AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0643530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0643530 MtrunA17_Chr4g0029671 97.100 793 22 1 1 793 1 792 0.0 1604
Msa0643530 MtrunA17_Chr2g0326281 71.103 834 189 13 1 793 1 823 0.0 1126
Msa0643530 MtrunA17_Chr4g0046371 50.103 487 218 9 49 528 33 501 9.66e-144 439
Msa0643530 MtrunA17_Chr2g0282961 48.134 509 225 11 46 533 45 535 9.01e-142 431
Msa0643530 MtrunA17_Chr8g0385791 38.907 622 343 10 38 653 43 633 2.56e-137 426
Msa0643530 MtrunA17_Chr8g0385791 48.649 111 55 1 659 767 705 815 1.89e-29 125
Msa0643530 MtrunA17_Chr2g0276781 50.270 370 171 3 52 420 21 378 2.65e-122 382
Msa0643530 MtrunA17_Chr2g0276781 50.769 130 61 2 656 782 539 668 3.43e-31 130
Msa0643530 MtrunA17_Chr2g0285461 44.375 480 225 11 54 520 23 473 4.23e-110 357
Msa0643530 MtrunA17_Chr2g0285461 42.593 108 59 3 646 752 758 863 2.10e-19 93.6
Msa0643530 MtrunA17_Chr8g0346711 48.641 368 171 8 52 416 27 379 1.23e-109 349
Msa0643530 MtrunA17_Chr8g0346711 56.180 89 38 1 664 752 558 645 5.06e-25 111
Msa0643530 MtrunA17_Chr5g0433301 50.685 365 166 5 54 415 24 377 6.41e-109 352
Msa0643530 MtrunA17_Chr5g0433301 43.678 87 47 2 667 752 718 803 1.68e-17 87.4
Msa0643530 MtrunA17_Chr8g0376771 50.815 368 160 8 54 415 23 375 1.67e-108 353
Msa0643530 MtrunA17_Chr8g0376771 40.741 108 60 3 646 752 765 869 3.36e-18 89.7
Msa0643530 MtrunA17_Chr3g0109391 50.404 371 158 6 54 415 26 379 8.10e-108 349
Msa0643530 MtrunA17_Chr3g0109391 46.512 86 44 2 668 752 727 811 9.91e-18 88.2
Msa0643530 MtrunA17_Chr4g0009751 47.139 367 176 6 54 416 19 371 5.31e-107 341
Msa0643530 MtrunA17_Chr4g0009751 46.429 84 44 1 648 731 539 621 4.11e-16 82.4
Msa0643530 MtrunA17_Chr1g0156321 52.023 346 151 6 54 396 43 376 2.02e-105 343
Msa0643530 MtrunA17_Chr1g0156321 45.055 91 48 2 664 753 754 843 2.17e-18 90.5
Msa0643530 MtrunA17_Chr7g0239061 45.528 369 182 8 52 416 12 365 9.15e-102 329
Msa0643530 MtrunA17_Chr7g0239061 48.624 109 53 2 647 755 555 660 2.81e-25 112
Msa0643530 MtrunA17_Chr4g0070181 51.009 347 152 5 54 396 23 355 4.31e-98 329
Msa0643530 MtrunA17_Chr4g0070181 47.423 97 49 2 659 754 989 1084 1.15e-21 101
Msa0643530 MtrunA17_Chr2g0301251 50.291 344 159 4 54 396 23 355 6.10e-98 328
Msa0643530 MtrunA17_Chr2g0301251 47.423 97 49 2 659 754 981 1076 4.67e-21 99.4
Msa0643530 MtrunA17_Chr8g0389081 49.133 346 162 6 54 396 32 366 2.52e-93 315
Msa0643530 MtrunA17_Chr8g0389081 47.826 92 46 2 664 754 985 1075 9.44e-22 101
Msa0643530 MtrunA17_Chr2g0326761 41.775 383 171 7 54 399 11 378 3.50e-82 277
Msa0643530 MtrunA17_Chr1g0181211 37.530 413 204 8 54 426 27 425 1.08e-75 259
Msa0643530 MtrunA17_Chr1g0199681 39.950 403 184 10 54 416 94 478 2.71e-75 258
Msa0643530 MtrunA17_Chr4g0028971 36.207 464 216 8 54 461 12 451 2.09e-73 253
Msa0643530 MtrunA17_Chr7g0264171 34.361 454 213 12 54 452 31 454 3.64e-65 228
Msa0643530 MtrunA17_Chr8g0356211 41.297 293 155 8 174 460 2 283 8.91e-63 213
Msa0643530 MtrunA17_Chr3g0115271 35.859 396 206 8 54 416 19 399 4.15e-61 217
Msa0643530 MtrunA17_Chr5g0424931 35.550 391 201 11 54 416 19 386 4.13e-58 207
Msa0643530 MtrunA17_Chr7g0264161 38.629 321 170 8 63 376 1 301 1.11e-57 199
Msa0643530 MtrunA17_Chr5g0417281 34.146 369 207 9 54 414 11 351 1.70e-51 188
Msa0643530 MtrunA17_Chr5g0436761 34.986 363 212 9 54 413 12 353 1.34e-50 184
Msa0643530 MtrunA17_Chr1g0178011 31.452 372 216 9 54 412 12 357 9.25e-48 176
Msa0643530 MtrunA17_Chr5g0417211 34.699 366 192 15 54 409 12 340 2.25e-45 168
Msa0643530 MtrunA17_Chr2g0289221 34.754 305 163 8 54 348 20 298 2.42e-43 160
Msa0643530 MtrunA17_Chr2g0277461 31.608 367 224 9 54 417 13 355 5.10e-40 154
Msa0643530 MtrunA17_Chr5g0424741 28.866 388 240 12 54 417 12 387 8.09e-38 149
Msa0643530 MtrunA17_Chr2g0277531 31.333 300 173 12 54 345 20 294 6.76e-33 129
Msa0643530 MtrunA17_Chr5g0425661 33.971 209 126 2 54 262 37 233 5.59e-32 124
Msa0643530 MtrunA17_Chr5g0424801 28.767 365 232 11 54 412 12 354 1.09e-30 124
Msa0643530 MtrunA17_Chr5g0425261 28.426 394 245 13 54 441 12 374 1.98e-29 120
Msa0643530 MtrunA17_Chr1g0156301 36.667 90 41 2 664 753 177 250 3.18e-11 64.7
Msa0643530 MtrunA17_Chr7g0276471 36.111 108 68 1 164 271 116 222 6.73e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0643530 AT5G60450.2 60.395 760 257 13 48 793 35 764 0.0 842
Msa0643530 AT5G60450.1 60.714 756 253 14 52 793 63 788 0.0 840
Msa0643530 AT2G33860.1 50.202 494 180 12 53 535 53 491 3.17e-143 435
Msa0643530 AT5G62000.2 48.357 426 168 7 52 457 59 452 6.81e-131 411
Msa0643530 AT5G62000.2 52.830 106 50 0 653 758 722 827 2.17e-29 125
Msa0643530 AT5G62000.5 48.357 426 168 7 52 457 59 452 6.81e-131 411
Msa0643530 AT5G62000.5 52.830 106 50 0 653 758 722 827 2.17e-29 125
Msa0643530 AT5G62000.3 48.357 426 168 7 52 457 59 452 6.81e-131 411
Msa0643530 AT5G62000.3 52.830 106 50 0 653 758 722 827 2.17e-29 125
Msa0643530 AT5G62000.1 48.357 426 168 7 52 457 59 452 6.81e-131 411
Msa0643530 AT5G62000.1 52.830 106 50 0 653 758 722 827 2.17e-29 125
Msa0643530 AT5G62000.4 48.357 426 168 7 52 457 59 452 1.42e-130 410
Msa0643530 AT5G62000.4 49.565 115 58 0 653 767 722 836 2.11e-29 125
Msa0643530 AT1G59750.2 48.656 372 164 5 54 416 22 375 8.81e-117 368
Msa0643530 AT1G59750.2 57.143 98 42 0 656 753 531 628 1.67e-29 125
Msa0643530 AT1G59750.1 48.656 372 164 5 54 416 22 375 1.06e-116 368
Msa0643530 AT1G59750.1 57.143 98 42 0 656 753 534 631 1.56e-29 125
Msa0643530 AT1G59750.3 48.656 372 164 5 54 416 22 375 1.06e-116 368
Msa0643530 AT1G59750.3 57.143 98 42 0 656 753 534 631 1.56e-29 125
Msa0643530 AT1G59750.4 48.656 372 164 5 54 416 22 375 1.08e-116 368
Msa0643530 AT1G59750.4 57.143 98 42 0 656 753 529 626 1.68e-29 125
Msa0643530 AT5G37020.2 51.366 366 162 6 54 415 22 375 1.30e-110 355
Msa0643530 AT5G37020.2 50.725 69 32 2 664 731 705 772 7.33e-15 79.3
Msa0643530 AT3G61830.1 47.945 365 159 6 41 396 12 354 2.40e-110 349
Msa0643530 AT3G61830.1 46.226 106 56 1 648 753 473 577 9.31e-24 107
Msa0643530 AT5G37020.1 51.366 366 162 6 54 415 22 375 4.79e-110 355
Msa0643530 AT5G37020.1 46.667 90 46 2 664 752 705 793 1.52e-18 91.3
Msa0643530 AT1G30330.3 44.421 466 210 10 54 483 25 477 1.03e-108 354
Msa0643530 AT1G30330.3 43.564 101 53 3 655 752 785 884 7.96e-19 92.4
Msa0643530 AT1G30330.2 44.421 466 210 10 54 483 25 477 1.03e-108 354
Msa0643530 AT1G30330.2 43.564 101 53 3 655 752 785 884 7.96e-19 92.4
Msa0643530 AT1G30330.1 44.421 466 210 10 54 483 23 475 1.42e-108 354
Msa0643530 AT1G30330.1 43.564 101 53 3 655 752 783 882 8.30e-19 92.0
Msa0643530 AT2G33860.2 50.532 376 139 8 165 535 1 334 1.12e-107 337
Msa0643530 AT2G46530.1 45.745 376 171 7 52 416 19 372 2.26e-107 342
Msa0643530 AT2G46530.1 40.136 147 54 2 639 752 432 577 7.33e-26 113
Msa0643530 AT2G46530.3 45.745 376 171 7 52 416 40 393 3.93e-107 342
Msa0643530 AT2G46530.3 40.136 147 54 2 639 752 453 598 8.94e-26 113
Msa0643530 AT4G23980.1 46.770 387 182 9 52 432 10 378 1.93e-104 335
Msa0643530 AT4G23980.1 52.294 109 50 2 648 755 506 613 1.52e-27 119
Msa0643530 AT4G23980.2 46.736 383 179 9 52 425 10 376 3.86e-104 334
Msa0643530 AT4G23980.2 52.294 109 50 2 648 755 504 611 1.45e-27 119
Msa0643530 AT1G19850.2 49.861 361 160 9 41 396 33 377 2.41e-102 336
Msa0643530 AT1G19850.2 43.434 99 54 2 656 753 774 871 7.19e-18 89.0
Msa0643530 AT1G19850.1 49.861 361 160 9 41 396 44 388 2.60e-102 336
Msa0643530 AT1G19850.1 43.434 99 54 2 656 753 785 882 7.90e-18 89.0
Msa0643530 AT1G19220.1 51.163 344 156 4 54 396 23 355 3.45e-99 332
Msa0643530 AT1G19220.1 48.454 97 48 2 659 754 953 1048 6.40e-22 102
Msa0643530 AT3G61830.2 49.355 310 128 5 94 396 16 303 5.44e-96 310
Msa0643530 AT3G61830.2 46.226 106 56 1 648 753 422 526 6.75e-24 107
Msa0643530 AT5G20730.2 50.291 344 159 4 54 396 24 356 6.08e-96 324
Msa0643530 AT5G20730.2 46.392 97 50 2 659 754 1032 1127 9.23e-21 98.6
Msa0643530 AT5G20730.3 50.145 345 159 5 54 396 24 357 1.95e-94 320
