon:8923;Parent=Msa0640600-mRNA-1 |
chr4_3 | exon | 39729737 | 39730200 | 39729737 | ID=Msa0640600-mRNA-1:exon:8924;Parent=Msa0640600-mRNA-1 |
chr4_3 | five_prime_UTR | 39721653 | 39721828 | 39721653 | ID=Msa0640600-mRNA-1:five_prime_utr;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39721829 | 39721877 | 39721829 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39722717 | 39722824 | 39722717 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39723166 | 39723384 | 39723166 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39723391 | 39723634 | 39723391 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39723662 | 39723908 | 39723662 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39723918 | 39724118 | 39723918 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39724131 | 39724325 | 39724131 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39724695 | 39724817 | 39724695 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39724977 | 39725050 | 39724977 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39725508 | 39725571 | 39725508 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39725695 | 39725841 | 39725695 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39725928 | 39726013 | 39725928 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39726842 | 39726911 | 39726842 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39727449 | 39727577 | 39727449 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39727701 | 39727928 | 39727701 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39728325 | 39728429 | 39728325 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39728503 | 39728655 | 39728503 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39729371 | 39729459 | 39729371 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39729565 | 39729645 | 39729565 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | CDS | 39729737 | 39729809 | 39729737 | ID=Msa0640600-mRNA-1:cds;Parent=Msa0640600-mRNA-1 |
chr4_3 | three_prime_UTR | 39729810 | 39730200 | 39729810 | ID=Msa0640600-mRNA-1:three_prime_utr;Parent=Msa0640600-mRNA-1 |
Gene Sequence |
Protein sequence |