Msa0643530 AT5G20730.3 46.392 97 50 2 659 754 1033 1128 8.27e-21 99.0
Msa0643530 AT5G20730.1 50.145 345 159 5 54 396 24 357 3.32e-94 319
Msa0643530 AT5G20730.1 46.392 97 50 2 659 754 1033 1128 9.47e-21 98.6
Msa0643530 AT1G35540.1 40.470 383 206 8 49 428 22 385 8.90e-88 290
Msa0643530 AT1G35540.1 51.546 97 46 1 656 752 502 597 1.18e-24 110
Msa0643530 AT1G34310.1 41.351 370 194 8 49 416 22 370 3.18e-86 285
Msa0643530 AT1G34310.1 52.747 91 42 1 656 746 503 592 1.11e-22 103
Msa0643530 AT1G34170.1 40.437 366 196 7 52 414 23 369 3.43e-85 280
Msa0643530 AT1G35240.1 42.120 349 183 6 49 396 22 352 2.66e-84 280
Msa0643530 AT1G35240.1 53.684 95 43 1 656 750 489 582 8.15e-24 107
Msa0643530 AT1G34410.1 40.374 374 192 8 49 420 22 366 6.10e-84 280
Msa0643530 AT1G34410.1 32.222 270 130 9 496 750 365 596 6.64e-25 110
Msa0643530 AT5G37020.3 53.640 261 119 2 156 415 21 280 1.11e-83 282
Msa0643530 AT5G37020.3 46.667 90 46 2 664 752 610 698 1.28e-18 91.3
Msa0643530 AT1G35520.1 40.811 370 196 8 49 416 22 370 3.32e-82 275
Msa0643530 AT1G35520.1 49.451 91 45 1 656 746 503 592 5.49e-22 101
Msa0643530 AT2G28350.2 40.796 402 184 8 54 413 10 399 1.27e-80 272
Msa0643530 AT2G28350.1 40.796 402 184 8 54 413 10 399 1.48e-80 273
Msa0643530 AT1G34390.1 41.160 362 187 8 49 404 22 363 1.22e-79 268
Msa0643530 AT1G34390.1 31.950 241 115 7 520 746 385 590 1.79e-21 100
Msa0643530 AT2G46530.2 49.035 259 126 4 160 416 31 285 1.34e-79 265
Msa0643530 AT2G46530.2 40.136 147 54 2 639 752 345 490 3.42e-26 114
Msa0643530 AT4G30080.1 40.750 400 186 9 54 416 19 404 1.39e-79 270
Msa0643530 AT1G34170.2 37.978 366 179 7 52 414 23 343 3.36e-73 247
Msa0643530 AT1G34170.3 37.978 366 179 7 52 414 23 343 2.88e-72 246
Msa0643530 AT1G34170.3 41.667 108 55 2 652 752 414 520 3.86e-20 95.5
Msa0643530 AT1G77850.1 32.080 399 219 8 55 418 20 401 1.74e-55 201
Msa0643530 AT1G77850.2 32.080 399 219 8 55 418 20 401 1.78e-55 201
Msa0643530 AT1G43950.1 42.922 219 105 6 49 265 22 222 2.37e-48 171
Msa0643530 AT4G01500.1 38.043 92 54 1 164 255 34 122 2.64e-11 66.2
Msa0643530 AT2G46870.1 35.772 123 75 3 152 271 21 142 4.57e-11 65.5
Msa0643530 AT1G13260.1 35.088 114 70 2 154 263 174 287 8.50e-11 64.7

Find 229 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTAATTGTCAATCTTTC+TGG 0.134143 4_3:+46556994 None:intergenic
TTTCAGTTATGCAGGCTTTA+TGG 0.176843 4_3:-46558567 Msa0643530:CDS
CATCTTCTCCACTTCTTCTT+TGG 0.185315 4_3:+46557265 None:intergenic
TTGCCGTGTTCTGTAAATTT+TGG 0.187263 4_3:+46558123 None:intergenic
CTTCTTCTTTGGTATATATA+TGG 0.187674 4_3:+46557276 None:intergenic
TGCAACAGATGAAAGGAAAT+TGG 0.198707 4_3:+46559926 None:intergenic
GTTTGGTTTGGGGTGGAATT+TGG 0.205168 4_3:-46556831 Msa0643530:three_prime_UTR
TAGTTAGAGTCTAAAGTTTC+AGG 0.206625 4_3:-46557130 Msa0643530:exon
AATATTGTAAGGTGAGAATT+TGG 0.216999 4_3:-46556769 Msa0643530:three_prime_UTR
GGTATCTCCAATTGTTTAAA+AGG 0.223290 4_3:+46562505 None:intergenic
AACCAAAAGAATCTTGTTTC+TGG 0.233692 4_3:-46560510 Msa0643530:CDS
GTTTCTGCTTCTGCTTCATT+AGG 0.240616 4_3:-46558242 Msa0643530:CDS
TATAATTTGATGTTGCATTT+TGG 0.250991 4_3:-46557066 Msa0643530:three_prime_UTR
TGTAAACTGAAATCCCTTTC+AGG 0.261732 4_3:-46558503 Msa0643530:CDS
TTTATGAATGTGTTTGGTTT+GGG 0.263235 4_3:-46556842 Msa0643530:three_prime_UTR
TTACATTACCTCTATAAATA+TGG 0.265982 4_3:+46560655 None:intergenic
CACATTATCACTCATGAAAT+TGG 0.273412 4_3:+46558364 None:intergenic
TCCTGCAGCTTATGCTCATC+TGG 0.276011 4_3:+46558269 None:intergenic
CTTCTTCTTATCTTGAACTA+TGG 0.284809 4_3:-46562624 Msa0643530:CDS
TGCCATAAGGAATGTGAAAA+AGG 0.290889 4_3:-46562718 Msa0643530:CDS
TGACTTTGTAGGGGTGAAAA+TGG 0.293444 4_3:-46560032 Msa0643530:intron
CACCAGAAACAAGATTCTTT+TGG 0.294480 4_3:+46560508 None:intergenic
GTACCTACAAATGGAGATAA+TGG 0.308535 4_3:-46563087 Msa0643530:five_prime_UTR
GATTCTGGAAGACCATTTCT+AGG 0.308538 4_3:+46559975 None:intergenic
TCCGCGGTTTCTTCAGTCTT+GGG 0.308610 4_3:+46559115 None:intergenic
ACACAATTCTCAAGAGATAT+TGG 0.310800 4_3:+46556925 None:intergenic
TTTCTGCTTCTGCTTCATTA+GGG 0.316596 4_3:-46558241 Msa0643530:CDS
TGATTACCGACAATTGATTC+TGG 0.328677 4_3:+46559960 None:intergenic
AGTGAACTGGAGAAACTATT+TGG 0.334062 4_3:-46557917 Msa0643530:CDS
GTTGATTGGAATAAATGATT+TGG 0.346668 4_3:-46559497 Msa0643530:CDS
TTTGAAGGTTCAATAATAAC+TGG 0.349549 4_3:+46557191 None:intergenic
GAAGTGGAGAAGATGACATT+TGG 0.355497 4_3:-46557257 Msa0643530:CDS
AAGTGGAGAAGATGACATTT+GGG 0.357385 4_3:-46557256 Msa0643530:CDS
GCAAATTCCTGCAAACTATT+CGG 0.358986 4_3:-46558173 Msa0643530:CDS
AACCTCATCATTCTCCTTGT+TGG 0.359424 4_3:+46562163 None:intergenic
GCTGAGCTAACTAGCTCAAA+AGG 0.362860 4_3:+46557036 None:intergenic
ATAGATGGCCTAAATCAAAA+TGG 0.363531 4_3:-46559468 Msa0643530:CDS
AGAAACAAAGACAGTGTTCA+TGG 0.366292 4_3:-46562788 Msa0643530:exon
TGATTTCAACATCGGAGCTT+GGG 0.367716 4_3:-46558474 Msa0643530:CDS
ACCACAGCATTTCCTTTCTT+AGG 0.369129 4_3:+46562571 None:intergenic
GTCCGCGGTTTCTTCAGTCT+TGG 0.371861 4_3:+46559114 None:intergenic
AGAAAAGAAGTTGGAAGATC+TGG 0.374337 4_3:-46558305 Msa0643530:CDS
CTCCACACCATGCAGGTCTT+TGG 0.378354 4_3:+46560689 None:intergenic
GAAAACATGAAACATGCTTT+TGG 0.379376 4_3:+46559890 None:intergenic
ATTTACAGAACACGGCAAAA+AGG 0.386474 4_3:-46558118 Msa0643530:CDS
CATCAAAACCTGGCATCAAC+TGG 0.390598 4_3:-46558635 Msa0643530:CDS
ATCAAAATGGAGGTGCTTGA+TGG 0.392147 4_3:-46559455 Msa0643530:intron
ATTCCATTATCTCCATTTGT+AGG 0.392289 4_3:+46563084 None:intergenic
TCTTGACCTTGCAAGACCTT+TGG 0.393008 4_3:+46558740 None:intergenic
AAAGAAGTTGAGGAATTAGA+AGG 0.393061 4_3:-46561408 Msa0643530:CDS
CTTCTTAGAGATTCTGATAA+GGG 0.397025 4_3:-46557884 Msa0643530:CDS
TCAAGAATCCAGTGAGTATA+GGG 0.398915 4_3:-46559668 Msa0643530:CDS
TCAGTTGGCAGGGATGCATA+TGG 0.400937 4_3:-46561436 Msa0643530:intron
GTGATGCAGTGCTCTTTCTA+AGG 0.401447 4_3:-46560488 Msa0643530:intron
CACAAGCAAGGAAGCTTAGT+TGG 0.408419 4_3:-46557986 Msa0643530:CDS
CTATTCGGCTTTCCTTTGTC+TGG 0.408734 4_3:-46558158 Msa0643530:CDS
GTTCAAAATGAGAATTGAAA+TGG 0.409109 4_3:-46559640 Msa0643530:CDS
TGAAAATGGAGAGCTGAGAT+TGG 0.413215 4_3:-46560018 Msa0643530:CDS
GCAACAGATGAAAGGAAATT+GGG 0.413332 4_3:+46559927 None:intergenic
TTTGATTTAGGCCATCTATA+GGG 0.413502 4_3:+46559472 None:intergenic
CCAACTGAGGAAGACTTTGA+AGG 0.413561 4_3:+46557176 None:intergenic
GGAACATTTAAAATATTGTA+AGG 0.418116 4_3:-46556780 Msa0643530:three_prime_UTR
ACTATCGATGGCGTGTTAAA+CGG 0.418788 4_3:+46558341 None:intergenic
GGAGATGATGAGGGAGATGG+AGG 0.422354 4_3:-46561387 Msa0643530:CDS
GTTAATCCTTTCAGTTATGC+AGG 0.425087 4_3:-46558575 Msa0643530:CDS
ACTACTGTTGGAGAATAATC+TGG 0.435153 4_3:+46557149 None:intergenic
AGCAGGAATCAGTGGAATGA+TGG 0.437544 4_3:-46558786 Msa0643530:CDS
TTCCTATTCCAGTTGATGCC+AGG 0.437834 4_3:+46558627 None:intergenic
TGAGGCTGAAGATCATAGTT+TGG 0.438101 4_3:+46562484 None:intergenic
CTGATTTCAACATCGGAGCT+TGG 0.438282 4_3:-46558475 Msa0643530:CDS
TGGGGAAGACTGAATGCTTA+GGG 0.438392 4_3:+46559134 None:intergenic
CAGTGGAATGATGGGCTTTG+AGG 0.440411 4_3:-46558777 Msa0643530:CDS
GAAGGAGATGATGAGGGAGA+TGG 0.440596 4_3:-46561390 Msa0643530:CDS
CTTACTTCACTTCCTAAGAA+AGG 0.441936 4_3:-46562583 Msa0643530:CDS
AGGAAAGCCGAATAGTTTGC+AGG 0.443064 4_3:+46558166 None:intergenic
AATTGTGTACTCTAGAATTA+TGG 0.444292 4_3:-46556910 Msa0643530:three_prime_UTR
ATGATTTGGATCCCTATAGA+TGG 0.446543 4_3:-46559483 Msa0643530:CDS
CTCTTCTATGTACCTACAAA+TGG 0.447258 4_3:-46563096 Msa0643530:five_prime_UTR
TGATGATACTCATAGCTGTT+TGG 0.448093 4_3:-46557222 Msa0643530:CDS
CAATGATCTTCTGAGTGAAC+TGG 0.449039 4_3:-46557930 Msa0643530:CDS
GAACTATGGCATGCTTGTGC+TGG 0.452079 4_3:-46562610 Msa0643530:CDS
CTTGAAGATGAACAAGTTGA+AGG 0.457374 4_3:+46562667 None:intergenic
TACTCATAGCTGTTTGGATC+AGG 0.457597 4_3:-46557216 Msa0643530:CDS
CTTTAGACTCTAACTACTGT+TGG 0.457649 4_3:+46557137 None:intergenic
TTTCCTTTGTCTGGCGAACC+TGG 0.458093 4_3:-46558149 Msa0643530:CDS
TTGGGGAAGACTGAATGCTT+AGG 0.458895 4_3:+46559133 None:intergenic
AGTTAGAGTCTAAAGTTTCA+GGG 0.465120 4_3:-46557129 Msa0643530:exon
AACCTTGTCCCTATACTCAC+TGG 0.465299 4_3:+46559660 None:intergenic
AACCTGGCATCAACTGGAAT+AGG 0.466535 4_3:-46558629 Msa0643530:CDS
CGATCTCCCATGGCGATACT+CGG 0.468600 4_3:+46559178 None:intergenic
GGAATTAGAAGGAGATGATG+AGG 0.468694 4_3:-46561397 Msa0643530:CDS
TTCTGCTTCATTAGGGGATA+CGG 0.472517 4_3:-46558234 Msa0643530:CDS
TTCTTAGGAAGTGAAGTAAG+AGG 0.473214 4_3:+46562586 None:intergenic
ACTTCTTAGAGATTCTGATA+AGG 0.476305 4_3:-46557885 Msa0643530:CDS
GTGACATACAACAGGTAAGA+TGG 0.476656 4_3:-46559230 Msa0643530:intron
ATCACTGGTATGAATCCTAA+TGG 0.476712 4_3:-46559060 Msa0643530:intron
CTAAAGTTTCAGGGTTGTGT+TGG 0.478705 4_3:-46557120 Msa0643530:exon
ATCAAGAATCCAGTGAGTAT+AGG 0.479733 4_3:-46559669 Msa0643530:CDS
AGGCGGCATCTACTCACAAC+TGG 0.483600 4_3:-46560549 Msa0643530:CDS
TGTAGTAGTGGTATGTTGAT+TGG 0.485540 4_3:-46559511 Msa0643530:CDS
AAACATGCAGATTGAAAACT+AGG 0.485809 4_3:+46558443 None:intergenic
GAAACCGCGGACCGGTCTAC+TGG 0.486331 4_3:-46559103 Msa0643530:CDS
TGGAAAGTAACAACTTTCCA+AGG 0.487409 4_3:-46558547 Msa0643530:CDS
GTTTAACACGCCATCGATAG+TGG 0.488043 4_3:-46558339 Msa0643530:CDS
AACACGCCATCGATAGTGGC+AGG 0.488155 4_3:-46558335 Msa0643530:CDS
AAATTTCGCCATATTTATAG+AGG 0.488170 4_3:-46560663 Msa0643530:intron
TCTTGACCTTGCAAGACCCT+TGG 0.488979 4_3:+46558530 None:intergenic
TTTCTTGAGAGAGTCTCAAA+TGG 0.494706 4_3:+46562806 None:intergenic
TTGCAAGGTCAAGAAAATAC+AGG 0.496208 4_3:-46558731 Msa0643530:CDS
CCTTCAAAGTCTTCCTCAGT+TGG 0.496667 4_3:-46557176 Msa0643530:CDS
CATACCAGTGATGAGGTGAT+TGG 0.496922 4_3:+46559071 None:intergenic
GAAGAATGCATTGTGCCATA+AGG 0.497724 4_3:-46562731 Msa0643530:CDS
TGAATGTGTTTGGTTTGGGG+TGG 0.498907 4_3:-46556838 Msa0643530:three_prime_UTR
AGAGCAGTTAGACCTAGAAA+TGG 0.500813 4_3:-46559987 Msa0643530:CDS
ATTGAGTACTTACAAGTAGC+TGG 0.503595 4_3:+46562437 None:intergenic
TGCAGATTGAAAACTAGGCT+TGG 0.506257 4_3:+46558448 None:intergenic
GAAAATGGAGAGCTGAGATT+GGG 0.510036 4_3:-46560017 Msa0643530:CDS
GTCTCTGATACGAGCACTCA+TGG 0.511750 4_3:-46561318 Msa0643530:CDS
CACTAAATAAGTGCTAGTCT+TGG 0.513447 4_3:-46556971 Msa0643530:three_prime_UTR
CATTCTCACTGTCAGTGTAA+AGG 0.513773 4_3:+46557852 None:intergenic
TATATATACCAAAGAAGAAG+TGG 0.514232 4_3:-46557273 Msa0643530:CDS
TGCTCAACTCAAAACCTGGC+TGG 0.515074 4_3:+46558669 None:intergenic
CCGCGGTTTCTTCAGTCTTG+GGG 0.515903 4_3:+46559116 None:intergenic
GGGAACATTAGAAAAGAAGT+TGG 0.522575 4_3:-46558314 Msa0643530:CDS
TACTCTGCTACCTCAGGCCG+AGG 0.524493 4_3:-46562129 Msa0643530:intron
CCTGCAGCTTATGCTCATCT+GGG 0.525700 4_3:+46558270 None:intergenic
GAATTAGAAGGAGATGATGA+GGG 0.528978 4_3:-46561396 Msa0643530:CDS
CCCAGATGAGCATAAGCTGC+AGG 0.530785 4_3:-46558270 Msa0643530:CDS
GAAGAGCCATTGACCTCTCT+AGG 0.534153 4_3:-46557964 Msa0643530:CDS
ACAGCTATGAGTATCATCAT+TGG 0.534267 4_3:+46557226 None:intergenic
GGCATCTACTCACAACTGGC+TGG 0.536364 4_3:-46560545 Msa0643530:CDS
TGAGAATGACATAATGGTTG+TGG 0.539248 4_3:-46557837 Msa0643530:CDS
CAACTCAAAACCTGGCTGGT+TGG 0.540058 4_3:+46558673 None:intergenic
TGGATGAATCACCAGAAAGA+AGG 0.543057 4_3:-46559620 Msa0643530:intron
TGAATGCTTAGGGGAGGCTG+AGG 0.543172 4_3:+46559144 None:intergenic
TCACCCAATCACCTCATCAC+TGG 0.544643 4_3:-46559075 Msa0643530:CDS
TTAGAGATTCTGATAAGGGA+TGG 0.545399 4_3:-46557880 Msa0643530:CDS
GCAGGAATCAGTGGAATGAT+GGG 0.546322 4_3:-46558785 Msa0643530:CDS
TTCTGCTTCTGCTTCATTAG+GGG 0.547616 4_3:-46558240 Msa0643530:CDS
TTATGAATGTGTTTGGTTTG+GGG 0.550292 4_3:-46556841 Msa0643530:three_prime_UTR
TTTGGCAACAAGCTCTTGAG+AGG 0.551407 4_3:+46560707 None:intergenic
TAAGTGCTAGTCTTGGAAGT+TGG 0.551675 4_3:-46556964 Msa0643530:three_prime_UTR
AAGAAGAATACTTACTGCCA+TGG 0.552627 4_3:+46557806 None:intergenic
TCTAAACAATGAAGTGATTG+AGG 0.553452 4_3:-46562758 Msa0643530:CDS
CTGAGCTAACTAGCTCAAAA+GGG 0.554241 4_3:+46557037 None:intergenic
TGACAGTGAGAATGACATAA+TGG 0.554268 4_3:-46557843 Msa0643530:CDS
AATTGTTCTAAATGACCTTG+TGG 0.560241 4_3:+46562541 None:intergenic
GGAAAAGCTGATTTCAACAT+CGG 0.565551 4_3:-46558482 Msa0643530:CDS
TGACATACAACAGGTAAGAT+GGG 0.566150 4_3:-46559229 Msa0643530:intron
GGTCTTCCAGAATCAATTGT+CGG 0.567384 4_3:-46559966 Msa0643530:CDS
GAGAATGACATAATGGTTGT+GGG 0.567615 4_3:-46557836 Msa0643530:CDS
ATGTTCCCTGCCACTATCGA+TGG 0.570468 4_3:+46558329 None:intergenic
ATACCAGTGATGAGGTGATT+GGG 0.571375 4_3:+46559072 None:intergenic
ACAAGTTACTCTGCTACCTC+AGG 0.572482 4_3:-46562135 Msa0643530:CDS
GAGATGATGAGGGAGATGGA+GGG 0.573908 4_3:-46561386 Msa0643530:CDS
ATAGGAAGCACAGAAACAAA+AGG 0.575186 4_3:+46563143 None:intergenic
TAGCATTTGCAACAGATGAA+AGG 0.577301 4_3:+46559919 None:intergenic
ATAAAGCCTGCATAACTGAA+AGG 0.578447 4_3:+46558569 None:intergenic
CAATCTTGTAGGTGTAGTAG+TGG 0.581993 4_3:-46559523 Msa0643530:intron
GATTTCAACATCGGAGCTTG+GGG 0.582139 4_3:-46558473 Msa0643530:CDS
AGAATTTGGTAAATGCACTC+TGG 0.587961 4_3:-46556755 Msa0643530:three_prime_UTR
GACAAAGTAACCAACCAGCC+AGG 0.589462 4_3:-46558683 Msa0643530:CDS
TTTATGGCAGCAGGAATCAG+TGG 0.590392 4_3:-46558794 Msa0643530:intron
TAAATGAAGGTTCACAAGCA+AGG 0.591824 4_3:-46557998 Msa0643530:intron
ATCAAGACCGAGTATCGCCA+TGG 0.592676 4_3:-46559185 Msa0643530:CDS
CCAAAAGTCACAACCCACAT+TGG 0.594115 4_3:-46563175 None:intergenic
TGTGTACTCTAGAATTATGG+TGG 0.595811 4_3:-46556907 Msa0643530:three_prime_UTR
ATTTCCACTCCACACCATGC+AGG 0.596067 4_3:+46560682 None:intergenic
AACTTTCCAAGGGTCTTGCA+AGG 0.597137 4_3:-46558536 Msa0643530:CDS
ACTGGAGAAACTATTTGGCA+TGG 0.598525 4_3:-46557912 Msa0643530:CDS
AGACTGAAGAAACCGCGGAC+CGG 0.598571 4_3:-46559111 Msa0643530:CDS
GAGAAACTATTTGGCATGGA+AGG 0.600086 4_3:-46557908 Msa0643530:CDS
TTCAAGTCATCATCAAAACC+TGG 0.600469 4_3:-46558645 Msa0643530:CDS
GAAAGATTTCATACCAAAGG+AGG 0.600755 4_3:+46561255 None:intergenic
GGGTGAGGTAACCAGTAGAC+CGG 0.601618 4_3:+46559092 None:intergenic
TCTTAGGAAGTGAAGTAAGA+GGG 0.602953 4_3:+46562587 None:intergenic
GTTGTGAGTAGATGCCGCCT+TGG 0.606611 4_3:+46560552 None:intergenic
GTGTCTTGCAGAACATGTGA+GGG 0.607798 4_3:+46561346 None:intergenic
TAAATTTGTCAGGTCAGCCA+AGG 0.607995 4_3:-46560569 Msa0643530:intron
GAAGAAAGATCGATCTCCCA+TGG 0.608121 4_3:+46559168 None:intergenic
ACAACAGGTAAGATGGGATG+AGG 0.612245 4_3:-46559223 Msa0643530:intron
CTACCAGGTTCGCCAGACAA+AGG 0.612527 4_3:+46558146 None:intergenic
ATTTGTAGGTACATAGAAGA+GGG 0.613006 4_3:+46563098 None:intergenic
GTTGGCAGGGATGCATATGG+AGG 0.615211 4_3:-46561433 Msa0643530:CDS
GAAGTGCTCAACTCAAAACC+TGG 0.615230 4_3:+46558665 None:intergenic
GCTTTGTCAATATCTCCGTA+AGG 0.616225 4_3:+46558419 None:intergenic
AGTGTCTTGCAGAACATGTG+AGG 0.616842 4_3:+46561345 None:intergenic
TATGGAGGGAAAAGAAGTTG+AGG 0.617895 4_3:-46561418 Msa0643530:CDS
GGAAAGTAACAACTTTCCAA+GGG 0.618100 4_3:-46558546 Msa0643530:CDS
AGATCACCAAAGGTCTTGCA+AGG 0.621574 4_3:-46558746 Msa0643530:CDS
GAAGACAGAGACAATTGCAT+AGG 0.621616 4_3:+46563125 None:intergenic
AAAGGCAAGTAAAGCCAATG+TGG 0.622004 4_3:+46563161 None:intergenic
ATAATCTGGCTGACCAACTG+AGG 0.623428 4_3:+46557163 None:intergenic
CATTTGTAGGTACATAGAAG+AGG 0.624421 4_3:+46563097 None:intergenic
TAGCCAAAATTTACAGAACA+CGG 0.629316 4_3:-46558126 Msa0643530:CDS
AAGACCTGCATGGTGTGGAG+TGG 0.629896 4_3:-46560686 Msa0643530:CDS
GAGATTCTGATAAGGGATGG+AGG 0.631623 4_3:-46557877 Msa0643530:CDS
TTTCATATTTCATGTCATGG+TGG 0.631774 4_3:-46556883 Msa0643530:three_prime_UTR
TGCCAAAGACCTGCATGGTG+TGG 0.632330 4_3:-46560691 Msa0643530:CDS
TTGGCAACAAGCTCTTGAGA+GGG 0.634142 4_3:+46560708 None:intergenic
AGTGATGAGGTGATTGGGTG+AGG 0.637047 4_3:+46559077 None:intergenic
GCTCAACCTAGAGAGGTCAA+TGG 0.642235 4_3:+46557958 None:intergenic
GGGGAAGACTGAATGCTTAG+GGG 0.643082 4_3:+46559135 None:intergenic
ACAACCCTGCAAAAGATCTG+AGG 0.644320 4_3:+46562466 None:intergenic
TCCTAAGAAAGGAAATGCTG+TGG 0.646329 4_3:-46562572 Msa0643530:CDS
TAGGATTCATACCAGTGATG+AGG 0.646397 4_3:+46559064 None:intergenic
TGTAGCCGCTCAACCTAGAG+AGG 0.646576 4_3:+46557951 None:intergenic
ATCCAGTGAGTATAGGGACA+AGG 0.648334 4_3:-46559662 Msa0643530:CDS
TTGGCAGGGATGCATATGGA+GGG 0.649105 4_3:-46561432 Msa0643530:CDS
AGATAAGAAGAAGAAACAAG+TGG 0.649698 4_3:+46562634 None:intergenic
AAGGCAAGTAAAGCCAATGT+GGG 0.652062 4_3:+46563162 None:intergenic
ATTGACCTCTCTAGGTTGAG+CGG 0.652349 4_3:-46557956 Msa0643530:CDS
GATGGCCTAAATCAAAATGG+AGG 0.658795 4_3:-46559465 Msa0643530:CDS
GGAGTCAGTAAGATCACCAA+AGG 0.663614 4_3:-46558756 Msa0643530:CDS
TCAAGACCGAGTATCGCCAT+GGG 0.667440 4_3:-46559184 Msa0643530:CDS
GCAGCTTATGCTCATCTGGG+AGG 0.672574 4_3:+46558273 None:intergenic
ACACGCCATCGATAGTGGCA+GGG 0.674307 4_3:-46558334 Msa0643530:CDS
GAAGACTGAATGCTTAGGGG+AGG 0.675841 4_3:+46559138 None:intergenic
ATTTGTCAGGTCAGCCAAGG+CGG 0.677198 4_3:-46560566 Msa0643530:intron
GAATGACATAATGGTTGTGG+GGG 0.679524 4_3:-46557834 Msa0643530:CDS
AGAATGACATAATGGTTGTG+GGG 0.682622 4_3:-46557835 Msa0643530:CDS
GGCCAACAAGGAGAATGATG+AGG 0.688468 4_3:-46562165 Msa0643530:CDS
CCCCAAGACTGAAGAAACCG+CGG 0.689701 4_3:-46559116 Msa0643530:CDS
CAATCTTCAGCAGCTCTACG+AGG 0.704658 4_3:+46561282 None:intergenic
TCTGATACGAGCACTCATGG+TGG 0.704836 4_3:-46561315 Msa0643530:CDS
CTTGTTGCCAAAGACCTGCA+TGG 0.711328 4_3:-46560696 Msa0643530:CDS
ATTAACACTCATAAGCTCAG+AGG 0.715454 4_3:+46558592 None:intergenic
GTAACCAGTAGACCGGTCCG+CGG 0.729539 4_3:+46559099 None:intergenic
TGTCTTGCAGAACATGTGAG+GGG 0.734062 4_3:+46561347 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAAAGATAGAAAAAA+GGG + chr4_3:46557039-46557058 None:intergenic 10.0%
!! TTTATTTAAAGATAGAAAAA+AGG + chr4_3:46557040-46557059 None:intergenic 10.0%
!!! AAATATTTTTAATGATGAAA+CGG - chr4_3:46560627-46560646 Msa0643530:intron 10.0%
!!! TGATTTTTTCAAATTTTTAG+AGG - chr4_3:46557621-46557640 Msa0643530:intron 15.0%
!!! TTTTTTATGTTCTTTATGTT+TGG - chr4_3:46557812-46557831 Msa0643530:intron 15.0%
!! TTATAACTTATGAAAACAAT+TGG - chr4_3:46558885-46558904 Msa0643530:intron 15.0%
!! ATTAAATTGTTTATCCAAAA+AGG - chr4_3:46559101-46559120 Msa0643530:CDS 15.0%
!! ATATAATATACACTAAATGA+AGG - chr4_3:46561889-46561908 Msa0643530:intron 15.0%
!!! AATATTTTTATGAATGTGTT+TGG - chr4_3:46563052-46563071 Msa0643530:five_prime_UTR 15.0%
!! TAAAGATAAGAAAAAAAGGA+AGG + chr4_3:46556902-46556921 None:intergenic 20.0%
!!! TTTTTTTCATATTGCAAACA+AGG + chr4_3:46556927-46556946 None:intergenic 20.0%
!!! TGAATTCATGTAACATATTT+TGG - chr4_3:46557683-46557702 Msa0643530:intron 20.0%
!!! AAATTCTTGTTTCTTTTAAC+AGG - chr4_3:46557714-46557733 Msa0643530:intron 20.0%
!! AAAAAAAAAAAAACCAACCT+CGG + chr4_3:46557791-46557810 None:intergenic 20.0%
!! CAATAGTAAATAAACATGTT+TGG + chr4_3:46557847-46557866 None:intergenic 20.0%
!! CTTTGAATAATTGATGTATT+TGG - chr4_3:46557976-46557995 Msa0643530:CDS 20.0%
!! ATCCTATAGTAAAAAGTAAA+AGG + chr4_3:46559157-46559176 None:intergenic 20.0%
!! TTACATTACCTCTATAAATA+TGG + chr4_3:46559248-46559267 None:intergenic 20.0%
!!! CTTTTATAAATGACTTTGTA+GGG - chr4_3:46559858-46559877 Msa0643530:intron 20.0%
!!! TTTTATAAATGACTTTGTAG+GGG - chr4_3:46559859-46559878 Msa0643530:intron 20.0%
!!! CTTTTAACATATTTTTGGTA+CGG + chr4_3:46560210-46560229 None:intergenic 20.0%
!!! TGATGCTTTTAACATATTTT+TGG + chr4_3:46560215-46560234 None:intergenic 20.0%
!! TATAAATGATGAGTTATGAT+TGG + chr4_3:46560579-46560598 None:intergenic 20.0%
!! TCATCATTTATATGACTTTA+AGG - chr4_3:46560587-46560606 Msa0643530:intron 20.0%
!! AAATAGATTGAATGTATTCT+TGG - chr4_3:46560943-46560962 Msa0643530:intron 20.0%
!! AATAGATTGAATGTATTCTT+GGG - chr4_3:46560944-46560963 Msa0643530:intron 20.0%
!! AACAAAGAAAGAATATGATT+AGG + chr4_3:46561083-46561102 None:intergenic 20.0%
!!! TTCTTTCTTTGTTTCATTTA+TGG - chr4_3:46561090-46561109 Msa0643530:intron 20.0%
!!! TATAATTTGATGTTGCATTT+TGG - chr4_3:46562834-46562853 Msa0643530:five_prime_UTR 20.0%
!! TTTAGAAAAAATGAAAGTAG+AGG - chr4_3:46563099-46563118 Msa0643530:five_prime_UTR 20.0%
!!! GGAACATTTAAAATATTGTA+AGG - chr4_3:46563120-46563139 Msa0643530:five_prime_UTR 20.0%
! GGCTTAAAGATAAGAAAAAA+AGG + chr4_3:46556906-46556925 None:intergenic 25.0%
! GTATAGTATCATGAAAAATG+AGG + chr4_3:46556967-46556986 None:intergenic 25.0%
! AAGTGAAATTCAAAAAGTTG+AGG + chr4_3:46556995-46557014 None:intergenic 25.0%
!!! GTTTGATCATTTTTCAATTG+TGG - chr4_3:46557060-46557079 Msa0643530:three_prime_UTR 25.0%
!! TTTCTCTCCTTTTAAACAAT+TGG - chr4_3:46557388-46557407 Msa0643530:intron 25.0%
! TTCAGTGTAATTATATGTGT+CGG + chr4_3:46557596-46557615 None:intergenic 25.0%
!!! TTTCAAATTTTTAGAGGTGT+CGG - chr4_3:46557627-46557646 Msa0643530:intron 25.0%
! TCAAATTGTGTGTCAAAATA+TGG + chr4_3:46557885-46557904 None:intergenic 25.0%
! GATGGTTAATGAATATAACA+AGG + chr4_3:46558130-46558149 None:intergenic 25.0%
! GATTAACTACATTAAACTGA+TGG + chr4_3:46558148-46558167 None:intergenic 25.0%
! AAATTCGAAAACAACTTAGA+TGG + chr4_3:46558190-46558209 None:intergenic 25.0%
! TAGTATAGTTAGCATTAAAC+TGG + chr4_3:46558360-46558379 None:intergenic 25.0%
! TACTCAAAGTTACTCAAAAT+GGG + chr4_3:46558425-46558444 None:intergenic 25.0%
! GAAGTTTGATTCTTTCTATT+TGG - chr4_3:46558720-46558739 Msa0643530:CDS 25.0%
!! TCTATCTTAGAGTGTTTAAT+AGG + chr4_3:46558852-46558871 None:intergenic 25.0%
! TCCAATTTATGAAAACAATG+TGG - chr4_3:46558977-46558996 Msa0643530:intron 25.0%
!! TCCACATTGTTTTCATAAAT+TGG + chr4_3:46558981-46559000 None:intergenic 25.0%
! ATGTGGAACTTAAATGAAAA+CGG - chr4_3:46558994-46559013 Msa0643530:intron 25.0%
!!! CTAAATCTCCATTTTATTTG+TGG - chr4_3:46559125-46559144 Msa0643530:CDS 25.0%
!!! CTCCTTTTACTTTTTACTAT+AGG - chr4_3:46559152-46559171 Msa0643530:CDS 25.0%
! AAATTTCGCCATATTTATAG+AGG - chr4_3:46559237-46559256 Msa0643530:intron 25.0%
! AATCGATGCACAAAATAATA+TGG - chr4_3:46559305-46559324 Msa0643530:intron 25.0%
! AATATGGTACTAAATTTGTC+AGG - chr4_3:46559321-46559340 Msa0643530:intron 25.0%
! AGTAATGAGTATTTATGGTT+TGG - chr4_3:46559587-46559606 Msa0643530:intron 25.0%
! TATAGTCAAATTTCAAAAGC+AGG - chr4_3:46559717-46559736 Msa0643530:CDS 25.0%
!! TCTTTATTTGACAGTATAGT+TGG + chr4_3:46559794-46559813 None:intergenic 25.0%
! TGATTTGAAAGATACTAGAA+TGG + chr4_3:46559832-46559851 None:intergenic 25.0%
!! GCTTTTATAAATGACTTTGT+AGG - chr4_3:46559857-46559876 Msa0643530:intron 25.0%
!!! TTTATCCTCAGATTTTGATT+TGG - chr4_3:46560112-46560131 Msa0643530:intron 25.0%
! GTTCAAAATGAGAATTGAAA+TGG - chr4_3:46560260-46560279 Msa0643530:intron 25.0%
!! ATTTTACATTACCTTCTTTC+TGG + chr4_3:46560294-46560313 None:intergenic 25.0%
! GTTGATTGGAATAAATGATT+TGG - chr4_3:46560403-46560422 Msa0643530:intron 25.0%
! TCCAAATGATAAAAATGTCA+AGG - chr4_3:46561699-46561718 Msa0643530:intron 25.0%
! CCAAATGATAAAAATGTCAA+GGG - chr4_3:46561700-46561719 Msa0643530:intron 25.0%
! GTAAGTATTCTTCTTCTTTA+TGG - chr4_3:46562102-46562121 Msa0643530:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+TGG - chr4_3:46562538-46562557 Msa0643530:CDS 25.0%
!! TTAAGTTGTTTATCCAAACT+GGG - chr4_3:46562539-46562558 Msa0643530:CDS 25.0%
! CTTCTTCTTTGGTATATATA+TGG + chr4_3:46562627-46562646 None:intergenic 25.0%
! TATATATACCAAAGAAGAAG+TGG - chr4_3:46562627-46562646 Msa0643530:CDS 25.0%
! TTTGAAGGTTCAATAATAAC+TGG + chr4_3:46562712-46562731 None:intergenic 25.0%
!!! AATTGTGTACTCTAGAATTA+TGG - chr4_3:46562990-46563009 Msa0643530:five_prime_UTR 25.0%
!! TTTTATGAATGTGTTTGGTT+TGG - chr4_3:46563057-46563076 Msa0643530:five_prime_UTR 25.0%
!! TTTATGAATGTGTTTGGTTT+GGG - chr4_3:46563058-46563077 Msa0643530:five_prime_UTR 25.0%
! AATATTGTAAGGTGAGAATT+TGG - chr4_3:46563131-46563150 Msa0643530:five_prime_UTR 25.0%
ATTTGTAGGTACATAGAAGA+GGG + chr4_3:46556805-46556824 None:intergenic 30.0%
ATTCCATTATCTCCATTTGT+AGG + chr4_3:46556819-46556838 None:intergenic 30.0%
AATTCAAAAAGTTGAGGCTA+TGG + chr4_3:46556989-46557008 None:intergenic 30.0%
!!! TTCACTTTTTAGAATCCACT+TGG - chr4_3:46557008-46557027 Msa0643530:three_prime_UTR 30.0%
TCTAAACAATGAAGTGATTG+AGG - chr4_3:46557142-46557161 Msa0643530:CDS 30.0%
!! AACCTTTTTCACATTCCTTA+TGG + chr4_3:46557187-46557206 None:intergenic 30.0%
AGATAAGAAGAAGAAACAAG+TGG + chr4_3:46557269-46557288 None:intergenic 30.0%
CTTCTTCTTATCTTGAACTA+TGG - chr4_3:46557276-46557295 Msa0643530:CDS 30.0%
! AATTGTTCTAAATGACCTTG+TGG + chr4_3:46557362-46557381 None:intergenic 30.0%
GGTATCTCCAATTGTTTAAA+AGG + chr4_3:46557398-46557417 None:intergenic 30.0%
GATTAACTACTTTCAGTAGA+TGG - chr4_3:46557919-46557938 Msa0643530:CDS 30.0%
AAAGAACCTAAAAAGTTGAC+CGG + chr4_3:46557960-46557979 None:intergenic 30.0%
ATCTGTTATACTGATGTATC+TGG + chr4_3:46558015-46558034 None:intergenic 30.0%
GAAAAGAACATGATACATGT+TGG + chr4_3:46558263-46558282 None:intergenic 30.0%
TATAGTTAGCATTAAACTGG+TGG + chr4_3:46558357-46558376 None:intergenic 30.0%
CTACTCAAAGTTACTCAAAA+TGG + chr4_3:46558426-46558445 None:intergenic 30.0%
TTTGAGTAACTTTGAGTAGA+TGG - chr4_3:46558427-46558446 Msa0643530:CDS 30.0%
!!! TTTGAGTAGATGGATTGTTT+TGG - chr4_3:46558437-46558456 Msa0643530:CDS 30.0%
AAAGAAGTTGAGGAATTAGA+AGG - chr4_3:46558492-46558511 Msa0643530:CDS 30.0%
TCCTTTGGTATGAAATCTTT+CGG - chr4_3:46558647-46558666 Msa0643530:CDS 30.0%
TTGAGAAATGAGAGACTATT+TGG - chr4_3:46558779-46558798 Msa0643530:CDS 30.0%
TGAGAAATGAGAGACTATTT+GGG - chr4_3:46558780-46558799 Msa0643530:CDS 30.0%
AATAGGCTGAAAACAACTTA+TGG + chr4_3:46558835-46558854 None:intergenic 30.0%
! AATGGAGATTTAGACCTTTT+TGG + chr4_3:46559118-46559137 None:intergenic 30.0%
! AACCAAAAGAATCTTGTTTC+TGG - chr4_3:46559390-46559409 Msa0643530:intron 30.0%
ACCTGAGTAATGAGTATTTA+TGG - chr4_3:46559582-46559601 Msa0643530:intron 30.0%
ACCATAAATACTCATTACTC+AGG + chr4_3:46559586-46559605 None:intergenic 30.0%
!! ATGGTTTGGTACTAATATCA+AGG - chr4_3:46559601-46559620 Msa0643530:intron 30.0%
AAGTATGTTCTTTCCTAGTT+TGG + chr4_3:46559655-46559674 None:intergenic 30.0%
TAATAATCTTTGAATGCCGA+TGG - chr4_3:46559752-46559771 Msa0643530:intron 30.0%
AATCTCAAGTTTGATTCCAT+CGG + chr4_3:46559771-46559790 None:intergenic 30.0%
! GAAAACATGAAACATGCTTT+TGG + chr4_3:46560013-46560032 None:intergenic 30.0%
! TTCATGTTTTCTATAGTCCA+AGG - chr4_3:46560022-46560041 Msa0643530:CDS 30.0%
!! ATGTCAAGAAACTGTTTTGA+AGG + chr4_3:46560345-46560364 None:intergenic 30.0%
ATATTGTCTTCCAATCTTGT+AGG - chr4_3:46560366-46560385 Msa0643530:intron 30.0%
! TTTGATTTAGGCCATCTATA+GGG + chr4_3:46560431-46560450 None:intergenic 30.0%
!!! TTTTGATTTAGGCCATCTAT+AGG + chr4_3:46560432-46560451 None:intergenic 30.0%
ATAGATGGCCTAAATCAAAA+TGG - chr4_3:46560432-46560451 Msa0643530:intron 30.0%
GACCCCAAAATTTATAAACA+CGG - chr4_3:46561050-46561069 Msa0643530:intron 30.0%
! GACCGTGTTTATAAATTTTG+GGG + chr4_3:46561055-46561074 None:intergenic 30.0%
! GGACCGTGTTTATAAATTTT+GGG + chr4_3:46561056-46561075 None:intergenic 30.0%
! AGGACCGTGTTTATAAATTT+TGG + chr4_3:46561057-46561076 None:intergenic 30.0%
GAAAGAATATGATTAGGATC+AGG + chr4_3:46561077-46561096 None:intergenic 30.0%
!! GGTTTTATGTCACTATACTA+TGG - chr4_3:46561190-46561209 Msa0643530:intron 30.0%
AAACATGCAGATTGAAAACT+AGG + chr4_3:46561460-46561479 None:intergenic 30.0%
CACATTATCACTCATGAAAT+TGG + chr4_3:46561539-46561558 None:intergenic 30.0%
! CCCTTGACATTTTTATCATT+TGG + chr4_3:46561703-46561722 None:intergenic 30.0%
TGATAAAAATGTCAAGGGAA+AGG - chr4_3:46561705-46561724 Msa0643530:intron 30.0%
TAGCCAAAATTTACAGAACA+CGG - chr4_3:46561774-46561793 Msa0643530:intron 30.0%
ACTTCTTAGAGATTCTGATA+AGG - chr4_3:46562015-46562034 Msa0643530:intron 30.0%
CTTCTTAGAGATTCTGATAA+GGG - chr4_3:46562016-46562035 Msa0643530:intron 30.0%
TTATAGAAATGATCTGCAGA+GGG - chr4_3:46562388-46562407 Msa0643530:intron 30.0%
!! AGTTTTCTAGTGTTCTGTTT+TGG - chr4_3:46562568-46562587 Msa0643530:CDS 30.0%
! TAGTTAGAGTCTAAAGTTTC+AGG - chr4_3:46562770-46562789 Msa0643530:CDS 30.0%
! AGTTAGAGTCTAAAGTTTCA+GGG - chr4_3:46562771-46562790 Msa0643530:CDS 30.0%
CAGTTAATTGTCAATCTTTC+TGG + chr4_3:46562909-46562928 None:intergenic 30.0%
ACACAATTCTCAAGAGATAT+TGG + chr4_3:46562978-46562997 None:intergenic 30.0%
! GGTTTTCATATTTCATGTCA+TGG - chr4_3:46563014-46563033 Msa0643530:five_prime_UTR 30.0%
TTTCATATTTCATGTCATGG+TGG - chr4_3:46563017-46563036 Msa0643530:five_prime_UTR 30.0%
!! TTATGAATGTGTTTGGTTTG+GGG - chr4_3:46563059-46563078 Msa0643530:five_prime_UTR 30.0%
! ATAGGAAGCACAGAAACAAA+AGG + chr4_3:46556760-46556779 None:intergenic 35.0%
CATTTGTAGGTACATAGAAG+AGG + chr4_3:46556806-46556825 None:intergenic 35.0%
CTCTTCTATGTACCTACAAA+TGG - chr4_3:46556804-46556823 Msa0643530:three_prime_UTR 35.0%
GTACCTACAAATGGAGATAA+TGG - chr4_3:46556813-46556832 Msa0643530:three_prime_UTR 35.0%
TTTCTTGAGAGAGTCTCAAA+TGG + chr4_3:46557097-46557116 None:intergenic 35.0%
AGAAACAAAGACAGTGTTCA+TGG - chr4_3:46557112-46557131 Msa0643530:three_prime_UTR 35.0%
TGCCATAAGGAATGTGAAAA+AGG - chr4_3:46557182-46557201 Msa0643530:CDS 35.0%
! CTTGAAGATGAACAAGTTGA+AGG + chr4_3:46557236-46557255 None:intergenic 35.0%
TCTTAGGAAGTGAAGTAAGA+GGG + chr4_3:46557316-46557335 None:intergenic 35.0%
TTCTTAGGAAGTGAAGTAAG+AGG + chr4_3:46557317-46557336 None:intergenic 35.0%
CTTACTTCACTTCCTAAGAA+AGG - chr4_3:46557317-46557336 Msa0643530:intron 35.0%
ATTGAGTACTTACAAGTAGC+TGG + chr4_3:46557466-46557485 None:intergenic 35.0%
AGTAAACAACCTATGAAGCA+CGG + chr4_3:46557664-46557683 None:intergenic 35.0%
! TTTCTTTTAACAGGCCAACA+AGG - chr4_3:46557723-46557742 Msa0643530:intron 35.0%
ATGGTTAATGAATACTTCCC+CGG - chr4_3:46557938-46557957 Msa0643530:CDS 35.0%
AAGAACCTAAAAAGTTGACC+GGG + chr4_3:46557959-46557978 None:intergenic 35.0%
ACTTCATTAACCACTGTTGA+GGG + chr4_3:46558058-46558077 None:intergenic 35.0%
AACTTCATTAACCACTGTTG+AGG + chr4_3:46558059-46558078 None:intergenic 35.0%
TCCTAGTTAGTTGTGTTTAG+TGG - chr4_3:46558084-46558103 Msa0643530:intron 35.0%
TCCACTAAACACAACTAACT+AGG + chr4_3:46558088-46558107 None:intergenic 35.0%
AGTTAGTTGTGTTTAGTGGA+TGG - chr4_3:46558088-46558107 Msa0643530:intron 35.0%
CTTTCACATCTCAACATTTC+AGG + chr4_3:46558294-46558313 None:intergenic 35.0%
!!! GATTGTTTTGGCTTTTCAGT+TGG - chr4_3:46558449-46558468 Msa0643530:CDS 35.0%
GAATTAGAAGGAGATGATGA+GGG - chr4_3:46558504-46558523 Msa0643530:CDS 35.0%
! TGAAGATTGTTTTCCTCCTT+TGG - chr4_3:46558632-46558651 Msa0643530:CDS 35.0%
GAAAGATTTCATACCAAAGG+AGG + chr4_3:46558648-46558667 None:intergenic 35.0%
ACCGAAAGATTTCATACCAA+AGG + chr4_3:46558651-46558670 None:intergenic 35.0%
GGAGCAATCCACAAATAAAA+TGG + chr4_3:46559136-46559155 None:intergenic 35.0%
! CACCAGAAACAAGATTCTTT+TGG + chr4_3:46559395-46559414 None:intergenic 35.0%
!! GGCACTTCTAGGATATAAAT+AGG + chr4_3:46559464-46559483 None:intergenic 35.0%
TTCTCATTCACAAGAAGTCA+TGG + chr4_3:46559684-46559703 None:intergenic 35.0%
! TGATTACCGACAATTGATTC+TGG + chr4_3:46559943-46559962 None:intergenic 35.0%
GCAACAGATGAAAGGAAATT+GGG + chr4_3:46559976-46559995 None:intergenic 35.0%
TGCAACAGATGAAAGGAAAT+TGG + chr4_3:46559977-46559996 None:intergenic 35.0%
TAGCATTTGCAACAGATGAA+AGG + chr4_3:46559984-46560003 None:intergenic 35.0%
! AACATGAAACATGCTTTTGG+TGG + chr4_3:46560010-46560029 None:intergenic 35.0%
GTTAGTTAGTACTCTTACCT+TGG + chr4_3:46560042-46560061 None:intergenic 35.0%
CACAACCAAATCAAAATCTG+AGG + chr4_3:46560120-46560139 None:intergenic 35.0%
!!! CTCAGATTTTGATTTGGTTG+TGG - chr4_3:46560118-46560137 Msa0643530:intron 35.0%
ATCAAGAATCCAGTGAGTAT+AGG - chr4_3:46560231-46560250 Msa0643530:intron 35.0%
TCAAGAATCCAGTGAGTATA+GGG - chr4_3:46560232-46560251 Msa0643530:intron 35.0%
!!! TGTTTTGAAGGAAGAAATCG+TGG + chr4_3:46560333-46560352 None:intergenic 35.0%
TGTAGTAGTGGTATGTTGAT+TGG - chr4_3:46560389-46560408 Msa0643530:intron 35.0%
! ATGATTTGGATCCCTATAGA+TGG - chr4_3:46560417-46560436 Msa0643530:intron 35.0%
!!! AAGCACCTCCATTTTGATTT+AGG + chr4_3:46560443-46560462 None:intergenic 35.0%
TGACATACAACAGGTAAGAT+GGG - chr4_3:46560671-46560690 Msa0643530:CDS 35.0%
ATCACTGGTATGAATCCTAA+TGG - chr4_3:46560840-46560859 Msa0643530:intron 35.0%
TATGAATCCTAATGGTGAGA+TGG - chr4_3:46560848-46560867 Msa0643530:intron 35.0%
TGCTTAGTACTACATGTATC+AGG - chr4_3:46560883-46560902 Msa0643530:intron 35.0%
GCTTAGTACTACATGTATCA+GGG - chr4_3:46560884-46560903 Msa0643530:intron 35.0%
TACATGTATCAGGGTCTATT+TGG - chr4_3:46560893-46560912 Msa0643530:intron 35.0%
TTTGTTTCATTTATGGCAGC+AGG - chr4_3:46561097-46561116 Msa0643530:intron 35.0%
TTGCAAGGTCAAGAAAATAC+AGG - chr4_3:46561169-46561188 Msa0643530:intron 35.0%
TTCAAGTCATCATCAAAACC+TGG - chr4_3:46561255-46561274 Msa0643530:intron 35.0%
ATTAACACTCATAAGCTCAG+AGG + chr4_3:46561311-46561330 None:intergenic 35.0%
GTTAATCCTTTCAGTTATGC+AGG - chr4_3:46561325-46561344 Msa0643530:CDS 35.0%
ATAAAGCCTGCATAACTGAA+AGG + chr4_3:46561334-46561353 None:intergenic 35.0%
TTTCAGTTATGCAGGCTTTA+TGG - chr4_3:46561333-46561352 Msa0643530:CDS 35.0%
TGGAAAGTAACAACTTTCCA+AGG - chr4_3:46561353-46561372 Msa0643530:CDS 35.0%
GGAAAGTAACAACTTTCCAA+GGG - chr4_3:46561354-46561373 Msa0643530:CDS 35.0%
TGTAAACTGAAATCCCTTTC+AGG - chr4_3:46561397-46561416 Msa0643530:CDS 35.0%
! GAAATCAGCTTTTCCTGAAA+GGG + chr4_3:46561413-46561432 None:intergenic 35.0%
! TGAAATCAGCTTTTCCTGAA+AGG + chr4_3:46561414-46561433 None:intergenic 35.0%
! GGAAAAGCTGATTTCAACAT+CGG - chr4_3:46561418-46561437 Msa0643530:CDS 35.0%
! CAATCTGCATGTTTTCCTTA+CGG - chr4_3:46561466-46561485 Msa0643530:intron 35.0%
GGGAACATTAGAAAAGAAGT+TGG - chr4_3:46561586-46561605 Msa0643530:intron 35.0%
AGAAAAGAAGTTGGAAGATC+TGG - chr4_3:46561595-46561614 Msa0643530:intron 35.0%
TTTCTGCTTCTGCTTCATTA+GGG - chr4_3:46561659-46561678 Msa0643530:intron 35.0%
GCAAATTCCTGCAAACTATT+CGG - chr4_3:46561727-46561746 Msa0643530:intron 35.0%
!!! TTCTGTAAATTTTGGCTACC+AGG + chr4_3:46561772-46561791 None:intergenic 35.0%
! TTGCCGTGTTCTGTAAATTT+TGG + chr4_3:46561780-46561799 None:intergenic 35.0%
ATTTACAGAACACGGCAAAA+AGG - chr4_3:46561782-46561801 Msa0643530:intron 35.0%
TAAATGAAGGTTCACAAGCA+AGG - chr4_3:46561902-46561921 Msa0643530:intron 35.0%
AGTGAACTGGAGAAACTATT+TGG - chr4_3:46561983-46562002 Msa0643530:intron 35.0%
TTAGAGATTCTGATAAGGGA+TGG - chr4_3:46562020-46562039 Msa0643530:intron 35.0%
TGACAGTGAGAATGACATAA+TGG - chr4_3:46562057-46562076 Msa0643530:intron 35.0%
TGAGAATGACATAATGGTTG+TGG - chr4_3:46562063-46562082 Msa0643530:intron 35.0%
GAGAATGACATAATGGTTGT+GGG - chr4_3:46562064-46562083 Msa0643530:intron 35.0%
AGAATGACATAATGGTTGTG+GGG - chr4_3:46562065-46562084 Msa0643530:intron 35.0%
AAGAAGAATACTTACTGCCA+TGG + chr4_3:46562097-46562116 None:intergenic 35.0%
! ACTGTTTTCATAAGCTATCC+TGG + chr4_3:46562332-46562351 None:intergenic 35.0%
GTTATAGAAATGATCTGCAG+AGG - chr4_3:46562387-46562406 Msa0643530:intron 35.0%
GAAAACTTAAATGCCCAGTT+TGG + chr4_3:46562555-46562574 None:intergenic 35.0%
AAGTGGAGAAGATGACATTT+GGG - chr4_3:46562644-46562663 Msa0643530:CDS 35.0%
ACAGCTATGAGTATCATCAT+TGG + chr4_3:46562677-46562696 None:intergenic 35.0%
TGATGATACTCATAGCTGTT+TGG - chr4_3:46562678-46562697 Msa0643530:CDS 35.0%
ACTACTGTTGGAGAATAATC+TGG + chr4_3:46562754-46562773 None:intergenic 35.0%
CTTTAGACTCTAACTACTGT+TGG + chr4_3:46562766-46562785 None:intergenic 35.0%
TTAGCTCAGCAAAAATTGCA+TGG - chr4_3:46562877-46562896 Msa0643530:five_prime_UTR 35.0%
! CACTAAATAAGTGCTAGTCT+TGG - chr4_3:46562929-46562948 Msa0643530:five_prime_UTR 35.0%
!! TGTGTACTCTAGAATTATGG+TGG - chr4_3:46562993-46563012 Msa0643530:five_prime_UTR 35.0%
AGAATTTGGTAAATGCACTC+TGG - chr4_3:46563145-46563164 Msa0643530:five_prime_UTR 35.0%
AAGGCAAGTAAAGCCAATGT+GGG + chr4_3:46556741-46556760 None:intergenic 40.0%
AAAGGCAAGTAAAGCCAATG+TGG + chr4_3:46556742-46556761 None:intergenic 40.0%
GAAGACAGAGACAATTGCAT+AGG + chr4_3:46556778-46556797 None:intergenic 40.0%
GAAGAATGCATTGTGCCATA+AGG - chr4_3:46557169-46557188 Msa0643530:CDS 40.0%
TCCTAAGAAAGGAAATGCTG+TGG - chr4_3:46557328-46557347 Msa0643530:intron 40.0%
ACCACAGCATTTCCTTTCTT+AGG + chr4_3:46557332-46557351 None:intergenic 40.0%
TGAGGCTGAAGATCATAGTT+TGG + chr4_3:46557419-46557438 None:intergenic 40.0%
TTCTCAAGTTAGACTTGTCC+CGG - chr4_3:46557534-46557553 Msa0643530:intron 40.0%
AACCTCATCATTCTCCTTGT+TGG + chr4_3:46557740-46557759 None:intergenic 40.0%
AGAACCTAAAAAGTTGACCG+GGG + chr4_3:46557958-46557977 None:intergenic 40.0%
CTTCATTAACCACTGTTGAG+GGG + chr4_3:46558057-46558076 None:intergenic 40.0%
GAGATGTGAAAGTTAACGAG+TGG - chr4_3:46558302-46558321 Msa0643530:CDS 40.0%
!!! TTTTGGCTTTTCAGTTGGCA+GGG - chr4_3:46558454-46558473 Msa0643530:CDS 40.0%
TATGGAGGGAAAAGAAGTTG+AGG - chr4_3:46558482-46558501 Msa0643530:CDS 40.0%
GGAATTAGAAGGAGATGATG+AGG - chr4_3:46558503-46558522 Msa0643530:CDS 40.0%
TAAATTTGTCAGGTCAGCCA+AGG - chr4_3:46559331-46559350 Msa0643530:intron 40.0%
AAGGTATGTGTGTTTGTGCA+TGG - chr4_3:46559431-46559450 Msa0643530:intron 40.0%
TGAATGTCACGTACCAAACT+AGG - chr4_3:46559639-46559658 Msa0643530:CDS 40.0%
TGACTTTGTAGGGGTGAAAA+TGG - chr4_3:46559868-46559887 Msa0643530:intron 40.0%
TGAAAATGGAGAGCTGAGAT+TGG - chr4_3:46559882-46559901 Msa0643530:CDS 40.0%
GAAAATGGAGAGCTGAGATT+GGG - chr4_3:46559883-46559902 Msa0643530:CDS 40.0%
AGAGCAGTTAGACCTAGAAA+TGG - chr4_3:46559913-46559932 Msa0643530:CDS 40.0%
! GATTCTGGAAGACCATTTCT+AGG + chr4_3:46559928-46559947 None:intergenic 40.0%
GGTCTTCCAGAATCAATTGT+CGG - chr4_3:46559934-46559953 Msa0643530:CDS 40.0%
!! CATGACTTGCTCTGTAACAT+GGG + chr4_3:46560173-46560192 None:intergenic 40.0%
TGGATGAATCACCAGAAAGA+AGG - chr4_3:46560280-46560299 Msa0643530:intron 40.0%
CACTACTACACCTACAAGAT+TGG + chr4_3:46560379-46560398 None:intergenic 40.0%
CAATCTTGTAGGTGTAGTAG+TGG - chr4_3:46560377-46560396 Msa0643530:intron 40.0%
GATGGCCTAAATCAAAATGG+AGG - chr4_3:46560435-46560454 Msa0643530:intron 40.0%
!! ATCAAAATGGAGGTGCTTGA+TGG - chr4_3:46560445-46560464 Msa0643530:intron 40.0%
AGCTTTCTGTGACATACAAC+AGG - chr4_3:46560662-46560681 Msa0643530:intron 40.0%
GTGACATACAACAGGTAAGA+TGG - chr4_3:46560670-46560689 Msa0643530:CDS 40.0%
ATACCAGTGATGAGGTGATT+GGG + chr4_3:46560831-46560850 None:intergenic 40.0%
TAGGATTCATACCAGTGATG+AGG + chr4_3:46560839-46560858 None:intergenic 40.0%
AAGCATACCATCTCACCATT+AGG + chr4_3:46560858-46560877 None:intergenic 40.0%
TGATTTCAACATCGGAGCTT+GGG - chr4_3:46561426-46561445 Msa0643530:CDS 40.0%
TGCAGATTGAAAACTAGGCT+TGG + chr4_3:46561455-46561474 None:intergenic 40.0%
GCTTTGTCAATATCTCCGTA+AGG + chr4_3:46561484-46561503 None:intergenic 40.0%
ACTATCGATGGCGTGTTAAA+CGG + chr4_3:46561562-46561581 None:intergenic 40.0%
GTTTCTGCTTCTGCTTCATT+AGG - chr4_3:46561658-46561677 Msa0643530:intron 40.0%
TTCTGCTTCTGCTTCATTAG+GGG - chr4_3:46561660-46561679 Msa0643530:intron 40.0%
TTCTGCTTCATTAGGGGATA+CGG - chr4_3:46561666-46561685 Msa0643530:intron 40.0%
CAATGATCTTCTGAGTGAAC+TGG - chr4_3:46561970-46561989 Msa0643530:intron 40.0%
ACTGGAGAAACTATTTGGCA+TGG - chr4_3:46561988-46562007 Msa0643530:intron 40.0%
GAGAAACTATTTGGCATGGA+AGG - chr4_3:46561992-46562011 Msa0643530:intron 40.0%
CATTCTCACTGTCAGTGTAA+AGG + chr4_3:46562051-46562070 None:intergenic 40.0%
GAATGACATAATGGTTGTGG+GGG - chr4_3:46562066-46562085 Msa0643530:intron 40.0%
GAAATGTCTTTAAGCTCTCC+AGG - chr4_3:46562311-46562330 Msa0643530:intron 40.0%
ACTAAGCAGAGTTGACTACA+TGG + chr4_3:46562457-46562476 None:intergenic 40.0%
TTAGTGCGATAAGGCTTAGT+TGG - chr4_3:46562472-46562491 Msa0643530:CDS 40.0%
!!! GGCTGGTTTTGTCATAGAAA+TGG - chr4_3:46562497-46562516 Msa0643530:CDS 40.0%
!! TTGCAGTGAGTTTTGTGATG+TGG - chr4_3:46562591-46562610 Msa0643530:CDS 40.0%
CATCTTCTCCACTTCTTCTT+TGG + chr4_3:46562638-46562657 None:intergenic 40.0%
GAAGTGGAGAAGATGACATT+TGG - chr4_3:46562643-46562662 Msa0643530:CDS 40.0%
TACTCATAGCTGTTTGGATC+AGG - chr4_3:46562684-46562703 Msa0643530:CDS 40.0%
CTAAAGTTTCAGGGTTGTGT+TGG - chr4_3:46562780-46562799 Msa0643530:exon 40.0%
CTGAGCTAACTAGCTCAAAA+GGG + chr4_3:46562866-46562885 None:intergenic 40.0%
!! TAAGTGCTAGTCTTGGAAGT+TGG - chr4_3:46562936-46562955 Msa0643530:five_prime_UTR 40.0%
! GAAAAAAGGGTGTGACCAAG+TGG + chr4_3:46557026-46557045 None:intergenic 45.0%
! GCTGTGGTGTATTTTCCACA+AGG - chr4_3:46557344-46557363 Msa0643530:intron 45.0%
! TTCAGCCTCAGATCTTTTGC+AGG - chr4_3:46557429-46557448 Msa0643530:intron 45.0%
! TCAGCCTCAGATCTTTTGCA+GGG - chr4_3:46557430-46557449 Msa0643530:intron 45.0%
ACAACCCTGCAAAAGATCTG+AGG + chr4_3:46557437-46557456 None:intergenic 45.0%
!! GAGAAGTGTTCGTGCTTCAT+AGG + chr4_3:46557519-46557538 None:intergenic 45.0%
!! TATATGTGTCGGTGTCGTGT+CGG + chr4_3:46557585-46557604 None:intergenic 45.0%
CAACCTATGAAGCACGGATA+CGG + chr4_3:46557658-46557677 None:intergenic 45.0%
ACAAGTTACTCTGCTACCTC+AGG - chr4_3:46557765-46557784 Msa0643530:intron 45.0%
! ACTTCCCCGGTCAACTTTTT+AGG - chr4_3:46557951-46557970 Msa0643530:CDS 45.0%
ATTAACGATCCCCTCAACAG+TGG - chr4_3:46558045-46558064 Msa0643530:intron 45.0%
GTGAAAGTTAACGAGTGGAG+TGG - chr4_3:46558307-46558326 Msa0643530:CDS 45.0%
AAAGTTAACGAGTGGAGTGG+CGG - chr4_3:46558310-46558329 Msa0643530:CDS 45.0%
!!! GTTTTGGCTTTTCAGTTGGC+AGG - chr4_3:46558453-46558472 Msa0643530:CDS 45.0%
TGTCTTGCAGAACATGTGAG+GGG + chr4_3:46558556-46558575 None:intergenic 45.0%
GTGTCTTGCAGAACATGTGA+GGG + chr4_3:46558557-46558576 None:intergenic 45.0%
AGTGTCTTGCAGAACATGTG+AGG + chr4_3:46558558-46558577 None:intergenic 45.0%
TTGGCAACAAGCTCTTGAGA+GGG + chr4_3:46559195-46559214 None:intergenic 45.0%
TTTGGCAACAAGCTCTTGAG+AGG + chr4_3:46559196-46559215 None:intergenic 45.0%
GTGATGCAGTGCTCTTTCTA+AGG - chr4_3:46559412-46559431 Msa0643530:intron 45.0%
!! GCATGACTTGCTCTGTAACA+TGG + chr4_3:46560174-46560193 None:intergenic 45.0%
ATCCAGTGAGTATAGGGACA+AGG - chr4_3:46560238-46560257 Msa0643530:intron 45.0%
AACCTTGTCCCTATACTCAC+TGG + chr4_3:46560243-46560262 None:intergenic 45.0%
ACAACAGGTAAGATGGGATG+AGG - chr4_3:46560677-46560696 Msa0643530:CDS 45.0%
TGGGGAAGACTGAATGCTTA+GGG + chr4_3:46560769-46560788 None:intergenic 45.0%
TTGGGGAAGACTGAATGCTT+AGG + chr4_3:46560770-46560789 None:intergenic 45.0%
CATACCAGTGATGAGGTGAT+TGG + chr4_3:46560832-46560851 None:intergenic 45.0%
TTTATGGCAGCAGGAATCAG+TGG - chr4_3:46561106-46561125 Msa0643530:intron 45.0%
AGCAGGAATCAGTGGAATGA+TGG - chr4_3:46561114-46561133 Msa0643530:intron 45.0%
GCAGGAATCAGTGGAATGAT+GGG - chr4_3:46561115-46561134 Msa0643530:intron 45.0%
GGAGTCAGTAAGATCACCAA+AGG - chr4_3:46561144-46561163 Msa0643530:intron 45.0%
AGATCACCAAAGGTCTTGCA+AGG - chr4_3:46561154-46561173 Msa0643530:intron 45.0%
TCTTGACCTTGCAAGACCTT+TGG + chr4_3:46561163-46561182 None:intergenic 45.0%
! GAAGTGCTCAACTCAAAACC+TGG + chr4_3:46561238-46561257 None:intergenic 45.0%
CATCAAAACCTGGCATCAAC+TGG - chr4_3:46561265-46561284 Msa0643530:intron 45.0%
AACCTGGCATCAACTGGAAT+AGG - chr4_3:46561271-46561290 Msa0643530:CDS 45.0%
! TTCCTATTCCAGTTGATGCC+AGG + chr4_3:46561276-46561295 None:intergenic 45.0%
AACTTTCCAAGGGTCTTGCA+AGG - chr4_3:46561364-46561383 Msa0643530:CDS 45.0%
CTGATTTCAACATCGGAGCT+TGG - chr4_3:46561425-46561444 Msa0643530:CDS 45.0%
GATTTCAACATCGGAGCTTG+GGG - chr4_3:46561427-46561446 Msa0643530:CDS 45.0%
GTTTAACACGCCATCGATAG+TGG - chr4_3:46561561-46561580 Msa0643530:intron 45.0%
! AGGAAAGCCGAATAGTTTGC+AGG + chr4_3:46561737-46561756 None:intergenic 45.0%
CTATTCGGCTTTCCTTTGTC+TGG - chr4_3:46561742-46561761 Msa0643530:intron 45.0%
GGCAAAAAGGAGTTGCACAA+AGG - chr4_3:46561795-46561814 Msa0643530:intron 45.0%
AAAGGAGTTGCACAAAGGTG+AGG - chr4_3:46561800-46561819 Msa0643530:intron 45.0%
AAGGAGTTGCACAAAGGTGA+GGG - chr4_3:46561801-46561820 Msa0643530:intron 45.0%
CACAAGCAAGGAAGCTTAGT+TGG - chr4_3:46561914-46561933 Msa0643530:intron 45.0%
! ATTGACCTCTCTAGGTTGAG+CGG - chr4_3:46561944-46561963 Msa0643530:intron 45.0%
GAGATTCTGATAAGGGATGG+AGG - chr4_3:46562023-46562042 Msa0643530:intron 45.0%
CAACTCTGCTTAGTGCGATA+AGG - chr4_3:46562463-46562482 Msa0643530:CDS 45.0%
TGCGATAAGGCTTAGTTGGT+TGG - chr4_3:46562476-46562495 Msa0643530:CDS 45.0%
ATAAGGCTTAGTTGGTTGGC+TGG - chr4_3:46562480-46562499 Msa0643530:CDS 45.0%
CCAACTGAGGAAGACTTTGA+AGG + chr4_3:46562727-46562746 None:intergenic 45.0%
CCTTCAAAGTCTTCCTCAGT+TGG - chr4_3:46562724-46562743 Msa0643530:CDS 45.0%
ATAATCTGGCTGACCAACTG+AGG + chr4_3:46562740-46562759 None:intergenic 45.0%
GCTGAGCTAACTAGCTCAAA+AGG + chr4_3:46562867-46562886 None:intergenic 45.0%
!! TGAATGTGTTTGGTTTGGGG+TGG - chr4_3:46563062-46563081 Msa0643530:five_prime_UTR 45.0%
!! GTTTGGTTTGGGGTGGAATT+TGG - chr4_3:46563069-46563088 Msa0643530:five_prime_UTR 45.0%
GAACTATGGCATGCTTGTGC+TGG - chr4_3:46557290-46557309 Msa0643530:CDS 50.0%
AGTTAGACTTGTCCCGGTGT+CGG - chr4_3:46557540-46557559 Msa0643530:intron 50.0%
! TGTCGTGTCGGTATCTGACA+CGG + chr4_3:46557573-46557592 None:intergenic 50.0%
TGTCCGTATCCGTGCTTCAT+AGG - chr4_3:46557652-46557671 Msa0643530:intron 50.0%
GGCCAACAAGGAGAATGATG+AGG - chr4_3:46557735-46557754 Msa0643530:intron 50.0%
AAAAAACCAACCTCGGCCTG+AGG + chr4_3:46557784-46557803 None:intergenic 50.0%
TCAGTTGGCAGGGATGCATA+TGG - chr4_3:46558464-46558483 Msa0643530:CDS 50.0%
TTGGCAGGGATGCATATGGA+GGG - chr4_3:46558468-46558487 Msa0643530:CDS 50.0%
GAAGGAGATGATGAGGGAGA+TGG - chr4_3:46558510-46558529 Msa0643530:CDS 50.0%
GAGATGATGAGGGAGATGGA+GGG - chr4_3:46558514-46558533 Msa0643530:CDS 50.0%
GTCTCTGATACGAGCACTCA+TGG - chr4_3:46558582-46558601 Msa0643530:CDS 50.0%
TCTGATACGAGCACTCATGG+TGG - chr4_3:46558585-46558604 Msa0643530:CDS 50.0%
CAATCTTCAGCAGCTCTACG+AGG + chr4_3:46558621-46558640 None:intergenic 50.0%
CTTGTTGCCAAAGACCTGCA+TGG - chr4_3:46559204-46559223 Msa0643530:CDS 50.0%
ATTTCCACTCCACACCATGC+AGG + chr4_3:46559221-46559240 None:intergenic 50.0%
ATTTGTCAGGTCAGCCAAGG+CGG - chr4_3:46559334-46559353 Msa0643530:intron 50.0%
!! TAAGCTGAGAGGGCACTTCT+AGG + chr4_3:46559475-46559494 None:intergenic 50.0%
AAGTGCCCTCTCAGCTTACA+GGG - chr4_3:46559477-46559496 Msa0643530:CDS 50.0%
TACCTTCTCCAGACCTCACT+TGG - chr4_3:46559518-46559537 Msa0643530:intron 50.0%
GAAGACTGAATGCTTAGGGG+AGG + chr4_3:46560765-46560784 None:intergenic 50.0%
GGGGAAGACTGAATGCTTAG+GGG + chr4_3:46560768-46560787 None:intergenic 50.0%
TCCGCGGTTTCTTCAGTCTT+GGG + chr4_3:46560788-46560807 None:intergenic 50.0%
AGTGATGAGGTGATTGGGTG+AGG + chr4_3:46560826-46560845 None:intergenic 50.0%
TCACCCAATCACCTCATCAC+TGG - chr4_3:46560825-46560844 Msa0643530:intron 50.0%
!! CAGTGGAATGATGGGCTTTG+AGG - chr4_3:46561123-46561142 Msa0643530:intron 50.0%
GACAAAGTAACCAACCAGCC+AGG - chr4_3:46561217-46561236 Msa0643530:intron 50.0%
CAACTCAAAACCTGGCTGGT+TGG + chr4_3:46561230-46561249 None:intergenic 50.0%
TGCTCAACTCAAAACCTGGC+TGG + chr4_3:46561234-46561253 None:intergenic 50.0%
TCTTGACCTTGCAAGACCCT+TGG + chr4_3:46561373-46561392 None:intergenic 50.0%
ATGTTCCCTGCCACTATCGA+TGG + chr4_3:46561574-46561593 None:intergenic 50.0%
CCTGCAGCTTATGCTCATCT+GGG + chr4_3:46561633-46561652 None:intergenic 50.0%
TCCTGCAGCTTATGCTCATC+TGG + chr4_3:46561634-46561653 None:intergenic 50.0%
TTTCCTTTGTCTGGCGAACC+TGG - chr4_3:46561751-46561770 Msa0643530:intron 50.0%
GAAGAGCCATTGACCTCTCT+AGG - chr4_3:46561936-46561955 Msa0643530:intron 50.0%
GCTCAACCTAGAGAGGTCAA+TGG + chr4_3:46561945-46561964 None:intergenic 50.0%
! TTAACGAGTGGAGTGGCGGA+GGG - chr4_3:46558314-46558333 Msa0643530:CDS 55.0%
GTTGGCAGGGATGCATATGG+AGG - chr4_3:46558467-46558486 Msa0643530:CDS 55.0%
GGAGATGATGAGGGAGATGG+AGG - chr4_3:46558513-46558532 Msa0643530:CDS 55.0%
TGCCAAAGACCTGCATGGTG+TGG - chr4_3:46559209-46559228 Msa0643530:CDS 55.0%
CTCCACACCATGCAGGTCTT+TGG + chr4_3:46559214-46559233 None:intergenic 55.0%
AAGACCTGCATGGTGTGGAG+TGG - chr4_3:46559214-46559233 Msa0643530:CDS 55.0%
GTTGTGAGTAGATGCCGCCT+TGG + chr4_3:46559351-46559370 None:intergenic 55.0%
AGGCGGCATCTACTCACAAC+TGG - chr4_3:46559351-46559370 Msa0643530:intron 55.0%
GGCATCTACTCACAACTGGC+TGG - chr4_3:46559355-46559374 Msa0643530:intron 55.0%
! GAAGTGCCCTCTCAGCTTAC+AGG - chr4_3:46559476-46559495 Msa0643530:CDS 55.0%
AGTGCCCTCTCAGCTTACAG+GGG - chr4_3:46559478-46559497 Msa0643530:CDS 55.0%
TTGCCCCCTGTAAGCTGAGA+GGG + chr4_3:46559485-46559504 None:intergenic 55.0%
CACCAAGTGAGGTCTGGAGA+AGG + chr4_3:46559523-46559542 None:intergenic 55.0%
CTTCTCCAGACCTCACTTGG+TGG - chr4_3:46559521-46559540 Msa0643530:intron 55.0%
TGAATGCTTAGGGGAGGCTG+AGG + chr4_3:46560759-46560778 None:intergenic 55.0%
CCGCGGTTTCTTCAGTCTTG+GGG + chr4_3:46560787-46560806 None:intergenic 55.0%
CCCCAAGACTGAAGAAACCG+CGG - chr4_3:46560784-46560803 Msa0643530:intron 55.0%
GTCCGCGGTTTCTTCAGTCT+TGG + chr4_3:46560789-46560808 None:intergenic 55.0%
AGACTGAAGAAACCGCGGAC+CGG - chr4_3:46560789-46560808 Msa0643530:intron 55.0%
GGGTGAGGTAACCAGTAGAC+CGG + chr4_3:46560811-46560830 None:intergenic 55.0%
! AACACGCCATCGATAGTGGC+AGG - chr4_3:46561565-46561584 Msa0643530:intron 55.0%
! ACACGCCATCGATAGTGGCA+GGG - chr4_3:46561566-46561585 Msa0643530:intron 55.0%
GCAGCTTATGCTCATCTGGG+AGG + chr4_3:46561630-46561649 None:intergenic 55.0%
CCCAGATGAGCATAAGCTGC+AGG - chr4_3:46561630-46561649 Msa0643530:intron 55.0%
CTACCAGGTTCGCCAGACAA+AGG + chr4_3:46561757-46561776 None:intergenic 55.0%
TGTAGCCGCTCAACCTAGAG+AGG + chr4_3:46561952-46561971 None:intergenic 55.0%
TGGTTGTGGGGGATGATCCA+TGG - chr4_3:46562077-46562096 Msa0643530:intron 55.0%
TACTCTGCTACCTCAGGCCG+AGG - chr4_3:46557771-46557790 Msa0643530:intron 60.0%
GTTAACGAGTGGAGTGGCGG+AGG - chr4_3:46558313-46558332 Msa0643530:CDS 60.0%
GTGCCCTCTCAGCTTACAGG+GGG - chr4_3:46559479-46559498 Msa0643530:CDS 60.0%
CTTGCCCCCTGTAAGCTGAG+AGG + chr4_3:46559486-46559505 None:intergenic 60.0%
GGCTTCCACCAAGTGAGGTC+TGG + chr4_3:46559529-46559548 None:intergenic 60.0%
GTAACGCAGTCTAGTGCGCG+AGG + chr4_3:46559550-46559569 None:intergenic 60.0%
GTAACCAGTAGACCGGTCCG+CGG + chr4_3:46560804-46560823 None:intergenic 60.0%
ACACGGCACGTGTCCGACAC+CGG + chr4_3:46557556-46557575 None:intergenic 65.0%
CTGCTACCTCAGGCCGAGGT+TGG - chr4_3:46557775-46557794 Msa0643530:intron 65.0%
CGCGAGGCTTCCACCAAGTG+AGG + chr4_3:46559534-46559553 None:intergenic 65.0%
GAAACCGCGGACCGGTCTAC+TGG - chr4_3:46560797-46560816 Msa0643530:intron 65.0%
CACGGCACGTGTCCGACACC+GGG + chr4_3:46557555-46557574 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 46556738 46563184 46556738 ID=Msa0643530;Name=Msa0643530
chr4_3 mRNA 46556738 46563184 46556738 ID=Msa0643530-mRNA-1;Parent=Msa0643530;Name=Msa0643530-mRNA-1;_AED=0.08;_eAED=0.08;_QI=393|0.90|1|1|1|1|12|401|793
chr4_3 exon 46556738 46557325 46556738 ID=Msa0643530-mRNA-1:exon:10875;Parent=Msa0643530-mRNA-1
chr4_3 exon 46557821 46558011 46557821 ID=Msa0643530-mRNA-1:exon:10874;Parent=Msa0643530-mRNA-1
chr4_3 exon 46558106 46558806 46558106 ID=Msa0643530-mRNA-1:exon:10873;Parent=Msa0643530-mRNA-1
chr4_3 exon 46559061 46559238 46559061 ID=Msa0643530-mRNA-1:exon:10872;Parent=Msa0643530-mRNA-1
chr4_3 exon 46559456 46559534 46559456 ID=Msa0643530-mRNA-1:exon:10871;Parent=Msa0643530-mRNA-1
chr4_3 exon 46559621 46559740 46559621 ID=Msa0643530-mRNA-1:exon:10870;Parent=Msa0643530-mRNA-1
chr4_3 exon 46559879 46560043 46559879 ID=Msa0643530-mRNA-1:exon:10869;Parent=Msa0643530-mRNA-1
chr4_3 exon 46560489 46560579 46560489 ID=Msa0643530-mRNA-1:exon:10868;Parent=Msa0643530-mRNA-1
chr4_3 exon 46560664 46560748 46560664 ID=Msa0643530-mRNA-1:exon:10867;Parent=Msa0643530-mRNA-1
chr4_3 exon 46561269 46561454 46561269 ID=Msa0643530-mRNA-1:exon:10866;Parent=Msa0643530-mRNA-1
chr4_3 exon 46562130 46562186 46562130 ID=Msa0643530-mRNA-1:exon:10865;Parent=Msa0643530-mRNA-1
chr4_3 exon 46562450 46563184 46562450 ID=Msa0643530-mRNA-1:exon:10864;Parent=Msa0643530-mRNA-1
chr4_3 five_prime_UTR 46562792 46563184 46562792 ID=Msa0643530-mRNA-1:five_prime_utr;Parent=Msa0643530-mRNA-1
chr4_3 CDS 46562450 46562791 46562450 ID=Msa0643530-mRNA-1:cds;Parent=Msa0643530-mRNA-1
chr4_3 CDS 46562130 46562186 46562130 ID=Msa0643530-mRNA-1:cds;Parent=Msa0643530-mRNA-1
chr4_3 CDS 46561269 46561454 46561269 ID=Msa0643530-mRNA-1:cds;Parent=Msa0643530-mRNA-1
chr4_3 CDS 46560664 46560748 46560664 ID=Msa0643530-mRNA-1:cds;Parent=Msa0643530-mRNA-1
chr4_3 CDS 46560489 46560579 46560489 ID=Msa0643530-mRNA-1:cds;Parent=Msa0643530-mRNA-1
chr4_3 CDS 46559879 46560043 46559879 ID=Msa0643530-mRNA-1:cds;Parent=Msa0643530-mRNA-1
chr4_3 CDS 46559621 46559740 46559621 ID=Msa0643530-mRNA-1:cds;Parent=Msa0643530-mRNA-1
chr4_3 CDS 46559456 46559534 46559456 ID=Msa0643530-mRNA-1:cds;Parent=Msa0643530-mRNA-1
chr4_3 CDS 46559061 46559238 46559061 ID=Msa0643530-mRNA-1:cds;Parent=Msa0643530-mRNA-1
chr4_3 CDS 46558106 46558806 46558106 ID=Msa0643530-mRNA-1:cds;Parent=Msa0643530-mRNA-1
chr4_3 CDS 46557821 46558011 46557821 ID=Msa0643530-mRNA-1:cds;Parent=Msa0643530-mRNA-1
chr4_3 CDS 46557139 46557325 46557139 ID=Msa0643530-mRNA-1:cds;Parent=Msa0643530-mRNA-1
chr4_3 three_prime_UTR 46556738 46557138 46556738 ID=Msa0643530-mRNA-1:three_prime_utr;Parent=Msa0643530-mRNA-1
Gene Sequence

>Msa0643530

ATGGAAATTGATCTAAACAATGAAGTGATTGAGGTTGAGAAGAATGCATTGTGCCATAAGGAATGTGAAAAAGGTTTTTGTTTCTGTGTTTCTTGTTTGTCTCCTTCAACTTGTTCATCTTCAAGTTCAACTTCACCACTTGTTTCTTCTTCTTATCTTGAACTATGGCATGCTTGTGCTGGCCCTCTTACTTCACTTCCTAAGAAAGGAAATGCTGTGGTGTATTTTCCACAAGGTCATTTAGAACAATTTGCTTCTTTCTCTCCTTTTAAACAATTGGAGATACCAAACTATGATCTTCAGCCTCAGATCTTTTGCAGGGTTGTCAATGTCCAGCTACTTGCCAACAAGGAGAATGATGAGGTTTATACACAAGTTACTCTGCTACCTCAGGCCGAGTTGGCAGGGATGCATATGGAGGGAAAAGAAGTTGAGGAATTAGAAGGAGATGATGAGGGAGATGGAGGGTCACTTACAAAATCAACCCCTCACATGTTCTGCAAGACACTAACTGTCTCTGATACGAGCACTCATGGTGGATTCTCTGTGCCTCGTAGAGCTGCTGAAGATTGTTTTCCTCCTTTGGATTATAAGCTGCAGAGACCCTCTCAAGAGCTTGTTGCCAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTATAGAGGTCAGCCAAGGCGGCATCTACTCACAACTGGCTGGAGCATTTTTGTGAACCAAAAGAATCTTGTTTCTGGTGATGCAGTGCTCTTTCTAAGGGGTGAAAATGGAGAGCTGAGATTGGGAATCAGAAGAGCAGTTAGACCTAGAAATGGTCTTCCAGAATCAATTGTCGGTAATCAGAATTGTTATCCCAATTTCCTTTCATCTGTTGCAAATGCTATATCCACCAAAAGCATGTTTCATGTTTTCTATAGTCCAAGAGCAAGTCATGCAGAGTTTGTTGTTCCGTACCAAAAATATGTTAAAAGCATCAAGAATCCAGTGAGTATAGGGACAAGGTTCAAAATGAGAATTGAAATGGATGAATCACCAGAAAGAAGGTGTAGTAGTGGTATGTTGATTGGAATAAATGATTTGGATCCCTATAGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTAAGATGGGATGAGGATACTGAGACTAATCATCAAGACCGAGTATCGCCATGGGAGATCGATCTTTCTTCTCCTCAGCCTCCCCTAAGCATTCAGTCTTCCCCAAGACTGAAGAAACCGCGGACCGGTCTACTGGTTACCTCACCCAATCACCTCATCACTGGTATGAATCCTAATGCAGGAATCAGTGGAATGATGGGCTTTGAGGAGTCAGTAAGATCACCAAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTATGTCACTATACTATGGATGTGACAAAGTAACCAACCAGCCAGGTTTTGAGTTGAGCACTTCAAGTCATCATCAAAACCTGGCATCAACTGGAATAGGAAAAGTAGTTACATCCTCTGAGCTTATGAGTGTTAATCCTTTCAGTTATGCAGGCTTTATGGAAAGTAACAACTTTCCAAGGGTCTTGCAAGGTCAAGAAATATGTAAACTGAAATCCCTTTCAGGAAAAGCTGATTTCAACATCGGAGCTTGGGGAACCAAGCCTAGTTTTCAATCTGCATGTTTTCCTTACGGAGATATTGACAAAGCTAATCAAGCTAATATTTTTAGCTCAAAACACACCAATTTCATGAGTGATAATGTGCCGTTTAACACGCCATCGATAGTGGCAGGGAACATTAGAAAAGAAGTTGGAAGATCTGGATCTAATCTCCTCCCAGATGAGCATAAGCTGCAGGACAATGTTTCTGCTTCTGCTTCATTAGGGGATACGGATATAAATGCTCCAAATGATAAAAATGTCAAGGGAAAGGCAAATTCCTGCAAACTATTCGGCTTTCCTTTGTCTGGCGAACCTGGTAGCCAAAATTTACAGAACACGGCAAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGAAGCTTAGTTGGAAGAGCCATTGACCTCTCTAGGTTGAGCGGCTACAATGATCTTCTGAGTGAACTGGAGAAACTATTTGGCATGGAAGGACTTCTTAGAGATTCTGATAAGGGATGGAGGATCCTTTACACTGACAGTGAGAATGACATAATGGTTGTGGGGGATGATCCATGGCATGAGTTTTGTGATGTGGTGTCTAAAATCCATATATATACCAAAGAAGAAGTGGAGAAGATGACATTTGGGATGATGACCAATGATGATACTCATAGCTGTTTGGATCAGGCACCAGTTATTATTGAACCTTCAAAGTCTTCCTCAGTTGGTCAGCCAGATTATTCTCCAACAGTAGTTAGAGTCTAA
Protein sequence

>Msa0643530

MEIDLNNEVIEVEKNALCHKECEKGFCFCVSCLSPSTCSSSSSTSPLVSSSYLELWHACAGPLTSLPKKGNAVVYFPQGHLEQFASFSPFKQLEIPNYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDDEGDGGSLTKSTPHMFCKTLTVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVNQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESIVGNQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPVSIGTRFKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDEDTETNHQDRVSPWEIDLSSPQPPLSIQSSPRLKKPRTGLLVTSPNHLITGMNPNAGISGMMGFEESVRSPKVLQGQENTGFMSLYYGCDKVTNQPGFELSTSSHHQNLASTGIGKVVTSSELMSVNPFSYAGFMESNNFPRVLQGQEICKLKSLSGKADFNIGAWGTKPSFQSACFPYGDIDKANQANIFSSKHTNFMSDNVPFNTPSIVAGNIRKEVGRSGSNLLPDEHKLQDNVSASASLGDTDINAPNDKNVKGKANSCKLFGFPLSGEPGSQNLQNTAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTFGMMTNDDTHSCLDQAPVIIEPSKSSSVGQPDYSPTVVRV*